-
1
-
-
79955473684
-
OPERating on chromatin, a colorful language where context matters
-
Gardner K.E., Allis C.D., and Strahl B.D. OPERating ON chromatin, a colorful language where context matters J. Mol. Biol. 2011 [Epub ahead of print]
-
(2011)
J. Mol. Biol.
-
-
Gardner, K.E.1
Allis, C.D.2
Strahl, B.D.3
-
2
-
-
0035839136
-
Translating the histone code
-
DOI 10.1126/science.1063127
-
Jenuwein T., and Allis C.D. Translating the histone code Science 293 2001 1074 1080 (Pubitemid 32758077)
-
(2001)
Science
, vol.293
, Issue.5532
, pp. 1074-1080
-
-
Jenuwein, T.1
Allis, C.D.2
-
3
-
-
78650722823
-
Physiological roles of class i HDAC complex and histone demethylase
-
Hayakawa T., and Nakayama J. Physiological roles of class I HDAC complex and histone demethylase J. Biomed. Biotechnol. 2011 2011 129383
-
(2011)
J. Biomed. Biotechnol.
, vol.2011
, pp. 129383
-
-
Hayakawa, T.1
Nakayama, J.2
-
5
-
-
11244271837
-
Sin3: A flexible regulator of global gene expression and genome stability
-
DOI 10.1007/s00294-004-0541-5
-
Silverstein R.A., and Ekwall K. Sin3: a flexible regulator of global gene expression and genome stability Curr. Genet. 47 2005 1 17 (Pubitemid 40069110)
-
(2005)
Current Genetics
, vol.47
, Issue.1
, pp. 1-17
-
-
Silverstein, R.A.1
Ekwall, K.2
-
6
-
-
55949085986
-
Keeping things quiet: Roles of NuRD and Sin3 co-repressor complexes during mammalian development
-
McDonel P., Costello I., and Hendrich B. Keeping things quiet: roles of NuRD and Sin3 co-repressor complexes during mammalian development Int. J. Biochem. Cell Biol. 41 2009 108 116
-
(2009)
Int. J. Biochem. Cell Biol.
, vol.41
, pp. 108-116
-
-
McDonel, P.1
Costello, I.2
Hendrich, B.3
-
7
-
-
56049120057
-
Eloquent silence: Developmental functions of Class I histone deacetylases
-
DOI 10.1016/j.gde.2008.10.001, PII S0959437X08001391
-
Cunliffe V.T. Eloquent silence: developmental functions of Class I histone deacetylases Curr. Opin. Genet. Dev. 18 2008 404 410 (Pubitemid 50308559)
-
(2008)
Current Opinion in Genetics and Development
, vol.18
, Issue.5
, pp. 404-410
-
-
Cunliffe, V.T.1
-
8
-
-
27744577727
-
Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription
-
DOI 10.1016/j.cell.2005.10.023, PII S0092867405011566
-
Carrozza M.J., Li B., Florens L., Suganuma T., Swanson S.K., and Lee K.K. Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription Cell 123 2005 581 592 (Pubitemid 41608462)
-
(2005)
Cell
, vol.123
, Issue.4
, pp. 581-592
-
-
Carrozza, M.J.1
Li, B.2
Florens, L.3
Suganuma, T.4
Swanson, S.K.5
Lee, K.K.6
Shia, W.-J.7
Anderson, S.8
Yates, J.9
Washburn, M.P.10
Workman, J.L.11
-
9
-
-
34249099730
-
Combined action of PHD and chromo domains directs the Rpd3S HDAC to transcribed chromatin
-
DOI 10.1126/science.1139004
-
Li B., Gogol M., Carey M., Lee D., Seidel C., and Workman J.L. Combined action of PHD and chromo domains directs the Rpd3S HDAC to transcribed chromatin Science 316 2007 1050 1054 (Pubitemid 46799495)
-
(2007)
Science
, vol.316
, Issue.5827
, pp. 1050-1054
-
-
Li, B.1
Gogol, M.2
Carey, M.3
Lee, D.4
Seidel, C.5
Workman, J.L.6
-
10
-
-
65549095078
-
Histone H3 lysine 36 dimethylation (H3K36me2) is sufficient to recruit the Rpd3s histone deacetylase complex and to repress spurious transcription
-
Li B., Jackson J., Simon M.D., Fleharty B., Gogol M., and Seidel C. Histone H3 lysine 36 dimethylation (H3K36me2) is sufficient to recruit the Rpd3s histone deacetylase complex and to repress spurious transcription J. Biol. Chem. 284 2009 7970 7976
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 7970-7976
-
-
Li, B.1
Jackson, J.2
Simon, M.D.3
Fleharty, B.4
Gogol, M.5
Seidel, C.6
-
11
-
-
78751697249
-
A novel mammalian complex containing Sin3B mitigates histone acetylation and RNA polymerase II progression within transcribed loci
-
Jelinic P., Pellegrino J., and David G. A novel mammalian complex containing Sin3B mitigates histone acetylation and RNA polymerase II progression within transcribed loci Mol. Cell. Biol. 31 2011 54 62
-
(2011)
Mol. Cell. Biol.
