메뉴 건너뛰기




Volumn 436, Issue 7052, 2005, Pages 876-880

A high-resolution map of active promoters in the human genome

Author keywords

[No Author keywords available]

Indexed keywords

CELLS; COMPLEXATION; CYTOLOGY; ENZYME IMMOBILIZATION; GENETIC ENGINEERING; RNA;

EID: 23844519339     PISSN: 00280836     EISSN: None     Source Type: Journal    
DOI: 10.1038/nature03877     Document Type: Article
Times cited : (773)

References (30)
  • 1
    • 0043269205 scopus 로고    scopus 로고
    • The RNA polymerase II core promoter
    • Smale, S. T. & Kadonaga, J. T. The RNA polymerase II core promoter. Annu. Rev. Biochem. 72, 449-479 (2003).
    • (2003) Annu. Rev. Biochem. , vol.72 , pp. 449-479
    • Smale, S.T.1    Kadonaga, J.T.2
  • 2
    • 0028337542 scopus 로고
    • Transcriptional activation: A complex puzzle with few easy pieces
    • Tjian, R. & Maniatis, T. Transcriptional activation: a complex puzzle with few easy pieces. Cell 77, 5-8 (1994).
    • (1994) Cell , vol.77 , pp. 5-8
    • Tjian, R.1    Maniatis, T.2
  • 3
    • 0038664127 scopus 로고    scopus 로고
    • Identification and functional analysis of human transcriptional promoters
    • Trinklein, N. D., Aldred, S. J., Saldanha, A. J. & Myers, R. M. Identification and functional analysis of human transcriptional promoters. Genome Res. 13, 308-312 (2003).
    • (2003) Genome Res. , vol.13 , pp. 308-312
    • Trinklein, N.D.1    Aldred, S.J.2    Saldanha, A.J.3    Myers, R.M.4
  • 4
    • 0032450480 scopus 로고    scopus 로고
    • The RNA polymerase II general transcription factors: Past, present, and future
    • Reinberg, D. et al. The RNA polymerase II general transcription factors: past, present, and future. Cold Spring Harb. Symp. Quant. Biol. 63, 83-103 (1998).
    • (1998) Cold Spring Harb. Symp. Quant. Biol. , vol.63 , pp. 83-103
    • Reinberg, D.1
  • 5
    • 0034704248 scopus 로고    scopus 로고
    • Genome-wide location and function of DNA binding proteins
    • Ren, B. et al. Genome-wide location and function of DNA binding proteins. Science 290, 2306-2309 (2000).
    • (2000) Science , vol.290 , pp. 2306-2309
    • Ren, B.1
  • 6
    • 22344435841 scopus 로고    scopus 로고
    • Direct isolation and identification of promoters in the human genome
    • Kim, T. H. et al. Direct isolation and identification of promoters in the human genome. Genome Res. 15, 830-839 (2005).
    • (2005) Genome Res. , vol.15 , pp. 830-839
    • Kim, T.H.1
  • 7
    • 7444260846 scopus 로고    scopus 로고
    • The ENCODE Project Consortium, The ENCODE (ENCyclopedia Of DNA Elements) Project. Science 306, 636-640 (2004).
    • (2004) Science , vol.306 , pp. 636-640
  • 8
    • 0032846163 scopus 로고    scopus 로고
    • Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array
    • Singh-Gasson, S. et al. Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array. Nature Biotechnol. 17, 974-978 (1999).
    • (1999) Nature Biotechnol. , vol.17 , pp. 974-978
    • Singh-Gasson, S.1
  • 9
    • 0027526618 scopus 로고
    • II250: A TBP-associated factor implicated in cell-cycle regulation
    • II250: a TBP-associated factor implicated in cell-cycle regulation. Nature 362, 175-179 (1993).
    • (1993) Nature , vol.362 , pp. 175-179
    • Ruppert, S.1    Wang, E.H.2    Tjian, R.3
  • 10
    • 0347756647 scopus 로고    scopus 로고
