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Volumn 66, Issue 1, 2011, Pages 66-79

From hormones to secondary metabolism: The emergence of metabolic gene clusters in plants

Author keywords

antibiotics; gene clusters; hormones; maize; oat; rice

Indexed keywords

ADAPTIVE EVOLUTION; COMMON FEATURES; EUKARYOTIC GENES; FILAMENTOUS FUNGI; GENE CLUSTERS; HORIZONTAL GENE TRANSFER; INTRIGUING QUESTIONS; MAIZE; METABOLIC GENES; METABOLIC PATHWAYS; MICROBIAL GENOMES; OAT; RICE; SECONDARY METABOLISM; SECONDARY METABOLITES;

EID: 79953237139     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/j.1365-313X.2011.04503.x     Document Type: Article
Times cited : (120)

References (101)
  • 1
    • 0036042698 scopus 로고    scopus 로고
    • Genomic analysis of the terpenoid synthase (AtTPS) gene family of Arabidopsis thaliana
    • DOI 10.1007/s00438-002-0709-y
    • Aubourg, S., Lechnarny, A., and, Bohlmann, J., (2002) Genomic analysis of the terpenoid synthase (AtTPS) gene family of Arabidopsis thaliana. Mol. Genet. Genomics, 267, 730-745. (Pubitemid 35013680)
    • (2002) Molecular Genetics and Genomics , vol.267 , Issue.6 , pp. 730-745
    • Aubourg, S.1    Lecharny, A.2    Bohlmann, J.3
  • 2
    • 0037306139 scopus 로고    scopus 로고
    • Caenorhabditis elegans operons: Form and function
    • Blumenthal, T., and, Gleason, K.S., (2003) Caenorhabditis elegans operons: form and function. Nat. Rev. Genet. 4, 110-118.
    • (2003) Nat. Rev. Genet. , vol.4 , pp. 110-118
    • Blumenthal, T.1    Gleason, K.S.2
  • 3
    • 4143090400 scopus 로고    scopus 로고
    • LaeA, a regulator of secondary metabolism in Aspergillus spp
    • DOI 10.1128/EC.3.2.527-535.2004
    • Bok, J.W., and, Keller, N.P., (2004) LaeA, a regulator of secondary metabolism in Aspergillus spp. Eukaryot. Cell, 3, 527-535. (Pubitemid 38497990)
    • (2004) Eukaryotic Cell , vol.3 , Issue.2 , pp. 527-535
    • Bok, J.W.1    Keller, N.P.2
  • 4
    • 67650321573 scopus 로고    scopus 로고
    • Chromatin-level regulation of biosynthetic gene clusters
    • Bok, J.W., Chiang, Y.-M., Szewczyk, E., et al. (2009) Chromatin-level regulation of biosynthetic gene clusters. Nat. Chem. Biol. 5, 462-464.
    • (2009) Nat. Chem. Biol. , vol.5 , pp. 462-464
    • Bok, J.W.1    Chiang, Y.-M.2    Szewczyk, E.3
  • 5
    • 77953139551 scopus 로고    scopus 로고
    • Rapid expansion and functional divergence of subtelomeric gene families in yeasts
    • Brown, C.A., Murray, A.W., and, Verstrepen, K.J., (2010) Rapid expansion and functional divergence of subtelomeric gene families in yeasts. Curr. Biol. 20, 895-903.
    • (2010) Curr. Biol. , vol.20 , pp. 895-903
    • Brown, C.A.1    Murray, A.W.2    Verstrepen, K.J.3
  • 6
  • 7
    • 0036008773 scopus 로고    scopus 로고
    • The genetics and molecular genetics of terpene and sterol origami
    • DOI 10.1016/S1369-5266(02)00241-8
    • Chappell, J., (2002) The genetics and molecular genetics of terpene and sterol origami. Curr. Opin. Plant Biol. 5, 151-157. (Pubitemid 34190383)
    • (2002) Current Opinion in Plant Biology , vol.5 , Issue.2 , pp. 151-157
    • Chappell, J.1
  • 8
    • 73949102298 scopus 로고    scopus 로고
    • Epigenome manipulation as a pathway to new natural product scaffolds and their congeners
    • Cichewicz, R.H., (2010) Epigenome manipulation as a pathway to new natural product scaffolds and their congeners. Nat. Prod. Rep. 27, 11-22.
