메뉴 건너뛰기




Volumn 65, Issue 3, 2011, Pages 193-203

Insertion sequence elements in Cupriavidus metallidurans CH34: Distribution and role in adaptation

Author keywords

Autotrophy; Burkholderiaceae; Heavy metal; Insertion sequence; Mutator

Indexed keywords

ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; BURKHOLDERIACEAE; CONTROLLED STUDY; CUPRIAVIDUS; CUPRIAVIDUS METALLIDURANS; DNA TRANSPOSITION; ENVIRONMENTAL STRESS; EVOLUTIONARY ADAPTATION; GENE INACTIVATION; GENE INSERTION SEQUENCE; GENE REARRANGEMENT; GENETIC CONSERVATION; GENOMIC ISLAND; HORIZONTAL GENE TRANSFER; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; SEQUENCE ANALYSIS;

EID: 79954415222     PISSN: 0147619X     EISSN: 10959890     Source Type: Journal    
DOI: 10.1016/j.plasmid.2010.12.006     Document Type: Article
Times cited : (32)

References (67)
  • 1
    • 0347297279 scopus 로고    scopus 로고
    • Evidence for a prokaryotic insertion-sequence contamination in eukaryotic sequences registered in different databases
    • Astua-Monge G., et al. Evidence for a prokaryotic insertion-sequence contamination in eukaryotic sequences registered in different databases. Theor. Appl. Genet. 2002, 104:48-53.
    • (2002) Theor. Appl. Genet. , vol.104 , pp. 48-53
    • Astua-Monge, G.1
  • 2
    • 40449095397 scopus 로고    scopus 로고
    • Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation
    • Bentley S.D., et al. Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation. J. Bacteriol. 2008, 190:2150-2160.
    • (2008) J. Bacteriol. , vol.190 , pp. 2150-2160
    • Bentley, S.D.1
  • 3
    • 70449709427 scopus 로고    scopus 로고
    • Insertion Sequence content reflects genome plasticity in strains of the root nodule actinobacterium Frankia
    • Bickhart D.M., et al. Insertion Sequence content reflects genome plasticity in strains of the root nodule actinobacterium Frankia. BMC Genomics. 2009, 10:468.
    • (2009) BMC Genomics. , vol.10 , pp. 468
    • Bickhart, D.M.1
  • 4
    • 0027286178 scopus 로고
    • Contamination of DNA database sequence entries with Escherichia coli insertion sequences
    • Binns M. Contamination of DNA database sequence entries with Escherichia coli insertion sequences. Nucleic Acids Res. 1993, 21:779.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 779
    • Binns, M.1
  • 5
    • 0035289309 scopus 로고    scopus 로고
    • Genetic diversity among 3-chloroaniline- and aniline-degrading strains of the Comamonadaceae
    • Boon N., et al. Genetic diversity among 3-chloroaniline- and aniline-degrading strains of the Comamonadaceae. Appl. Environ. Microbiol. 2001, 67:1107-1115.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 1107-1115
    • Boon, N.1
  • 6
    • 0032999894 scopus 로고    scopus 로고
    • Amplified rDNA restriction analysis and further genotypic characterisation of metal-resistant soil bacteria and related facultative hydrogenotrophs
    • Brim H., et al. Amplified rDNA restriction analysis and further genotypic characterisation of metal-resistant soil bacteria and related facultative hydrogenotrophs. Syst. Appl. Microbiol. 1999, 22:258-268.
    • (1999) Syst. Appl. Microbiol. , vol.22 , pp. 258-268
    • Brim, H.1
  • 7
    • 0033828371 scopus 로고    scopus 로고
    • Metal-ion tolerance in Escherichia coli: analysis of transcriptional profiles by gene-array technology
    • Brocklehurst K.R., Morby A.P. Metal-ion tolerance in Escherichia coli: analysis of transcriptional profiles by gene-array technology. Microbiology 2000, 146:2277-2282.