, vol.31
, pp. 54-62
-
-
Jelinic, P.1
Pellegrino, J.2
David, G.3
-
12
-
-
34247609855
-
Distinct roles of HDAC complexes in promoter silencing, antisense suppression and DNA damage protection
-
DOI 10.1038/nsmb1239, PII NSMB1239
-
Nicolas E., Yamada T., Cam H.P., Fitzgerald P.C., Kobayashi R., and Grewal S.I. Distinct roles of HDAC complexes in promoter silencing, antisense suppression and DNA damage protection Nat. Struct. Mol. Biol. 14 2007 372 380 (Pubitemid 46685888)
-
(2007)
Nature Structural and Molecular Biology
, vol.14
, Issue.5
, pp. 372-380
-
-
Nicolas, E.1
Yamada, T.2
Cam, H.P.3
FitzGerald, P.C.4
Kobayashi, R.5
Grewal, S.I.S.6
-
13
-
-
29144468972
-
Eaf3 chromodomain interaction with methylated H3-K36 links histone deacetylation to pol II elongation
-
DOI 10.1016/j.molcel.2005.11.021, PII S1097276505018083
-
Joshi A.A., and Struhl K. Eaf3 chromodomain interaction with methylated H3-K36 links histone deacetylation to Pol II elongation Mol. Cell 20 2005 971 978 (Pubitemid 41814885)
-
(2005)
Molecular Cell
, vol.20
, Issue.6
, pp. 971-978
-
-
Joshi, A.A.1
Struhl, K.2
-
14
-
-
27744471474
-
Stable incorporation of sequence specific repressors Ash1 and Ume6 into the Rpd3L complex
-
DOI 10.1016/j.bbaexp.2005.09.005, PII S0167478105002496
-
Carrozza M.J., Florens L., Swanson S.K., Shia W.J., Anderson S., and Yates J. Stable incorporation of sequence specific repressors Ash1 and Ume6 into the Rpd3L complex Biochim. Biophys. Acta 1731 2005 77 87 Discussion 75-76 (Pubitemid 41712766)
-
(2005)
Biochimica et Biophysica Acta - Gene Structure and Expression
, vol.1731
, Issue.2
, pp. 77-87
-
-
Carrozza, M.J.1
Florens, L.2
Swanson, S.K.3
Shia, W.-J.4
Anderson, S.5
Yates, J.6
Washburn, M.P.7
Workman, J.L.8
-
15
-
-
0038642016
-
Identification and characterization of three new components of the mSin3A corepressor complex
-
DOI 10.1128/MCB.23.10.3456-3467.2003
-
Fleischer T.C., Yun U.J., and Ayer D.E. Identification and characterization of three new components of the mSin3A corepressor complex Mol. Cell. Biol. 23 2003 3456 3467 (Pubitemid 36539178)
-
(2003)
Molecular and Cellular Biology
, vol.23
, Issue.10
, pp. 3456-3467
-
-
Fleischer, T.C.1
Yun, U.J.2
Ayer, D.E.3
-
16
-
-
0032088533
-
SAP30, a novel protein conserved between human and yeast, is a component of a histone deacetylase complex
-
Zhang Y., Sun Z.W., Iratni R., Erdjument-Bromage H., Tempst P., Hampsey M., and Reinberg D. SAP30, a novel protein conserved between human and yeast, is a component of a histone deacetylase complex Mol. Cell 1 1998 1021 1031 (Pubitemid 128379263)
-
(1998)
Molecular Cell
, vol.1
, Issue.7
, pp. 1021-1031
-
-
Zhang, Y.1
Sun, Z.-W.2
Iratni, R.3
Erdjument-Bromage, H.4
Tempst, P.5
Hampsey, M.6
Reinberg, D.7
-
17
-
-
0030969516
-
Histone deacetylases associated with the mSin3 corepressor mediate Mad transcriptional repression
-
DOI 10.1016/S0092-8674(00)80215-9
-
Laherty C.D., Yang W.M., Sun J.M., Davie J.R., Seto E., and Eisenman R.N. Histone deacetylases associated with the mSin3 corepressor mediate Mad transcriptional repression Cell 89 1997 349 356 (Pubitemid 27220879)
-
(1997)
Cell
, vol.89
, Issue.3
, pp. 349-356
-
-
Laherty, C.D.1
Yang, W.-M.2
Jian-Min, S.3
Davie, J.R.4
Seto, E.5
Eisenman, R.N.6
-
18
-
-
0034967002
-
Pf1, a novel PHD zinc finger protein that links the TLE corepressor to the mSin3A-histone deacetylase complex
-
DOI 10.1128/MCB.21.13.4110-4118.2001
-
