-
1
-
-
0024811753
-
Multipartite genetic control elements: Communication by DNA loop
-
Adhya, S. (1989) Multipartite genetic control elements: communication by DNA loop, Annu. Rev. Genet. 23, 227-250.
-
(1989)
Annu. Rev. Genet.
, vol.23
, pp. 227-250
-
-
Adhya, S.1
-
3
-
-
0029153579
-
Repression and activation of transcription by Gal and Lac repressors: Involvement of alpha subunit of RNA polymerase
-
Choy, H. E., Park, S. W., Aki, T., Parrack, P., Fujita, N., Ishihama, A., and Adhya, S. (1995) Repression and activation of transcription by Gal and Lac repressors: involvement of alpha subunit of RNA polymerase, EMBO J. 14, 4523-4529.
-
(1995)
EMBO J.
, vol.14
, pp. 4523-4529
-
-
Choy, H.E.1
Park, S.W.2
Aki, T.3
Parrack, P.4
Fujita, N.5
Ishihama, A.6
Adhya, S.7
-
4
-
-
0020621169
-
A control element within a structural gene: The gal operon of Escherichia coli
-
Irani, M., Orosz, L., and Adhya, S. (1983) A control element within a structural gene: the gal operon of Escherichia coli, Cell 32, 783-788.
-
(1983)
Cell
, vol.32
, pp. 783-788
-
-
Irani, M.1
Orosz, L.2
Adhya, S.3
-
5
-
-
0030072556
-
Histone-like protein HU as a specific transcriptional regulator: Co-factor role in repression of gal transcription by GAL repressor
-
Aki, T., Choy, H. E., and Adhya, S. (1996) Histone-like protein HU as a specific transcriptional regulator: co-factor role in repression of gal transcription by GAL repressor, Genes Cells 1, 179-188.
-
(1996)
Genes Cells
, vol.1
, pp. 179-188
-
-
Aki, T.1
Choy, H.E.2
Adhya, S.3
-
6
-
-
0032459035
-
Transcription regulation by repressosome and by RNA polymerase contact
-
Adhya, S., Geanacopoulos, M., Lewis, D. E., Roy, S., and Aki, T. (1998) Transcription regulation by repressosome and by RNA polymerase contact, Cold Spring Harbor Symp. Quant. Biol. 63, 1-9.
-
(1998)
Cold Spring Harbor Symp. Quant. Biol.
, vol.63
, pp. 1-9
-
-
Adhya, S.1
Geanacopoulos, M.2
Lewis, D.E.3
Roy, S.4
Aki, T.5
-
7
-
-
0020118389
-
Sequence of galR gene indicates a common evolutionary origin of lac and gal repressor in Escherichia coli
-
von Wilcken-Bergmann, B., and Muller-Hill, B. (1982) Sequence of galR gene indicates a common evolutionary origin of lac and gal repressor in Escherichia coli, Proc. Natl. Acad. Sci. U.S.A. 79, 2427-2431.
-
(1982)
Proc. Natl. Acad. Sci. U.S.A.
, vol.79
, pp. 2427-2431
-
-
Von Wilcken-Bergmann, B.1
Muller-Hill, B.2
-
8
-
-
0028043678
-
Prokaryotic HU and eukaryotic HMG1: A kinked relationship
-
Bianchi, M. E. (1994) Prokaryotic HU and eukaryotic HMG1: a kinked relationship, Mol. Microbiol. 14, 1-5.
-
(1994)
Mol. Microbiol.
, vol.14
, pp. 1-5
-
-
Bianchi, M.E.1
-
9
-
-
0028136642
-
DNA-binding parameters of the HU protein of Escherichia coli to cruciform DNA
-
Bonnefoy, E., Takahashi, M., and Rouvière-Yaniv, J. (1994) DNA-binding parameters of the HU protein of Escherichia coli to cruciform DNA, J. Mol. Biol. 242, 1116-1129.
-
(1994)
J. Mol. Biol.
, vol.242
, pp. 1116-1129
-
-
Bonnefoy, E.1
Takahashi, M.2
Rouvière-Yaniv, J.3
-
10
-
-
0028901705
-
HU protein of Escherichia coli binds specifically to DNA that contains single-strand breaks or gaps
-
Castaing, B., Zelwer, C., Laval, J., and Boiteux, S. (1995) HU protein of Escherichia coli binds specifically to DNA that contains single-strand breaks or gaps, J. Biol. Chem. 270, 10291-10296.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 10291-10296
-
-
Castaing, B.1
Zelwer, C.2
Laval, J.3
Boiteux, S.4
-
11
-
-
0033057518
-
Supercoiling-dependent site-specific binding of HU to naked Mu DNA
-
Kobryn, K., Lavoie, B., and Chaconas, G. (1999) Supercoiling-dependent site-specific binding of HU to naked Mu DNA, J. Mol. Biol. 289, 777-784.