    • DBTSS, DataBase of Transcriptional Start Sites: Progress report 2004
    • Suzuki, Y., Yamashita, R., Sugano, S. & Nakai, K. DBTSS, DataBase of Transcriptional Start Sites: progress report 2004. Nucleic Acids Res. 32 (database issue), D78-81 (2004).
    • (2004) Nucleic Acids Res. , vol.32 , Issue.DATABASE ISSUE
    • Suzuki, Y.1    Yamashita, R.2    Sugano, S.3    Nakai, K.4
  • 11
    • 0037251892 scopus 로고    scopus 로고
    • NCBI Reference Sequence project: Update and current status
    • Pruitt, K. D., Tatusova, T. & Maglott, D. R. NCBI Reference Sequence project: update and current status. Nucleic Acids Res. 31, 34-37 (2003).
    • (2003) Nucleic Acids Res. , vol.31 , pp. 34-37
    • Pruitt, K.D.1    Tatusova, T.2    Maglott, D.R.3
  • 13
    • 9144259164 scopus 로고    scopus 로고
    • Ensembl 2004
    • Birney, E. et al. Ensembl 2004. Nucleic Acids Res. 32 (database issue), D468-470 (2004).
    • (2004) Nucleic Acids Res. , vol.32 , Issue.DATABASE ISSUE
    • Birney, E.1
  • 14
    • 0027141519 scopus 로고
    • Number of CpG islands and genes in human and mouse
    • Antequera, F. & Bird, A. Number of CpG islands and genes in human and mouse. Proc. Natl. Acad. Sci. USA 90, 11995-11999 (1993).
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 11995-11999
    • Antequera, F.1    Bird, A.2
  • 15
    • 0012253746 scopus 로고    scopus 로고
    • Computational analysis of core promoters in the Drosophila genome
    • RESEARCH0087
    • Ohler, U., Liao, G. C., Niemann, H. & Rubin, G. M. Computational analysis of core promoters in the Drosophila genome. Genome Biol. 3, RESEARCH0087 (2002).
    • (2002) Genome Biol. , vol.3
    • Ohler, U.1    Liao, G.C.2    Niemann, H.3    Rubin, G.M.4
  • 16
    • 2642570305 scopus 로고    scopus 로고
    • The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote
    • Schubeler, D. et al. The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote. Genes Dev. 18, 1263-1271 (2004).
    • (2004) Genes Dev. , vol.18 , pp. 1263-1271
    • Schubeler, D.1
  • 17
    • 0347755643 scopus 로고    scopus 로고
    • The microRNA Registry
    • Griffiths-Jones, S. The microRNA Registry. Nucleic Acids Res. 32 (database issue), D109-111 (2004).
    • (2004) Nucleic Acids Res. , vol.32 , Issue.DATABASE ISSUE
    • Griffiths-Jones, S.1
  • 18
    • 7244245762 scopus 로고    scopus 로고
    • Finishing the euchromatic sequence of the human genome
    • International Human Genome Sequencing Consortium, Finishing the euchromatic sequence of the human genome. Nature 431, 931-945 (2004).
    • (2004) Nature , vol.431 , pp. 931-945
  • 19
    • 19944376457 scopus 로고    scopus 로고
    • Global identification of human transcribed sequences with genome tiling arrays
    • Bertone, P. et al. Global identification of human transcribed sequences with genome tiling arrays. Science 306, 2242-2246 (2004).
    • (2004) Science , vol.306 , pp. 2242-2246
    • Bertone, P.1
  • 20
    • 12144287461 scopus 로고    scopus 로고
    • Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22
    • Kampa, D. et al. Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22. Genome Res. 14, 331-342 (2004).
    • (2004) Genome Res. , vol.14 , pp. 331-342
    • Kampa, D.1
  • 21
    • 0036246030 scopus 로고    scopus 로고
    • Using the transcriptome to annotate the genome