Yochum G.S., and Ayer D.E. Pf1, a novel PHD zinc finger protein that links the TLE corepressor to the mSin3A-histone deacetylase complex Mol. Cell. Biol. 21 2001 4110 4118 (Pubitemid 32565293)
-
(2001)
Molecular and Cellular Biology
, vol.21
, Issue.13
, pp. 4110-4118
-
-
Yochum, G.S.1
Ayer, D.E.2
-
19
-
-
0036841723
-
Role for the mortality factors MORF4, MRGX, and MRG15 in transcriptional repression via associations with Pf1, mSin3A, and transducin-like enhancer of split
-
DOI 10.1128/MCB.22.22.7868-7876.2002
-
Yochum G.S., and Ayer D.E. Role for the mortality factors MORF4, MRGX, and MRG15 in transcriptional repression via associations with Pf1, mSin3A, and transducin-like enhancer of split Mol. Cell. Biol. 22 2002 7868 7876 (Pubitemid 35217297)
-
(2002)
Molecular and Cellular Biology
, vol.22
, Issue.22
, pp. 7868-7876
-
-
Yochum, G.S.1
Ayer, D.E.2
-
20
-
-
61349131438
-
Molecular basis of the interaction of Saccharomyces cerevisiae Eaf3 chromo domain with methylated H3K36
-
Sun B., Hong J., Zhang P., Dong X., Shen X., Lin D., and Ding J. Molecular basis of the interaction of Saccharomyces cerevisiae Eaf3 chromo domain with methylated H3K36 J. Biol. Chem. 283 2008 36504 36512
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 36504-36512
-
-
Sun, B.1
Hong, J.2
Zhang, P.3
Dong, X.4
Shen, X.5
Lin, D.6
Ding, J.7
-
21
-
-
55249111484
-
Structural basis for the recognition of methylated histone H3K36 by the Eaf3 subunit of histone deacetylase complex Rpd3S
-
Xu C., Cui G., Botuyan M.V., and Mer G. Structural basis for the recognition of methylated histone H3K36 by the Eaf3 subunit of histone deacetylase complex Rpd3S Structure 16 2008 1740 1750
-
(2008)
Structure
, vol.16
, pp. 1740-1750
-
-
Xu, C.1
Cui, G.2
Botuyan, M.V.3
Mer, G.4
-
22
-
-
0032451007
-
The Mad protein family links transcriptional repression to cell differentiation
-
McArthur G.A., Laherty C.D., Queva C., Hurlin P.J., Loo L., and James L. The Mad protein family links transcriptional repression to cell differentiation Cold Spring Harbor Symp. Quant. Biol. 63 1998 423 433 (Pubitemid 29282187)
-
(1998)
Cold Spring Harbor Symposia on Quantitative Biology
, vol.63
, pp. 423-433
-
-
McArthur, G.A.1
Laherty, C.D.2
Queva, C.3
Hurlin, P.J.4
Loo, L.5
James, L.6
Grandori, C.7
Gallant, P.8
Shiio, Y.9
Hokanson, W.C.10
Bush, A.C.11
Cheng, P.F.12
Lawrence, Q.A.13
Pulverer, B.14
Koskinen, P.J.15
Foley, K.P.16
Aver, D.E.17
Eisenman, R.N.18
-
23
-
-
0032192408
-
Repression by the Mad(Mxi1)-Sin3 complex
-
DOI 10.100 2/(SI CI)1521-18 78(19981 0)20:10<80 8::AID-BIE S6>3.0.CO;2-U
-
Schreiber-Agus N., and DePinho R.A. Repression by the Mad(Mxi1)-Sin3 complex BioEssays 20 1998 808 818 (Pubitemid 28486017)
-
(1998)
BioEssays
, vol.20
, Issue.10
, pp. 808-818
-
-
Schreiber-Agus, N.1
DePinho, R.A.2
-
24
-
-
3542998064
-
HBP1 and Mad1 repressors bind the Sin3 corepressor PAH2 domain with opposite helical orientations
-
DOI 10.1038/nsmb798
-
Swanson K.A., Knoepfler P.S., Huang K., Kang R.S., Cowley S.M., and Laherty C.D. HBP1 and Mad1 repressors bind the Sin3 corepressor PAH2 domain with opposite helical orientations Nat. Struct. Mol. Biol. 11 2004 738 746 (Pubitemid 39014499)
-
(2004)
Nature Structural and Molecular Biology
, vol.11
, Issue.8
, pp. 738-746
-
-
Swanson, K.A.1
Knoepfler, P.S.2
Huang, K.3
Kang, R.S.4
Cowley, S.M.5
Laherty, C.D.6
Eisenman, R.N.7
Radhakrishnan, I.8
-
25
-
-
0034954161
-
A conserved α-helical motif mediates the interaction of Sp1-like transcriptional repressors with the corepressor mSin3A
-
DOI 10.1128/MCB.21.15.5041-5049.2001
-