    • (2000) Microbiology , vol.146 , pp. 2277-2282
    • Brocklehurst, K.R.1    Morby, A.P.2
  • 8
    • 12744280848 scopus 로고    scopus 로고
    • Proposed involvement of a soluble methane monooxygenase homologue in the cyclohexane-dependent growth of a new Brachymonas species
    • Brzostowicz P.C., et al. Proposed involvement of a soluble methane monooxygenase homologue in the cyclohexane-dependent growth of a new Brachymonas species. Environ. Microbiol. 2005, 7:179-190.
    • (2005) Environ. Microbiol. , vol.7 , pp. 179-190
    • Brzostowicz, P.C.1
  • 9
    • 32244448730 scopus 로고    scopus 로고
    • A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation
    • Choi K.H., et al. A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation. J. Microbiol. Methods 2006, 64:391-397.
    • (2006) J. Microbiol. Methods , vol.64 , pp. 391-397
    • Choi, K.H.1
  • 10
    • 60849131243 scopus 로고    scopus 로고
    • Conjugative interaction induces transposition of ISPst9 in Pseudomonas stutzeri AN10
    • Christie-Oleza J.A., et al. Conjugative interaction induces transposition of ISPst9 in Pseudomonas stutzeri AN10. J. Bacteriol. 2009, 191:1239-1247.
    • (2009) J. Bacteriol. , vol.191 , pp. 1239-1247
    • Christie-Oleza, J.A.1
  • 11
    • 0034872583 scopus 로고    scopus 로고
    • Molecular characterization of a deletion/duplication rearrangement in tfd genes from Ralstonia eutropha JMP134 (pJP4) that improves growth on 3-chlorobenzoic acid but abolishes growth on 2,4-dichlorophenoxyacetic acid
    • Clement P., et al. Molecular characterization of a deletion/duplication rearrangement in tfd genes from Ralstonia eutropha JMP134 (pJP4) that improves growth on 3-chlorobenzoic acid but abolishes growth on 2,4-dichlorophenoxyacetic acid. Microbiology 2001, 147:2141-2148.
    • (2001) Microbiology , vol.147 , pp. 2141-2148
    • Clement, P.1
  • 12
    • 0027450609 scopus 로고
    • A new type of Alcaligenes eutrophus CH34 zinc resistance generated by mutations affecting regulation of the cnr cobalt-nickel resistance system
    • Collard J.M., et al. A new type of Alcaligenes eutrophus CH34 zinc resistance generated by mutations affecting regulation of the cnr cobalt-nickel resistance system. J. Bacteriol. 1993, 175:779-784.
    • (1993) J. Bacteriol. , vol.175 , pp. 779-784
    • Collard, J.M.1
  • 13
    • 60749097148 scopus 로고    scopus 로고
    • Natural products from environmental DNA hosted in Ralstonia metallidurans
    • Craig J.W., et al. Natural products from environmental DNA hosted in Ralstonia metallidurans. ACS Chem. Biol. 2009, 4:23-28.
    • (2009) ACS Chem. Biol. , vol.4 , pp. 23-28
    • Craig, J.W.1
  • 14
    • 77649206077 scopus 로고    scopus 로고
    • Expanding small-molecule functional metagenomics through parallel screening of broad-host-range cosmid environmental DNA libraries in diverse proteobacteria
    • Craig J.W., et al. Expanding small-molecule functional metagenomics through parallel screening of broad-host-range cosmid environmental DNA libraries in diverse proteobacteria. Appl. Environ. Microbiol. 2010, 76:1633-1641.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 1633-1641
    • Craig, J.W.1
  • 15
    • 40749114397 scopus 로고    scopus 로고
    • IS4 family goes genomic
    • De Palmenaer D., et al. IS4 family goes genomic. BMC Evol. Biol. 2008, 8:18.