    • Saha, S. et al. Using the transcriptome to annotate the genome. Nature Biotechnol. 20, 508-512 (2002).
    • (2002) Nature Biotechnol. , vol.20 , pp. 508-512
    • Saha, S.1
  • 22
    • 0037442493 scopus 로고    scopus 로고
    • The transcriptional activity of human chromosome 22
    • Rinn, J. L. et al. The transcriptional activity of human chromosome 22. Genes Dev. 17, 529-540 (2003).
    • (2003) Genes Dev. , vol.17 , pp. 529-540
    • Rinn, J.L.1
  • 23
    • 0037007048 scopus 로고    scopus 로고
    • Large-scale analysis of the human and mouse transcriptomes
    • Su, A. I. et al. Large-scale analysis of the human and mouse transcriptomes. Proc. Natl Acad. Sci. USA 99, 4465-4470 (2002).
    • (2002) Proc. Natl Acad. Sci. USA , vol.99 , pp. 4465-4470
    • Su, A.I.1
  • 24
    • 0003328368 scopus 로고    scopus 로고
    • Evidence for large domains of similarly expressed genes in the Drosophila genome
    • Spellman, P. T. & Rubin, G. M. Evidence for large domains of similarly expressed genes in the Drosophila genome. J. Biol. 1, 5 (2002).
    • (2002) J. Biol. , vol.1 , pp. 5
    • Spellman, P.T.1    Rubin, G.M.2
  • 25
    • 0037194732 scopus 로고    scopus 로고
    • Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans
    • Roy, P. J., Stuart, J. M., Lund, J. & Kim, S. K. Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans. Nature 418, 975-979 (2002).
    • (2002) Nature , vol.418 , pp. 975-979
    • Roy, P.J.1    Stuart, J.M.2    Lund, J.3    Kim, S.K.4
  • 26
    • 0035895502 scopus 로고    scopus 로고
    • The human transcriptome map: Clustering of highly expressed genes in chromosomal domains
    • Caron, H. et al. The human transcriptome map: clustering of highly expressed genes in chromosomal domains. Science 291, 1289-1292 (2001).
    • (2001) Science , vol.291 , pp. 1289-1292
    • Caron, H.1
  • 27
    • 0037041395 scopus 로고    scopus 로고
    • An extensive network of coupling among gene expression machines
    • Maniatis, T. & Reed, R. An extensive network of coupling among gene expression machines. Nature 416, 499-506 (2002).
    • (2002) Nature , vol.416 , pp. 499-506
    • Maniatis, T.1    Reed, R.2
  • 28
    • 0028924386 scopus 로고
    • Promoter-proximal pausing of RNA polymerase II defines a general rate-limiting step after transcription initiation
    • Krumm, A., Hickey, L. B. & Groudine, M. Promoter-proximal pausing of RNA polymerase II defines a general rate-limiting step after transcription initiation. Genes Dev. 9, 559-572 (1995).
    • (1995) Genes Dev. , vol.9 , pp. 559-572
    • Krumm, A.1    Hickey, L.B.2    Groudine, M.3
  • 29
    • 4644309196 scopus 로고    scopus 로고
    • The functions of animal microRNAs
    • Ambros, V. The functions of animal microRNAs. Nature 431, 350-355 (2004).
    • (2004) Nature , vol.431 , pp. 350-355
    • Ambros, V.1
  • 30
    • 0032549745 scopus 로고    scopus 로고
    • Genomic cis-regulatory logic: Experimental and computational analysis of a sea urchin gene
    • Yuh, C. H., Bolouri, H. & Davidson, E. H. Genomic cis-regulatory logic: experimental and computational analysis of a sea urchin gene. Science 279, 1896-1902 (1998).
    • (1998) Science , vol.279 , pp. 1896-1902
    • Yuh, C.H.1    Bolouri, H.2    Davidson, E.H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.