Zhang J.S., Moncrieffe M.C., Kaczynski J., Ellenrieder V., Prendergast F.G., and Urrutia R. A conserved α-helical motif mediates the interaction of Sp1-like transcriptional repressors with the corepressor mSin3A Mol. Cell. Biol. 21 2001 5041 5049 (Pubitemid 32656401)
-
(2001)
Molecular and Cellular Biology
, vol.21
, Issue.15
, pp. 5041-5049
-
-
Zhang, J.-S.1
Moncrieffe, M.C.2
Kaczynski, J.3
Ellenrieder, V.4
Prendergast, F.G.5
Urrutia, R.6
-
26
-
-
0034800012
-
The Smad transcriptional corepressor TGIF recruits mSin3
-
Wotton D., Knoepfler P.S., Laherty C.D., Eisenman R.N., and Massague J. The Smad transcriptional corepressor TGIF recruits mSin3 Cell Growth Differ. 12 2001 457 463 (Pubitemid 32906090)
-
(2001)
Cell Growth and Differentiation
, vol.12
, Issue.9
, pp. 457-463
-
-
Wotton, D.1
Knoepfler, P.S.2
Laherty, C.D.3
Eisenman, R.N.4
Massague, J.5
-
27
-
-
0033598827
-
Neural restrictive silencer factor recruits mSin3 and histone deacetylase complex to repress neuron-specific target genes
-
Naruse Y., Aoki T., Kojima T., and Mori N. Neural restrictive silencer factor recruits mSin3 and histone deacetylase complex to repress neuron-specific target genes Proc. Natl Acad. Sci. USA 96 1999 13691 13696
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 13691-13696
-
-
Naruse, Y.1
Aoki, T.2
Kojima, T.3
Mori, N.4
-
28
-
-
0033306577
-
Transcriptional repression by REST: Recruitment of Sin3A and histone deacetylase to neuronal genes
-
DOI 10.1038/13165
-
Huang Y., Myers S.J., and Dingledine R. Transcriptional repression by REST: recruitment of Sin3A and histone deacetylase to neuronal genes Nat. Neurosci. 2 1999 867 872 (Pubitemid 30602598)
-
(1999)
Nature Neuroscience
, vol.2
, Issue.10
, pp. 867-872
-
-
Huang, Y.1
Myers, S.J.2
Dingledine, R.3
-
30
-
-
20744438918
-
Myt1 family recruits histone deacetylase to regulate neural transcription
-
DOI 10.1111/j.1471-4159.2005.03131.x
-
Romm E., Nielsen J.A., Kim J.G., and Hudson L.D. Myt1 family recruits histone deacetylase to regulate neural transcription J. Neurochem. 93 2005 1444 1453 (Pubitemid 40853267)
-
(2005)
Journal of Neurochemistry
, vol.93
, Issue.6
, pp. 1444-1453
-
-
Romm, E.1
Nielsen, J.A.2
Kim, J.G.3
Hudson, L.D.4
-
31
-
-
0034650839
-
The winged-helix/forkhead protein myocyte nuclear factor β (MNF-β) forms a co-repressor complex with mammalian Sin3B
-
DOI 10.1042/0264-6021:3450335
-
Yang Q., Kong Y., Rothermel B., Garry D.J., Bassel-Duby R., and Williams R.S. The winged-helix/forkhead protein myocyte nuclear factor β (MNF-β) forms a co-repressor complex with mammalian sin3B Biochem. J. 345 2000 335 343 (Pubitemid 30077174)
-
(2000)
Biochemical Journal
, vol.345
, Issue.2
, pp. 335-343
-
-
Yang, Q.1
Kong, Y.2
Rothermel, B.3
Garry, D.J.4
Bassel-Duby, R.5
Williams, R.S.6
-
32
-
-
0033997967
-
The ETO protein disrupted in t(8;21)-associated acute myeloid leukemia is a corepressor for the promyelocytic leukemia zinc finger protein
-
DOI 10.1128/MCB.20.6.2075-2086.2000
-
Melnick A.M., Westendorf J.J., Polinger A., Carlile G.W., Arai S., and Ball H.J. The ETO protein disrupted in t(8;21)-associated acute myeloid leukemia is a corepressor for the promyelocytic leukemia zinc finger protein Mol. Cell. Biol. 20 2000 2075 2086 (Pubitemid 30123823)
-
(2000)
Molecular and Cellular Biology
, vol.20
, Issue.6
, pp. 2075-2086
-
-
Melnick, A.M.1
Westendorf, J.J.2
Polinger, A.3
Carlile, G.W.4
Arai, S.5
Ball, H.J.6
Lutterbach, B.7
Hiebert, S.W.8
Licht, J.D.9
-
33
-
-
0141885136
-
