-
1
-
-
0034972743
-
Trans-3-chloroacrylic acid dehalogenase from pseudomonas pavonaceae 170 shares structural and mechanistic similarities with 4-oxalocrotonate tautomerase
-
DOI 10.1128/JB.183.14.4269-4277.2001
-
Poelarends, G. J., Saunier, R., and Janssen, D. B. (2001) trans -3-Chloroacrylic acid dehalogenase from Pseudomonas pa v onaceae 170 shares structural and mechanistic similarities with 4-oxalocrotonate tautomerase J. Bacteriol. 183, 4269-4277 (Pubitemid 32568079)
-
(2001)
Journal of Bacteriology
, vol.183
, Issue.14
, pp. 4269-4277
-
-
Poelarends, G.J.1
Saunier, R.2
Janssen, D.B.3
-
2
-
-
0041846667
-
Reactions of trans-3-chloroacrylic acid dehalogenase with acetylene substrates: Consequences of and evidence for a hydration reaction
-
DOI 10.1021/bi034598+
-
Wang, S. C., Person, M. D., Johnson, W. H., Jr., and Whitman, C. P. (2003) Reactions of trans -3-chloroacrylic acid dehalogenase with acetylene substrates: Consequences of and evidence for a hydration reaction Biochemistry 42, 8762-8773 (Pubitemid 36899820)
-
(2003)
Biochemistry
, vol.42
, Issue.29
, pp. 8762-8773
-
-
Wang, S.C.1
Person, M.D.2
Johnson Jr., W.H.3
Whitman, C.P.4
-
3
-
-
1642576243
-
Cloning, Expression, and Characterization of a cis-3-Chloroacrylic Acid Dehalogenase: Insights into the Mechanistic, Structural, and Evolutionary Relationship between Isomer-Specific 3-Chloroacrylic Acid Dehalogenases
-
DOI 10.1021/bi0355948
-
Poelarends, G. J., Serrano, H., Person, M. D., Johnson, W. H., Jr., Murzin, A. G., and Whitman, C. P. (2004) Cloning, expression, and characterization of a cis -3-chloroacrylic acid dehalogenase: Insights into the mechanistic, structural, and evolutionary relationship between isomer-specific 3-chloroacrylic acid dehalogenases Biochemistry 43, 759-772 (Pubitemid 38114064)
-
(2004)
Biochemistry
, vol.43
, Issue.3
, pp. 759-772
-
-
Poelarends, G.J.1
Serrano, H.2
Person, M.D.3
Johnson Jr., W.H.4
Murzin, A.G.5
Whitman, C.P.6
-
4
-
-
0026398921
-
Bacterial degradation of 3-chloroacrylic acid and the characterization of cis - And trans -specific dehalogenases
-
van Hylckama Vlieg, J. E. T. and Janssen, D. B. (1992) Bacterial degradation of 3-chloroacrylic acid and the characterization of cis-and trans -specific dehalogenases Biodegradation 2, 139-150
-
(1992)
Biodegradation
, vol.2
, pp. 139-150
-
-
Van Hylckama Vlieg, J.E.T.1
Janssen, D.B.2
-
5
-
-
0031879208
-
Degradation of 1,3-dichloropropene by Pseudomonas cichorii 170
-
Poelarends, G. J., Wilkens, M., Larkin, M. J., van Elsas, J. D., and Janssen, D. B. (1998) Degradation of 1,3-dichloropropene by Pseudomonas cichorii 170 Appl. Environ. Microbiol. 64, 2931-2936 (Pubitemid 28363164)
-
(1998)
Applied and Environmental Microbiology
, vol.64
, Issue.8
, pp. 2931-2936
-
-
Poelarends, G.J.1
Wilkens, M.2
Larkin, M.J.3
Van Elsas, J.D.4
Janssen, D.B.5
-
6
-
-
4644358158
-
Evolution of enzymatic activity in the tautomerase superfamily: Mechanistic and structural studies of the 1,3-dichloropropene catabolic enzymes
-
DOI 10.1016/j.bioorg.2004.05.006, PII S004520680400029X, Mechanic Enzymology
-
Poelarends, G. J. and Whitman, C. P. (2004) Evolution of enzymatic activity in the tautomerase superfamily: Mechanistic and structural studies of the 1,3-dichloropropene catabolic enzymes Bioorg. Chem. 32, 376-392 (Pubitemid 39277444)
-
(2004)
Bioorganic Chemistry
, vol.32
, Issue.5
, pp. 376-392
-
-
Poelarends, G.J.1
Whitman, C.P.2
-
7
-
-
56549088539
-
The chemical versatility of the β-α-β fold: Catalytic promiscuity and divergent evolution in the tautomerase superfamily
-
Poelarends, G. J., Puthan Veetil, V., and Whitman, C. P. (2008) The chemical versatility of the β-α-β fold: catalytic promiscuity and divergent evolution in the tautomerase superfamily Cell. Mol. Life Sci. 65, 3606-3618
-
(2008)
Cell. Mol. Life Sci.
