-
1
-
-
0034610814
-
The language of covalent histone modifications
-
Strahl B.D., Allis C.D. The language of covalent histone modifications. Nature 2000, 403:41-45.
-
(2000)
Nature
, vol.403
, pp. 41-45
-
-
Strahl, B.D.1
Allis, C.D.2
-
2
-
-
0035839136
-
Translating the histone code
-
Jenuwein T., Allis C.D. Translating the histone code. Science 2001, 293:1074-1080.
-
(2001)
Science
, vol.293
, pp. 1074-1080
-
-
Jenuwein, T.1
Allis, C.D.2
-
4
-
-
33845417885
-
The cancer epigenome-components and functional correlates
-
Ting A.H., McGarvey K.M., Baylin S.B. The cancer epigenome-components and functional correlates. Genes Dev 2006, 20:3215-3231.
-
(2006)
Genes Dev
, vol.20
, pp. 3215-3231
-
-
Ting, A.H.1
McGarvey, K.M.2
Baylin, S.B.3
-
5
-
-
33646882068
-
Polycomb complexes repress developmental regulators in murine embryonic stem cells
-
Boyer L.A., Plath K., Zeitlinger J., Brambrink T., Medeiros L.A., Lee T.I., Levine S.S., Wernig M., Tajonar A., Ray M.K., Bell G.W., Otte A.P., Vidal M., Gifford D.K., Young R.A., Jaenisch R. Polycomb complexes repress developmental regulators in murine embryonic stem cells. Nature 2006, 441:349-353.
-
(2006)
Nature
, vol.441
, pp. 349-353
-
-
Boyer, L.A.1
Plath, K.2
Zeitlinger, J.3
Brambrink, T.4
Medeiros, L.A.5
Lee, T.I.6
Levine, S.S.7
Wernig, M.8
Tajonar, A.9
Ray, M.K.10
Bell, G.W.11
Otte, A.P.12
Vidal, M.13
Gifford, D.K.14
Young, R.A.15
Jaenisch, R.16
-
6
-
-
33646865180
-
Control of developmental regulators by Polycomb in human embryonic stem cells
-
Lee T.I., Jenner R.G., Boyer L.A., Guenther M.G., Levine S.S., Kumar R.M., Chevalier B., Johnstone S.E., Cole M.F., Isono K., Koseki H., Fuchikami T., Abe K., Murray H.L., Zucker J.P., Yuan B., Bell G.W., Herbolsheimer E., Hannett N.M., Sun K., Odom D.T., Otte A.P., Volkert T.L., Bartel D.P., Melton D.A., Gifford D.K., Jaenisch R., Young R.A. Control of developmental regulators by Polycomb in human embryonic stem cells. Cell 2006, 125:301-313.
-
(2006)
Cell
, vol.125
, pp. 301-313
-
-
Lee, T.I.1
Jenner, R.G.2
Boyer, L.A.3
Guenther, M.G.4
Levine, S.S.5
Kumar, R.M.6
Chevalier, B.7
Johnstone, S.E.8
Cole, M.F.9
Isono, K.10
Koseki, H.11
Fuchikami, T.12
Abe, K.13
Murray, H.L.14
Zucker, J.P.15
Yuan, B.16
Bell, G.W.17
Herbolsheimer, E.18
Hannett, N.M.19
Sun, K.20
Odom, D.T.21
Otte, A.P.22
Volkert, T.L.23
Bartel, D.P.24
Melton, D.A.25
Gifford, D.K.26
Jaenisch, R.27
Young, R.A.28
more..
-
7
-
-
22844457491
-
DNA methylation and human disease
-
Robertson K.D. DNA methylation and human disease. Nat Rev Genet 2005, 6:597-610.
-
(2005)
Nat Rev Genet
, vol.6
, pp. 597-610
-
-
Robertson, K.D.1
-
10
-
-
34548252291
-
Nuclear receptor coregulators: judges, juries, and executioners of cellular regulation
-
Lonard D.M., O'Malley B.W. Nuclear receptor coregulators: judges, juries, and executioners of cellular regulation. Mol Cell 2007, 27:691-700.
-
(2007)
Mol Cell
, vol.27
, pp. 691-700
-
-
Lonard, D.M.1
O'Malley, B.W.2
-
11
-
-
70350537033
-
Nuclear receptor coregulators in cancer biology
-
O'Malley B.W., Kumar R. Nuclear receptor coregulators in cancer biology. Cancer Res 2009, 69:8217-8222.