Menin, a tumor suppressor, represses JunD-mediated transcriptional activity by association with an mSin3A-histone deacetylase complex
-
Kim H., Lee J.E., Cho E.J., Liu J.O., and Youn H.D. Menin, a tumor suppressor, represses JunD-mediated transcriptional activity by association with an mSin3A-histone deacetylase complex Cancer Res. 63 2003 6135 6139 (Pubitemid 37255151)
-
(2003)
Cancer Research
, vol.63
, Issue.19
, pp. 6135-6139
-
-
Kim, H.1
Lee, J.-E.2
Cho, E.-J.3
Liu, J.O.4
Youn, H.-D.5
-
34
-
-
8644288177
-
Stage-specific repression by the EKLF transcriptional activator
-
DOI 10.1128/MCB.24.23.10416-10424.2004
-
Chen X., and Bieker J.J. Stage-specific repression by the EKLF transcriptional activator Mol. Cell. Biol. 24 2004 10416 10424 (Pubitemid 39507878)
-
(2004)
Molecular and Cellular Biology
, vol.24
, Issue.23
, pp. 10416-10424
-
-
Chen, X.1
Bieker, J.J.2
-
35
-
-
0032110706
-
SAP30, a component of the mSin3 corepressor complex involved in N-CoR-mediated repression by specific transcription factors
-
Laherty C.D., Billin A.N., Lavinsky R.M., Yochum G.S., Bush A.C., and Sun J.M. SAP30, a component of the mSin3 corepressor complex involved in N-CoR-mediated repression by specific transcription factors Mol. Cell 2 1998 33 42 (Pubitemid 128378964)
-
(1998)
Molecular Cell
, vol.2
, Issue.1
, pp. 33-42
-
-
Laherty, C.D.1
Billin, A.N.2
Lavinsky, R.M.3
Yochum, G.S.4
Bush, A.C.5
Sun, J.-M.6
Mullen, T.-M.7
Davie, J.R.8
Rose, D.W.9
Glass, C.K.10
Rosenfeld, M.G.11
Ayer, D.E.12
Eisenman, R.N.13
-
36
-
-
37549011826
-
Conserved themes in target recognition by the PAH1 and PAH2 domains of the Sin3 transcriptional corepressor
-
Sahu S.C., Swanson K.A., Kang R.S., Huang K., Brubaker K., Ratcliff K., and Radhakrishnan I. Conserved themes in target recognition by the PAH1 and PAH2 domains of the Sin3 transcriptional corepressor J. Mol. Biol. 375 2008 1444 1456
-
(2008)
J. Mol. Biol.
, vol.375
, pp. 1444-1456
-
-
Sahu, S.C.1
Swanson, K.A.2
Kang, R.S.3
Huang, K.4
Brubaker, K.5
Ratcliff, K.6
Radhakrishnan, I.7
-
37
-
-
0033696968
-
Solution structure of the interacting domains of the Mad-Sin3 complex: Implications for recruitment of a chromatin-modifying complex
-
Brubaker K., Cowley S.M., Huang K., Loo L., Yochum G.S., and Ayer D.E. Solution structure of the interacting domains of the Mad-Sin3 complex: implications for recruitment of a chromatin-modifying complex Cell 103 2000 655 665
-
(2000)
Cell
, vol.103
, pp. 655-665
-
-
Brubaker, K.1
Cowley, S.M.2
Huang, K.3
Loo, L.4
Yochum, G.S.5
Ayer, D.E.6
-
38
-
-
0346727447
-
Extension of the Binding Motif of the Sin3 Interacting Domain of the Mad Family Proteins
-
van Ingen H., Lasonder E., Jansen J.F., Kaan A.M., Spronk C.A., Stunnenberg H.G., and Vuister G.W. Extension of the binding motif of the Sin3 interacting domain of the Mad family proteins Biochemistry 43 2004 46 54 (Pubitemid 38055941)
-
(2004)
Biochemistry
, vol.43
, Issue.1
, pp. 46-54
-
-
Van Ingen, H.1
Lasonder, E.2
Jansen, J.F.A.3
Kaan, A.M.4
Spronk, C.A.E.M.5
Stunnenberg, H.G.6
Vuister, G.W.7
-
39
-
-
0033664303
-
The Mad1-Sin3B interaction involves a novel helical fold
-
Spronk C.A., Tessari M., Kaan A.M., Jansen J.F., Vermeulen M., Stunnenberg H.G., and Vuister G.W. The Mad1-Sin3B interaction involves a novel helical fold Nat. Struct. Biol. 7 2000 1100 1104
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 1100-1104
-
-
Spronk, C.A.1
Tessari, M.2
Kaan, A.M.3
Jansen, J.F.4
Vermeulen, M.5
Stunnenberg, H.G.6
Vuister, G.W.7
-
40
-
-
28444455957
-
