메뉴 건너뛰기




Volumn 21, Issue 4, 2011, Pages 298-311

Epigenetic screening in product safety assessment: Are we there yet?

Author keywords

chemical safety; Epigenetics; regulatory testing; risk assessment

Indexed keywords

5 METHYLCYTOSINE; ANDROGEN; ANDROSTENEDIONE; ANTIBODY; AROMATASE; AXIN; BISULFITE; CLASTOGEN; CYTOSINE; ENDOCRINE DISRUPTOR; ESTRADIOL; ESTROGEN RECEPTOR; ESTRONE; GREEN FLUORESCENT PROTEIN; HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE; MICRORNA; OLIGOMER; RESTRICTION ENDONUCLEASE; TESTOSTERONE; THYMIDINE KINASE; UNTRANSLATED RNA; URACIL;

EID: 79954517922     PISSN: 15376516     EISSN: 15376524     Source Type: Journal    
DOI: 10.3109/15376516.2011.557883     Document Type: Review
Times cited : (29)

References (62)
  • 1
    • 64349105832 scopus 로고    scopus 로고
    • Epigenetic perspective into head and neck cancer through in silico gene expression profiling of histone lysine methyltransferases
    • Biron VL, Dort JC. 2008. Epigenetic perspective into head and neck cancer through in silico gene expression profiling of histone lysine methyltransferases. J Otolaryngol Head Neck Surg 37:366-372.
    • (2008) J Otolaryngol Head Neck Surg , vol.37 , pp. 366-372
    • Biron, V.L.1    Dort, J.C.2
  • 2
    • 77956896334 scopus 로고    scopus 로고
    • Genome-wide analysis of DNA methylation and gene expression changes in the mouse lung following subchronic arsenate exposure
    • Boellmann F, Zhang L, Clewell HJ, Schroth GP, Kenyon EM, Andersen ME, Thomas RS. 2010. Genome-wide analysis of DNA methylation and gene expression changes in the mouse lung following subchronic arsenate exposure. Toxicol Sci 117:404-417.
    • (2010) Toxicol Sci , vol.117 , pp. 404-417
    • Boellmann, F.1    Zhang, L.2    Clewell, H.J.3    Schroth, G.P.4    Kenyon, E.M.5    Andersen, M.E.6    Thomas, R.S.7
  • 4
    • 0032188992 scopus 로고    scopus 로고
    • Modulation of plasmid DNA methylation and expression in zebrafish embryos
    • DOI 10.1093/nar/26.19.4454
    • Collas P. 1998. Modulation of plasmid DNA methylation and expression in zebrafish embryos. Nucleic Acids Res 26:4454-4461. (Pubitemid 28442139)
    • (1998) Nucleic Acids Research , vol.26 , Issue.19 , pp. 4454-4461
    • Collas, P.1
  • 5
    • 0036322831 scopus 로고    scopus 로고
    • Maternal methyl supplements in mice affect epigenetic variation and DNA methylation of offspring
    • Cooney CA, Dave AA, Wolff GL. 2002. Maternal methyl supplements in mice affect epigenetic variation and DNA methylation of offspring. J Nutr 132:2393S-2400S. (Pubitemid 34848114)
    • (2002) Journal of Nutrition , vol.132 , Issue.SUPPL. 8
    • Cooney, C.A.1    Dave, A.A.2    Wolff, G.L.3
  • 6
    • 64249165694 scopus 로고    scopus 로고
    • MicroRNA regulation of cardiovascular development
    • Cordes KR, Srivastava D. 2009. MicroRNA regulation of cardiovascular development. Circ Res 104:724-732.
    • (2009) Circ Res , vol.104 , pp. 724-732
    • Cordes, K.R.1    Srivastava, D.2
  • 8
    • 77949391388 scopus 로고    scopus 로고
    • CpG methylation of a silent controlling element in the murine Avy allele is incomplete and unresponsive to methyl donor supplementation
    • Cropley JE, Suter CM, Beckman KB, Martin DI. 2010. CpG methylation of a silent controlling element in the murine Avy allele is incomplete and unresponsive to methyl donor supplementation. PLoS ONE 5:e9055.