    • (2008) BMC Evol. Biol. , vol.8 , pp. 18
    • De Palmenaer, D.1
  • 16
    • 0042431840 scopus 로고    scopus 로고
    • Extremely low frequency magnetic fields affect transposition activity in Escherichia coli
    • Del Re B., et al. Extremely low frequency magnetic fields affect transposition activity in Escherichia coli. Radiat. Environ. Biophys. 2003, 42:113-118.
    • (2003) Radiat. Environ. Biophys. , vol.42 , pp. 113-118
    • Del Re, B.1
  • 17
    • 0025236782 scopus 로고
    • DNA probe-mediated detection of resistant bacteria from soils highly polluted by heavy metals
    • Diels L., Mergeay M. DNA probe-mediated detection of resistant bacteria from soils highly polluted by heavy metals. Appl. Environ. Microbiol. 1990, 56:1485-1491.
    • (1990) Appl. Environ. Microbiol. , vol.56 , pp. 1485-1491
    • Diels, L.1    Mergeay, M.2
  • 18
    • 0027131924 scopus 로고
    • Use of DNA probes and plasmid capture in a search for new interesting environmental genes
    • Diels L., et al. Use of DNA probes and plasmid capture in a search for new interesting environmental genes. Sci. Total Environ. 1993, 140:471-478.
    • (1993) Sci. Total Environ. , vol.140 , pp. 471-478
    • Diels, L.1
  • 19
    • 0026618936 scopus 로고
    • Cloning and sequencing of IS1086, an Alcaligenes eutrophus insertion element related to IS30 and IS4351
    • Dong Q., et al. Cloning and sequencing of IS1086, an Alcaligenes eutrophus insertion element related to IS30 and IS4351. J. Bacteriol. 1992, 174:8133-8138.
    • (1992) J. Bacteriol. , vol.174 , pp. 8133-8138
    • Dong, Q.1
  • 20
    • 0031829602 scopus 로고    scopus 로고
    • UV light induces IS10 transposition in Escherichia coli
    • Eichenbaum Z., Livneh Z. UV light induces IS10 transposition in Escherichia coli. Genetics 1998, 149:1173-1181.
    • (1998) Genetics , vol.149 , pp. 1173-1181
    • Eichenbaum, Z.1    Livneh, Z.2
  • 21
    • 55249109000 scopus 로고    scopus 로고
    • The genome organization of Ralstonia eutropha strain H16 and related species of the Burkholderiaceae
    • Fricke W.F., et al. The genome organization of Ralstonia eutropha strain H16 and related species of the Burkholderiaceae. J. Microbiol. Biotechnol. 2009, 16:124-135.
    • (2009) J. Microbiol. Biotechnol. , vol.16 , pp. 124-135
    • Fricke, W.F.1
  • 22
    • 0342751307 scopus 로고    scopus 로고
    • Regulation of the cnr cobalt and nickel resistance determinant from Ralstonia sp. strain CH34
    • Grass G., et al. Regulation of the cnr cobalt and nickel resistance determinant from Ralstonia sp. strain CH34. J. Bacteriol. 2000, 182:1390-1398.
    • (2000) J. Bacteriol. , vol.182 , pp. 1390-1398
    • Grass, G.1
  • 23
    • 70349152253 scopus 로고    scopus 로고
    • MrdH, a novel metal resistance determinant of Pseudomonas putida KT2440, is flanked by metal-inducible mobile genetic elements
    • Haritha A., et al. MrdH, a novel metal resistance determinant of Pseudomonas putida KT2440, is flanked by metal-inducible mobile genetic elements. J. Bacteriol. 2009, 191:5976-5987.
    • (2009) J. Bacteriol. , vol.191 , pp. 5976-5987
    • Haritha, A.1
  • 24
    • 0030976039 scopus 로고    scopus 로고
    • A fusion promoter created by a new insertion sequence, IS1490, activates transcription of 2,4,5-trichlorophenoxyacetic acid catabolic genes in Burkholderia cepacia AC1100
    • Hubner A., Hendrickson W. A fusion promoter created by a new insertion sequence, IS1490, activates transcription of 2,4,5-trichlorophenoxyacetic acid catabolic genes in Burkholderia cepacia AC1100. J. Bacteriol. 1997, 179:2717-2723.