The neural repressor NRSF/REST binds the PAH1 domain of the Sin3 corepressor by using its distinct short hydrophobic helix
-
DOI 10.1016/j.jmb.2005.10.008, PII S0022283605012386
-
Nomura M., Uda-Tochio H., Murai K., Mori N., and Nishimura Y. The neural repressor NRSF/REST binds the PAH1 domain of the Sin3 corepressor by using its distinct short hydrophobic helix J. Mol. Biol. 354 2005 903 915 (Pubitemid 41735511)
-
(2005)
Journal of Molecular Biology
, vol.354
, Issue.4
, pp. 903-915
-
-
Nomura, M.1
Uda-Tochio, H.2
Murai, K.3
Mori, N.4
Nishimura, Y.5
-
41
-
-
33745235792
-
Coupled Unfolding and Dimerization by the PAH2 Domain of the Mammalian Sin3A Corepressor
-
DOI 10.1016/j.jmb.2006.04.069, PII S0022283606005626
-
Zhang Y., Zhang Z., Demeler B., and Radhakrishnan I. Coupled unfolding and dimerization by the PAH2 domain of the mammalian Sin3A corepressor J. Mol. Biol. 360 2006 7 14 (Pubitemid 43927816)
-
(2006)
Journal of Molecular Biology
, vol.360
, Issue.1
, pp. 7-14
-
-
Zhang, Y.1
Zhang, Z.2
Demeler, B.3
Radhakrishnan, I.4
-
42
-
-
1642415040
-
Functional Analysis of the Mad1-mSin3A Repressor-Corepressor Interaction Reveals Determinants of Specificity, Affinity, and Transcriptional Response
-
DOI 10.1128/MCB.24.7.2698-2709.2004
-
Cowley S.M., Kang R.S., Frangioni J.V., Yada J.J., DeGrand A.M., Radhakrishnan I., and Eisenman R.N. Functional analysis of the Mad1-mSin3A repressor-corepressor interaction reveals determinants of specificity, affinity, and transcriptional response Mol. Cell. Biol. 24 2004 2698 2709 (Pubitemid 38381262)
-
(2004)
Molecular and Cellular Biology
, vol.24
, Issue.7
, pp. 2698-2709
-
-
Cowley, S.M.1
Kang, R.S.2
Frangioni, J.V.3
Yada, J.J.4
DeGrand, A.M.5
Radhakrishnan, I.6
Eisenman, R.N.7
-
43
-
-
37549055027
-
Solution NMR studies of apo-mSin3A and mSin3B reveal that the PAH1 and PAH2 domains are structurally independent
-
He Y., and Radhakrishnan I. Solution NMR studies of apo-mSin3A and mSin3B reveal that the PAH1 and PAH2 domains are structurally independent Protein Sci. 17 2008 171 175
-
(2008)
Protein Sci.
, vol.17
, pp. 171-175
-
-
He, Y.1
Radhakrishnan, I.2
-
44
-
-
1342346531
-
Structural and Functional Conservation of the NuA4 Histone Acetyltransferase Complex from Yeast to Humans
-
DOI 10.1128/MCB.24.5.1884-1896.2004
-
Doyon Y., Selleck W., Lane W.S., Tan S., and Cote J. Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans Mol. Cell. Biol. 24 2004 1884 1896 (Pubitemid 38248930)
-
(2004)
Molecular and Cellular Biology
, vol.24
, Issue.5
, pp. 1884-1896
-
-
Doyon, Y.1
Selleck, W.2
Lane, W.S.3
Tan, S.4
Cote, J.5
-
45
-
-
0037184965
-
MRG15, a novel chromodomain protein, is present in two distinct multiprotein complexes involved in transcriptional activation
-
DOI 10.1074/jbc.M203839200
-
Pardo P.S., Leung J.K., Lucchesi J.C., and Pereira-Smith O.M. MRG15, a novel chromodomain protein, is present in two distinct multiprotein complexes involved in transcriptional activation J. Biol. Chem. 277 2002 50860 50866 (Pubitemid 36042252)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.52
, pp. 50860-50866
-
-
Pardo, P.S.1
Leung, J.K.2
Lucchesi, J.C.3
Pereira-Smith, O.M.4
-
46
-
-
77951181795
-
MRG15 binds directly to PALB2 and stimulates homology-directed repair of chromosomal breaks
-
Hayakawa T., Zhang F., Hayakawa N., Ohtani Y., Shinmyozu K., Nakayama J., and Andreassen P.R. MRG15 binds directly to PALB2 and stimulates homology-directed repair of chromosomal breaks J. Cell Sci. 123 2010 1124 1130
-
(2010)