    • (2010) PLoS ONE , vol.5
    • Cropley, J.E.1    Suter, C.M.2    Beckman, K.B.3    Martin, D.I.4
  • 9
    • 77954361095 scopus 로고    scopus 로고
    • Genetic and epigenetic regulation and expression signatures of glutathione S-transferases in developing mouse liver
    • Cui JY, Choudhuri S, Knight TR, Klaassen CD. 2010. Genetic and epigenetic regulation and expression signatures of glutathione S-transferases in developing mouse liver. Toxicol Sci 116:32-43.
    • (2010) Toxicol Sci , vol.116 , pp. 32-43
    • Cui, J.Y.1    Choudhuri, S.2    Knight, T.R.3    Klaassen, C.D.4
  • 10
    • 33646787797 scopus 로고    scopus 로고
    • Proposed mode of action for in utero effects of some phthalate esters on the developing male reproductive tract
    • David RM. 2006. Proposed mode of action for in utero effects of some phthalate esters on the developing male reproductive tract. Toxicol Pathol 34:209-219.
    • (2006) Toxicol Pathol , vol.34 , pp. 209-219
    • David, R.M.1
  • 11
    • 34047151740 scopus 로고    scopus 로고
    • Transactivation from Gal4-VP16 transgenic insertions for tissue-specific cell labeling and ablation in zebrafish
    • DOI 10.1016/j.ydbio.2007.01.033, PII S0012160607000802
    • Davison JM, Akitake CM, Goll MG, Rhee JM, Gosse N, Baier H, Halpern ME, Leach SD, Parsons MJ. 2007. Transactivation from Gal4-VP16 transgenic insertions for tissue-specific cell labeling and ablation in zebrafish. Dev Biol 304:811-824. (Pubitemid 46527582)
    • (2007) Developmental Biology , vol.304 , Issue.2 , pp. 811-824
    • Davison, J.M.1    Akitake, C.M.2    Goll, M.G.3    Rhee, J.M.4    Gosse, N.5    Baier, H.6    Halpern, M.E.7    Leach, S.D.8    Parsons, M.J.9
  • 12
    • 0031844174 scopus 로고    scopus 로고
    • Altered imprinted gene methylation and expression in completely ES cell-derived mouse fetuses: Association with aberrant phenotypes
    • Dean W, Bowden L, Aitchison A, Klose J, Moore T, Meneses JJ, Reik W, Feil R. 1998. Altered imprinted gene methylation and expression in completely ES cell-derived mouse fetuses: association with aberrant phenotypes. Development 125:2273-2282. (Pubitemid 28336388)
    • (1998) Development , vol.125 , Issue.12 , pp. 2273-2282
    • Dean, W.1    Bowden, L.2    Aitchison, A.3    Klose, J.4    Moore, T.5    Meneses, J.J.6    Reik, W.7    Feil, R.8
  • 14
    • 33645633542 scopus 로고    scopus 로고
    • Maternal genistein alters coat color and protects Avy mouse offspring from obesity by modifying the fetal epigenome
    • Dolinoy DC, Weidman JR, Waterland RA, Jirtle RL. 2006. Maternal genistein alters coat color and protects Avy mouse offspring from obesity by modifying the fetal epigenome. Environ Health Perspect 114:567-572.
    • (2006) Environ Health Perspect , vol.114 , pp. 567-572
    • Dolinoy, D.C.1    Weidman, J.R.2    Waterland, R.A.3    Jirtle, R.L.4
  • 17
    • 77958598505 scopus 로고    scopus 로고
    • Histone modifications at the blastocyst Axin1 Fu locus mark the heritability of in vitro culture-induced epigenetic alterations in mice
    • Fernandez-Gonzalez R, Ramirez MA, Pericuesta E, Calle A, Gutierrez- Adan A. 2010. Histone modifications at the blastocyst Axin1 Fu locus mark the heritability of in vitro culture-induced epigenetic alterations in mice. Biol Reprod 83:720-727.
