-
1
-
-
0013953164
-
Glucose effect and the galactose enzymes of Escherichia coli: Correlation between glucose inhibition of induction and inducer transport
-
Adhya S, Echols H (1966) Glucose effect and the galactose enzymes of Escherichia coli: correlation between glucose inhibition of induction and inducer transport. J Bacteriol 92:601-608
-
(1966)
J Bacteriol
, vol.92
, pp. 601-608
-
-
Adhya, S.1
Echols, H.2
-
2
-
-
0018358652
-
Modulation of the two promoters of the galactose operon of Escherichia coli
-
Adhya S, Miller W (1979) Modulation of the two promoters of the galactose operon of Escherichia coli. Nature 279:492-494
-
(1979)
Nature
, vol.279
, pp. 492-494
-
-
Adhya, S.1
Miller, W.2
-
3
-
-
0032459035
-
Transcription regulation by repressosome and by RNA polymerase contact
-
Adhya S, Geanacopoulos M, Lewis DE, Roy S, Aki T (1998) Transcription regulation by repressosome and by RNA polymerase contact. Cold Spring Harb Symp Quant Biol 63:1-9
-
(1998)
Cold Spring Harb Symp Quant Biol
, vol.63
, pp. 1-9
-
-
Adhya, S.1
Geanacopoulos, M.2
Lewis, D.E.3
Roy, S.4
Aki, T.5
-
4
-
-
0030928287
-
Repressor induced site-specific binding of HU for transcriptional regulation
-
Aki T, Adhya S (1997) Repressor induced site-specific binding of HU for transcriptional regulation. EMBO J 16:3666-3674
-
(1997)
EMBO J
, vol.16
, pp. 3666-3674
-
-
Aki, T.1
Adhya, S.2
-
5
-
-
0030072556
-
Histone-like protein HU as a specific transcriptional regulator: Co-factor role in repression of gal transcription by GAL repressor
-
Aki T, Choy HE, Adhya S (1996) Histone-like protein HU as a specific transcriptional regulator: co-factor role in repression of gal transcription by GAL repressor. Genes Cells 1:179-188
-
(1996)
Genes Cells
, vol.1
, pp. 179-188
-
-
Aki, T.1
Choy, H.E.2
Adhya, S.3
-
6
-
-
0026058176
-
Dimer-to-tetramer assembly of Lac repressor involves a leucine heptad repeat
-
Alberti S, Oehler S, von Wilcken-Bergmann B, Kramer H, Muller-Hill B (1991) Dimer-to-tetramer assembly of Lac repressor involves a leucine heptad repeat. New Biol 3:57-62
-
(1991)
New Biol
, vol.3
, pp. 57-62
-
-
Alberti, S.1
Oehler, S.2
Von Wilcken-Bergmann, B.3
Kramer, H.4
Muller-Hill, B.5
-
7
-
-
0027297241
-
Genetic analysis of the leucine heptad repeats of Lac repressor: Evidence for a 4-helical bundle
-
Alberti S, Oehler S, von Wilcken-Bergmann B, Muller-Hill B (1993) Genetic analysis of the leucine heptad repeats of Lac repressor: evidence for a 4-helical bundle. EMBO J 12:3227-3236
-
(1993)
EMBO J
, vol.12
, pp. 3227-3236
-
-
Alberti, S.1
Oehler, S.2
Von Wilcken-Bergmann, B.3
Muller-Hill, B.4
-
8
-
-
0026019440
-
HU and IHF, two homologous histone-like proteins of Escherichia coli, form different protein-DNA complexes with short DNA fragments
-
Bonnefoy E, Rouvière-Yaniv J (1991) HU and IHF, two homologous histone-like proteins of Escherichia coli, form different protein-DNA complexes with short DNA fragments. EMBO J 10:687-696
-
(1991)
EMBO J
, vol.10
, pp. 687-696
-
-
Bonnefoy, E.1
Rouvière-Yaniv, J.2
-
9
-
-
0028136642
-
DNA-binding parameters of the HU protein of Escherichia coli to cruciform DNA
-
Bonnefoy E, Takahashi M, Yaniv JR (1994) DNA-binding parameters of the HU protein of Escherichia coli to cruciform DNA. J Mol Biol 242:116-129
-
(1994)
J Mol Biol
, vol.242
, pp. 116-129
-
-
Bonnefoy, E.1
Takahashi, M.2
Yaniv, J.R.3
-
10
-
-
0023645101
-
DNA supercoiling promotes formation of a bent repression loop in lac DNA
-
Borowiec JA, Zhang L, Sasse-Dwight S, Gralla JD (1987) DNA supercoiling promotes formation of a bent repression loop in lac DNA. J Mol Biol 196:101-111
-
(1987)
J Mol Biol
, vol.196
, pp. 101-111
-
-
Borowiec, J.A.1
Zhang, L.2
Sasse-Dwight, S.3
Gralla, J.D.4
-
11
-
-
0027948942
-
Dependence of lactose metabolism upon mutarotase encoded in the gal operon in Escherichia coli
-
Bouffard GG, Rudd KE, Adhya SL (1994) Dependence of lactose metabolism upon mutarotase encoded in the gal operon in Escherichia coli. J Mol Biol 244:269-278
-
(1994)
J Mol Biol
, vol.244
, pp. 269-278
-
-
Bouffard, G.G.1
Rudd, K.E.2
Adhya, S.L.3
-
12
-
-
0025273827
-
Interaction of the Escherichia coli Gal repressor protein with its DNA operators in vitro