-
(2009)
Cancer Res
, vol.69
, pp. 8217-8222
-
-
O'Malley, B.W.1
Kumar, R.2
-
12
-
-
75649135910
-
Deconstructing repression: evolving models of co-repressor action
-
Perissi V., Jepsen K., Glass C.K., Rosenfeld M.G. Deconstructing repression: evolving models of co-repressor action. Nat Rev Genet 2010, 11:109-123.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 109-123
-
-
Perissi, V.1
Jepsen, K.2
Glass, C.K.3
Rosenfeld, M.G.4
-
13
-
-
49349115664
-
CCAR1, a key regulator of mediator complex recruitment to nuclear receptor transcription complexes
-
Kim J.H., Yang C.K., Heo K., Roeder R.G., An W., Stallcup M.R. CCAR1, a key regulator of mediator complex recruitment to nuclear receptor transcription complexes. Mol Cell 2008, 31:510-519.
-
(2008)
Mol Cell
, vol.31
, pp. 510-519
-
-
Kim, J.H.1
Yang, C.K.2
Heo, K.3
Roeder, R.G.4
An, W.5
Stallcup, M.R.6
-
14
-
-
0029817669
-
Role of CBP/P300 in nuclear receptor signalling
-
Chakravarti D., LaMorte V.J., Nelson M.C., Nakajima T., Schulman I.G., Juguilon H., Montminy M., Evans R.M. Role of CBP/P300 in nuclear receptor signalling. Nature 1996, 383:99-103.
-
(1996)
Nature
, vol.383
, pp. 99-103
-
-
Chakravarti, D.1
LaMorte, V.J.2
Nelson, M.C.3
Nakajima, T.4
Schulman, I.G.5
Juguilon, H.6
Montminy, M.7
Evans, R.M.8
-
15
-
-
0030480969
-
The CBP co-activator is a histone acetyltransferase
-
Bannister A.J., Kouzarides T. The CBP co-activator is a histone acetyltransferase. Nature 1996, 384:641-643.
-
(1996)
Nature
, vol.384
, pp. 641-643
-
-
Bannister, A.J.1
Kouzarides, T.2
-
16
-
-
0030740253
-
Nuclear receptor coactivator ACTR is a novel histone acetyltransferase and forms a multimeric activation complex with P/CAF and CBP/p300
-
Chen H., Lin R.J., Schiltz R.L., Chakravarti D., Nash A., Nagy L., Privalsky M.L., Nakatani Y., Evans R.M. Nuclear receptor coactivator ACTR is a novel histone acetyltransferase and forms a multimeric activation complex with P/CAF and CBP/p300. Cell 1997, 90:569-580.
-
(1997)
Cell
, vol.90
, pp. 569-580
-
-
Chen, H.1
Lin, R.J.2
Schiltz, R.L.3
Chakravarti, D.4
Nash, A.5
Nagy, L.6
Privalsky, M.L.7
Nakatani, Y.8
Evans, R.M.9
-
17
-
-
0030768745
-
Steroid receptor coactivator-1 is a histone acetyltransferase
-
Spencer T.E., Jenster G., Burcin M.M., Allis C.D., Zhou J., Mizzen C.A., McKenna N.J., Onate S.A., Tsai S.Y., Tsai M.J., O'Malley B.W. Steroid receptor coactivator-1 is a histone acetyltransferase. Nature 1997, 389:194-198.
-
(1997)
Nature
, vol.389
, pp. 194-198
-
-
Spencer, T.E.1
Jenster, G.2
Burcin, M.M.3
Allis, C.D.4
Zhou, J.5
Mizzen, C.A.6
McKenna, N.J.7
Onate, S.A.8
Tsai, S.Y.9
Tsai, M.J.10
O'Malley, B.W.11
-
18
-
-
0030986236
-
A signature motif in transcriptional co-activators mediates binding to nuclear receptors
-
Heery D.M., Kalkhoven E., Hoare S., Parker M.G. A signature motif in transcriptional co-activators mediates binding to nuclear receptors. Nature 1997, 387:733-736.
-
(1997)
Nature
, vol.387
, pp. 733-736
-
-
Heery, D.M.1
Kalkhoven, E.2
Hoare, S.3
Parker, M.G.4
-
19
-
-
0033821409
-
Glucocorticoid receptor recruitment of histone deacetylase 2 inhibits interleukin-1beta-induced histone H4 acetylation on lysines 8 and 12
-
Ito K., Barnes P.J., Adcock I.M. Glucocorticoid receptor recruitment of histone deacetylase 2 inhibits interleukin-1beta-induced histone H4 acetylation on lysines 8 and 12. Mol Cell Biol 2000, 20:6891-6903.
-
(2000)
Mol Cell Biol
, vol.20
, pp. 6891-6903
-
-
Ito, K.1
Barnes, P.J.2
Adcock, I.M.3
-
20
-
-
0035800524
-
Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor
-
Wang H., Huang Z.Q., Xia L., Feng Q., Erdjument-Bromage H., Strahl B.D., Briggs S.D., Allis C.D., Wong J., Tempst P., Zhang Y. Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor. Science 2001, 293:853-857.
