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Volumn 104, Issue 1, 2002, Pages 48-53

Evidence for a prokaryotic insertion-sequence contamination in eukaryotic sequences registered in different databases

Author keywords

BAC libraries; IS10; Tn10

Indexed keywords

BACTERIA; CLONING; CONTAMINATION; DNA; ESCHERICHIA COLI; GENES; VIRUSES;

EID: 0347297279     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220200005     Document Type: Article
Times cited : (8)

References (22)
  • 2
    • 0025998564 scopus 로고
    • Genetic evidence against intramolecuar rejoining of the donor DNA molecule following IS10 transposition
    • Bender J, Kuo J, Kleckner N (1991) Genetic evidence against intramolecuar rejoining of the donor DNA molecule following IS10 transposition. Genetics 128:687-694
    • (1991) Genetics , vol.128 , pp. 687-694
    • Bender, J.1    Kuo, J.2    Kleckner, N.3
  • 3
    • 0027286178 scopus 로고
    • Contamination of DNA database sequence entries with Escherichia coli insertion sequences
    • Binns M (1993) Contamination of DNA database sequence entries with Escherichia coli insertion sequences. Nucleic Acids Res 21:779
    • (1993) Nucleic Acids Res , vol.21 , pp. 779
    • Binns, M.1
  • 4
    • 0023032197 scopus 로고
    • Comparison of the spike precursor sequences of coronavirus IBV strains M41 and 6/82 with that of IBV Beaudette
    • Binns MM, Boursnell MEG, Tomley FM, Brown TDK (1986) Comparison of the spike precursor sequences of coronavirus IBV strains M41 and 6/82 with that of IBV Beaudette. J Gen Virol 67:2825-2831
    • (1986) J Gen Virol , vol.67 , pp. 2825-2831
    • Binns, M.M.1    Boursnell, M.E.G.2    Tomley, F.M.3    Brown, T.D.K.4
  • 5
    • 0026516892 scopus 로고
    • One-hour downward alkaline capillary transfer for blotting of DNA and RNA
    • Chomczynsky P (1992) One-hour downward alkaline capillary transfer for blotting of DNA and RNA. Anal Biochem 201:134-139
    • (1992) Anal Biochem , vol.201 , pp. 134-139
    • Chomczynsky, P.1
  • 6
    • 0028999733 scopus 로고
    • Intermolecular transposition of IS10 causes coupled homologous recombination at the transposition site
    • Eichenbaum Z, Livneh Z (1995) Intermolecular transposition of IS10 causes coupled homologous recombination at the transposition site. Genetics 140:861-874
    • (1995) Genetics , vol.140 , pp. 861-874
    • Eichenbaum, Z.1    Livneh, Z.2
  • 7
    • 0031829602 scopus 로고    scopus 로고
    • UV light induces IS10 transposition in Escherichia coli
    • Eichenbaum Z, Livneh Z (1998) UV light induces IS10 transposition in Escherichia coli. Genetics 149:1173-1181
    • (1998) Genetics , vol.149 , pp. 1173-1181
    • Eichenbaum, Z.1    Livneh, Z.2
  • 8
    • 0031053015 scopus 로고    scopus 로고
    • Incognito rRNA and rDNA in databases and libraries
    • Gonzalez IL, Sylvester JE (1997) Incognito rRNA and rDNA in databases and libraries. Genome Res 7:65-70
    • (1997) Genome Res , vol.7 , pp. 65-70
    • Gonzalez, I.L.1    Sylvester, J.E.2
  • 9
    • 0020062697 scopus 로고
    • A symmetrical six-base pair target site sequence determines Tn10 insertion specificity
    • Halling SM, Kleckner N (1982) A symmetrical six-base pair target site sequence determines Tn10 insertion specificity. Cell 28:155-163
    • (1982) Cell , vol.28 , pp. 155-163
    • Halling, S.M.1    Kleckner, N.2
  • 11
    • 0031439607 scopus 로고    scopus 로고
    • DNA sequencing and comparative sequence analysis reveal that the Escherichia coli genomic DNA may replace the target DNA during molecular cloning: Evidence for the erroneous assembly of E. coli DNA into database sequences
    • Jha PK, Sarkar S (1997) DNA sequencing and comparative sequence analysis reveal that the Escherichia coli genomic DNA may replace the target DNA during molecular cloning: Evidence for the erroneous assembly of E. coli DNA into database sequences. Comp Biochem Physiol 118:333-339