-
Brenowitz M, Jamison E, Majumdar A, Adhya S (1990) Interaction of the Escherichia coli Gal repressor protein with its DNA operators in vitro. Biochemistry 29:3374-3383
-
(1990)
Biochemistry
, vol.29
, pp. 3374-3383
-
-
Brenowitz, M.1
Jamison, E.2
Majumdar, A.3
Adhya, S.4
-
13
-
-
0026060743
-
DNA-binding properties of a lac repressor mutant incapable of forming tetramers
-
Brenowitz M, Mandal N, Pickar A, Jamison E, Adhya S (1991) DNA-binding properties of a lac repressor mutant incapable of forming tetramers. J Biol Chem 266:1281-1288
-
(1991)
J Biol Chem
, vol.266
, pp. 1281-1288
-
-
Brenowitz, M.1
Mandal, N.2
Pickar, A.3
Jamison, E.4
Adhya, S.5
-
14
-
-
0010523226
-
Regulatory mechanisms in the biosynthesis of the enzymes of galactose metabolism in Escherichia coli K 12. II. The genetic determinism of the regulation
-
Buttin G (1963) Regulatory mechanisms in the biosynthesis of the enzymes of galactose metabolism in Escherichia coli K 12. II. the genetic determinism of the regulation. J Mol Biol 7:183-205
-
(1963)
J Mol Biol
, vol.7
, pp. 183-205
-
-
Buttin, G.1
-
15
-
-
0028901705
-
HU protein of Escherichia coli binds specifically to DNA that contains single-strand breaks or gaps
-
Castaing B, Zelwer C, Laval J, Boiteux S (1995) HU protein of Escherichia coli binds specifically to DNA that contains single-strand breaks or gaps. J Biol Chem 270:10291-10296
-
(1995)
J Biol Chem
, vol.270
, pp. 10291-10296
-
-
Castaing, B.1
Zelwer, C.2
Laval, J.3
Boiteux, S.4
-
16
-
-
0018967521
-
Neutron scattering studies of lac repressor
-
Charlier M, Maurizot JC, Zaccai G (1980) Neutron scattering studies of lac repressor. Nature 286:423-425
-
(1980)
Nature
, vol.286
, pp. 423-425
-
-
Charlier, M.1
Maurizot, J.C.2
Zaccai, G.3
-
17
-
-
5644235233
-
Twisting DNA: Single molecule studies
-
Charvin G, Allemand JF, Strick TR, Bensimon D, Croquette V (2004) Twisting DNA: single molecule studies. Contemp Phys 45:383-403
-
(2004)
Contemp Phys
, vol.45
, pp. 383-403
-
-
Charvin, G.1
Allemand, J.F.2
Strick, T.R.3
Bensimon, D.4
Croquette, V.5
-
18
-
-
0026474571
-
Control of gal transcription through DNA looping: Inhibition of the initial transcribing complex
-
Choy HE, Adhya S (1992) Control of gal transcription through DNA looping: inhibition of the initial transcribing complex. Proc Natl Acad Sci USA 89:11264-11268
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 11264-11268
-
-
Choy, H.E.1
Adhya, S.2
-
19
-
-
0029153579
-
Repression and activation of transcription by Gal and Lac repressors: Involvement of alpha subunit of RNA polymerase
-
Choy HE, Park SW, Aki T, Parrack P, Fujita N, Ishihama A, Adhya S (1995a) Repression and activation of transcription by Gal and Lac repressors: involvement of alpha subunit of RNA polymerase. EMBO J 14:4523-4529
-
(1995)
EMBO J
, vol.14
, pp. 4523-4529
-
-
Choy, H.E.1
Park, S.W.2
Aki, T.3
Parrack, P.4
Fujita, N.5
Ishihama, A.6
Adhya, S.7
-
20
-
-
0029160889
-
Transcription regulation by inflexibility of promoter DNA in a looped complex
-
Choy HE, Park SW, Parrack P, Adhya S (1995b) Transcription regulation by inflexibility of promoter DNA in a looped complex. Proc Natl Acad Sci USA 92:7327-7331
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 7327-7331
-
-
Choy, H.E.1
Park, S.W.2
Parrack, P.3
Adhya, S.4
-
21
-
-
0031587298
-
Repression and activation of promoter-bound RNA polymerase activity by Gal repressor
-
Choy HE, Hanger RR, Aki T, Mahoney M, Murakami K, Ishihama A, Adhya S (1997) Repression and activation of promoter-bound RNA polymerase activity by Gal repressor. J Mol Biol 272:293-300
-
(1997)
J Mol Biol
, vol.272
, pp. 293-300
-
-
Choy, H.E.1
Hanger, R.R.2
Aki, T.3
Mahoney, M.4
Murakami, K.5
Ishihama, A.6
Adhya, S.7
-
22
-
-
0021931495
-
Mechanism of transposition of bacteriophage Mu: Structure of a transposition intermediate
-
Craigie R, Mizuuchi K (1985) Mechanism of transposition of bacteriophage Mu: structure of a transposition intermediate. Cell 41:867-876
-
(1985)
Cell
, vol.41
, pp. 867-876
-
-
Craigie, R.1
Mizuuchi, K.2
-
23
-
-
0022321540
-
Two operator sites separated by 599 base pairs are required for deoR repression of the deo operon of Escherichia coli