, vol.65
, pp. 3606-3618
-
-
Poelarends, G.J.1
Puthan Veetil, V.2
Whitman, C.P.3
-
8
-
-
79953704662
-
Mechanistic and structural studies of microbial dehalogenases: How Nature cleaves a carbon-halogen bond
-
Mander, L. N. and Liu, H.-W., Eds.), Elsevier, Oxford, UK.
-
Poelarends, G. J. and Whitman, C. P. (2010) Mechanistic and structural studies of microbial dehalogenases: How Nature cleaves a carbon-halogen bond, in Comprehensive Natural Products II: Chemistry and Biology (Mander, L. N. and Liu, H.-W., Eds.) Volume 8, pp 89 - 123, Elsevier, Oxford, UK.
-
(2010)
Comprehensive Natural Products II: Chemistry and Biology
, vol.8
, pp. 89-123
-
-
Poelarends, G.J.1
Whitman, C.P.2
-
9
-
-
1642483053
-
The X-ray Structure of trans-3-Chloroacrylic Acid Dehalogenase Reveals a Novel Hydration Mechanism in the Tautomerase Superfamily
-
DOI 10.1074/jbc.M311966200
-
de Jong, R. M., Brugman, W., Poelarends, G. J., Whitman, C. P., and Dijkstra, B. W. (2004) The X-ray structure of trans -3-chloroacrylic acid dehalogenase reveals a novel hydration mechanism in the tautomerase superfamily J. Biol. Chem. 279, 11546-11552 (Pubitemid 38401655)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.12
, pp. 11546-11552
-
-
De Jong, R.M.1
Brugman, W.2
Poelarends, G.J.3
Whitman, C.P.4
Dijkstra, B.W.5
-
10
-
-
1842531456
-
The Roles of Active-Site Residues in the Catalytic Mechanism of trans-3-Chloroacrylic Acid Dehalogenase: A Kinetic, NMR, and Mutational Analysis
-
DOI 10.1021/bi030241u
-
Azurmendi, H. F., Wang, S. C., Massiah, M. A., Poelarends, G. J., Whitman, C. P., and Mildvan, A. S. (2004) The roles of active site residues in the catalytic mechanism of trans -3-chloroacrylic acid dehalogenase: A kinetic, NMR, and mutational analysis Biochemistry 43, 4082-4091 (Pubitemid 38445627)
-
(2004)
Biochemistry
, vol.43
, Issue.14
, pp. 4082-4091
-
-
Azurmendi, H.F.1
Wang, S.C.2
Massiah, M.A.3
Poelarends, G.J.4
Whitman, C.P.5
Mildvan, A.S.6
-
11
-
-
2642526986
-
Stereospecific alkylation of cis-3-chloroacrylic acid dehalogenase by (R)-oxirane-2-carboxylate: Analysis and mechanistic implications
-
DOI 10.1021/bi049823h
-
Poelarends, G. J., Serrano, H., Johnson, W. H., Jr., and Whitman, C. P. (2004) Stereospecific alkylation of cis -chloroacrylic acid dehalogenase by (R)-oxirane-2-carboxylate: Analysis and mechanistic implications Biochemistry 43, 7187-7196 (Pubitemid 38720536)
-
(2004)
Biochemistry
, vol.43
, Issue.22
, pp. 7187-7196
-
-
Poelarends, G.J.1
Serrano, H.2
Johnson Jr., W.H.3
Whitman, C.P.4
-
12
-
-
34047269260
-
Crystal structures of native and inactivated cis-3-chloroacrylic acid dehalogenase: Structural basis for substrate specificity and inactivation by (R)-oxirane-2-carboxylate
-
DOI 10.1074/jbc.M608134200
-
de Jong, R. M., Bazzacco, P., Poelarends, G. J., Johnson, W. H., Jr., Kim, Y.-J., Burks, E. A., Serrano, H., Thunnissen, A.-M. W. H., Whitman, C. P., and Dijkstra, B. W. (2007) Crystal structures of native and inactivated cis -3-chloroacrylic acid dehalogenase: Structural basis for substrate specificity and inactivation by (R)-oxirane-2-carboxylate J. Biol. Chem. 282, 2440-2449 (Pubitemid 47076762)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.4