-
(2001)
Science
, vol.293
, pp. 853-857
-
-
Wang, H.1
Huang, Z.Q.2
Xia, L.3
Feng, Q.4
Erdjument-Bromage, H.5
Strahl, B.D.6
Briggs, S.D.7
Allis, C.D.8
Wong, J.9
Tempst, P.10
Zhang, Y.11
-
21
-
-
0242665681
-
Methylation at lysine 4 of histone H3 in ecdysone-dependent development of Drosophila
-
Sedkov Y., Cho E., Petruk S., Cherbas L., Smith S.T., Jones R.S., Cherbas P., Canaani E., Jaynes J.B., Mazo A. Methylation at lysine 4 of histone H3 in ecdysone-dependent development of Drosophila. Nature 2003, 426:78-83.
-
(2003)
Nature
, vol.426
, pp. 78-83
-
-
Sedkov, Y.1
Cho, E.2
Petruk, S.3
Cherbas, L.4
Smith, S.T.5
Jones, R.S.6
Cherbas, P.7
Canaani, E.8
Jaynes, J.B.9
Mazo, A.10
-
22
-
-
11144332565
-
Histone demethylation mediated by the nuclear amine oxidase homolog LSD1
-
Shi Y., Lan F., Matson C., Mulligan P., Whetstine J.R., Cole P.A., Casero R.A. Histone demethylation mediated by the nuclear amine oxidase homolog LSD1. Cell 2004, 119:941-953.
-
(2004)
Cell
, vol.119
, pp. 941-953
-
-
Shi, Y.1
Lan, F.2
Matson, C.3
Mulligan, P.4
Whetstine, J.R.5
Cole, P.A.6
Casero, R.A.7
-
23
-
-
33646124469
-
Reversal of histone lysine trimethylation by the JMJD2 family of histone demethylases
-
Whetstine J.R., Nottke A., Lan F., Huarte M., Smolikov S., Chen Z., Spooner E., Li E., Zhang G., Colaiacovo M., Shi Y. Reversal of histone lysine trimethylation by the JMJD2 family of histone demethylases. Cell 2006, 125:467-481.
-
(2006)
Cell
, vol.125
, pp. 467-481
-
-
Whetstine, J.R.1
Nottke, A.2
Lan, F.3
Huarte, M.4
Smolikov, S.5
Chen, Z.6
Spooner, E.7
Li, E.8
Zhang, G.9
Colaiacovo, M.10
Shi, Y.11
-
24
-
-
24144462170
-
LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription
-
Metzger E., Wissmann M., Yin N., Muller J.M., Schneider R., Peters A.H., Gunther T., Buettner R., Schule R. LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription. Nature 2005, 437:436-439.
-
(2005)
Nature
, vol.437
, pp. 436-439
-
-
Metzger, E.1
Wissmann, M.2
Yin, N.3
Muller, J.M.4
Schneider, R.5
Peters, A.H.6
Gunther, T.7
Buettner, R.8
Schule, R.9
-
25
-
-
33847392500
-
Cooperative demethylation by JMJD2C and LSD1 promotes androgen receptor-dependent gene expression
-
Wissmann M., Yin N., Muller J.M., Greschik H., Fodor B.D., Jenuwein T., Vogler C., Schneider R., Gunther T., Buettner R., Metzger E., Schule R. Cooperative demethylation by JMJD2C and LSD1 promotes androgen receptor-dependent gene expression. Nat Cell Biol 2007, 9:347-353.
-
(2007)
Nat Cell Biol
, vol.9
, pp. 347-353
-
-
Wissmann, M.1
Yin, N.2
Muller, J.M.3
Greschik, H.4
Fodor, B.D.5
Jenuwein, T.6
Vogler, C.7
Schneider, R.8
Gunther, T.9
Buettner, R.10
Metzger, E.11
Schule, R.12
-
26
-
-
64749111074
-
Role of Jhdm2a in regulating metabolic gene expression and obesity resistance
-
Tateishi K., Okada Y., Kallin E.M., Zhang Y. Role of Jhdm2a in regulating metabolic gene expression and obesity resistance. Nature 2009, 458:757-761.
-
(2009)
Nature
, vol.458
, pp. 757-761
-
-
Tateishi, K.1
Okada, Y.2
Kallin, E.M.3
Zhang, Y.4
-
27
-
-
5444233785
-
A nuclear isoform of the focal adhesion LIM-domain protein Trip6 integrates activating and repressing signals at AP-1- and NF-kappaB-regulated promoters
-
Kassel O., Schneider S., Heilbock C., Litfin M., Gottlicher M., Herrlich P. A nuclear isoform of the focal adhesion LIM-domain protein Trip6 integrates activating and repressing signals at AP-1- and NF-kappaB-regulated promoters. Genes Dev 2004, 18:2518-2528.