-
Dandanell G, Hammer K (1985) Two operator sites separated by 599 base pairs are required for deoR repression of the deo operon of Escherichia coli. EMBO J 4:3333-3338
-
(1985)
EMBO J
, vol.4
, pp. 3333-3338
-
-
Dandanell, G.1
Hammer, K.2
-
24
-
-
0032522139
-
DNA bending: The prevalence of kinkiness and the virtues of normality
-
Dickerson RE (1998) DNA bending: the prevalence of kinkiness and the virtues of normality. Nucleic Acids Res 26:1906-1926
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 1906-1926
-
-
Dickerson, R.E.1
-
25
-
-
0002213084
-
The nucleoid
-
Neidhardt FC, Ingraham JL, Low KB, Magasanik B, Schaechter M, Umbarger HE eds, Washington, DC
-
Drlica K (1987) The nucleoid. In: Neidhardt FC, Ingraham JL, Low KB, Magasanik B, Schaechter M, Umbarger HE (eds) Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology. American Society for Microbiology, Washington, DC, pp 91-103
-
(1987)
Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology. American Society for Microbiology
, pp. 91-103
-
-
Drlica, K.1
-
27
-
-
0021771035
-
Deletion analysis of the Escherichia coli ara PC and PBAD promoters
-
Dunn TM, Schleif R (1984) Deletion analysis of the Escherichia coli ara PC and PBAD promoters. J Mol Biol 180:201-204
-
(1984)
J Mol Biol
, vol.180
, pp. 201-204
-
-
Dunn, T.M.1
Schleif, R.2
-
28
-
-
84883832837
-
Complementation, recombination, and suppression in galactose negative mutants of E. coli
-
Echols H, Reznichek J, Adhya S (1963) Complementation, recombination, and suppression in galactose negative mutants of E. coli. Proc Natl Acad Sci USA 50:286-293
-
(1963)
Proc Natl Acad Sci USA
, vol.50
, pp. 286-293
-
-
Echols, H.1
Reznichek, J.2
Adhya, S.3
-
29
-
-
0029004903
-
Crystal structure of lac repressor core tetramer and its implications for DNA looping
-
Friedman AM, Fischmann TO, Steitz TA (1995) Crystal structure of lac repressor core tetramer and its implications for DNA looping. Science 268:1721-1727
-
(1995)
Science
, vol.268
, pp. 1721-1727
-
-
Friedman, A.M.1
Fischmann, T.O.2
Steitz, T.A.3
-
30
-
-
0033563076
-
GalR mutants defective in repressosome formation
-
Geanacopoulos M, Vasmatzis G, Lewis DE, Roy S, Lee B, Adhya S (1999) GalR mutants defective in repressosome formation. Genes Dev 13:1251-1262
-
(1999)
Genes Dev
, vol.13
, pp. 1251-1262
-
-
Geanacopoulos, M.1
Vasmatzis, G.2
Lewis, D.E.3
Roy, S.4
Lee, B.5
Adhya, S.6
-
32
-
-
0022545056
-
DNA loops induced by cooperative binding of lambda repressor
-
Griffith J, Hochschild A, Ptashne M (1986) DNA loops induced by cooperative binding of lambda repressor. Nature 322:750-752
-
(1986)
Nature
, vol.322
, pp. 750-752
-
-
Griffith, J.1
Hochschild, A.2
Ptashne, M.3
-
33
-
-
0030581147
-
Localized DNA flexibility contributes to target site selection by DNA-bending proteins
-
Grove A, Galeone A, Mayol L, Geiduschek EP (1996) Localized DNA flexibility contributes to target site selection by DNA-bending proteins. J Mol Biol 260:120-125
-
(1996)
J Mol Biol
, vol.260
, pp. 120-125
-
-
Grove, A.1
Galeone, A.2
Mayol, L.3
Geiduschek, E.P.4
-
34
-
-
0013556017
-
Interaction of spatially separated protein-DNA complexes for control of gene expression: Operator conversions
-
Haber R, Adhya S (1988) Interaction of spatially separated protein-DNA complexes for control of gene expression: operator conversions. Proc Natl Acad Sci USA 85:9683-9687
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 9683-9687
-
-
Haber, R.1
Adhya, S.2
-
35
-
-
0023042032
-
Transcription of Escherichia coli ara in vitro. The cyclic AMP receptor protein requirement for PBAD induction that depends on the presence and orientation of the araO2 site
-
Hahn S, Hendrickson W, Schleif R (1986) Transcription of Escherichia coli ara in vitro. The cyclic AMP receptor protein requirement for PBAD induction that depends on the presence and orientation of the araO2 site. J Mol Biol 188:355-367
-
(1986)
J Mol Biol
, vol.188
, pp. 355-367
-
-
Hahn, S.1
Hendrickson, W.2
Schleif, R.3
-
36
-
-
0022461985
-
Homologous interactions of lambda repressor and lambda Cro with the lambda operator
-