    • (2010) Nat. Prod. Rep. , vol.27 , pp. 11-22
    • Cichewicz, R.H.1
  • 9
    • 0032169271 scopus 로고    scopus 로고
    • Conservation of gene order: A fingerprint of proteins that physically interact
    • DOI 10.1016/S0968-0004(98)01274-2, PII S0968000498012742
    • Dandekar, T., Snel, B., Huynen, M., and, Bork, P., (1998) Conservation of gene order: a fingerprint of proteins that physically interact. Trends Biochem. Sci. 23, 324-328. (Pubitemid 28461862)
    • (1998) Trends in Biochemical Sciences , vol.23 , Issue.9 , pp. 324-328
    • Dandekar, T.1    Snel, B.2    Huynen, M.3    Bork, P.4
  • 11
    • 24044440773 scopus 로고    scopus 로고
    • Aflatoxin biosynthesis gene clusters and flanking regions
    • DOI 10.1111/j.1365-2672.2005.02637.x
    • Ehrlich, K.C., Yu, J., and, Cotty, P.J., (2005) Aflatoxin biosynthesis gene clusters and flanking regions. J. Appl. Microbiol. 99, 518-527. (Pubitemid 41215829)
    • (2005) Journal of Applied Microbiology , vol.99 , Issue.3 , pp. 518-527
    • Ehrlich, K.C.1    Yu, J.2    Cotty, P.J.3
  • 12
    • 0032170425 scopus 로고    scopus 로고
    • The deoxyxylulose phosphate pathway of terpenoid biosynthesis in plants and microorganisms
    • Eisenreich, W., Schwarz, M., Cartayrade, A., Arigoni, D., Zenk, M.H., and, Bacher, A., (1998) The deoxyxylulose phosphate pathway of terpenoid biosynthesis in plants and microorganisms. Chem. Biol. 5, R221-R233. (Pubitemid 28436724)
    • (1998) Chemistry and Biology , vol.5 , Issue.9
    • Eisenreich, W.1    Schwarz, M.2    Cartayrade, A.3    Arigoni, D.4    Zenk, M.H.5    Bacher, A.6
  • 13
    • 18844434690 scopus 로고    scopus 로고
    • The origin and evolution of operons: The piecewise building of the proteobacterial histidine operon
    • DOI 10.1007/s00239-004-0198-1
    • Fani, R., Brilli, M., and, Liò, P., (2005) The origin and evolution of operons: the piecewise building of the proteobacterial histidine operon. J. Mol. Evol. 60, 378-390. (Pubitemid 40685129)
    • (2005) Journal of Molecular Evolution , vol.60 , Issue.3 , pp. 378-390
    • Fani, R.1    Brilli, M.2    Lio, P.3
  • 14
    • 42549088178 scopus 로고    scopus 로고
    • Metabolic diversification - Independent assembly of operon-like gene clusters in different plants
    • DOI 10.1126/science.1154990
    • Field, B., and, Osbourn, A.E., (2008) Metabolic diversification- independent assembly of operon-like gene clusters in different plants. Science, 320, 543-547. (Pubitemid 351590669)
    • (2008) Science , vol.320 , Issue.5875 , pp. 543-547
    • Field, B.1    Osbourn, A.E.2
  • 16
    • 70349748499 scopus 로고    scopus 로고
    • Antibiotics from microbes: Converging to kill
    • Fischbach, M.A., (2009) Antibiotics from microbes: converging to kill. Curr. Opin. Microbiol. 12, 520-527.
    • (2009) Curr. Opin. Microbiol. , vol.12 , pp. 520-527
    • Fischbach, M.A.1
  • 17
    • 70349979682 scopus 로고    scopus 로고
    • Origin and evolution of operons and metabolic pathways
    • Fondi, M., Emiliani, G., and, Fani, R., (2009) Origin and evolution of operons and metabolic pathways. Res. Microbiol. 160, 502-512.
    • (2009) Res. Microbiol. , vol.160 , pp. 502-512
    • Fondi, M.1    Emiliani, G.2    Fani, R.3
  • 19
    • 0028848836 scopus 로고
    • Expression of a cytochrome P450 gene family in maize
    • Frey, M., Kliem, R., Saedler, H., and, Gierl, G., (1995) Expression of a cytochrome P450 gene family in maize. Mol. Gen. Genet. 246, 100-109.