, pp. 2440-2449
-
-
De Jong, R.M.1
Bazzacco, P.2
Poelarends, G.J.3
Johnson Jr., W.H.4
Yoon, J.K.5
Burks, E.A.6
Serrano, H.7
Thunnissen, A.-M.W.H.8
Whitman, C.P.9
Dijkstra, B.W.10
-
13
-
-
71549150303
-
Pre-steady-state kinetic analysis of cis -3-chloroacrylic acid dehalogenase: Analysis and implications
-
Robertson, B. A., Schroeder, G. K., Jin, Z., Johnson, K. A., and Whitman, C. P. (2009) Pre-steady-state kinetic analysis of cis -3-chloroacrylic acid dehalogenase: analysis and implications Biochemistry 48, 11737-11744
-
(2009)
Biochemistry
, vol.48
, pp. 11737-11744
-
-
Robertson, B.A.1
Schroeder, G.K.2
Jin, Z.3
Johnson, K.A.4
Whitman, C.P.5
-
14
-
-
70350070123
-
Reaction mechanism of cis -3-chloroacrylic acid dehalogenase: A theoretical study
-
Sevastik, R., Whitman, C. P., and Himo, F. (2009) Reaction mechanism of cis -3-chloroacrylic acid dehalogenase: a theoretical study Biochemistry 48, 9641-9649
-
(2009)
Biochemistry
, vol.48
, pp. 9641-9649
-
-
Sevastik, R.1
Whitman, C.P.2
Himo, F.3
-
15
-
-
0036612878
-
The 4-oxalocrotonate tautomerase family of enzymes: How nature makes new enzymes using a β-α-β structural motif
-
DOI 10.1016/S0003-9861(02)00052-8, PII S0003986102000528
-
Whitman, C. P. (2002) The 4-oxalocrotonate tautomerase family of enzymes: How nature makes new enzymes using a β-α-β structural motif Arch. Biochem. Biophys. 402, 1-13 (Pubitemid 34848289)
-
(2002)
Archives of Biochemistry and Biophysics
, vol.402
, Issue.1
, pp. 1-13
-
-
Whitman, C.P.1
-
16
-
-
0024457019
-
Physically associated enzymes produce and metabolize 2-hydroxy-2,4- dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putida
-
Harayama, S., Rekik, M., Ngai, K.-L., and Ornston, L. N. (1989) Physically associated enzymes produce and metabolize 2-hydroxy-2,4-dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putida J. Bacteriol. 171, 6251-6258 (Pubitemid 19266947)
-
(1989)
Journal of Bacteriology
, vol.171
, Issue.11
, pp. 6251-6258
-
-
Harayama, S.1
Rekik, M.2
Ngai, K.-L.3
Ornston, L.N.4
-
17
-
-
0026713295
-
4-Oxalocrotonate tautomerase, an enzyme composed of 62 amino acid residues per monomer
-
Chen, L. H., Kenyon, G. L., Curtin, F., Harayama, S., Bembenek, M. E., Hajipour, G., and Whitman, C. P. (1992) 4-Oxalocrotonate tautomerase, an enzyme composed of 62 amino acid residues per monomer J. Biol. Chem. 267, 17716-17721
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 17716-17721
-
-
Chen, L.H.1
Kenyon, G.L.2
Curtin, F.3
Harayama, S.4
Bembenek, M.E.5
Hajipour, G.6
Whitman, C.P.7
-
18
-
-
0001600177
-
Chemical and enzymatic ketonization of 2-hydroxymuconate, a conjugated enol
-
Whitman, C. P., Aird, B. A., Gillespie, W. R., and Stolowich, N. J. (1991) Chemical and enzymatic ketonization of 2-hydroxymuconate, a conjugated enol J. Am. Chem. Soc. 113, 3154-3162
-
(1991)