Hochschild A, Ptashne M (1986) Homologous interactions of lambda repressor and lambda Cro with the lambda operator. Cell 44:925-933
-
(1986)
Cell
, vol.44
, pp. 925-933
-
-
Hochschild, A.1
Ptashne, M.2
-
37
-
-
0020621169
-
A control element within a structural gene: The gal operon of Escherichia coli
-
Irani MH, Orosz L, Adhya S (1983) A control element within a structural gene: the gal operon of Escherichia coli. Cell 32:783-788
-
(1983)
Cell
, vol.32
, pp. 783-788
-
-
Irani, M.H.1
Orosz, L.2
Adhya, S.3
-
39
-
-
0023003213
-
Genetic characterization of the gene hupB encoding the HU-1 protein of Escherichia coli
-
Kano Y, Wada M, Nagase T, Imamoto F (1986) Genetic characterization of the gene hupB encoding the HU-1 protein of Escherichia coli. Gene 45:37-44
-
(1986)
Gene
, vol.45
, pp. 37-44
-
-
Kano, Y.1
Wada, M.2
Nagase, T.3
Imamoto, F.4
-
40
-
-
0023413823
-
Cloning and sequencing of the HU-2 gene of Escherichia coli
-
Kano Y, Osato K, Wada M, Imamoto F (1987) Cloning and sequencing of the HU-2 gene of Escherichia coli. Mol Gen Genet 209:408-410
-
(1987)
Mol Gen Genet
, vol.209
, pp. 408-410
-
-
Kano, Y.1
Osato, K.2
Wada, M.3
Imamoto, F.4
-
41
-
-
0035449843
-
Recruitment of HU by piggyback: A special role of GalR in repressosome assembly
-
Kar S, Adhya S (2001) Recruitment of HU by piggyback: a special role of GalR in repressosome assembly. Genes Dev 15:2273-2281
-
(2001)
Genes Dev
, vol.15
, pp. 2273-2281
-
-
Kar, S.1
Adhya, S.2
-
42
-
-
0033057518
-
Supercoiling-dependent site-specific binding of HU to naked Mu DNA
-
Kobryn K, Lavoie BD, Chaconas G (1999) Supercoiling-dependent site-specific binding of HU to naked Mu DNA. J Mol Biol 289:777-784
-
(1999)
J Mol Biol
, vol.289
, pp. 777-784
-
-
Kobryn, K.1
Lavoie, B.D.2
Chaconas, G.3
-
43
-
-
0023333893
-
Lac repressor forms loops with linear DNA carrying two suitably spaced lac operators
-
Kramer H, Niemoller M, Amouyal M, Revet B, von Wilcken-Bergmann B, Muller-Hill B (1987) lac repressor forms loops with linear DNA carrying two suitably spaced lac operators. EMBO J 6:1481-1491
-
(1987)
EMBO J
, vol.6
, pp. 1481-1491
-
-
Kramer, H.1
Niemoller, M.2
Amouyal, M.3
Revet, B.4
Von Wilcken-Bergmann, B.5
Muller-Hill, B.6
-
44
-
-
2142855754
-
DNA supercoiling changes the spacing requirement of two lac operators for DNA loop formation with lac repressor
-
Kramer H, Amouyal M, Nordheim A, Muller-Hill B (1988) DNA supercoiling changes the spacing requirement of two lac operators for DNA loop formation with lac repressor. EMBO J 7:547-556
-
(1988)
EMBO J
, vol.7
, pp. 547-556
-
-
Kramer, H.1
Amouyal, M.2
Nordheim, A.3
Muller-Hill, B.4
-
45
-
-
0022566981
-
The upstream operator of the Escherichia coli galactose operon is sufficient for repression of transcription initiated at the cyclic AMP-stimulated promoter
-
Kuhnke G, Krause A, Heibach C, Gieske U, Fritz HJ, Ehring R (1986) The upstream operator of the Escherichia coli galactose operon is sufficient for repression of transcription initiated at the cyclic AMP-stimulated promoter. EMBO J 5:167-173
-
(1986)
EMBO J
, vol.5
, pp. 167-173
-
-
Kuhnke, G.1
Krause, A.2
Heibach, C.3
Gieske, U.4
Fritz, H.J.5
Ehring, R.6
-
46
-
-
0027729660
-
Site-specific HU binding in the Mu transpososome: Conversion of a sequence-independent DNA-binding protein into a chemical nuclease
-
Lavoie BD, Chaconas G (1993) Site-specific HU binding in the Mu transpososome: conversion of a sequence-independent DNA-binding protein into a chemical nuclease. Genes Dev 7:2510-2519
-
(1993)
Genes Dev
, vol.7
, pp. 2510-2519
-
-
Lavoie, B.D.1
Chaconas, G.2
-
47
-
-
0029973105
-
Anatomy of a flexer-DNA complex inside a higher-order transposition intermediate
-
Lavoie BD, Shaw GS, Millner A, Chaconas G (1996) Anatomy of a flexer-DNA complex inside a higher-order transposition intermediate. Cell 85:761-771
-
(1996)
Cell
, vol.85
, pp. 761-771
-
-
Lavoie, B.D.1
Shaw, G.S.2
Millner, A.3
Chaconas, G.4
-
48
-
-
0027510369
-
In vivo thermodynamic analysis of repression with and without looping in lac constructs. Estimates of free and local lac repressor concentrations and of physical properties of a region of supercoiled plasmid DNA in vivo
-