    • (1997) J. Bacteriol. , vol.179 , pp. 2717-2723
    • Hubner, A.1    Hendrickson, W.2
  • 25
    • 77956398098 scopus 로고    scopus 로고
    • The complete genome sequence of Cupriavidus metallidurans strain CH34, a master survivalist in harsh and anthropogenic environments
    • Janssen P.J., et al. The complete genome sequence of Cupriavidus metallidurans strain CH34, a master survivalist in harsh and anthropogenic environments. PLoS One 2010, 5:e10433.
    • (2010) PLoS One , vol.5
    • Janssen, P.J.1
  • 26
    • 0030945608 scopus 로고    scopus 로고
    • Conjugative plasmids and the degradation of arylsulfonates in Comamonas testosteroni
    • Junker F., Cook A.M. Conjugative plasmids and the degradation of arylsulfonates in Comamonas testosteroni. Appl. Environ. Microbiol. 1997, 63:2403-2410.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 2403-2410
    • Junker, F.1    Cook, A.M.2
  • 27
    • 0020635145 scopus 로고
    • Chromosome transfer and R-prime plasmid formation mediated by plasmid pULB113 (RP4-mini-Mu) in Alcaligenes eutrophus CH34 and Pseudomonas fluorescens 6.2
    • Lejeune P., et al. Chromosome transfer and R-prime plasmid formation mediated by plasmid pULB113 (RP4-mini-Mu) in Alcaligenes eutrophus CH34 and Pseudomonas fluorescens 6.2. J. Bacteriol. 1983, 155:1015-1026.
    • (1983) J. Bacteriol. , vol.155 , pp. 1015-1026
    • Lejeune, P.1
  • 28
    • 0029852994 scopus 로고    scopus 로고
    • The tfdR gene product can successfully take over the role of the insertion element-inactivated TfdT protein as a transcriptional activator of the tfdCDEF gene cluster, which encodes chlorocatechol degradation in Ralstonia eutropha JMP134(pJP4)
    • Leveau J.H., van der Meer J.R. The tfdR gene product can successfully take over the role of the insertion element-inactivated TfdT protein as a transcriptional activator of the tfdCDEF gene cluster, which encodes chlorocatechol degradation in Ralstonia eutropha JMP134(pJP4). J. Bacteriol. 1996, 178:6824-6832.
    • (1996) J. Bacteriol. , vol.178 , pp. 6824-6832
    • Leveau, J.H.1    van der Meer, J.R.2
  • 29
    • 68449101702 scopus 로고    scopus 로고
    • The response of Cupriavidus metallidurans CH34 to spaceflight in the international space station
    • Leys N., et al. The response of Cupriavidus metallidurans CH34 to spaceflight in the international space station. Antonie Van Leeuwenhoek 2009, 96:227-245.
    • (2009) Antonie Van Leeuwenhoek , vol.96 , pp. 227-245
    • Leys, N.1
  • 30
    • 34247849326 scopus 로고    scopus 로고
    • Characterization of the variants, flanking genes, and promoter activity of the Leifsonia xyli subsp. cynodontis insertion sequence IS1237
    • Lin H., et al. Characterization of the variants, flanking genes, and promoter activity of the Leifsonia xyli subsp. cynodontis insertion sequence IS1237. J. Bacteriol. 2007, 189:3217-3227.