-
(1999)
J. Mol. Biol.
, vol.289
, pp. 777-784
-
-
Kobryn, K.1
Lavoie, B.2
Chaconas, G.3
-
12
-
-
0030581143
-
On the connection between inherent DNA flexure and preferred binding of hydroxymethyluracil-containing DNA by the type II DNA-binding protein TF1
-
Grove, A., Galeone, A., Mayol, L., and Geiduschek, E. P. (1996) On the connection between inherent DNA flexure and preferred binding of hydroxymethyluracil-containing DNA by the type II DNA-binding protein TF1, J. Mol. Biol. 260, 196-206.
-
(1996)
J. Mol. Biol.
, vol.260
, pp. 196-206
-
-
Grove, A.1
Galeone, A.2
Mayol, L.3
Geiduschek, E.P.4
-
13
-
-
0030928287
-
Repressor induced site-specific binding of HU for transcriptional regulation
-
Aki, T., and Adhya, S. (1997) Repressor induced site-specific binding of HU for transcriptional regulation, EMBO J. 16, 3666-3674.
-
(1997)
EMBO J.
, vol.16
, pp. 3666-3674
-
-
Aki, T.1
Adhya, S.2
-
14
-
-
0035449843
-
Recruitment of HU by piggyback: A special role of GalR in repressosome assembly
-
Kar, S., and Adhya, S. (2001) Recruitment of HU by piggyback: a special role of GalR in repressosome assembly, Genes Dev. 15, 2273-2281.
-
(2001)
Genes Dev.
, vol.15
, pp. 2273-2281
-
-
Kar, S.1
Adhya, S.2
-
15
-
-
0023654073
-
Purification and properties of Gal repressor:pL-galR fusion in pKC31 plasmid vector
-
Majumdar, A., Rudikoff, S., and Adhya, S. (1987) Purification and properties of Gal repressor:pL-galR fusion in pKC31 plasmid vector, J. Biol Chem. 262, 2326-2331.
-
(1987)
J. Biol Chem.
, vol.262
, pp. 2326-2331
-
-
Majumdar, A.1
Rudikoff, S.2
Adhya, S.3
-
16
-
-
0002374931
-
Analysis of protein-nucleic acid and protein-protein interactions using multi-wavelength scans from the XL-A analytical ultracentrifuge
-
Shuster, T. M., and Laue, T. M., Eds. Birkhauser, Boston
-
Lewis, M. S., Shrager, R. I., and Kim, S.-J. (1994) Analysis of protein-nucleic acid and protein-protein interactions using multi-wavelength scans from the XL-A analytical ultracentrifuge, in Modern Analytical Ultracentrifugation (Shuster, T. M., and Laue, T. M., Eds.) pp 94-115, Birkhauser, Boston.
-
(1994)
Modern Analytical Ultracentrifugation
, pp. 94-115
-
-
Lewis, M.S.1
Shrager, R.I.2
Kim, S.-J.3
-
17
-
-
0036271270
-
Half-of-the-sites reactivity of F235C lambda-repressor: Implications for the structure of the whole repressor
-
Bandyopadhyay, S., Deb, S., Bose, S., and Roy, S. (2002) Half-of-the-sites reactivity of F235C lambda-repressor: implications for the structure of the whole repressor, Protein Eng. 15, 393-401.
-
(2002)
Protein Eng.
, vol.15
, pp. 393-401
-
-
Bandyopadhyay, S.1
Deb, S.2
Bose, S.3
Roy, S.4
-
18
-
-
0025273827
-
Interaction of the Escherichia coli Gal repressor protein with its DNA operators in vitro
-
Brenowitz, M., Jamison, E., Majumdar, A., and Adhya, S. (1990) Interaction of the Escherichia coli Gal repressor protein with its DNA operators in vitro, Biochemistry 29, 3374-3383.
-
(1990)
Biochemistry
, vol.29
, pp. 3374-3383
-
-
Brenowitz, M.1
Jamison, E.2
Majumdar, A.3
Adhya, S.4
-
20
-
-
0024580995
-
Effects of single-base bulges on intercalator binding to small RNA and DNA hairpins and a ribosomal RNA fragment
-
White, S. A., and Draper, D. E. (1989) Effects of single-base bulges on intercalator binding to small RNA and DNA hairpins and a ribosomal RNA fragment, Biochemistry 28, 1892-1897.
-
(1989)
Biochemistry
, vol.28
, pp. 1892-1897
-
-
White, S.A.1
Draper, D.E.2
-
21
-
-
0030451819
-
Crystal structure of an IHF-DNA complex: A protein-induced DNA U-turn
-
Rice, P. A., Yang, S., Mizuuchi, K., and Nash, H. A. (1996) Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn, Cell 87, 1295-1306.