    • (1995) Mol. Gen. Genet. , vol.246 , pp. 100-109
    • Frey, M.1    Kliem, R.2    Saedler, H.3    Gierl, G.4
  • 21
    • 0037310715 scopus 로고    scopus 로고
    • A 2-oxoglutarate-dependent dioxygenase is integrated in DIMBOA-biosynthesis
    • DOI 10.1016/S0031-9422(02)00556-3, PII S0031942202005563
    • Frey, M., Huber, K., Park, W.J., Sicker, D., Lindberg, P., Meeley, R.B., Simmons, C.R., Yalpini, N., and, Gierl, A., (2003) A 2-oxoglutarate-dependent dioxygenase is integrated in DIMBOA biosynthesis. Phytochemistry, 62, 371-376. (Pubitemid 36168939)
    • (2003) Phytochemistry , vol.62 , Issue.3 , pp. 371-376
    • Frey, M.1    Huber, K.2    Park, W.J.3    Sicker, D.4    Lindberg, P.5    Meeley, R.B.6    Simmons, C.R.7    Yalpani, N.8    Gierl, A.9
  • 22
    • 70350715080 scopus 로고    scopus 로고
    • Benzoxazinoid biosynthesis, a model for evolution of secondary metabolic pathways in plants
    • Frey, M., Schullehner, K., Dick, R., Fiesselmann, A., and, Gierl, A., (2009) Benzoxazinoid biosynthesis, a model for evolution of secondary metabolic pathways in plants. Phytochemistry, 70, 1645-1651.
    • (2009) Phytochemistry , vol.70 , pp. 1645-1651
    • Frey, M.1    Schullehner, K.2    Dick, R.3    Fiesselmann, A.4    Gierl, A.5
  • 23
    • 35648954086 scopus 로고    scopus 로고
    • The third dimension of gene regulation: Organization of dynamic chromatin loopscape by SATB1
    • DOI 10.1016/j.gde.2007.08.003, PII S0959437X07001542, Differentiation and Gene Regulation
    • Galande, S., Purbey, P.K., Notani, D., and, Kumar, P.P., (2007) The third dimension of gene regulation: organization of dynamic chromatin loopscape by SATB1. Curr. Opin. Genet. Dev. 17, 408-414. (Pubitemid 350019562)
    • (2007) Current Opinion in Genetics and Development , vol.17 , Issue.5 , pp. 408-414
    • Galande, S.1    Purbey, P.K.2    Notani, D.3    Kumar, P.P.4
  • 24
    • 64249172680 scopus 로고    scopus 로고
    • Chapter 3. Discovering natural products from myxobacteria with emphasis on rare producer strains in combination with improved analytical methods
    • In (Hopwood, D.A., ed.) 459. New York: Academic Press, pp.
    • Garcia, R.O., Krug, D., and, Muller, R., (2009) Chapter 3. Discovering natural products from myxobacteria with emphasis on rare producer strains in combination with improved analytical methods. In Methods in Enzymology (, Hopwood, D.A., ed.) 459. New York: Academic Press, pp. 59-91.
    • (2009) Methods in Enzymology , pp. 59-91
    • Garcia, R.O.1    Krug, D.2    Muller, R.3
  • 25
    • 0034844992 scopus 로고    scopus 로고
    • Evolution of benzoxazinone biosynthesis and indole production in maize
    • DOI 10.1007/s004250100594
    • Gierl, A., and, Frey, M., (2001) Evolution of benzoxazinone biosynthesis and indole production in maize. Planta, 213, 493-498. (Pubitemid 32792465)
    • (2001) Planta , vol.213 , Issue.4 , pp. 493-498
    • Gierl, A.1    Frey, M.2
  • 26
    • 33745183354 scopus 로고    scopus 로고
    • A plant locus essential for phylloquinone (vitamin K1) biosynthesis originated from a fusion of four eubacterial genes
    • Gross, J., Cho, W.K., Lezhneva, L., Falk, J., Krupinska, K., Shinozaki, K., Seki, M., Herrmann, R.G., and, Meurer, J., (2006) A plant locus essential for phylloquinone (vitamin K1) biosynthesis originated from a fusion of four eubacterial genes. J. Biol. Chem. 281, 17189-17196.