    • (2007) J. Bacteriol. , vol.189 , pp. 3217-3227
    • Lin, H.1
  • 31
    • 0030790981 scopus 로고    scopus 로고
    • Glutathione S-transferase-encoding gene as a potential probe for environmental bacterial isolates capable of degrading polycyclic aromatic hydrocarbons
    • Lloyd-Jones G., Lau P.C. Glutathione S-transferase-encoding gene as a potential probe for environmental bacterial isolates capable of degrading polycyclic aromatic hydrocarbons. Appl. Environ. Microbiol. 1997, 63:3286-3290.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3286-3290
    • Lloyd-Jones, G.1    Lau, P.C.2
  • 33
    • 0034811709 scopus 로고    scopus 로고
    • Complete nucleotide sequence and organization of the atrazine catabolic plasmid pADP-1 from Pseudomonas sp. strain ADP
    • Martinez B., et al. Complete nucleotide sequence and organization of the atrazine catabolic plasmid pADP-1 from Pseudomonas sp. strain ADP. J. Bacteriol. 2001, 183:5684-5697.
    • (2001) J. Bacteriol. , vol.183 , pp. 5684-5697
    • Martinez, B.1
  • 34
    • 42949094250 scopus 로고    scopus 로고
    • Dynamics of Pseudomonas aeruginosa genome evolution
    • Mathee K., et al. Dynamics of Pseudomonas aeruginosa genome evolution. Proc. Natl. Acad. Sci. USA 2008, 105:3100-3105.
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 3100-3105
    • Mathee, K.1
  • 35
    • 54949131361 scopus 로고    scopus 로고
    • The genome of Polaromonas sp. strain JS666: insights into the evolution of a hydrocarbon- and xenobiotic-degrading bacterium, and features of relevance to biotechnology
    • Mattes T.E., et al. The genome of Polaromonas sp. strain JS666: insights into the evolution of a hydrocarbon- and xenobiotic-degrading bacterium, and features of relevance to biotechnology. Appl. Environ. Microbiol. 2008, 74:6405-6416.
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 6405-6416
    • Mattes, T.E.1
  • 36
    • 0021925630 scopus 로고
    • Alcaligenes eutrophus CH34 is a facultative chemolithotroph with plasmid-bound resistance to heavy metals
    • Mergeay M., et al. Alcaligenes eutrophus CH34 is a facultative chemolithotroph with plasmid-bound resistance to heavy metals. J. Bacteriol. 1985, 162:328-334.
    • (1985) J. Bacteriol. , vol.162 , pp. 328-334
    • Mergeay, M.1
  • 37
    • 0002740256 scopus 로고
    • High-level spontaneous mutagenesis revealed by survival at nonoptimal temperature in Alcaligenes eutrophus CH34
    • Mergeay M., et al. High-level spontaneous mutagenesis revealed by survival at nonoptimal temperature in Alcaligenes eutrophus CH34. Arch. Int. Physiol. Biochim. 1987, 95:B36.
    • (1987) Arch. Int. Physiol. Biochim. , vol.95
    • Mergeay, M.1
  • 38
    • 0038240634 scopus 로고    scopus 로고
    • Ralstonia metallidurans, a bacterium specifically adapted to toxic metals: towards a catalogue of metal-responsive genes
    • Mergeay M., et al. Ralstonia metallidurans, a bacterium specifically adapted to toxic metals: towards a catalogue of metal-responsive genes. FEMS Microbiol. Rev. 2003, 27:385-410.
    • (2003) FEMS Microbiol. Rev. , vol.27 , pp. 385-410
    • Mergeay, M.1
  • 39
    • 68449094932 scopus 로고    scopus 로고
    • Megaplasmids in Cupriavidus genus and metal resistance
    • Springer, Berlin, E. Schwartz (Ed.)
    • Mergeay M., et al. Megaplasmids in Cupriavidus genus and metal resistance. Microbial Megaplasmids, vol. 11 2009, Springer, Berlin. E. Schwartz (Ed.).
    • (2009) Microbial Megaplasmids, vol. 11
    • Mergeay, M.1
  • 40
    • 0036790007 scopus 로고    scopus 로고
    • Microbial genome evolution: sources of variability
    • Mira A., et al. Microbial genome evolution: sources of variability. Curr. Opin. Microbiol. 2002, 5:506-512.
