메뉴 건너뛰기




Volumn 189, Issue 8, 2007, Pages 3217-3227

Characterization of the variants, flanking genes, and promoter activity of the Leifsonia xyli subsp. cynodontis insertion sequence IS1237

Author keywords

[No Author keywords available]

Indexed keywords

TRANSPOSASE;

EID: 34247849326     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.01403-06     Document Type: Article
Times cited : (10)

References (41)
  • 2
    • 0001134202 scopus 로고
    • Requirements for transformation in Bacillus subtilis
    • Anagnostopoulos, C., and J. Spizizen. 1961. Requirements for transformation in Bacillus subtilis. J. Bacteriol. 81:741-746.
    • (1961) J. Bacteriol , vol.81 , pp. 741-746
    • Anagnostopoulos, C.1    Spizizen, J.2
  • 3
    • 0020313705 scopus 로고
    • Transcriptional activity of the transposable elements Tn10 in the Salmonella typhimurum ilvGEDA operon
    • Blazey, D., and R. O. Burns. 1982. Transcriptional activity of the transposable elements Tn10 in the Salmonella typhimurum ilvGEDA operon. Proc. Natl. Acad. Sci. USA 79:5011-5015.
    • (1982) Proc. Natl. Acad. Sci. USA , vol.79 , pp. 5011-5015
    • Blazey, D.1    Burns, R.O.2
  • 4
    • 0020480589 scopus 로고    scopus 로고
    • Charlier, D., J. Piette, and N. Glansdorff. 1982. IS3 can function as a mobile promoter in E. coli. Nucleic Acids Res. 10:5935-5948.
    • Charlier, D., J. Piette, and N. Glansdorff. 1982. IS3 can function as a mobile promoter in E. coli. Nucleic Acids Res. 10:5935-5948.
  • 5
    • 3142674841 scopus 로고    scopus 로고
    • Rapid preparation of total nucleic acids from E. coli for multi-purpose applications
    • Cheng, L., T. Y. Li, and Y. Zhang. 2004. Rapid preparation of total nucleic acids from E. coli for multi-purpose applications. J. Biochem. Mol. Biol. 37:351-355.
    • (2004) J. Biochem. Mol. Biol , vol.37 , pp. 351-355
    • Cheng, L.1    Li, T.Y.2    Zhang, Y.3
  • 6
    • 0020315262 scopus 로고
    • Transposon Tn10 provides a promoter for transcription of adjacent sequences
    • Ciampi, M. S., M. B. Schmid, and J. R. Roth. 1982. Transposon Tn10 provides a promoter for transcription of adjacent sequences. Proc. Natl. Acad. Sci. USA 79:5016-5020.
    • (1982) Proc. Natl. Acad. Sci. USA , vol.79 , pp. 5016-5020
    • Ciampi, M.S.1    Schmid, M.B.2    Roth, J.R.3
  • 7
    • 0000751203 scopus 로고
    • Occurrence in Florida of the bacterium that cause bermudagrass stunting disease
    • Davis, M. J., and B. J. Augustin. 1984. Occurrence in Florida of the bacterium that cause bermudagrass stunting disease. Plant Dis. 68:1095-1097.
    • (1984) Plant Dis , vol.68 , pp. 1095-1097
    • Davis, M.J.1    Augustin, B.J.2
  • 8
    • 0021255515 scopus 로고
    • Clavibacter: A new genus containing some phytopathogenic coryneform bacteria, including Clavibacter xyli subsp. xyli sp. nov., subsp. nov. and Clavibacter xyli subsp. cynodontis subsp. nov., pathogens that cause ratton stunting disease of sugarcane and bermudagrass stunting disease
    • Davis, M. J., A. G. Gillaspie, Jr., A. K. Vidaver, and R. W. Harris. 1984. Clavibacter: a new genus containing some phytopathogenic coryneform bacteria, including Clavibacter xyli subsp. xyli sp. nov., subsp. nov. and Clavibacter xyli subsp. cynodontis subsp. nov., pathogens that cause ratton stunting disease of sugarcane and bermudagrass stunting disease. Int. J. Syst. Bacteriol. 34:107-117.