    • (2006) J. Biol. Chem. , vol.281 , pp. 17189-17196
    • Gross, J.1    Cho, W.K.2    Lezhneva, L.3    Falk, J.4    Krupinska, K.5    Shinozaki, K.6    Seki, M.7    Herrmann, R.G.8    Meurer, J.9
  • 28
    • 0023157482 scopus 로고
    • The complex Arom locus of Aspergillus nidulans. Evidence for multiple gene fusions and convergent evolution
    • DOI 10.1007/BF00384611
    • Hawkins, A.R., (1987) The complex Arom locus of Aspergillus nidulans. Evidence for multiple gene fusions and convergent evolution. Curr. Genet. 11, 491-498. (Pubitemid 17040055)
    • (1987) Current Genetics , vol.11 , Issue.6-7 , pp. 491-498
    • Hawkins, A.R.1
  • 29
    • 21744442742 scopus 로고    scopus 로고
    • Evolutionary conservation of bacterial operons: Does transcriptional connectivity matter?
    • Hazkani-Covo, E., and, Graur, D., (2005) Evolutionary conservation of bacterial operons: does transcriptional connectivity matter? Genetica, 124, 145-166.
    • (2005) Genetica , vol.124 , pp. 145-166
    • Hazkani-Covo, E.1    Graur, D.2
  • 31
    • 33947694781 scopus 로고    scopus 로고
    • Natural products of filamentous fungi: Enzymes, genes, and their regulation
    • DOI 10.1039/b603084j
    • Hoffmeister, D., and, Keller, N.P., (2007) Natural products of filamentous fungi: enzymes, genes, and their regulation. Nat. Prod. Rep. 24, 393-416. (Pubitemid 46496563)
    • (2007) Natural Product Reports , vol.24 , Issue.2 , pp. 393-416
    • Hoffmeister, D.1    Keller, N.P.2
  • 32
    • 79957523276 scopus 로고    scopus 로고
    • Complex enzymes in microbial natural product biosynthesis, part A: Overview articles and peptides
    • In (Hopwood, D.A., ed.) 459. New York: Academic Press, pp.
    • Hopwood, D.A., (2009a) Complex enzymes in microbial natural product biosynthesis, part A: overview articles and peptides. In Methods in Enzymology (, Hopwood, D.A., ed.) 459. New York: Academic Press, pp. xix-xxi.
    • (2009) Methods in Enzymology
    • Hopwood, D.A.1
  • 33
    • 67649234111 scopus 로고    scopus 로고
    • Complex enzymes in microbial natural product biosynthesis, part B: Polyketides, aminocoumarins and carbohydrates
    • In (Hopwood, D.A., ed.) 459. New York: Academic Press, pp.
    • Hopwood, D.A., (2009b) Complex enzymes in microbial natural product biosynthesis, part B: polyketides, aminocoumarins and carbohydrates. In Methods in Enzymology (, Hopwood, D.A., ed.) 459. New York: Academic Press, pp. xvii-xix.
    • (2009) Methods in Enzymology
    • Hopwood, D.A.1
  • 35
    • 1842427830 scopus 로고    scopus 로고
    • The evolutionary dynamics of eukaryotic gene order
    • DOI 10.1038/nrg1319
    • Hurst, L.D., Pal, C., and, Lercher, M.J., (2004) The evolutionary dynamics of eukaryotic gene order. Nat. Rev. Genet. 5, 299-310. (Pubitemid 38435625)
    • (2004) Nature Reviews Genetics , vol.5 , Issue.4 , pp. 299-310
    • Hurst, L.D.1    Pal, C.2    Lercher, M.J.3
  • 36
    • 54249116230 scopus 로고
    • Genetic regulatory mechanisms in the synthesis of proteins
    • Jacob, F., and, Monod, J., (1961) Genetic regulatory mechanisms in the synthesis of proteins. J. Mol. Biol. 3, 318-356.
    • (1961) J. Mol. Biol. , vol.3 , pp. 318-356
    • Jacob, F.1    Monod, J.2
  • 37
    • 57349140010 scopus 로고    scopus 로고
    • Transcriptional regulation constrains the organization of genes on eukaryotic chromosomes
    • Janga, S.C., Collado-Vides, J., and, Babu, M., (2008) Transcriptional regulation constrains the organization of genes on eukaryotic chromosomes. Proc. Natl Acad. Sci. USA, 105, 15761-15766.