Law SM, Bellomy GR, Schlax PJ, Record MT Jr (1993) In vivo thermodynamic analysis of repression with and without looping in lac constructs. Estimates of free and local lac repressor concentrations and of physical properties of a region of supercoiled plasmid DNA in vivo. J Mol Biol 230:161-173
-
(1993)
J Mol Biol
, vol.230
, pp. 161-173
-
-
Law, S.M.1
Bellomy, G.R.2
Schlax, P.J.3
Record, M.T.4
-
49
-
-
0009699824
-
In vivo DNA loops in araCBAD: Size limits and helical repeat
-
Lee DH, Schleif RF (1989) In vivo DNA loops in araCBAD: size limits and helical repeat. Proc Natl Acad Sci USA 86:476-480
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 476-480
-
-
Lee, D.H.1
Schleif, R.F.2
-
50
-
-
1342332192
-
Identification of promoters of Escherichia coli and phage in transcription section plasmid pSA850
-
Lewis DE (2003) Identification of promoters of Escherichia coli and phage in transcription section plasmid pSA850. Methods Enzymol 370:618-645
-
(2003)
Methods Enzymol
, vol.370
, pp. 618-645
-
-
Lewis, D.E.1
-
51
-
-
0037169508
-
In vitro repression of the gal promoters by GalR and HU depends on the proper helical phasing of the two operators
-
Lewis DE, Adhya S (2002) In vitro repression of the gal promoters by GalR and HU depends on the proper helical phasing of the two operators. J Biol Chem 277:2498-2504
-
(2002)
J Biol Chem
, vol.277
, pp. 2498-2504
-
-
Lewis, D.E.1
Adhya, S.2
-
52
-
-
0029938053
-
Crystal structure of the lactose operon repressor and its complexes with DNA and inducer
-
Lewis M, Chang G, Horton NC, Kercher MA, Pace HC, Schumacher MA, Brennan RG, Lu P (1996) Crystal structure of the lactose operon repressor and its complexes with DNA and inducer. Science 271:1247-1254
-
(1996)
Science
, vol.271
, pp. 1247-1254
-
-
Lewis, M.1
Chang, G.2
Horton, N.C.3
Kercher, M.A.4
Pace, H.C.5
Schumacher, M.A.6
Brennan, R.G.7
Lu, P.8
-
53
-
-
0032945039
-
Role of HU and DNA supercoiling in transcription repression: Specialized nucleoprotein repression complex at gal promoters in Escherichia coli
-
Lewis DE, Geanacopoulos M, Adhya S (1999) Role of HU and DNA supercoiling in transcription repression: specialized nucleoprotein repression complex at gal promoters in Escherichia coli. Mol Microbiol 31:451-461
-
(1999)
Mol Microbiol
, vol.31
, pp. 451-461
-
-
Lewis, D.E.1
Geanacopoulos, M.2
Adhya, S.3
-
54
-
-
0141482089
-
Supercoiling and denaturation in Gal repressor/heat unstable nucleoid protein (HU)-mediated DNA looping
-
Lia G, Bensimon D, Croquette V, Allemand JF, Dunlap D, Lewis DE, Adhya S, Finzi L (2003) Supercoiling and denaturation in Gal repressor/heat unstable nucleoid protein (HU)-mediated DNA looping. Proc Natl Acad Sci USA 100:11373-11377
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 11373-11377
-
-
Lia, G.1
Bensimon, D.2
Croquette, V.3
Allemand, J.F.4
Dunlap, D.5
Lewis, D.E.6
Adhya, S.7
Finzi, L.8
-
55
-
-
47249087892
-
The antiparallel loops in gal DNA
-
Lia G, Semsey S, Lewis DE, Adhya S, Bensimon D, Dunlap D, Finzi L (2008) The antiparallel loops in gal DNA. Nucleic Acids Res 36:4204-4210
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 4204-4210
-
-
Lia, G.1
Semsey, S.2
Lewis, D.E.3
Adhya, S.4
Bensimon, D.5
Dunlap, D.6
Finzi, L.7
-
56
-
-
0025202249
-
DNA looping and unlooping by AraC protein
-
Lobell RB, Schleif RF (1990) DNA looping and unlooping by AraC protein. Science 250:528-532
-
(1990)
Science
, vol.250
, pp. 528-532
-
-
Lobell, R.B.1
Schleif, R.F.2
-
57
-
-
0021739440
-
Demonstration of two operator elements in gal: In vitro repressor binding studies
-
Majumdar A, Adhya S (1984) Demonstration of two operator elements in gal: in vitro repressor binding studies. Proc Natl Acad Sci USA 81:6100-6104
-
(1984)
Proc Natl Acad Sci USA
, vol.81
, pp. 6100-6104
-
-
Majumdar, A.1
Adhya, S.2
-
58
-
-
0023665045
-
Probing the structure of gal operator-repressor complexes. Conformation change in DNA
-
Majumdar A, Adhya S (1987) Probing the structure of gal operator-repressor complexes. Conformation change in DNA. J Biol Chem 262:13258-13262
-
(1987)
J Biol Chem
, vol.262
, pp. 13258-13262
-
-
Majumdar, A.1
Adhya, S.2
-
59
-
-
0023654073
-
Purification and properties of Gal repressor: PL-galR fusion in pKC31 plasmid vector