    • (1984) Int. J. Syst. Bacteriol , vol.34 , pp. 107-117
    • Davis, M.J.1    Gillaspie Jr., A.G.2    Vidaver, A.K.3    Harris, R.W.4
  • 9
    • 0035887029 scopus 로고    scopus 로고
    • Transient promoter formation: A new feedback mechanism for regulation of IS911 transposition
    • Duval-Valentin, G., C. Normand, V. Khemici, B. Marty, and M. Chandler. 2001. Transient promoter formation: a new feedback mechanism for regulation of IS911 transposition. EMBO J. 20:5802-5811.
    • (2001) EMBO J , vol.20 , pp. 5802-5811
    • Duval-Valentin, G.1    Normand, C.2    Khemici, V.3    Marty, B.4    Chandler, M.5
  • 10
    • 0033976024 scopus 로고    scopus 로고
    • Evtushenko, L. I., L. V. Dorofeeva, S. A. Subbotin, J. R. Cole, and J. M. Tiedje. 2000. Leifsonia poae gen. nov., sp. nov., isolated from nematode galls on Poa annua, and reclassification of Corynebacterium aquaticum Leifson 1962 as Leifsonia aquatica (ex Leifson 1962) gen. nov., nom. rev., comb. nov. and Clavibacter xyli Davis et al., 1984 with two subspecies as Leifsonia xyli (Davis et al., 1984) gen. nov., comb. nov. Int. J. Syst. Evol. Microbiol. 50:371-380.
    • Evtushenko, L. I., L. V. Dorofeeva, S. A. Subbotin, J. R. Cole, and J. M. Tiedje. 2000. Leifsonia poae gen. nov., sp. nov., isolated from nematode galls on Poa annua, and reclassification of " Corynebacterium aquaticum" Leifson 1962 as Leifsonia aquatica (ex Leifson 1962) gen. nov., nom. rev., comb. nov. and Clavibacter xyli Davis et al., 1984 with two subspecies as Leifsonia xyli (Davis et al., 1984) gen. nov., comb. nov. Int. J. Syst. Evol. Microbiol. 50:371-380.
  • 11
    • 0018242793 scopus 로고
    • Genetic studies of the lac repressor. VII. On the molecular nature of spontaneous hotspots in the lacI gene of Escherichia coli
    • Farabaugh, P. J., U. Schmeissner, M. Hofer, and J. H. Miller. 1978. Genetic studies of the lac repressor. VII. On the molecular nature of spontaneous hotspots in the lacI gene of Escherichia coli. J. Mol. Biol. 126:847-863.
    • (1978) J. Mol. Biol , vol.126 , pp. 847-863
    • Farabaugh, P.J.1    Schmeissner, U.2    Hofer, M.3    Miller, J.H.4
  • 12
    • 0000500110 scopus 로고
    • The construction of multifunctional shuttle vectors of Bacillus subtilis-Escherichia coli
    • Guo, X., H. Z. Xiong, M. Zhou, S. F. Jia, and Y. Xu. 1991. The construction of multifunctional shuttle vectors of Bacillus subtilis-Escherichia coli. Chin. J. Biotechnol. 7:224-229.
    • (1991) Chin. J. Biotechnol , vol.7 , pp. 224-229
    • Guo, X.1    Xiong, H.Z.2    Zhou, M.3    Jia, S.F.4    Xu, Y.5
  • 13
    • 0029018327 scopus 로고
    • Tight regulation, modulation, and high-level expression by vectors containing the arabinose pBAD promoter
    • Guzman, L. M., D. Belin, M. J. Carson, and J. Beckwith. 1995. Tight regulation, modulation, and high-level expression by vectors containing the arabinose pBAD promoter. J. Bacteriol. 177:4121-4130.
    • (1995) J. Bacteriol , vol.177 , pp. 4121-4130
    • Guzman, L.M.1    Belin, D.2    Carson, M.J.3    Beckwith, J.4
  • 14
    • 0030052565 scopus 로고    scopus 로고
    • Isolation of strong promoters from Clavibacter xyli subsp. cynodontis using a promoter probe plasmid
    • Haapalainen, M., M. Karp, and M. C. Metzler. 1996. Isolation of strong promoters from Clavibacter xyli subsp. cynodontis using a promoter probe plasmid. Biochim. Biophys. Acta 1305:130-134.
    • (1996) Biochim. Biophys. Acta , vol.1305 , pp. 130-134
    • Haapalainen, M.1    Karp, M.2    Metzler, M.C.3
  • 15
    • 0032080768 scopus 로고    scopus 로고
    • Integrative vector for stable transformation and expression of a β-1,3-glucanase gene in Clavibacter xily subsp. cynodontis
    • Haapalainen, M. L., N. Kobet, E. Piruzian, and M. C. Metzler. 1998. Integrative vector for stable transformation and expression of a β-1,3-glucanase gene in Clavibacter xily subsp. cynodontis. FEMS Microbiol. Lett. 162:1-7.