    • (2010) Biol Reprod , vol.83 , pp. 720-727
    • Fernandez-Gonzalez, R.1    Ramirez, M.A.2    Pericuesta, E.3    Calle, A.4    Gutierrez- Adan, A.5
  • 18
    • 77954044677 scopus 로고    scopus 로고
    • Inhibition of the microRNA pathway in zebrafish by siRNA
    • Fjose A, Zhao XF. 2010. Inhibition of the microRNA pathway in zebrafish by siRNA. Methods Mol Biol 629:239-255.
    • (2010) Methods Mol Biol , vol.629 , pp. 239-255
    • Fjose, A.1    Zhao, X.F.2
  • 20
    • 77951190661 scopus 로고    scopus 로고
    • Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression
    • Git A, Dvinge H, Salmon-Divon M, Osborne M, Kutter C, Hadfield J, Bertone P, Caldas C. 2010. Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression. RNA 16:991-1006.
    • (2010) RNA , vol.16 , pp. 991-1006
    • Git, A.1    Dvinge, H.2    Salmon-Divon, M.3    Osborne, M.4    Kutter, C.5    Hadfield, J.6    Bertone, P.7    Caldas, C.8
  • 23
    • 0030888263 scopus 로고    scopus 로고
    • Identification of DNA methylation markers for human breast carcinomas using the methylation-sensitive restriction fingerprinting technique
    • Huang TH, Laux DE, Hamlin BC, Tran P, Tran H, Lubahn DB. 1997. Identification of DNA methylation markers for human breast carcinomas using the methylation-sensitive restriction fingerprinting technique. Cancer Res 57:1030-1034. (Pubitemid 27138594)
    • (1997) Cancer Research , vol.57 , Issue.6 , pp. 1030-1034
    • Huang, T.H.-M.1    Laux, D.E.2    Hamlin, B.C.3    Tran, P.4    Tran, H.5    Lubahn, D.B.6
  • 24
    • 47749136313 scopus 로고    scopus 로고
    • Stability of genomic imprinting in embryonic stem cells: Lessons from assisted reproductive technology
    • DOI 10.2174/157488808784223078
    • Huntriss J, Picton HM. 2008. Stability of genomic imprinting in embryonic stem cells: lessons from assisted reproductive technology. Curr Stem Cell Res Ther 3:107-116. (Pubitemid 352024857)
    • (2008) Current Stem Cell Research and Therapy , vol.3 , Issue.2 , pp. 107-116
    • Huntriss, J.1    Picton, H.M.2
  • 25
    • 0030743612 scopus 로고    scopus 로고
    • DNA methylation and imprinting: Why bother?
    • DOI 10.1016/S0168-9525(97)01180-3, PII S0168952597011803
    • Jaenisch R. 1997. DNA methylation and imprinting: why bother? Trends Genet 13:323-329. (Pubitemid 27309909)
    • (1997) Trends in Genetics , vol.13 , Issue.8 , pp. 323-329
    • Jaenisch, R.1
  • 28
    • 79954507953 scopus 로고    scopus 로고
    • Examination of imprinted genes as early indicators of methylation changes in response to rodent carcinogens
    • Abstract #631
    • Klapacz J, LeBaron MJ, Rasoulpour RJ, Hollnagel HM, Gollapudi BB. 2009. Examination of imprinted genes as early indicators of methylation changes in response to rodent carcinogens. Toxicologist Abstract #631.
    • (2009) Toxicologist
    • Klapacz, J.1    Lebaron, M.J.2    Rasoulpour, R.J.3    Hollnagel, H.M.4    Gollapudi, B.B.5
  • 32
    • 77955925161 scopus 로고    scopus 로고
    • MicroRNAs and their implications in toxicological research
    • Lema C, Cunningham MJ. 2010. MicroRNAs and their implications in toxicological research. Toxicol Lett 198:100-105.