-
(2004)
Genes Dev
, vol.18
, pp. 2518-2528
-
-
Kassel, O.1
Schneider, S.2
Heilbock, C.3
Litfin, M.4
Gottlicher, M.5
Herrlich, P.6
-
28
-
-
0037080483
-
E2F integrates cell cycle progression with DNA repair, replication, and G(2)/M checkpoints
-
Ren B., Cam H., Takahashi Y., Volkert T., Terragni J., Young R.A., Dynlacht B.D. E2F integrates cell cycle progression with DNA repair, replication, and G(2)/M checkpoints. Genes Dev 2002, 16:245-256.
-
(2002)
Genes Dev
, vol.16
, pp. 245-256
-
-
Ren, B.1
Cam, H.2
Takahashi, Y.3
Volkert, T.4
Terragni, J.5
Young, R.A.6
Dynlacht, B.D.7
-
29
-
-
23844519339
-
A high-resolution map of active promoters in the human genome
-
Kim T.H., Barrera L.O., Zheng M., Qu C., Singer M.A., Richmond T.A., Wu Y., Green R.D., Ren B. A high-resolution map of active promoters in the human genome. Nature 2005, 436:876-880.
-
(2005)
Nature
, vol.436
, pp. 876-880
-
-
Kim, T.H.1
Barrera, L.O.2
Zheng, M.3
Qu, C.4
Singer, M.A.5
Richmond, T.A.6
Wu, Y.7
Green, R.D.8
Ren, B.9
-
30
-
-
22144486551
-
Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1
-
Carroll J.S., Liu X.S., Brodsky A.S., Li W., Meyer C.A., Szary A.J., Eeckhoute J., Shao W., Hestermann E.V., Geistlinger T.R., Fox E.A., Silver P.A., Brown M. Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1. Cell 2005, 122:33-43.
-
(2005)
Cell
, vol.122
, pp. 33-43
-
-
Carroll, J.S.1
Liu, X.S.2
Brodsky, A.S.3
Li, W.4
Meyer, C.A.5
Szary, A.J.6
Eeckhoute, J.7
Shao, W.8
Hestermann, E.V.9
Geistlinger, T.R.10
Fox, E.A.11
Silver, P.A.12
Brown, M.13
-
31
-
-
55749095056
-
PPARgamma and C/EBP factors orchestrate adipocyte biology via adjacent binding on a genome-wide scale
-
Lefterova M.I., Zhang Y., Steger D.J., Schupp M., Schug J., Cristancho A., Feng D., Zhuo D., Stoeckert C.J., Liu X.S., Lazar M.A. PPARgamma and C/EBP factors orchestrate adipocyte biology via adjacent binding on a genome-wide scale. Genes Dev 2008, 22:2941-2952.
-
(2008)
Genes Dev
, vol.22
, pp. 2941-2952
-
-
Lefterova, M.I.1
Zhang, Y.2
Steger, D.J.3
Schupp, M.4
Schug, J.5
Cristancho, A.6
Feng, D.7
Zhuo, D.8
Stoeckert, C.J.9
Liu, X.S.10
Lazar, M.A.11
-
32
-
-
34547633677
-
Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing
-
Robertson G., Hirst M., Bainbridge M., Bilenky M., Zhao Y., Zeng T., Euskirchen G., Bernier B., Varhol R., Delaney A., Thiessen N., Griffith O.L., He A., Marra M., Snyder M., Jones S. Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing. Nat Methods 2007, 4:651-657.
-
(2007)
Nat Methods
, vol.4
, pp. 651-657
-
-
Robertson, G.1
Hirst, M.2
Bainbridge, M.3
Bilenky, M.4
Zhao, Y.5
Zeng, T.6
Euskirchen, G.7
Bernier, B.8
Varhol, R.9
Delaney, A.10
Thiessen, N.11
Griffith, O.L.12
He, A.13
Marra, M.14
Snyder, M.15
Jones, S.16
-
33
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
Mikkelsen T.S., Ku M., Jaffe D.B., Issac B., Lieberman E., Giannoukos G., Alvarez P., Brockman W., Kim T.K., Koche R.P., Lee W., Mendenhall E., O'Donovan A., Presser A., Russ C., Xie X., Meissner A., Wernig M., Jaenisch R., Nusbaum C., Lander E.S., Bernstein B.E. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature 2007, 448:553-560.
-
(2007)
Nature
, vol.448
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
Giannoukos, G.6
Alvarez, P.7
Brockman, W.8
Kim, T.K.9
Koche, R.P.10
Lee, W.11
Mendenhall, E.12
O'Donovan, A.13
Presser, A.14
Russ, C.15
Xie, X.16
Meissner, A.17
Wernig, M.18
Jaenisch, R.19
Nusbaum, C.20
Lander, E.S.21
Bernstein, B.E.22
more..
-
34
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
Barski A., Cuddapah S., Cui K., Roh T.Y., Schones D.E., Wang Z., Wei G., Chepelev I., Zhao K. High-resolution profiling of histone methylations in the human genome. Cell 2007, 129:823-837.