J. Am. Chem. Soc.
, vol.113
, pp. 3154-3162
-
-
Whitman, C.P.1
Aird, B.A.2
Gillespie, W.R.3
Stolowich, N.J.4
-
19
-
-
35448939737
-
Kinetic and stereochemical analysis of YwhB, a 4-oxalocrotonate tautomerase homologue in Bacillus subtilis: Mechanistic implications for the YwhB- and 4-oxalocrotonate tautomerase-catalyzed reactions
-
DOI 10.1021/bi701231a
-
Wang, S. C., Johnson, W. H., Jr., Czerwinski, R. M., Stamps, S. L., and Whitman, C. P. (2007) Kinetic and stereochemical analysis of YwhB, a 4-oxalocrotonate tautomerase homologue in Bacillus subtilis: mechanistic implications for the YwhB- and 4-oxalocrotonate tautomerase-catalyzed reactions Biochemistry 46, 11919-11929 (Pubitemid 47623760)
-
(2007)
Biochemistry
, vol.46
, Issue.42
, pp. 11919-11929
-
-
Wang, S.C.1
Johnson Jr., W.H.2
Czerwinski, R.M.3
Stamps, S.L.4
Whitman, C.P.5
-
20
-
-
0344012191
-
The 4-Oxalocrotonate Tautomerase- and YwhB-Catalyzed Hydration of 3E-Haloacrylates: Implications for the Evolution of New Enzymatic Activities
-
DOI 10.1021/ja0370948
-
Wang, S. C., Johnson, W. H., Jr., and Whitman, C. P. (2003) The 4-oxalocrotonate tautomerase- and YwhB-catalyzed hydration of 3 E -haloacrylates: implications for evolution of new enzymatic activities J. Am. Chem. Soc. 125, 14282-14283 (Pubitemid 37452359)
-
(2003)
Journal of the American Chemical Society
, vol.125
, Issue.47
, pp. 14282-14283
-
-
Wang, S.C.1
Johnson Jr., W.H.2
Whitman, C.P.3
-
21
-
-
34548090241
-
Phenylpyruvate tautomerase activity of trans-3-chloroacrylic acid dehalogenase: Evidence for an enol intermediate in the dehalogenase reaction?