    • (1998) FEMS Microbiol. Lett , vol.162 , pp. 1-7
    • Haapalainen, M.L.1    Kobet, N.2    Piruzian, E.3    Metzler, M.C.4
  • 16
    • 0036837780 scopus 로고    scopus 로고
    • Escherichia coli insertion sequence IS150: Transposition via circular and linear intermediates
    • Haas, M., and B. Rak. 2002. Escherichia coli insertion sequence IS150: transposition via circular and linear intermediates. J. Bacteriol. 184:5833-5841.
    • (2002) J. Bacteriol , vol.184 , pp. 5833-5841
    • Haas, M.1    Rak, B.2
  • 17
    • 0030721538 scopus 로고    scopus 로고
    • Transposition and site-specific recombination: Adapting DNA cut-and-paste mechanisms to a variety of genetic rearrangement
    • Hallet, B., and D. J. sherratt. 1997. Transposition and site-specific recombination: adapting DNA cut-and-paste mechanisms to a variety of genetic rearrangement. FEMS Microbiol. Rev. 21:157-178.
    • (1997) FEMS Microbiol. Rev , vol.21 , pp. 157-178
    • Hallet, B.1    sherratt, D.J.2
  • 18
    • 0030976039 scopus 로고    scopus 로고
    • Hübner, A., and W. Hendrickson. 1997. A fusion promoter created by a new insertion sequence, IS1490, activates transcription of 2,4,5-trichlorophenoxy-acetic acid catabolic genes in Burkholderia cepacia AC1100. J. Bacteriol. 179:2717-2723.
    • Hübner, A., and W. Hendrickson. 1997. A fusion promoter created by a new insertion sequence, IS1490, activates transcription of 2,4,5-trichlorophenoxy-acetic acid catabolic genes in Burkholderia cepacia AC1100. J. Bacteriol. 179:2717-2723.
  • 19
    • 0031684504 scopus 로고    scopus 로고
    • Identification and characterization of IS1411, a new insertion sequence which causes transcriptional activation of the phenol degradation genes in Pseudomonas putida
    • Kallastu, A., R. Horak, and M. Kivisaar. 1998. Identification and characterization of IS1411, a new insertion sequence which causes transcriptional activation of the phenol degradation genes in Pseudomonas putida. J. Bacteriol. 180:5306-5312.
    • (1998) J. Bacteriol , vol.180 , pp. 5306-5312
    • Kallastu, A.1    Horak, R.2    Kivisaar, M.3
  • 20
    • 0041429497 scopus 로고    scopus 로고
    • Tools for genetic engineering in the amino acid-producing bacterium Corynebacterium glutamicum
    • Kirchner, O., and A. Tauch. 2003. Tools for genetic engineering in the amino acid-producing bacterium Corynebacterium glutamicum. J. Biotechnol. 104:187-199.
    • (2003) J. Biotechnol , vol.104 , pp. 187-199
    • Kirchner, O.1    Tauch, A.2
  • 22
    • 0345166831 scopus 로고    scopus 로고
    • Site-specific recombination by the DDE family member mobile element IS30 transposase
    • Kiss, J., M. Szabó, and F. Olasz. 2003. Site-specific recombination by the DDE family member mobile element IS30 transposase. Proc. Nat. Am. Sci. USA 100:15000-15005.
    • (2003) Proc. Nat. Am. Sci. USA , vol.100 , pp. 15000-15005
    • Kiss, J.1    Szabó, M.2    Olasz, F.3
  • 23
    • 0028110270 scopus 로고    scopus 로고
    • Laine, M. J., Y.-P. Zhang, and M. C. Metzler. 1994. IS1237, a repetitive chromosomal element from Clavibacter xyli subsp. cynodontis, is related to insertion sequences from gram-negative and gram-positive bacteria. Plasmid 32:270-279.
    • Laine, M. J., Y.-P. Zhang, and M. C. Metzler. 1994. IS1237, a repetitive chromosomal element from Clavibacter xyli subsp. cynodontis, is related to insertion sequences from gram-negative and gram-positive bacteria. Plasmid 32:270-279.