    • (2010) Toxicol Lett , vol.198 , pp. 100-105
    • Lema, C.1    Cunningham, M.J.2
  • 33
    • 24644506123 scopus 로고    scopus 로고
    • Expansion of human embryonic stem cells in defined serum-free medium devoid of animal-derived products
    • DOI 10.1002/bit.20536
    • Li Y, Powell S, Brunette E, Lebkowski J, Mandalam R. 2005. Expansion of human embryonic stem cells in defined serum-free medium devoid of animal-derived products. Biotechnol Bioeng 91:688-698. (Pubitemid 41283861)
    • (2005) Biotechnology and Bioengineering , vol.91 , Issue.6 , pp. 688-698
    • Li, Y.1    Powell, S.2    Brunette, E.3    Lebkowski, J.4    Mandalam, R.5
  • 34
    • 77956030589 scopus 로고    scopus 로고
    • Chromatin states of developmentally-regulated genes revealed by DNA and histone methylation patterns in zebrafish embryos
    • Lindeman LC, Winata CL, Aanes H, Mathavan S, Alestrom P, Collas P. 2010. Chromatin states of developmentally-regulated genes revealed by DNA and histone methylation patterns in zebrafish embryos. Int J Dev Biol 54:803-813.
    • (2010) Int J Dev Biol , vol.54 , pp. 803-813
    • Lindeman, L.C.1    Winata, C.L.2    Aanes, H.3    Mathavan, S.4    Alestrom, P.5    Collas, P.6
  • 35
    • 0033199584 scopus 로고    scopus 로고
    • Transgene expression in zebrafish: A comparison of retroviral-vector and DNA-injection approaches
    • DOI 10.1006/dbio.1999.9376
    • Linney E, Hardison NL, Lonze BE, Lyons S, DiNapoli L. 1999. Transgene expression in zebrafish: a comparison of retroviral-vector and DNA-injection approaches. Dev Biol 213:207-216. (Pubitemid 29409958)
    • (1999) Developmental Biology , vol.213 , Issue.1 , pp. 207-216
    • Linney, E.1    Hardison, N.L.2    Lonze, B.E.3    Lyons, S.4    Dinapoli, L.5
  • 36
    • 4444355023 scopus 로고    scopus 로고
    • Changes in the DNA methylation profile of the rat H19 gene upstream region during development and transgenic hepatocarcinogenesis and its role in the imprinted transcriptional regulation of the H19 gene
    • DOI 10.1002/mc.20036
    • Manoharan H, Babcock K, Pitot HC. 2004. Changes in the DNA methylation profile of the rat H19 gene upstream region during development and transgenic hepatocarcinogenesis and its role in the imprinted transcriptional regulation of the H19 gene. Mol Carcinog 41:1-16. (Pubitemid 39195597)
    • (2004) Molecular Carcinogenesis , vol.41 , Issue.1 , pp. 1-16
    • Manoharan, H.1    Babcock, K.2    Pitot, H.C.3
  • 37
    • 79954479840 scopus 로고    scopus 로고
    • Endocrine disruption: Historical perspectives and its impact on the future of toxicology testing
    • Marty MS, Carney EW, Rowlands JC. 2010. Endocrine disruption: historical perspectives and its impact on the future of toxicology testing. Toxicol Sci.