    • (2002) Curr. Opin. Microbiol. , vol.5 , pp. 506-512
    • Mira, A.1
  • 41
    • 35048813675 scopus 로고    scopus 로고
    • Plasmids pMOL28 and pMOL30 of Cupriavidus metallidurans are specialized in the maximal viable response to heavy metals
    • Monchy S., et al. Plasmids pMOL28 and pMOL30 of Cupriavidus metallidurans are specialized in the maximal viable response to heavy metals. J. Bacteriol. 2007, 189:7417-7425.
    • (2007) J. Bacteriol. , vol.189 , pp. 7417-7425
    • Monchy, S.1
  • 42
    • 2942755693 scopus 로고    scopus 로고
    • Regulation of transposition in bacteria
    • Nagy Z., Chandler M. Regulation of transposition in bacteria. Res. Microbiol. 2004, 155:387-398.
    • (2004) Res. Microbiol. , vol.155 , pp. 387-398
    • Nagy, Z.1    Chandler, M.2
  • 43
    • 0025940311 scopus 로고
    • Chlorobenzoate catabolic transposon Tn5271 is a composite class I element with flanking class II insertion sequences
    • Nakatsu C., et al. Chlorobenzoate catabolic transposon Tn5271 is a composite class I element with flanking class II insertion sequences. Proc. Natl. Acad. Sci. USA 1991, 88:8312-8316.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 8312-8316
    • Nakatsu, C.1
  • 44
    • 0023227919 scopus 로고
    • Biodegradation of trichloroethylene and involvement of an aromatic biodegradative pathway
    • Nelson M.J., et al. Biodegradation of trichloroethylene and involvement of an aromatic biodegradative pathway. Appl. Environ. Microbiol. 1987, 53:949-954.
    • (1987) Appl. Environ. Microbiol. , vol.53 , pp. 949-954
    • Nelson, M.J.1
  • 45
    • 17444407902 scopus 로고    scopus 로고
    • High-temperature-induced transposition of insertion elements in Burkholderia multivorans ATCC 17616
    • Ohtsubo Y., et al. High-temperature-induced transposition of insertion elements in Burkholderia multivorans ATCC 17616. Appl. Environ. Microbiol. 2005, 71:1822-1828.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 1822-1828
    • Ohtsubo, Y.1
  • 46
    • 33646116567 scopus 로고    scopus 로고
    • The locus coding for the 3-nitrobenzoate dioxygenase of Comamonas sp. strain JS46 is flanked by IS1071 elements and is subject to deletion and inversion events
    • Providenti M.A., et al. The locus coding for the 3-nitrobenzoate dioxygenase of Comamonas sp. strain JS46 is flanked by IS1071 elements and is subject to deletion and inversion events. Appl. Environ. Microbiol 2006, 72:2651-2660.
    • (2006) Appl. Environ. Microbiol , vol.72 , pp. 2651-2660
    • Providenti, M.A.1
  • 47
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: the European Molecular Biology Open Software Suite
    • Rice P., et al. EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet. 2000, 16:276-277.
    • (2000) Trends Genet. , vol.16 , pp. 276-277
    • Rice, P.1
  • 48
    • 3242753673 scopus 로고    scopus 로고
    • Mineralization of individual congeners of linear alkylbenzenesulfonate by defined pairs of heterotrophic bacteria
    • Schleheck D., et al. Mineralization of individual congeners of linear alkylbenzenesulfonate by defined pairs of heterotrophic bacteria. Appl. Environ. Microbiol. 2004, 70:4053-4063.
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 4053-4063
    • Schleheck, D.1
  • 49
    • 2942632968 scopus 로고    scopus 로고
    • Dynamics of insertion sequence elements during experimental evolution of bacteria
    • Schneider D., Lenski R.E. Dynamics of insertion sequence elements during experimental evolution of bacteria. Res. Microbiol. 2004, 155:319-327.