-
Majumdar A, Rudikoff S, Adhya S (1987) Purification and properties of Gal repressor: pL-galR fusion in pKC31 plasmid vector. J Biol Chem 262:2326-2331
-
(1987)
J Biol Chem
, vol.262
, pp. 2326-2331
-
-
Majumdar, A.1
Rudikoff, S.2
Adhya, S.3
-
60
-
-
0025216961
-
DNA looping in cellular repression of transcription of the galactose operon
-
Mandal N, Su W, Haber R, Adhya S, Echols H (1990) DNA looping in cellular repression of transcription of the galactose operon. Genes Dev 4:410-418
-
(1990)
Genes Dev
, vol.4
, pp. 410-418
-
-
Mandal, N.1
Su, W.2
Haber, R.3
Adhya, S.4
Echols, H.5
-
61
-
-
0022529619
-
Upstream operators enhance repression of the lac promoter
-
Mossing MC, Record MT Jr (1986) Upstream operators enhance repression of the lac promoter. Science 233:889-892
-
(1986)
Science
, vol.233
, pp. 889-892
-
-
Mossing, M.C.1
Record, M.T.2
-
62
-
-
0029975889
-
Repression of lac promoter as a function of distance, phase and quality of an auxiliary lac operator
-
Muller J, Oehler S, Muller-Hill B (1996) Repression of lac promoter as a function of distance, phase and quality of an auxiliary lac operator. J Mol Biol 257:21-29
-
(1996)
J Mol Biol
, vol.257
, pp. 21-29
-
-
Muller, J.1
Oehler, S.2
Muller-Hill, B.3
-
63
-
-
0032509088
-
Dimeric lac repressors exhibit phase-dependent co-operativity
-
Muller J, Barker A, Oehler S, Muller-Hill B (1998) Dimeric lac repressors exhibit phase-dependent co-operativity. J Mol Biol 284:851-857
-
(1998)
J Mol Biol
, vol.284
, pp. 851-857
-
-
Muller, J.1
Barker, A.2
Oehler, S.3
Muller-Hill, B.4
-
64
-
-
0034513957
-
Multiple restraints to the unfolding of spermidine nucleoids from Escherichia coli
-
Murphy LD, Zimmerman SB (2000) Multiple restraints to the unfolding of spermidine nucleoids from Escherichia coli. J Struct Biol 132:46-62
-
(2000)
J Struct Biol
, vol.132
, pp. 46-62
-
-
Murphy, L.D.1
Zimmerman, S.B.2
-
65
-
-
0017643161
-
Dual control for transcription of the galactose operon by cyclic AMP and its receptor protein at two interspersed promoters
-
Musso RE, Di Lauro R, Adhya S, de Crombrugghe B (1977) Dual control for transcription of the galactose operon by cyclic AMP and its receptor protein at two interspersed promoters. Cell 12:847-854
-
(1977)
Cell
, vol.12
, pp. 847-854
-
-
Musso, R.E.1
Di Lauro, R.2
Adhya, S.3
De Crombrugghe, B.4
-
66
-
-
0028558718
-
Histones, HMG, HU, IHF: Meme combat
-
Oberto J, Drlica K, Rouvière-Yaniv J (1994) Histones, HMG, HU, IHF: meme combat. Biochimie 76:901-908
-
(1994)
Biochimie
, vol.76
, pp. 901-908
-
-
Oberto, J.1
Drlica, K.2
Rouvière-Yaniv, J.3
-
67
-
-
0025343547
-
The three operators of the lac operon cooperate in repression
-
Oehler S, Eismann ER, Kramer H, Muller-Hill B (1990) The three operators of the lac operon cooperate in repression. EMBO J 9:973-979
-
(1990)
EMBO J
, vol.9
, pp. 973-979
-
-
Oehler, S.1
Eismann, E.R.2
Kramer, H.3
Muller-Hill, B.4
-
68
-
-
33745766684
-
Sigma coupling to photons: Hidden scalar in gammagamma-> pi0pi0
-
Pennington MR (2006) Sigma coupling to photons: hidden scalar in gammagamma-> pi0pi0. Phys Rev Lett 97:011601
-
(2006)
Phys Rev Lett
, vol.97
, pp. 011601
-
-
Pennington, M.R.1
-
69
-
-
0034666434
-
A functional assay in Escherichia coli to detect nonassisted interaction between galactose repressor dimers
-
Perez N, Rehault M, Amouyal M (2000) A functional assay in Escherichia coli to detect nonassisted interaction between galactose repressor dimers. Nucleic Acids Res 28:3600-3604
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 3600-3604
-
-
Perez, N.1
Rehault, M.2
Amouyal, M.3
-
70
-
-
0023682629
-
Histone-like proteins and bacterial chromosome structure
-
Pettijohn DE (1988) Histone-like proteins and bacterial chromosome structure. J Biol Chem 263:12793-12796
-
(1988)
J Biol Chem
, vol.263
, pp. 12793-12796
-
-
Pettijohn, D.E.1
-
71
-
-
0001436751
-
The nucleoid
-
Curtis R, Ingraham JL, Lin ECC, Low KB, Magasanik B, and Reznikoff WS et al. eds, 2nd edn. American Society for Microbiology, Washington, DC
-
Pettijohn DE (1996) The nucleoid. In: Curtis R, Ingraham JL, Lin ECC, Low KB, Magasanik B, and Reznikoff WS et al. (eds) Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology, 2nd edn. American Society for Microbiology, Washington, DC, pp 158-166