J. Cell Sci.
, vol.123
, pp. 1124-1130
-
-
Hayakawa, T.1
Zhang, F.2
Hayakawa, N.3
Ohtani, Y.4
Shinmyozu, K.5
Nakayama, J.6
Andreassen, P.R.7
-
47
-
-
69249088889
-
MRG15 is a novel PALB2-interacting factor involved in homologous recombination
-
Sy S.M., Huen M.S., and Chen J. MRG15 is a novel PALB2-interacting factor involved in homologous recombination J. Biol. Chem. 284 2009 21127 21131
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 21127-21131
-
-
Sy, S.M.1
Huen, M.S.2
Chen, J.3
-
48
-
-
77149175671
-
Regulation of alternative splicing by histone modifications
-
Luco R.F., Pan Q., Tominaga K., Blencowe B.J., Pereira-Smith O.M., and Misteli T. Regulation of alternative splicing by histone modifications Science 327 2010 996 1000
-
(2010)
Science
, vol.327
, pp. 996-1000
-
-
Luco, R.F.1
Pan, Q.2
Tominaga, K.3
Blencowe, B.J.4
Pereira-Smith, O.M.5
Misteli, T.6
-
49
-
-
13244295627
-
The LxxLL motif: A multifunctional binding sequence in transcriptional regulation
-
DOI 10.1016/j.tibs.2004.12.001, PII S0968000404003007
-
Plevin M.J., Mills M.M., and Ikura M. The LxxLL motif: a multifunctional binding sequence in transcriptional regulation Trends Biochem. Sci. 30 2005 66 69 (Pubitemid 40187297)
-
(2005)
Trends in Biochemical Sciences
, vol.30
, Issue.2
, pp. 66-69
-
-
Plevin, M.J.1
Mills, M.M.2
Ikura, M.3
-
50
-
-
65549135830
-
Solution structure of a novel zinc finger motif in the SAP30 polypeptide of the Sin3 corepressor complex and its potential role in nucleic acid recognition
-
He Y., Imhoff R., Sahu A., and Radhakrishnan I. Solution structure of a novel zinc finger motif in the SAP30 polypeptide of the Sin3 corepressor complex and its potential role in nucleic acid recognition Nucleic Acids Res. 37 2009 2142 2152
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 2142-2152
-
-
He, Y.1
Imhoff, R.2
Sahu, A.3
Radhakrishnan, I.4
-
51
-
-
33749363609
-
The MRG domain of human MRG15 uses a shallow hydrophobic pocket to interact with the N-terminal region of PAM14
-
DOI 10.1110/ps.062397806
-
Zhang P., Zhao J., Wang B., Du J., Lu Y., Chen J., and Ding J. The MRG domain of human MRG15 uses a shallow hydrophobic pocket to interact with the N-terminal region of PAM14 Protein Sci. 15 2006 2423 2434 (Pubitemid 44496396)
-
(2006)
Protein Science
, vol.15
, Issue.10
, pp. 2423-2434
-
-
Zhang, P.1
Zhao, J.2
Wang, B.3
Du, J.4
Lu, Y.5
Chen, J.6
Ding, J.7
-
52
-
-
33644809447
-
Multipurpose MRG domain involved in cell senescence and proliferation exhibits structural homology to a DNA-interacting domain
-
DOI 10.1016/j.str.2005.08.019, PII S096921260500362X
-
Bowman B.R., Moure C.M., Kirtane B.M., Welschhans R.L., Tominaga K., Pereira-Smith O.M., and Quiocho F.A. Multipurpose MRG domain involved in cell senescence and proliferation exhibits structural homology to a DNA-interacting domain Structure 14 2006 151 158 (Pubitemid 43350082)
-
(2006)
Structure
, vol.14
, Issue.1
, pp. 151-158
-
-
Bowman, B.R.1
Moure, C.M.2
Kirtane, B.M.3
Welschhans, R.L.4
Tominaga, K.5
Pereira-Smith, O.M.6
Quiocho, F.A.7
-
53
-
-
0032749078
-
Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm
-
DOI 10.1006/jmbi.1999.3110
-
Wright P.E., and Dyson H.J. Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm J. Mol. Biol. 293 1999 321 331 (Pubitemid 29516173)
-
(1999)
Journal of Molecular Biology
, vol.293
, Issue.2
, pp. 321-331
-
-
Wright, P.E.1
Dyson, H.J.2
-
55
-
-
14644435825
-
Intrinsically unstructured proteins and their functions
-
DOI 10.1038/nrm1589
-
Dyson H.J., and Wright P.E. Intrinsically unstructured proteins and their functions Nat. Rev., Mol. Cell Biol. 6 2005 197 208 (Pubitemid 40314921)
-
(2005)
Nature Reviews Molecular Cell Biology
, vol.6
, Issue.3
, pp. 197-208
-
-
Dyson, H.J.1
Wright, P.E.2
-
56
-
-
0024448151
-
Calculation of protein extinction coefficients from amino acid sequence data
-
Gill S.C., and von Hippel P.H. Calculation of protein extinction coefficients from amino acid sequence data Anal. Biochem. 182 1989 319 326 (Pubitemid 19277112)
-
(1989)
Analytical Biochemistry
, vol.182
, Issue.2
, pp. 319-326
-
-
Gill, S.C.1
Von Hippel, P.H.2
-
57
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio F., Grzesiek S., Vuister G.W., Zhu G., Pfeifer J., and Bax A. NMRPipe: a multidimensional spectral processing system based on UNIX pipes J. Biomol. NMR 6 1995 277 293
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
58
-
-
0004040543
-
-
University of California, San Francisco, CA
-
Goddard, T. D. & Kneller, D. G. (2004). Sparky 3. University of California, San Francisco, CA; http://www.cgl.ucsf.edu/home/sparky/.