    • (2010) Toxicol Sci
    • Marty, M.S.1    Carney, E.W.2    Rowlands, J.C.3
  • 38
    • 41549097799 scopus 로고    scopus 로고
    • Epigenetics: Use of in silico genome scanning by the virtual image restriction landmark method
    • DOI 10.1111/j.1742-4658.2008.06328.x
    • Matsuyama T. 2008. Epigenetics: use of in silico genome scanning by the virtual image restriction landmark method. FEBS J 275:1607. (Pubitemid 351463990)
    • (2008) FEBS Journal , vol.275 , Issue.8 , pp. 1607
    • Matsuyama, T.1
  • 39
    • 4544291383 scopus 로고    scopus 로고
    • Global changes in genomic methylation levels during early development of the zebrafish embryo
    • DOI 10.1007/s00427-004-0418-0
    • Mhanni AA, McGowan RA. 2004. Global changes in genomic methylation levels during early development of the zebrafish embryo. Dev Genes Evol 214:412-417. (Pubitemid 39236636)
    • (2004) Development Genes and Evolution , vol.214 , Issue.8 , pp. 412-417
    • Mhanni, A.A.1    McGowan, R.A.2
  • 42
  • 43
    • 77955272554 scopus 로고    scopus 로고
    • Proteome profiling of mouse embryonic stem cells to define markers for cell differentiation and embryotoxicity
    • Osman AM, van Dartel DA, Zwart E, Blokland M, Pennings JL, Piersma AH. 2010. Proteome profiling of mouse embryonic stem cells to define markers for cell differentiation and embryotoxicity. Reprod Toxicol 30:322-332.
    • (2010) Reprod Toxicol , vol.30 , pp. 322-332
    • Osman, A.M.1    Van Dartel, D.A.2    Zwart, E.3    Blokland, M.4    Pennings, J.L.5    Piersma, A.H.6
  • 48
    • 33845755467 scopus 로고    scopus 로고
    • Illuminating the silence: Understanding the structure and function of small RNAs
    • DOI 10.1038/nrm2085, PII NRM2085
    • Rana TM. 2007. Illuminating the silence: understanding the structure and function of small RNAs. Nat Rev Mol Cell Biol 8:23-36. (Pubitemid 46012012)
    • (2007) Nature Reviews Molecular Cell Biology , vol.8 , Issue.1 , pp. 23-36
    • Rana, T.M.1
  • 49
    • 0002125651 scopus 로고
    • The inheritance and expression of fused, a new mutation in the house mouse
    • Reed SC. 1937. The inheritance and expression of fused, a new mutation in the house mouse. Genetics 22:1-13.
    • (1937) Genetics , vol.22 , pp. 1-13
    • Reed, S.C.1
  • 50
    • 37849034115 scopus 로고    scopus 로고
    • Heterogeneity in imprinted methylation patterns of pluripotent embryonic germ cells derived from pre-migratory mouse germ cells
    • Shovlin TC, Durcova-Hills G, Surani A, McLaren A. 2008. Heterogeneity in imprinted methylation patterns of pluripotent embryonic germ cells derived from pre-migratory mouse germ cells. Dev Biol 313:674-681.
    • (2008) Dev Biol , vol.313 , pp. 674-681
    • Shovlin, T.C.1    Durcova-Hills, G.2    Surani, A.3    McLaren, A.4
  • 52
    • 33846489616 scopus 로고    scopus 로고
    • Two different transgenes to study gene silencing and re-expression during zebrafish caudal fin and retinal regeneration
    • DOI 10.1100/tsw.2006.328, Limb and Fin Regeneration
    • Thummel R, Burket CT, Hyde DR. 2006. Two different transgenes to study gene silencing and re-expression during zebrafish caudal fin and retinal regeneration. ScientificWorldJournal 6 (Suppl 1):65-81. (Pubitemid 46155750)
    • (2006) TheScientificWorldJournal , vol.6 , Issue.SUPPL. 1 , pp. 65-81
    • Thummel, R.1    Burket, C.T.2    Hyde, D.R.3
  • 53
    • 0000154866 scopus 로고    scopus 로고
    • 71564 Federal Register, vol. 63
    • US EPA. 1998. Endocrine Disruptor Screening Program: Statement of Policy. p. 71564. Federal Register Vol. 63, 248:71542-71568. http:// www.epa.gov/scipoly/oscpendo/pubs/122898frnotice.pdf.