-
DOI 10.1021/bi7007189
-
Poelarends, G. J., Serrano, H., Johnson, W. H., Jr., and Whitman, C. P. (2007) The phenylpyruvate tautomerase activity of trans -3-chloroacrylic acid dehalogenase: evidence for an enol intermediate in the dehalogenase reaction? Biochemistry 46, 9596-9604 (Pubitemid 47291966)
-
(2007)
Biochemistry
, vol.46
, Issue.33
, pp. 9596-9604
-
-
Poelarends, G.J.1
Johnson Jr., W.H.2
Serrano, H.3
Whitman, C.P.4
-
22
-
-
48649107864
-
Characterization of Cg10062 from Corynebacterium glutamicum: Implications for the evolution of cis -3-chloroacrylic acid dehalogenase activity in the tautomerase superfamily
-
Poelarends, G. J., Serrano, H., Person, M. D., Johnson, W. H., Jr., and Whitman, C. P. (2008) Characterization of Cg10062 from Corynebacterium glutamicum: implications for the evolution of cis -3-chloroacrylic acid dehalogenase activity in the tautomerase superfamily Biochemistry 47, 8139-8147
-
(2008)
Biochemistry
, vol.47
, pp. 8139-8147
-
-
Poelarends, G.J.1
Serrano, H.2
Person, M.D.3
Johnson Jr., W.H.4
Whitman, C.P.5
-
23
-
-
33751221972
-
The latent promiscuity of newly identified microbial lactonases is linked to a recently diverged phosphotriesterase
-
DOI 10.1021/bi061268r
-
Afriat, L., Roodveldt, C., Manco, G., and Tawfik, D. S. (2006) The latent promiscuity of newly identified microbial lactonases is linked to a recently diverged phosphotriesterase Biochemistry 45, 13677-13686 (Pubitemid 44788738)
-
(2006)
Biochemistry
, vol.45
, Issue.46
, pp. 13677-13686
-
-
Afriat, L.1
Roodveldt, C.2
Manco, G.3
Tawfik, D.S.4
-
24
-
-
77953623874
-
Enzyme promiscuity: A mechanistic and evolutionary perspective
-
Khersonsky, O. and Tawfik, D. S. (2010) Enzyme promiscuity: a mechanistic and evolutionary perspective Annu. Rev. Biochem. 79, 471-505
-
(2010)
Annu. Rev. Biochem.
, vol.79
, pp. 471-505
-
-
Khersonsky, O.1
Tawfik, D.S.2
-
25
-
-
77956151080
-
Structural and functional characterization of a macrophage migration inhibitory factor homologue from the marine cyanobacterium Prochlorococcus marinus
-
Wasiel, A. A., Rozeboom, H. J., Hauke, D., Baas, B. J., Zandvoort, E., Quax, W. J., Thunnissen, A.-M. W. H., and Poelarends, G. J. (2010) Structural and functional characterization of a macrophage migration inhibitory factor homologue from the marine cyanobacterium Prochlorococcus marinus Biochemistry 49, 7572-7581
-
(2010)
Biochemistry
, vol.49
, pp. 7572-7581
-
-
Wasiel, A.A.1
Rozeboom, H.J.2
Hauke, D.3
Baas, B.J.4
Zandvoort, E.5
Quax, W.J.6
Thunnissen, A.-M.W.H.7
Poelarends, G.J.8
-
26
-
-
0004136246
-
-
2 nd ed., Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
-
Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2 nd ed., Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
27
-
-
0001479670
-
A simple ultraviolet spectrophotometric method for the determination of protein
-
Waddell, W. J. (1956) A simple ultraviolet spectrophotometric method for the determination of protein J. Lab. Clin. Med. 48, 311-314
-
(1956)