  • 24
    • 0028123804 scopus 로고
    • Integrative cloning, expression, and stability of the CrylA(c) gene from Bacillus thuringiensis subsp. kurstaki in a recombinant strain of Clavibacter xyli subsp. cynodontis
    • Lampel, J. S., G. L. Canter, M. B. Dimoch, J. L. Kelly, J. J. Anderson, B. B. Uratani, J. S. Foulke, Jr., and J. T. Turner. 1994. Integrative cloning, expression, and stability of the CrylA(c) gene from Bacillus thuringiensis subsp. kurstaki in a recombinant strain of Clavibacter xyli subsp. cynodontis. Appl. Environ. Microbiol. 60:501-508.
    • (1994) Appl. Environ. Microbiol , vol.60 , pp. 501-508
    • Lampel, J.S.1    Canter, G.L.2    Dimoch, M.B.3    Kelly, J.L.4    Anderson, J.J.5    Uratani, B.B.6    Foulke Jr., J.S.7    Turner, J.T.8
  • 25
    • 2942722264 scopus 로고    scopus 로고
    • Characterization of the replicon of a 51-kb native plasmid from the gram-positive bacterium Leifsonia xyli subsp. cynodontis
    • Li, T. Y., P. Yin, Y. Zhou, Y. Zhang, Y. P. Zhang, and T. A. Chen. 2004. Characterization of the replicon of a 51-kb native plasmid from the gram-positive bacterium Leifsonia xyli subsp. cynodontis. FEMS Microbiol. Lett. 236:33-39.
    • (2004) FEMS Microbiol. Lett , vol.236 , pp. 33-39
    • Li, T.Y.1    Yin, P.2    Zhou, Y.3    Zhang, Y.4    Zhang, Y.P.5    Chen, T.A.6
  • 26
    • 33846333532 scopus 로고    scopus 로고
    • Construction of a stable expression vector for Leifsonia xyli subsp. cynodontis and its application in studying the effect of the bacterium as an endophytic bacterium in rice
    • Li, T. Y., H. L. Zeng, Y. Ping, H. Lin, X. L. Fan, Z. G. Guo, and C. F. Zhang. 2007. Construction of a stable expression vector for Leifsonia xyli subsp. cynodontis and its application in studying the effect of the bacterium as an endophytic bacterium in rice. FEMS Microbiol. Lett. 267:176-183.
    • (2007) FEMS Microbiol. Lett , vol.267 , pp. 176-183
    • Li, T.Y.1    Zeng, H.L.2    Ping, Y.3    Lin, H.4    Fan, X.L.5    Guo, Z.G.6    Zhang, C.F.7
  • 27
    • 0038442865 scopus 로고
    • Isolation, culture and pathogenicity to Sudan Grass of a corynebacterium associated with ratoon stunting of sugarcane and with Bermuda grass
    • Liao, C. H., and T. A. Chen. 1981. Isolation, culture and pathogenicity to Sudan Grass of a corynebacterium associated with ratoon stunting of sugarcane and with Bermuda grass. Phytopathology 71:1303-1306.
    • (1981) Phytopathology , vol.71 , pp. 1303-1306
    • Liao, C.H.1    Chen, T.A.2
  • 28
    • 0032237875 scopus 로고    scopus 로고
    • Efficient amplification of insert end sequences from bacterial artificial chromosome clones by thermal asymmetric interlaced PCR
    • Liu, Y. G., and N. Huang. 1998. Efficient amplification of insert end sequences from bacterial artificial chromosome clones by thermal asymmetric interlaced PCR. Plant Mol. Biol. Rep. 16:175-181.
    • (1998) Plant Mol. Biol. Rep , vol.16 , pp. 175-181
    • Liu, Y.G.1    Huang, N.2
  • 29
    • 0033534487 scopus 로고    scopus 로고
    • Single cell analysis and selection of living retrovirus vector corrected mucopolysaccharidosis VII cells using a fluorescence activated cell sorting-based assay for mammalian β-glucuronidase enzymatic activity
    • Lorincz, M. C., M. K. Parente, M. Roederer, G. P. Nolan, Z. Diwu, D. I. Martin, L. A. Herzenberg, and J. H. Wolfe. 1999. Single cell analysis and selection of living retrovirus vector corrected mucopolysaccharidosis VII cells using a fluorescence activated cell sorting-based assay for mammalian β-glucuronidase enzymatic activity. J. Biol. Chem. 274:657-665.