    • (1997) Comp Biochem Physiol , vol.118 , pp. 333-339
    • Jha, P.K.1    Sarkar, S.2
  • 13
    • 0029655788 scopus 로고    scopus 로고
    • Tn10 and IS10 transposition and chromosome rearrangements: Mechanism and regulation in vivo and in vitro
    • Saedler H, Gierl A (eds). Springer, Berlin
    • Kleckner N, Chalmers RM, Kwon D, Sakai J, Bolland S (1996) Tn10 and IS10 transposition and chromosome rearrangements: Mechanism and regulation in vivo and in vitro. In Saedler H, Gierl A (eds) Transposable Elements. Springer, Berlin, pp 49-82
    • (1996) Transposable Elements , pp. 49-82
    • Kleckner, N.1    Chalmers, R.M.2    Kwon, D.3    Sakai, J.4    Bolland, S.5
  • 14
    • 0033049747 scopus 로고    scopus 로고
    • A rapid algorithm for sequence database comparisons: Application to the identification of vector contamination in the EMBL databases
    • Miller C, Gurd J, Brass A (1999) A rapid algorithm for sequence database comparisons: Application to the identification of vector contamination in the EMBL databases. Bioinformatics 15:111-121
    • (1999) Bioinformatics , vol.15 , pp. 111-121
    • Miller, C.1    Gurd, J.2    Brass, A.3
  • 15
    • 0034062567 scopus 로고    scopus 로고
    • A method for cloning restriction fragments containing the termini of BAC inserts
    • Plyler TR, Vallejos CE (2000) A method for cloning restriction fragments containing the termini of BAC inserts. BioTechniques 28:1012-1018
    • (2000) BioTechniques , vol.28 , pp. 1012-1018
    • Plyler, T.R.1    Vallejos, C.E.2
  • 16
    • 0025755216 scopus 로고
    • IS10 promotes formation of adjacent deletions at low frequency
    • Roberts D, Ascherman D, Kleckner N (1991) IS10 promotes formation of adjacent deletions at low frequency Genetics 128:37-43
    • (1991) Genetics , vol.128 , pp. 37-43
    • Roberts, D.1    Ascherman, D.2    Kleckner, N.3
  • 18
    • 0033011552 scopus 로고    scopus 로고
    • Establishing a method of vector contamination identification in database sequences
    • Seluja GA, Farmer A, McLeod M, Harger C, Schad PA (1999) Establishing a method of vector contamination identification in database sequences. Bioinformatics 15:106-110
    • (1999) Bioinformatics , vol.15 , pp. 106-110
    • Seluja, G.A.1    Farmer, A.2    McLeod, M.3    Harger, C.4    Schad, P.A.5
  • 19
    • 0026604410 scopus 로고
    • Spontaneous transposition in the bacteriophage λcro gene residing on a plasmid
    • Skaliter R, Eichenbaum Z, Shwartz H, Ascarelli-Goel R, Livneh Z (1992) Spontaneous transposition in the bacteriophage λcro gene residing on a plasmid. Murat Res 267:139-151
    • (1992) Murat Res , vol.267 , pp. 139-151
    • Skaliter, R.1    Eichenbaum, Z.2    Shwartz, H.3    Ascarelli-Goel, R.4    Livneh, Z.5
  • 20
    • 0016700864 scopus 로고
    • Detection of specific sequences among DNA fragments separated by gel electrophoresis
    • Southern TM (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98:503-517
    • (1975) J Mol Biol , vol.98 , pp. 503-517
    • Southern, T.M.1
  • 21
    • 0345442485 scopus 로고    scopus 로고
    • Vector for IS element entrapment and functional characterization based on turning on expression of distal promoterless genes
    • Szevernyi I, Hodel A, Arber W, Olasz F (1996) Vector for IS element entrapment and functional characterization based on turning on expression of distal promoterless genes. Gene 174:103-110
    • (1996) Gene , vol.174 , pp. 103-110
    • Szevernyi, I.1    Hodel, A.2    Arber, W.3    Olasz, F.4
  • 22
    • 0033180242 scopus 로고    scopus 로고
    • Construction and characterization of a common bean bacterial artificial chromosome library
    • Vanhouten W, Mackenzie SA (1999) Construction and characterization of a common bean bacterial artificial chromosome library. Plant Mol Biol 40:977-983
    • (1999) Plant Mol Biol , vol.40 , pp. 977-983
    • Vanhouten, W.1    Mackenzie, S.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.