-
(2004)
Sparky 3
-
-
Goddard, T.D.1
Kneller, D.G.2
-
59
-
-
0033794003
-
NMR spectroscopy: A multifaceted approach to macromolecular structure
-
Ferentz A.E., and Wagner G. NMR spectroscopy: a multifaceted approach to macromolecular structure Q. Rev. Biophys. 33 2000 29 65
-
(2000)
Q. Rev. Biophys.
, vol.33
, pp. 29-65
-
-
Ferentz, A.E.1
Wagner, G.2
-
60
-
-
12044252858
-
Methodological advances in protein NMR
-
Bax A., and Grzesiek S. Methodological advances in protein NMR Acc. Chem. Res. 26 1993 131 138
-
(1993)
Acc. Chem. Res.
, vol.26
, pp. 131-138
-
-
Bax, A.1
Grzesiek, S.2
-
61
-
-
0025252231
-
1H]-NMR spectroscopy: Combined use with isotope labelling for studies of macromolecular conformation and intermolecular interactions
-
1H]-NMR spectroscopy: combined use with isotope labelling for studies of macromolecular conformation and intermolecular interactions Q. Rev. Biophys. 23 1990 39 96
-
(1990)
Q. Rev. Biophys.
, vol.23
, pp. 39-96
-
-
Otting, G.1
Wüthrich, K.2
-
62
-
-
68349093958
-
TALOS+: A hybrid method for predicting protein backbone torsion angles from NMR chemical shifts
-
Shen Y., Delaglio F., Cornilescu G., and Bax A. TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts J. Biomol. NMR 44 2009 213 223
-
(2009)
J. Biomol. NMR
, vol.44
, pp. 213-223
-
-
Shen, Y.1
Delaglio, F.2
Cornilescu, G.3
Bax, A.4
-
63
-
-
0037316363
-
ARIA: Automated NOE assignment and NMR structure calculation
-
DOI 10.1093/bioinformatics/19.2.315
-
Linge J.P., Habeck M., Rieping W., and Nilges M. ARIA: automated NOE assignment and NMR structure calculation Bioinformatics 19 2003 315 316 (Pubitemid 36181930)
-
(2003)
Bioinformatics
, vol.19
, Issue.2
, pp. 315-316
-
-
Linge, J.P.1
Habeck, M.2
Rieping, W.3
Nilges, M.4
-
64
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brunger A.T., Adams P.D., Clore G.M., DeLano W.L., Gros P., and Grosse-Kunstleve R.W. Crystallography & NMR system: a new software suite for macromolecular structure determination Acta Crystallogr., Sect. D: Biol. Crystallogr. 54 1998 905 921
-
(1998)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
-
65
-
-
0030339738
-
AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR
-
Laskowski R.A., Rullmannn J.A., MacArthur M.W., Kaptein R., and Thornton J.M. AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR J. Biomol. NMR 8 1996 477 486 (Pubitemid 126706801)
-
(1996)
Journal of Biomolecular NMR
, vol.8
, Issue.4
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmann, J.A.C.2
MacArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
66
-
-
3242892054
-
MONSTER: Inferring non-covalent interactions in macromolecular structures from atomic coordinate data
-
Salerno W.J., Seaver S.M., Armstrong B.R., and Radhakrishnan I. MONSTER: inferring non-covalent interactions in macromolecular structures from atomic coordinate data Nucleic Acids Res. 32 2004 W566 W568
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Salerno, W.J.1
Seaver, S.M.2
Armstrong, B.R.3
Radhakrishnan, I.4
-
67
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling
-
DOI 10.1002/elps.1150181505
-
Guex N., and Peitsch M.C. SWISS-MODEL and the Swiss-Pdb Viewer: an environment for comparative protein modeling Electrophoresis 18 1997 2714 2723 (Pubitemid 28059943)
-
(1997)
Electrophoresis
, vol.18
, Issue.15
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
68
-
-
0030824517
-
Ribbons
-
DOI 10.1016/S0076-6879(97)77027-7
-
Carson M. Ribbons Macromolecular Crystallography, Part B 277 1997 Academic Press Inc. San Diego, CA 493 505 (Pubitemid 27392859)
-
(1997)
Methods in Enzymology
, vol.277
, pp. 493-505
-
-
Carson, M.1
-
69
-
-
0026319199
-
Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons
-
Nicholls A., Sharp K.A., and Honig B. Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons Proteins 11 1991 281 296
-
(1991)
Proteins
, vol.11
, pp. 281-296
-
-
Nicholls, A.1
Sharp, K.A.2
Honig, B.3
|