    • (2008) Proc. Natl Acad. Sci. USA , vol.105 , pp. 15761-15766
    • Janga, S.C.1    Collado-Vides, J.2    Babu, M.3
  • 39
    • 44649170477 scopus 로고    scopus 로고
    • Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi
    • Khaldi, N., Collemare, J., Lebrun, M.H., and, Wolfe, K.H., (2008) Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi. Genome Biol. 9, R18.
    • (2008) Genome Biol. , vol.9
    • Khaldi, N.1    Collemare, J.2    Lebrun, M.H.3    Wolfe, K.H.4
  • 40
    • 56949097722 scopus 로고    scopus 로고
    • Evolution of genome architecture
    • Koonin, E.V., (2009) Evolution of genome architecture. Int. J. Biochem. Cell Biol. 41, 298-306.
    • (2009) Int. J. Biochem. Cell Biol. , vol.41 , pp. 298-306
    • Koonin, E.V.1
  • 41
    • 66249146869 scopus 로고    scopus 로고
    • Stochasticity in protein levels drives colinearity of gene order in metabolic operons of Escherichia coli
    • Kovács, K., Hurst, L.D., and, Papp, B., (2009) Stochasticity in protein levels drives colinearity of gene order in metabolic operons of Escherichia coli. PLoS Biol. 7, e1000115.
    • (2009) PLoS Biol. , vol.7
    • Kovács, K.1    Hurst, L.D.2    Papp, B.3
  • 43
    • 0032793852 scopus 로고    scopus 로고
    • Selfish operons: The evolutionary impact of gene clustering in prokaryotes and eukaryotes
    • Lawrence, J., (1999) Selfish operons: the evolutionary impact of gene clustering in prokaryotes and eukaryotes. Curr. Opin. Genet. Dev. 9, 642-648.
    • (1999) Curr. Opin. Genet. Dev. , vol.9 , pp. 642-648
    • Lawrence, J.1
  • 44
    • 0029847554 scopus 로고    scopus 로고
    • Selfish operons: Horizontal transfer may drive the evolution of gene clusters
    • Lawrence, J.G., and, Roth, J.R., (1996) Selfish operons: horizontal transfer may drive the evolution of gene clusters. Genetics, 143, 1843-1860. (Pubitemid 26286959)
    • (1996) Genetics , vol.143 , Issue.4 , pp. 1843-1860
    • Lawrence, J.G.1    Roth, J.R.2
  • 45
    • 0038104857 scopus 로고    scopus 로고
    • Genomic gene clustering analysis of pathways in eukaryotes
    • DOI 10.1101/gr.737703
    • Lee, J.M., and, Sonnhammer, E.L., (2003) Genomic gene clustering analysis of pathways in eukaryotes. Genome Res. 13, 875-882. (Pubitemid 36621748)
    • (2003) Genome Research , vol.13 , Issue.5 , pp. 875-882
    • Lee, J.M.1    Sonnhammer, E.L.L.2
  • 46
    • 0033513375 scopus 로고    scopus 로고
    • The 1-deoxy-D-xylulose-5-phosphate pathway of isoprenoid biosynthesis in plants
    • Lichtenthaler, H.K., (1999) The 1-deoxy-d-xylulose 5-phosphate pathway of isoprenoid biosynthesis in plants. Annu. Rev. Plant Physiol. Plant Mol. Biol. 50, 47-65. (Pubitemid 129493120)
    • (1999) Annual Review of Plant Biology , vol.50 , pp. 47-65
    • Lichtenthaler, H.K.1
  • 47
    • 0027751336 scopus 로고
    • The chromosomal DNA of Streptomyces lividans 66 is linear
    • Lin, Y.-S., Kieser, H.M., Hopwood, D.A., and, Chen, C.W., (1993) The chromosomal DNA of Streptomyces lividans 66 is linear. Mol. Microbiol. 10, 923-933. (Pubitemid 24040870)
    • (1993) Molecular Microbiology , vol.10 , Issue.5 , pp. 923-933
    • Lin, Y.-S.1    Kieser, H.M.2    Hopwood, D.A.3    Chen, C.W.4
  • 48
    • 0021238139 scopus 로고
    • Molecular cloning of the whole biosynthetic pathway of a Streptomyces antibiotic and its expression in a heterologous host