    • (2004) Res. Microbiol. , vol.155 , pp. 319-327
    • Schneider, D.1    Lenski, R.E.2
  • 50
    • 0033812144 scopus 로고    scopus 로고
    • A broad-host-range plasmid for isolating mobile genetic elements in Gram-negative bacteria
    • Schneider D., et al. A broad-host-range plasmid for isolating mobile genetic elements in Gram-negative bacteria. Plasmid 2000, 44:201-207.
    • (2000) Plasmid , vol.44 , pp. 201-207
    • Schneider, D.1
  • 51
    • 33644873699 scopus 로고    scopus 로고
    • ISfinder: the reference centre for bacterial insertion sequences
    • Siguier P., et al. ISfinder: the reference centre for bacterial insertion sequences. Nucleic Acids Res. 2006, 34:D32-D36.
    • (2006) Nucleic Acids Res. , vol.34
    • Siguier, P.1
  • 52
    • 0242575001 scopus 로고    scopus 로고
    • Structure of haloacetate-catabolic IncP-1β plasmid pUO1 and genetic mobility of its residing haloacetate-catabolic transposon
    • Sota M., et al. Structure of haloacetate-catabolic IncP-1β plasmid pUO1 and genetic mobility of its residing haloacetate-catabolic transposon. J. Bacteriol. 2003, 185:6741-6745.
    • (2003) J. Bacteriol. , vol.185 , pp. 6741-6745
    • Sota, M.1
  • 53
    • 33644864375 scopus 로고    scopus 로고
    • Functional analysis of unique class II insertion sequence IS1071
    • Sota M., et al. Functional analysis of unique class II insertion sequence IS1071. Appl. Environ. Microbiol. 2006, 72:291-297.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 291-297
    • Sota, M.1
  • 54
    • 33745008644 scopus 로고    scopus 로고
    • Dynamic metabolic adjustments and genome plasticity are implicated in the heat shock response of the extremely thermoacidophilic archaeon Sulfolobus solfataricus
    • Tachdjian S., Kelly R.M. Dynamic metabolic adjustments and genome plasticity are implicated in the heat shock response of the extremely thermoacidophilic archaeon Sulfolobus solfataricus. J. Bacteriol. 2006, 188:4553-4559.
    • (2006) J. Bacteriol. , vol.188 , pp. 4553-4559
    • Tachdjian, S.1    Kelly, R.M.2
  • 55
    • 0030945209 scopus 로고    scopus 로고
    • Genetic and physical maps of the Alcaligenes eutrophus CH34 megaplasmid pMOL28 and its derivative pMOL50 obtained after temperature-induced mutagenesis and mortality
    • Taghavi S., et al. Genetic and physical maps of the Alcaligenes eutrophus CH34 megaplasmid pMOL28 and its derivative pMOL50 obtained after temperature-induced mutagenesis and mortality. Plasmid 1997, 37:22-34.
    • (1997) Plasmid , vol.37 , pp. 22-34
    • Taghavi, S.1
  • 57
    • 0033950956 scopus 로고    scopus 로고
    • Regulation of the cnr cobalt and nickel resistance determinant of Ralstonia eutropha (Alcaligenes eutrophus) CH34
    • Tibazarwa C., et al. Regulation of the cnr cobalt and nickel resistance determinant of Ralstonia eutropha (Alcaligenes eutrophus) CH34. J. Bacteriol. 2000, 182:1399-1409.
    • (2000) J. Bacteriol. , vol.182 , pp. 1399-1409
    • Tibazarwa, C.1
  • 58
    • 0028329240 scopus 로고
    • Exogenous isolation of mobilizing plasmids from polluted soils and sludges
    • Top E., et al. Exogenous isolation of mobilizing plasmids from polluted soils and sludges. Appl. Environ. Microbiol. 1994, 60:831-839.