J. Lab. Clin. Med.
, vol.48
, pp. 311-314
-
-
Waddell, W.J.1
-
28
-
-
79952028974
-
Systematic screening for catalytic promiscuity in 4-oxalocrotonate tautomerase: Enamine formation and aldolase activity
-
Zandvoort, E., Baas, B. J., Quax, W. J., and Poelarends, G. J. (2011) Systematic screening for catalytic promiscuity in 4-oxalocrotonate tautomerase: Enamine formation and aldolase activity ChemBioChem 12, 602-609
-
(2011)
ChemBioChem
, vol.12
, pp. 602-609
-
-
Zandvoort, E.1
Baas, B.J.2
Quax, W.J.3
Poelarends, G.J.4
-
29
-
-
0021798672
-
Purification and characterization of hydrolytic haloalkane dehalogenase from Xanthobacter autotrophicus GJ10
-
Keuning, S., Janssen, D. B., and Whitholt, B. (1985) Purification and characterization of hydrolytic haloalkane dehalogenase from Xanthobacter autotrophicus GJ10 J. Bacteriol. 163, 635-639 (Pubitemid 15008789)
-
(1985)
Journal of Bacteriology
, vol.163
, Issue.2
, pp. 635-639
-
-
Keuning, S.1
Janssen, D.B.2
Witholt, B.3
-
30
-
-
0345628007
-
Inactivation of 4-oxalocrotonate tautomerase by 2-oxo-3-pentynoate
-
DOI 10.1021/bi971608w
-
Johnson, W. H., Jr., Czerwinski, R. M., Fitzgerald, M. C., and Whitman, C. P. (1997) Inactivation of 4-oxalocrotonate tautomerase by 2-oxo-3-pentynoate Biochemistry 36, 15724-15732 (Pubitemid 28027371)
-
(1997)
Biochemistry
, vol.36
, Issue.50
, pp. 15724-15732
-
-
Johnson Jr., W.H.1
Czerwinski, R.M.2
Fitzgerald, M.C.3
Whitman, C.P.4
-
31
-
-
0015452895
-
Staphylococcal protease: A proteolytic enzyme specific for glutamoyl bonds
-
Houmard, J. and Drapeau, G. R. (1972) Staphylococcal protease: a proteolytic enzyme specific for glutamoyl bonds Proc. Natl. Acad. Sci. U.S.A. 69, 3506-3509
-
(1972)
Proc. Natl. Acad. Sci. U.S.A.
, vol.69
, pp. 3506-3509
-
-
Houmard, J.1
Drapeau, G.R.2
-
32
-
-
77953678852
-
Kinetic and structural characterization of a heterohexamer 4-oxalocrotonate tautomerase from Chloroflexus aurantiacus J-10-fl: Implications for functional and structural diversity in the tautomerase superfamily
-
Burks, E. A., Fleming, C. D., Mesecar, A. D., Whitman, C. P., and Pegan, S. D. (2010) Kinetic and structural characterization of a heterohexamer 4-oxalocrotonate tautomerase from Chloroflexus aurantiacus J-10-fl: Implications for functional and structural diversity in the tautomerase superfamily Biochemistry 49, 5016-5027
-
(2010)
Biochemistry
, vol.49
, pp. 5016-5027
-
-
Burks, E.A.1
Fleming, C.D.2
Mesecar, A.D.3
Whitman, C.P.4
Pegan, S.D.5
-
33
-
-
0030064737
-
Catalytic role of the amino-terminal proline in 4-oxalocrotonate tautomerase: Affinity labeling and heteronuclear NMR studies
-
DOI 10.1021/bi951077g
-
Stivers, J. T., Abeygunawardana, C., Mildvan, A. S., Hajipour, G., Whitman, C. P., and Chen, L. H. (1996) Catalytic role of the amino-terminal proline in 4-oxalocrotonate tautomerase: affinity labeling and heteronuclear NMR studies Biochemistry 35, 803-813 (Pubitemid 26034564)
-
(1996)
Biochemistry
, vol.35
, Issue.3
, pp. 803-813
-
-
Stivers, J.T.1
Abeygunawardana, C.2
Mildvan, A.S.3
Hajipour, G.4
Whitman, C.P.5
Chen, L.H.6
-
35
-
-
0030723733
-
Kinetic and structural effects of mutations of the catalytic amino- terminal proline in 4-oxalocrotonate tautomerase
-
DOI 10.1021/bi971545h
-
Czerwinski, R. M., Johnson, W. H., Jr., and Whitman, C. P. (1997) Kinetic and structural effects of mutations of the catalytic amino-terminal proline in 4-oxalocrotonate tautomerase Biochemistry 36, 14551-14560 (Pubitemid 27509947)
-
(1997)
Biochemistry
, vol.36
, Issue.47
, pp. 14551-14560
-
-
Czerwinski, R.M.1
Johnson Jr., W.H.2
Whitman, C.P.3
Harris, T.K.4
Abeygunawardana, C.5
Mildvan, A.S.6
|