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.Y.4
Schones, D.E.5
Wang, Z.6
Wei, G.7
Chepelev, I.8
Zhao, K.9
-
35
-
-
58049191558
-
Chromatin signatures in multipotent human hematopoietic stem cells indicate the fate of bivalent genes during differentiation
-
Cui K., Zang C., Roh T.Y., Schones D.E., Childs R.W., Peng W., Zhao K. Chromatin signatures in multipotent human hematopoietic stem cells indicate the fate of bivalent genes during differentiation. Cell Stem Cell 2009, 4:80-93.
-
(2009)
Cell Stem Cell
, vol.4
, pp. 80-93
-
-
Cui, K.1
Zang, C.2
Roh, T.Y.3
Schones, D.E.4
Childs, R.W.5
Peng, W.6
Zhao, K.7
-
36
-
-
34548434716
-
Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells
-
Pan G., Tian S., Nie J., Yang C., Ruotti V., Wei H., Jonsdottir G.A., Stewart R., Thomson J.A. Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells. Cell Stem Cell 2007, 1:299-312.
-
(2007)
Cell Stem Cell
, vol.1
, pp. 299-312
-
-
Pan, G.1
Tian, S.2
Nie, J.3
Yang, C.4
Ruotti, V.5
Wei, H.6
Jonsdottir, G.A.7
Stewart, R.8
Thomson, J.A.9
-
37
-
-
34548424709
-
Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells
-
Zhao X.D., Han X., Chew J.L., Liu J., Chiu K.P., Choo A., Orlov Y.L., Sung W.K., Shahab A., Kuznetsov V.A., Bourque G., Oh S., Ruan Y., Ng H.H., Wei C.L. Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells. Cell Stem Cell 2007, 1:286-298.
-
(2007)
Cell Stem Cell
, vol.1
, pp. 286-298
-
-
Zhao, X.D.1
Han, X.2
Chew, J.L.3
Liu, J.4
Chiu, K.P.5
Choo, A.6
Orlov, Y.L.7
Sung, W.K.8
Shahab, A.9
Kuznetsov, V.A.10
Bourque, G.11
Oh, S.12
Ruan, Y.13
Ng, H.H.14
Wei, C.L.15
-
38
-
-
46249112085
-
Combinatorial patterns of histone acetylations and methylations in the human genome
-
Wang Z., Zang C., Rosenfeld J.A., Schones D.E., Barski A., Cuddapah S., Cui K., Roh T.Y., Peng W., Zhang M.Q., Zhao K. Combinatorial patterns of histone acetylations and methylations in the human genome. Nat Genet 2008, 40:897-903.
-
(2008)
Nat Genet
, vol.40
, pp. 897-903
-
-
Wang, Z.1
Zang, C.2
Rosenfeld, J.A.3
Schones, D.E.4
Barski, A.5
Cuddapah, S.6
Cui, K.7
Roh, T.Y.8
Peng, W.9
Zhang, M.Q.10
Zhao, K.11
-
39
-
-
70450217879
-
Human DNA methylomes at base resolution show widespread epigenomic differences
-
Lister R., Pelizzola M., Dowen R.H., Hawkins R.D., Hon G., Tonti-Filippini J., Nery J.R., Lee L., Ye Z., Ngo Q.M., Edsall L., Antosiewicz-Bourget J., Stewart R., Ruotti V., Millar A.H., Thomson J.A., Ren B., Ecker J.R. Human DNA methylomes at base resolution show widespread epigenomic differences. Nature 2009, 462:315-322.
-
(2009)
Nature
, vol.462
, pp. 315-322
-
-
Lister, R.1
Pelizzola, M.2
Dowen, R.H.3
Hawkins, R.D.4
Hon, G.5
Tonti-Filippini, J.6
Nery, J.R.7
Lee, L.8
Ye, Z.9
Ngo, Q.M.10
Edsall, L.11
Antosiewicz-Bourget, J.12
Stewart, R.13
Ruotti, V.14
Millar, A.H.15
Thomson, J.A.16
Ren, B.17
Ecker, J.R.18
-
40
-
-
21744435965
-
Controlling nuclear receptors: the circular logic of cofactor cycles
-
Perissi V., Rosenfeld M.G. Controlling nuclear receptors: the circular logic of cofactor cycles. Nat Rev Mol Cell Biol 2005, 6:542-554.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, pp. 542-554
-
-
Perissi, V.1
Rosenfeld, M.G.2
-
41
-
-
55749101777
-
Genome-wide profiling of PPARgamma:RXR and RNA polymerase II occupancy reveals temporal activation of distinct metabolic pathways and changes in RXR dimer composition during adipogenesis
-
Nielsen R., Pedersen T.A., Hagenbeek D., Moulos P., Siersbaek R., Megens E., Denissov S., Borgesen M., Francoijs K.J., Mandrup S., Stunnenberg H.G. Genome-wide profiling of PPARgamma:RXR and RNA polymerase II occupancy reveals temporal activation of distinct metabolic pathways and changes in RXR dimer composition during adipogenesis. Genes Dev 2008, 22:2953-2967.