-
(1996)
Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology
, pp. 158-166
-
-
Pettijohn, D.E.1
-
73
-
-
0022447855
-
Gene regulation by proteins acting nearby and at a distance
-
Ptashne M (1986) Gene regulation by proteins acting nearby and at a distance. Nature 322:697-701
-
(1986)
Nature
, vol.322
, pp. 697-701
-
-
Ptashne, M.1
-
74
-
-
0022446209
-
Transcription of glnA in E. coli is stimulated by activator bound to sites far from the promoter
-
Reitzer LJ, Magasanik B (1986) Transcription of glnA in E. coli is stimulated by activator bound to sites far from the promoter. Cell 45:785-792
-
(1986)
Cell
, vol.45
, pp. 785-792
-
-
Reitzer, L.J.1
Magasanik, B.2
-
75
-
-
0018976521
-
Helical periodicity of DNA determined by enzyme digestion
-
Rhodes D, Klug A (1980) Helical periodicity of DNA determined by enzyme digestion. Nature 286:573-578
-
(1980)
Nature
, vol.286
, pp. 573-578
-
-
Rhodes, D.1
Klug, A.2
-
76
-
-
0030451819
-
Crystal structure of an IHF-DNA complex: A protein-induced DNA U-turn
-
Rice PA, Yang S, Mizuuchi K, Nash HA (1996) Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn. Cell 87:1295-1306
-
(1996)
Cell
, vol.87
, pp. 1295-1306
-
-
Rice, P.A.1
Yang, S.2
Mizuuchi, K.3
Nash, H.A.4
-
77
-
-
0017629285
-
Localization of the HU protein on the Escherichia coli nucleoid
-
Rouvière-Yaniv J (1978) Localization of the HU protein on the Escherichia coli nucleoid. Cold Spring Harb Symp Quant Biol 42(Pt 1):439-447
-
(1978)
Cold Spring Harb Symp Quant Biol
, vol.42
, pp. 439-447
-
-
Rouvière-Yaniv, J.1
-
78
-
-
0343794843
-
Characterization of a novel, low-molecular-weight DNA-binding protein from Escherichia coli
-
Rouvière-Yaniv J, Gros F (1975) Characterization of a novel, low-molecular-weight DNA-binding protein from Escherichia coli. Proc Natl Acad Sci USA 72:3428-3432
-
(1975)
Proc Natl Acad Sci USA
, vol.72
, pp. 3428-3432
-
-
Rouvière-Yaniv, J.1
Gros, F.2
-
79
-
-
7944220766
-
GalR represses galP1 by inhibiting the rate-determining open complex formation through RNA polymerase contact: A GalR negative control mutant
-
Roy S, Semsey S, Liu M, Gussin GN, Adhya S (2004) GalR represses galP1 by inhibiting the rate-determining open complex formation through RNA polymerase contact: a GalR negative control mutant. J Mol Biol 344:609-618
-
(2004)
J Mol Biol
, vol.344
, pp. 609-618
-
-
Roy, S.1
Semsey, S.2
Liu, M.3
Gussin, G.N.4
Adhya, S.5
-
80
-
-
16844362701
-
Gal repressoroperator-HU ternary complex: Pathway of repressosome formation
-
Roy S, Dimitriadis EK, Kar S, Geanacopoulos M, Lewis MS, Adhya S (2005) Gal repressoroperator-HU ternary complex: pathway of repressosome formation. Biochemistry 44:5373-5380
-
(2005)
Biochemistry
, vol.44
, pp. 5373-5380
-
-
Roy, S.1
Dimitriadis, E.K.2
Kar, S.3
Geanacopoulos, M.4
Lewis, M.S.5
Adhya, S.6
-
81
-
-
0023643854
-
Gene regulation: Why should DNA loop?
-
Schleif R (1987) Gene regulation: why should DNA loop? Nature 327:369-370
-
(1987)
Nature
, vol.327
, pp. 369-370
-
-
Schleif, R.1
-
82
-
-
0028173030
-
Crystal structure of LacI member, PurR, bound to DNA: Minor groove binding by alpha helices
-
Schumacher MA, Choi KY, Zalkin H, Brennan RG (1994) Crystal structure of LacI member, PurR, bound to DNA: minor groove binding by alpha helices. Science 266:763-770
-
(1994)
Science
, vol.266
, pp. 763-770
-
-
Schumacher, M.A.1
Choi, K.Y.2
Zalkin, H.3
Brennan, R.G.4
-
83
-
-
0037102173
-
Operator-bound GalR dimers close DNA loops by direct interaction: Tetramerization and inducer binding
-
Semsey S, Geanacopoulos M, Lewis DE, Adhya S (2002) Operator-bound GalR dimers close DNA loops by direct interaction: tetramerization and inducer binding. EMBO J 21:4349-4356
-
(2002)
EMBO J
, vol.21
, pp. 4349-4356
-
-
Semsey, S.1
Geanacopoulos, M.2
Lewis, D.E.3
Adhya, S.4
-
84
-
-
3543060486
-
DNA trajectory in the Gal repressosome
-
Semsey S, Tolstorukov MY, Virnik K, Zhurkin VB, Adhya S (2004) DNA trajectory in the Gal repressosome. Genes Dev 18:1898-1907
-
(2004)
Genes Dev
, vol.18
, pp. 1898-1907
-
-
Semsey, S.1
Tolstorukov, M.Y.2
Virnik, K.3