    • (1998) Endocrine Disruptor Screening Program: Statement of Policy , vol.248 , pp. 71542-71568
  • 54
    • 0030776825 scopus 로고    scopus 로고
    • Two dominant mutations in the mouse Fused gene are the result of transposon insertions
    • Vasicek TJ, Zeng L, Guan XJ, Zhang T, Costantini F, Tilghman SM. 1997. Two dominant mutations in the mouse fused gene are the result of transposon insertions. Genetics 147:777-786. (Pubitemid 27418585)
    • (1997) Genetics , vol.147 , Issue.2 , pp. 777-786
    • Vasicek, T.J.1    Zeng, L.2    Guan, X.-J.3    Zhang, T.4    Costantini, F.5    Tilghman, S.M.6
  • 56
    • 78650529660 scopus 로고    scopus 로고
    • Identifying the combinatorial effects of histone modifications by association rule mining in yeast
    • Wang J, Dai X, Xiang Q, Deng Y, Feng J, Dai Z, He C. 2010. Identifying the combinatorial effects of histone modifications by association rule mining in yeast. Evol Bioinform Online 6:113-131.
    • (2010) Evol Bioinform Online , vol.6 , pp. 113-131
    • Wang, J.1    Dai, X.2    Xiang, Q.3    Deng, Y.4    Feng, J.5    Dai, Z.6    He, C.7
  • 57
    • 67650911933 scopus 로고    scopus 로고
    • Genistein mechanisms and timing of prostate cancer chemoprevention in lobund-wistar rats
    • Wang J, Eltoum IE, Carpenter M, Lamartiniere CA. 2009. Genistein mechanisms and timing of prostate cancer chemoprevention in lobund-wistar rats. Asian Pac J Cancer Prev 10:143-150.
    • (2009) Asian Pac J Cancer Prev , vol.10 , pp. 143-150
    • Wang, J.1    Eltoum, I.E.2    Carpenter, M.3    Lamartiniere, C.A.4
  • 58
    • 33749026098 scopus 로고    scopus 로고
    • Maternal methyl supplements increase offspring DNA methylation at Axin fused
    • DOI 10.1002/dvg.20230
    • Waterland RA, Dolinoy DC, Lin JR, Smith CA, Shi X, Tahiliani KG. 2006. Maternal methyl supplements increase offspring DNA methylation at axin fused. Genesis 44:401-406. (Pubitemid 44454044)
    • (2006) Genesis , vol.44 , Issue.9 , pp. 401-406
    • Waterland, R.A.1    Dolinoy, D.C.2    Lin, J.-R.3    Smith, C.A.4    Shi, X.5    Tahiliani, K.G.6
  • 59
    • 0043093697 scopus 로고    scopus 로고
    • Transposable elements: Targets for early nutritional effects on epigenetic gene regulation
    • DOI 10.1128/MCB.23.15.5293-5300.2003
    • Waterland RA, Jirtle RL. 2003. Transposable elements: targets for early nutritional effects on epigenetic gene regulation. Mol Cell Biol 23:5293-5300. (Pubitemid 36950884)
    • (2003) Molecular and Cellular Biology , vol.23 , Issue.15 , pp. 5293-5300
    • Waterland, R.A.1    Jirtle, R.L.2
  • 61
    • 0031873353 scopus 로고    scopus 로고
    • Maternal epigenetics and methyl supplements affect agouti gene expression in A(vy)/a mice
    • Wolff GL, Kodell RL, Moore SR, Cooney CA. 1998. Maternal epigenetics and methyl supplements affect agouti gene expression in Avy/a mice. FASEB J 12:949-957. (Pubitemid 28359576)
    • (1998) FASEB Journal , vol.12 , Issue.11 , pp. 949-957
    • Wolff, G.L.1    Kodell, R.L.2    Moore, S.R.3    Cooney, C.A.4
  • 62
    • 78349271171 scopus 로고    scopus 로고
    • Historical perspective on the development of the genetic toxicity test battery in the United States
    • Zeiger E. 2010. Historical perspective on the development of the genetic toxicity test battery in the United States. Environ Mol Mutagen 51:781-791.
    • (2010) Environ Mol Mutagen , vol.51 , pp. 781-791
    • Zeiger, E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.