-
(2008)
Genes Dev
, vol.22
, pp. 2953-2967
-
-
Nielsen, R.1
Pedersen, T.A.2
Hagenbeek, D.3
Moulos, P.4
Siersbaek, R.5
Megens, E.6
Denissov, S.7
Borgesen, M.8
Francoijs, K.J.9
Mandrup, S.10
Stunnenberg, H.G.11
-
42
-
-
77950634721
-
Cell-specific determinants of peroxisome proliferator-activated receptor gamma function in adipocytes and macrophages
-
Lefterova M.I., Steger D.J., Zhuo D., Qatanani M., Mullican S.E., Tuteja G., Manduchi E., Grant G.R., Lazar M.A. Cell-specific determinants of peroxisome proliferator-activated receptor gamma function in adipocytes and macrophages. Mol Cell Biol 2010, 30:2078-2089.
-
(2010)
Mol Cell Biol
, vol.30
, pp. 2078-2089
-
-
Lefterova, M.I.1
Steger, D.J.2
Zhuo, D.3
Qatanani, M.4
Mullican, S.E.5
Tuteja, G.6
Manduchi, E.7
Grant, G.R.8
Lazar, M.A.9
-
43
-
-
77957220857
-
Comparative epigenomic analysis of murine and human adipogenesis
-
Mikkelsen T.S., Xu Z., Zhang X., Wang L., Gimble J.M., Lander E.S., Rosen E.D. Comparative epigenomic analysis of murine and human adipogenesis. Cell 2010, 143:156-169.
-
(2010)
Cell
, vol.143
, pp. 156-169
-
-
Mikkelsen, T.S.1
Xu, Z.2
Zhang, X.3
Wang, L.4
Gimble, J.M.5
Lander, E.S.6
Rosen, E.D.7
-
44
-
-
77952331646
-
Propagation of adipogenic signals through an epigenomic transition state
-
Steger D.J., Grant G.R., Schupp M., Tomaru T., Lefterova M.I., Schug J., Manduchi E., Stoeckert C.J., Lazar M.A. Propagation of adipogenic signals through an epigenomic transition state. Genes Dev 2010, 24:1035-1044.
-
(2010)
Genes Dev
, vol.24
, pp. 1035-1044
-
-
Steger, D.J.1
Grant, G.R.2
Schupp, M.3
Tomaru, T.4
Lefterova, M.I.5
Schug, J.6
Manduchi, E.7
Stoeckert, C.J.8
Lazar, M.A.9
-
45
-
-
67649208317
-
Coactivator function defines the active estrogen receptor alpha cistrome
-
Lupien M., Eeckhoute J., Meyer C.A., Krum S.A., Rhodes D.R., Liu X.S., Brown M. Coactivator function defines the active estrogen receptor alpha cistrome. Mol Cell Biol 2009, 29:3413-3423.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 3413-3423
-
-
Lupien, M.1
Eeckhoute, J.2
Meyer, C.A.3
Krum, S.A.4
Rhodes, D.R.5
Liu, X.S.6
Brown, M.7
-
46
-
-
34447519218
-
Genomic analyses of transcription factor binding, histone acetylation, and gene expression reveal mechanistically distinct classes of estrogen-regulated promoters
-
Kininis M., Chen B.S., Diehl A.G., Isaacs G.D., Zhang T., Siepel A.C., Clark A.G., Kraus W.L. Genomic analyses of transcription factor binding, histone acetylation, and gene expression reveal mechanistically distinct classes of estrogen-regulated promoters. Mol Cell Biol 2007, 27:5090-5104.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 5090-5104
-
-
Kininis, M.1
Chen, B.S.2
Diehl, A.G.3
Isaacs, G.D.4
Zhang, T.5
Siepel, A.C.6
Clark, A.G.7
Kraus, W.L.8
-
47
-
-
75149194937
-
Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer
-
Ross-Innes C.S., Stark R., Holmes K.A., Schmidt D., Spyrou C., Russell R., Massie C.E., Vowler S.L., Eldridge M., Carroll J.S. Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer. Genes Dev 2010, 24:171-182.
-
(2010)
Genes Dev
, vol.24
, pp. 171-182
-
-
Ross-Innes, C.S.1
Stark, R.2
Holmes, K.A.3
Schmidt, D.4
Spyrou, C.5
Russell, R.6
Massie, C.E.7
Vowler, S.L.8
Eldridge, M.9
Carroll, J.S.10
-
48
-
-
77949977555
-
Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages
-
Ghisletti S., Barozzi I., Mietton F., Polletti S., De Santa F., Venturini E., Gregory L., Lonie L., Chew A., Wei C.L., Ragoussis J., Natoli G. Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages. Immunity 2010, 32:317-328.