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 831-839
    • Top, E.1
  • 59
    • 34047240364 scopus 로고    scopus 로고
    • Causes of insertion sequences abundance in prokaryotic genomes
    • Touchon M., Rocha E.P. Causes of insertion sequences abundance in prokaryotic genomes. Mol. Biol. Evol. 2007, 24:969-981.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 969-981
    • Touchon, M.1    Rocha, E.P.2
  • 60
    • 33748760611 scopus 로고    scopus 로고
    • The genome of black cottonwood, Populus trichocarpa (Torr & Gray)
    • Tuskan G.A., et al. The genome of black cottonwood, Populus trichocarpa (Torr & Gray). Science 2006, 313:1596-1604.
    • (2006) Science , vol.313 , pp. 1596-1604
    • Tuskan, G.A.1
  • 61
    • 25144499113 scopus 로고    scopus 로고
    • Transposition is modulated by a diverse set of host factors in Escherichia coli and is stimulated by nutritional stress
    • Twiss E., et al. Transposition is modulated by a diverse set of host factors in Escherichia coli and is stimulated by nutritional stress. Mol. Microbiol. 2005, 57:1593-1607.
    • (2005) Mol. Microbiol. , vol.57 , pp. 1593-1607
    • Twiss, E.1
  • 62
    • 31644444476 scopus 로고    scopus 로고
    • MaGe: a microbial genome annotation system supported by synteny results
    • Vallenet D., et al. MaGe: a microbial genome annotation system supported by synteny results. Nucleic Acids Res. 2006, 34:53-65.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 53-65
    • Vallenet, D.1
  • 63
    • 68449103668 scopus 로고    scopus 로고
    • Plasmids captured in C. metallidurans CH34: defining the PromA family of broad-host-range plasmids
    • Van der Auwera G.A., et al. Plasmids captured in C. metallidurans CH34: defining the PromA family of broad-host-range plasmids. Antonie Van Leeuwenhoek 2009, 96:193-204.
    • (2009) Antonie Van Leeuwenhoek , vol.96 , pp. 193-204
    • Van der Auwera, G.A.1
  • 64
    • 0001961733 scopus 로고
    • Stress and survival in Alcaligenes eutrophus CH34: effects of temperature and genetic rearrangements
    • Springer-Verlag, Heidelberg, M.J. Gauthier (Ed.)
    • van der Lelie D., et al. Stress and survival in Alcaligenes eutrophus CH34: effects of temperature and genetic rearrangements. Gene Transfers and Environment 1992, Springer-Verlag, Heidelberg. M.J. Gauthier (Ed.).
    • (1992) Gene Transfers and Environment
    • van der Lelie, D.1
  • 65
    • 68449102953 scopus 로고    scopus 로고
    • New mobile genetic elements in Cupriavidus metallidurans CH34, their possible roles and occurrence in other bacteria
    • Van Houdt R., et al. New mobile genetic elements in Cupriavidus metallidurans CH34, their possible roles and occurrence in other bacteria. Antonie Van Leeuwenhoek 2009, 96:205-226.
    • (2009) Antonie Van Leeuwenhoek , vol.96 , pp. 205-226
    • Van Houdt, R.1
  • 66
    • 34548764905 scopus 로고    scopus 로고
    • A survey of bacterial insertion sequences using IScan
    • Wagner A., et al. A survey of bacterial insertion sequences using IScan. Nucleic Acids Res. 2007, 35:5284-5293.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 5284-5293
    • Wagner, A.1
  • 67
    • 77953719270 scopus 로고    scopus 로고
    • Biosequestration via cooperative binding of copper by Ralstonia pickettii
    • Yang F., et al. Biosequestration via cooperative binding of copper by Ralstonia pickettii. Environ. Technol. 2010, 31:1045-1060.
    • (2010) Environ. Technol. , vol.31 , pp. 1045-1060
    • Yang, F.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.