    • (1999) J. Biol. Chem , vol.274 , pp. 657-665
    • Lorincz, M.C.1    Parente, M.K.2    Roederer, M.3    Nolan, G.P.4    Diwu, Z.5    Martin, D.I.6    Herzenberg, L.A.7    Wolfe, J.H.8
  • 31
    • 0026655207 scopus 로고
    • Transformation of the gram-positive bacterium Clavibacter xyli subsp. cynodontis by electroporation with plasmids from the IncP incompatibility group
    • Metzler, M. C., Y. P. Zhang, and T. A. Chen. 1992. Transformation of the gram-positive bacterium Clavibacter xyli subsp. cynodontis by electroporation with plasmids from the IncP incompatibility group. J. Bacteriol. 174:4500-4503.
    • (1992) J. Bacteriol , vol.174 , pp. 4500-4503
    • Metzler, M.C.1    Zhang, Y.P.2    Chen, T.A.3
  • 32
    • 2942755693 scopus 로고    scopus 로고
    • Regulation of transposition in bacteria
    • Nagy, Z., and M. Chandle. 2004. Regulation of transposition in bacteria. Res. Microbiol. 155:387-398.
    • (2004) Res. Microbiol , vol.155 , pp. 387-398
    • Nagy, Z.1    Chandle, M.2
  • 33
    • 34247874039 scopus 로고    scopus 로고
    • Detection of antibiotics sensitivity and plasmid of beneficial bacillus
    • Ni, X. Q., Z. Y. Chen, M. Q. He, and B. X. Cai. 1999. Detection of antibiotics sensitivity and plasmid of beneficial bacillus. Chin. J. Microecol. 11:4.
    • (1999) Chin. J. Microecol , vol.11 , pp. 4
    • Ni, X.Q.1    Chen, Z.Y.2    He, M.Q.3    Cai, B.X.4
  • 35
    • 0023989064 scopus 로고    scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson, W. R., and D. J. Lipman. 1998. Improved tools for biological sequence comparison. Proc. Acad. Sci. USA 85:2444-2448.
    • (1998) Proc. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 36
    • 0019772965 scopus 로고
    • Insertion of DNA activates the cryptic bgl operon in E. coli K-12
    • Reynolds, A. E., J. Felton, and A. Wright. 1981. Insertion of DNA activates the cryptic bgl operon in E. coli K-12. Nature 293:625-629.
    • (1981) Nature , vol.293 , pp. 625-629
    • Reynolds, A.E.1    Felton, J.2    Wright, A.3
  • 38
    • 2942632968 scopus 로고    scopus 로고
    • Dynamics of insertion sequence elements during experimental evolution of bacteria
    • Schneider, D., and R. E. Lenski. 2004. Dynamics of insertion sequence elements during experimental evolution of bacteria. Res. Microbiol. 155:319-327.
    • (2004) Res. Microbiol , vol.155 , pp. 319-327
    • Schneider, D.1    Lenski, R.E.2
  • 39
    • 0031659778 scopus 로고    scopus 로고
    • Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum
    • Tauch, A., T. Z. Zheng, A. Puhler, and J. Kalinowski. 1998. Corynebacterium striatum chloramphenicol resistance transposon Tn5564: genetic organization and transposition in Corynebacterium glutamicum. Plasmid 40:126-139.
    • (1998) Plasmid , vol.40 , pp. 126-139
    • Tauch, A.1    Zheng, T.Z.2    Puhler, A.3    Kalinowski, J.4
  • 40
    • 0027318131 scopus 로고
    • Development of a native plasmid as a cloning vector in Clavibacter xyli subsp. cynodontis
    • Taylor, J., R. S. Stearman, and B. B. Uratani. 1993. Development of a native plasmid as a cloning vector in Clavibacter xyli subsp. cynodontis. Plasmid 29:241-244.
    • (1993) Plasmid , vol.29 , pp. 241-244
    • Taylor, J.1    Stearman, R.S.2    Uratani, B.B.3
  • 41
    • 34247870812 scopus 로고    scopus 로고
    • Yu, B., Q. W. Shen, and G. J. Zhu. 2005. An improved method for integrative electrotransformation of Corynebacterium glutamicum with xenogenetic DNA. Chin. Biotechnol. 25:78-81.
    • Yu, B., Q. W. Shen, and G. J. Zhu. 2005. An improved method for integrative electrotransformation of Corynebacterium glutamicum with xenogenetic DNA. Chin. Biotechnol. 25:78-81.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.