-
(2010)
Immunity
, vol.32
, pp. 317-328
-
-
Ghisletti, S.1
Barozzi, I.2
Mietton, F.3
Polletti, S.4
De Santa, F.5
Venturini, E.6
Gregory, L.7
Lonie, L.8
Chew, A.9
Wei, C.L.10
Ragoussis, J.11
Natoli, G.12
-
49
-
-
55049107572
-
Unique ERalpha cistromes control cell type-specific gene regulation
-
Krum S.A., Miranda-Carboni G.A., Lupien M., Eeckhoute J., Carroll J.S., Brown M. Unique ERalpha cistromes control cell type-specific gene regulation. Mol Endocrinol 2008, 22:2393-2406.
-
(2008)
Mol Endocrinol
, vol.22
, pp. 2393-2406
-
-
Krum, S.A.1
Miranda-Carboni, G.A.2
Lupien, M.3
Eeckhoute, J.4
Carroll, J.S.5
Brown, M.6
-
50
-
-
40849085514
-
FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription
-
Lupien M., Eeckhoute J., Meyer C.A., Wang Q., Zhang Y., Li W., Carroll J.S., Liu X.S., Brown M. FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription. Cell 2008, 132:958-970.
-
(2008)
Cell
, vol.132
, pp. 958-970
-
-
Lupien, M.1
Eeckhoute, J.2
Meyer, C.A.3
Wang, Q.4
Zhang, Y.5
Li, W.6
Carroll, J.S.7
Liu, X.S.8
Brown, M.9
-
51
-
-
61849119137
-
Cell-type selective chromatin remodeling defines the active subset of FOXA1-bound enhancers
-
Eeckhoute J., Lupien M., Meyer C.A., Verzi M.P., Shivdasani R.A., Liu X.S., Brown M. Cell-type selective chromatin remodeling defines the active subset of FOXA1-bound enhancers. Genome Res 2009, 19:372-380.
-
(2009)
Genome Res
, vol.19
, pp. 372-380
-
-
Eeckhoute, J.1
Lupien, M.2
Meyer, C.A.3
Verzi, M.P.4
Shivdasani, R.A.5
Liu, X.S.6
Brown, M.7
-
52
-
-
77950262538
-
Nucleosome dynamics define transcriptional enhancers
-
He H.H., Meyer C.A., Shin H., Bailey S.T., Wei G., Wang Q., Zhang Y., Xu K., Ni M., Lupien M., Mieczkowski P., Lieb J.D., Zhao K., Brown M., Liu X.S. Nucleosome dynamics define transcriptional enhancers. Nat Genet 2010, 42:343-347.
-
(2010)
Nat Genet
, vol.42
, pp. 343-347
-
-
He, H.H.1
Meyer, C.A.2
Shin, H.3
Bailey, S.T.4
Wei, G.5
Wang, Q.6
Zhang, Y.7
Xu, K.8
Ni, M.9
Lupien, M.10
Mieczkowski, P.11
Lieb, J.D.12
Zhao, K.13
Brown, M.14
Liu, X.S.15
-
53
-
-
40649106738
-
Interaction of the glucocorticoid receptor with the chromatin landscape
-
John S., Sabo P.J., Johnson T.A., Sung M.H., Biddie S.C., Lightman S.L., Voss T.C., Davis S.R., Meltzer P.S., Stamatoyannopoulos J.A., Hager G.L. Interaction of the glucocorticoid receptor with the chromatin landscape. Mol Cell 2008, 29:611-624.
-
(2008)
Mol Cell
, vol.29
, pp. 611-624
-
-
John, S.1
Sabo, P.J.2
Johnson, T.A.3
Sung, M.H.4
Biddie, S.C.5
Lightman, S.L.6
Voss, T.C.7
Davis, S.R.8
Meltzer, P.S.9
Stamatoyannopoulos, J.A.10
Hager, G.L.11
-
54
-
-
0025043959
-
The t(15;17) translocation of acute promyelocytic leukaemia fuses the retinoic acid receptor alpha gene to a novel transcribed locus
-
de The H., Chomienne C., Lanotte M., Degos L., Dejean A. The t(15;17) translocation of acute promyelocytic leukaemia fuses the retinoic acid receptor alpha gene to a novel transcribed locus. Nature 1990, 347:558-561.
-
(1990)
Nature
, vol.347
, pp. 558-561
-
-
de The, H.1
Chomienne, C.2
Lanotte, M.3
Degos, L.4
Dejean, A.5
-
55
-
-
0025780876
-
Chromosomal translocation t(15;17) in human acute promyelocytic leukemia fuses RAR alpha with a novel putative transcription factor
-
Kakizuka A., Miller W.H., Umesono K., Warrell R.P., Frankel S.R., Murty V.V., Dmitrovsky E., Evans R.M. Chromosomal translocation t(15;17) in human acute promyelocytic leukemia fuses RAR alpha with a novel putative transcription factor. PML, Cell 1991, 66:663-674.