Zhurkin, V.B.4
Adhya, S.5
-
85
-
-
0014521181
-
The galactose operon of E. coli K-12. II. A deletion analysis of operon structure and polarity
-
Shapiro JA, Adhya SL (1969) The galactose operon of E. coli K-12. II. A deletion analysis of operon structure and polarity. Genetics 62:249-264
-
(1969)
Genetics
, vol.62
, pp. 249-264
-
-
Shapiro, J.A.1
Adhya, S.L.2
-
86
-
-
0021022977
-
Energetics of DNA twisting I. Relation between twist and cyclization probability
-
Shore D, Baldwin RL (1983) Energetics of DNA twisting I. Relation between twist and cyclization probability. J Mol Biol 170:957-981
-
(1983)
J Mol Biol
, vol.170
, pp. 957-981
-
-
Shore, D.1
Baldwin, R.L.2
-
87
-
-
0023663468
-
Transpososomes: Stable protein-DNA complexes involved in the in vitro transposition of bacteriophage Mu DNA
-
Surette MG, Buch SJ, Chaconas G (1987) Transpososomes: stable protein-DNA complexes involved in the in vitro transposition of bacteriophage Mu DNA. Cell 49:253-262
-
(1987)
Cell
, vol.49
, pp. 253-262
-
-
Surette, M.G.1
Buch, S.J.2
Chaconas, G.3
-
88
-
-
0027172958
-
Properties of DNA-binding of HU heterotypic and homotypic dimers from Escherichia coli
-
Tanaka H, Goshima N, Kohno K, Kano Y, Imamoto F (1993) Properties of DNA-binding of HU heterotypic and homotypic dimers from Escherichia coli. J Biochem 113:568-572
-
(1993)
J Biochem
, vol.113
, pp. 568-572
-
-
Tanaka, H.1
Goshima, N.2
Kohno, K.3
Kano, Y.4
Imamoto, F.5
-
89
-
-
0022382116
-
Iron (II) EDTA used to measure the helical twist along any DNA molecule
-
Tullius TD, Dombroski BA (1985) Iron (II) EDTA used to measure the helical twist along any DNA molecule. Science 230:679-681
-
(1985)
Science
, vol.230
, pp. 679-681
-
-
Tullius, T.D.1
Dombroski, B.A.2
-
90
-
-
0142226891
-
"Antiparallel" DNA loop in gal repressosome visualized by atomic force microscopy
-
Virnik K, Lyubchenko YL, Karymov MA, Dahlgren P, Tolstorukov MY, Semsey S, Zhurkin VB, Adhya S (2003) "Antiparallel" DNA loop in gal repressosome visualized by atomic force microscopy. J Mol Biol 334:53-63
-
(2003)
J Mol Biol
, vol.334
, pp. 53-63
-
-
Virnik, K.1
Lyubchenko, Y.L.2
Karymov, M.A.3
Dahlgren, P.4
Tolstorukov, M.Y.5
Semsey, S.6
Zhurkin, V.B.7
Adhya, S.8
-
91
-
-
0020118389
-
Sequence of galR gene indicates a common evolutionary origin of lac and gal repressor in Escherichia coli
-
von Wilcken-Bergmann B, Muller-Hill B (1982) Sequence of galR gene indicates a common evolutionary origin of lac and gal repressor in Escherichia coli. Proc Natl Acad Sci USA 79:2427-2431
-
(1982)
Proc Natl Acad Sci USA
, vol.79
, pp. 2427-2431
-
-
Von Wilcken-Bergmann, B.1
Muller-Hill, B.2
-
92
-
-
0018370487
-
Helical repeat of DNA in solution
-
Wang JC (1979) Helical repeat of DNA in solution. Proc Natl Acad Sci USA 76:200-203
-
(1979)
Proc Natl Acad Sci USA
, vol.76
, pp. 200-203
-
-
Wang, J.C.1
-
93
-
-
0023904316
-
Action at a distance along a DNA
-
Wang JC, Giaever GN (1988) Action at a distance along a DNA. Science 240:300-304
-
(1988)
Science
, vol.240
, pp. 300-304
-
-
Wang, J.C.1
Giaever, G.N.2
-
94
-
-
0032582494
-
Force and velocity measured for single molecules of RNA polymerase
-
Wang MD, Schnitzer MJ, Yin H, Landick R, Gelles J, Block SM (1998) Force and velocity measured for single molecules of RNA polymerase. Science 282:902-907
-
(1998)
Science
, vol.282
, pp. 902-907
-
-
Wang, M.D.1
Schnitzer, M.J.2
Yin, H.3
Landick, R.4
Gelles, J.5
Block, S.M.6
-
95
-
-
0026724966
-
A family of bacterial regulators homologous to Gal and Lac repressors
-
Weickert MJ, Adhya S (1992) A family of bacterial regulators homologous to Gal and Lac repressors. J Biol Chem 267:15869-15874
-
(1992)
J Biol Chem
, vol.267
, pp. 15869-15874
-
-
Weickert, M.J.1
Adhya, S.2
-
96
-
-
0030463126
-
Action at a distance for negative control of transcription of the glpD gene encoding sn-glycerol 3-phosphate dehydrogenase of Escherichia coli K-12
-
Yang B, Larson TJ (1996) Action at a distance for negative control of transcription of the glpD gene encoding sn-glycerol 3-phosphate dehydrogenase of Escherichia coli K-12. J Bacteriol 178:7090-7098
-
(1996)
J Bacteriol
, vol.178
, pp. 7090-7098
-
-
Yang, B.1
Larson, T.J.2
|