-
(1996)
Cell
, vol.87
, pp. 1295-1306
-
-
Rice, P.A.1
Yang, S.2
Mizuuchi, K.3
Nash, H.A.4
-
22
-
-
0035039812
-
Gal repressosome contains an antiparallel DNA loop
-
Geanacopoulos, M., Vasmatzis, G., Zhurkin, V. B., and Adhya, S. (2001) Gal repressosome contains an antiparallel DNA loop, Nat. Struct. Biol. 8, 432-436.
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 432-436
-
-
Geanacopoulos, M.1
Vasmatzis, G.2
Zhurkin, V.B.3
Adhya, S.4
-
23
-
-
0037102173
-
Operator-bound GalR dimers close DNA loops by direct interaction: Tetramerization and inducer binding
-
Semsey, S., Geanacopoulos, M., Lewis, D. E., and Adhya, S. (2002) Operator-bound GalR dimers close DNA loops by direct interaction: tetramerization and inducer binding, EMBO J. 21, 4349-4356.
-
(2002)
EMBO J.
, vol.21
, pp. 4349-4356
-
-
Semsey, S.1
Geanacopoulos, M.2
Lewis, D.E.3
Adhya, S.4
-
24
-
-
0002480960
-
The E. coli HU and IHF proteins: Accessory factors for complex protein-DNA assemblies
-
Lin, E. C. C., and Lynch, A. S., Eds. R. G. Landes Co., Georgetown, TX
-
Nash, H. A. (1996) The E. coli HU and IHF proteins: accessory factors for complex protein-DNA assemblies, in Regulation of Gene Expression in E. coli (Lin, E. C. C., and Lynch, A. S., Eds.) pp 149-179, R. G. Landes Co., Georgetown, TX.
-
(1996)
Regulation of Gene Expression in E. Coli
, pp. 149-179
-
-
Nash, H.A.1
-
25
-
-
0025148348
-
Nucleoprotein structures initiating DNA replication, transcription, and site-specific recombination
-
Echols, H. (1990) Nucleoprotein structures initiating DNA replication, transcription, and site-specific recombination, J. Biol. Chem. 265, 14697-14700.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 14697-14700
-
-
Echols, H.1
-
26
-
-
0026792836
-
Role of integration host factor in stimulating transcription from the sigma 54-dependent nifH promoter
-
Santero, E., Hoover, T. R., North, A. K., Berger, D. K., Porter, S. C., and Kustu, S. (1992) Role of integration host factor in stimulating transcription from the sigma 54-dependent nifH promoter, J. Mol. Biol. 227, 602-620.
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 602-620
-
-
Santero, E.1
Hoover, T.R.2
North, A.K.3
Berger, D.K.4
Porter, S.C.5
Kustu, S.6
-
27
-
-
0033962961
-
Two roles for integration host factor at an enhancer-dependent nifA promoter
-
Wassem, R., De Souza, E. M., Yates, M. G., Pedrosa, F. D., and Buck, M. (2000) Two roles for integration host factor at an enhancer-dependent nifA promoter, Mol. Microbiol. 35, 756-764.
-
(2000)
Mol. Microbiol.
, vol.35
, pp. 756-764
-
-
Wassem, R.1
De Souza, E.M.2
Yates, M.G.3
Pedrosa, F.D.4
Buck, M.5
-
28
-
-
0035281548
-
HMG1 and 2, and related "architectural" DNA-binding proteins
-
Thomas, J. O., and Travers, A. A. (2001) HMG1 and 2, and related "architectural" DNA-binding proteins, Trends Biochem. Sci. 26, 167-174.
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 167-174
-
-
Thomas, J.O.1
Travers, A.A.2
-
29
-
-
18444412561
-
Insights into specific DNA recognition during the assembly of a viral genome packaging machine
-
De Beer, T., Fang, J., Ortega, M., Yang, Q., Maes, L., Duffy, C., Berton, N., Sippy, J., Overduin, M., Feisss, M., and Catalano, C. E. (2002) Insights into specific DNA recognition during the assembly of a viral genome packaging machine, Mol. Cell 9, 981-991.
-
(2002)
Mol. Cell
, vol.9
, pp. 981-991
-
-
De Beer, T.1
Fang, J.2
Ortega, M.3
Yang, Q.4
Maes, L.5
Duffy, C.6
Berton, N.7
Sippy, J.8
Overduin, M.9
Feisss, M.10
Catalano, C.E.11
-
30
-
-
0033563076
-
GalR mutants defective in repressosome formation
-
Geanacopoulos, M., Vasmatzis, G., Lewis, D. E. A., Roy, S., Lee, B. K., and Adhya, S. (1999) GalR mutants defective in repressosome formation, Genes Dev. 13, 1251-1262.
-
(1999)
Genes Dev.
, vol.13
, pp. 1251-1262
-
-
Geanacopoulos, M.1
Vasmatzis, G.2
Lewis, D.E.A.3
Roy, S.4
Lee, B.K.5
Adhya, S.6
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