-
(1991)
PML, Cell
, vol.66
, pp. 663-674
-
-
Kakizuka, A.1
Miller, W.H.2
Umesono, K.3
Warrell, R.P.4
Frankel, S.R.5
Murty, V.V.6
Dmitrovsky, E.7
Evans, R.M.8
-
56
-
-
77953135667
-
The molecular signature of oncofusion proteins in acute myeloid leukemia
-
Martens J.H., Stunnenberg H.G. The molecular signature of oncofusion proteins in acute myeloid leukemia. FEBS Lett 2010, 584:2662-2669.
-
(2010)
FEBS Lett
, vol.584
, pp. 2662-2669
-
-
Martens, J.H.1
Stunnenberg, H.G.2
-
57
-
-
76249101323
-
PML-RARalpha/RXR alters the epigenetic landscape in acute promyelocytic leukemia
-
Martens J.H., Brinkman A.B., Simmer F., Francoijs K.J., Nebbioso A., Ferrara F., Altucci L., Stunnenberg H.G. PML-RARalpha/RXR alters the epigenetic landscape in acute promyelocytic leukemia. Cancer Cell 2010, 17:173-185.
-
(2010)
Cancer Cell
, vol.17
, pp. 173-185
-
-
Martens, J.H.1
Brinkman, A.B.2
Simmer, F.3
Francoijs, K.J.4
Nebbioso, A.5
Ferrara, F.6
Altucci, L.7
Stunnenberg, H.G.8
-
58
-
-
34247389322
-
Diversity of TMPRSS2-ERG fusion transcripts in the human prostate
-
Clark J., Merson S., Jhavar S., Flohr P., Edwards S., Foster C.S., Eeles R., Martin F.L., Phillips D.H., Crundwell M., Christmas T., Thompson A., Fisher C., Kovacs G., Cooper C.S. Diversity of TMPRSS2-ERG fusion transcripts in the human prostate. Oncogene 2007, 26:2667-2673.
-
(2007)
Oncogene
, vol.26
, pp. 2667-2673
-
-
Clark, J.1
Merson, S.2
Jhavar, S.3
Flohr, P.4
Edwards, S.5
Foster, C.S.6
Eeles, R.7
Martin, F.L.8
Phillips, D.H.9
Crundwell, M.10
Christmas, T.11
Thompson, A.12
Fisher, C.13
Kovacs, G.14
Cooper, C.S.15
-
59
-
-
33845329915
-
TMPRSS2:ERG fusion by translocation or interstitial deletion is highly relevant in androgen-dependent prostate cancer, but is bypassed in late-stage androgen receptor-negative prostate cancer
-
Hermans K.G., van Marion R., van Dekken H., Jenster G., van Weerden W.M., Trapman J. TMPRSS2:ERG fusion by translocation or interstitial deletion is highly relevant in androgen-dependent prostate cancer, but is bypassed in late-stage androgen receptor-negative prostate cancer. Cancer Res 2006, 66:10658-10663.
-
(2006)
Cancer Res
, vol.66
, pp. 10658-10663
-
-
Hermans, K.G.1
van Marion, R.2
van Dekken, H.3
Jenster, G.4
van Weerden, W.M.5
Trapman, J.6
-
60
-
-
77952103123
-
An integrated network of androgen receptor, polycomb, and TMPRSS2-ERG gene fusions in prostate cancer progression
-
Yu J., Mani R.S., Cao Q., Brenner C.J., Cao X., Wang X., Wu L., Li J., Hu M., Gong Y., Cheng H., Laxman B., Vellaichamy A., Shankar S., Li Y., Dhanasekaran S.M., Morey R., Barrette T., Lonigro R.J., Tomlins S.A., Varambally S., Qin Z.S., Chinnaiyan A.M. An integrated network of androgen receptor, polycomb, and TMPRSS2-ERG gene fusions in prostate cancer progression. Cancer Cell 2010, 17:443-454.
-
(2010)
Cancer Cell
, vol.17
, pp. 443-454
-
-
Yu, J.1
Mani, R.S.2
Cao, Q.3
Brenner, C.J.4
Cao, X.5
Wang, X.6
Wu, L.7
Li, J.8
Hu, M.9
Gong, Y.10
Cheng, H.11
Laxman, B.12
Vellaichamy, A.13
Shankar, S.14
Li, Y.15
Dhanasekaran, S.M.16
Morey, R.17
Barrette, T.18
Lonigro, R.J.19
Tomlins, S.A.20
Varambally, S.21
Qin, Z.S.22
Chinnaiyan, A.M.23
more..
|