    • Malpartida, F., and, Hopwood, D.A., (1984) Molecular cloning of the whole biosynthetic pathway of a Streptomyces antibiotic and its expression in a heterologous host. Nature, 309, 462-464. (Pubitemid 14102453)
    • (1984) Nature , vol.309 , Issue.5967 , pp. 462-464
    • Malpartida, F.1    Hopwood, D.A.2
  • 49
    • 33751011629 scopus 로고    scopus 로고
    • In vivo DNase I sensitivity of the Streptomyces coelicolor chromosome correlates with gene expression: Implications for bacterial chromosome structure
    • DOI 10.1093/nar/gkl649
    • McArthur, M., and, Bibb, M., (2006) In vivo DNase I sensitivity of the Streptomyces coelicolor chromosome correlates with gene expression: implications for bacterial chromosome structure. Nucleic Acids Res. 34, 5395-5401. (Pubitemid 44742429)
    • (2006) Nucleic Acids Research , vol.34 , Issue.19 , pp. 5395-5401
    • McArthur, M.1    Bibb, M.2
  • 51
    • 0038644393 scopus 로고    scopus 로고
    • The large linear plasmid pSLA2-L of Streptomyces rochei has an unusually condensed gene organization for secondary metabolism
    • DOI 10.1046/j.1365-2958.2003.03523.x
    • Mochizuki, S., Hiratsu, K., Suwa, M., Ishii, T., Sugino, F., Yamada, K., and, Kinashi, H,. (2003) The large linear plasmid pSLA2-L of Streptomyces rochei has an unusually condensed gene organization for secondary metabolism. Mol. Microbiol. 48, 1501-1510. (Pubitemid 36751057)
    • (2003) Molecular Microbiology , vol.48 , Issue.6 , pp. 1501-1510
    • Mochizuki, S.1    Hiratsu, K.2    Suwa, M.3    Ishii, T.4    Sugino, F.5    Yamada, K.6    Kinashi, H.7
  • 52
    • 70349678827 scopus 로고    scopus 로고
    • A serine carboxypeptidase-like acyltransferase is required for synthesis of antimicrobial compounds and disease resistance in oats
    • Mugford, S.T., Qi, X., Bakht, S., et al. (2009) A serine carboxypeptidase-like acyltransferase is required for synthesis of antimicrobial compounds and disease resistance in oats. Plant Cell, 21, 2473-2484.
    • (2009) Plant Cell , vol.21 , pp. 2473-2484
    • Mugford, S.T.1    Qi, X.2    Bakht, S.3
  • 54
    • 0014150722 scopus 로고
    • Modification of linkage intensity by natural selection
    • Nei, M.M., (1967) Modification of linkage intensity by natural selection. Genetics, 57, 625-641.
    • (1967) Genetics , vol.57 , pp. 625-641
    • Nei, M.M.1
  • 55
    • 0038806337 scopus 로고    scopus 로고
    • Let's stick together
    • DOI 10.1038/sj.hdy.6800287
    • Nei, M., (2003) Let's stick together. Heredity, 90, 411-412. (Pubitemid 36720235)
    • (2003) Heredity , vol.90 , Issue.6 , pp. 411-412
    • Nei, M.1
  • 56
    • 85032069874 scopus 로고
    • Hydroxamic acids (4-Hydroxy-1,4-benzoxazin-3-ones), defense chemicals in the Gramineae
    • Niemeyer, H.M., (1988) Hydroxamic acids (4-Hydroxy-1,4-benzoxazin-3-ones) , defense chemicals in the Gramineae. Phytochemistry, 27, 3349-3358.
    • (1988) Phytochemistry , vol.27 , pp. 3349-3358
    • Niemeyer, H.M.1
  • 57
    • 0036236987 scopus 로고    scopus 로고
    • Molecular characterization and chromosomal localization of cytochrome P450 genes involved in the biosynthesis of cyclic hydroxamic acids in hexaploid wheat
    • DOI 10.1007/s00438-002-0653-x
    • Nomura, T., Ishihara, A., Imaishi, H., Endo, T., Ohkawa, H., and, Iwamura, H., (2002) Molecular characterization and chromosomal localization of cytochrome P450 genes involved in the biosynthesis of cyclic hydroxamic acids in hexaploid wheat. Mol. Genet. Genomics, 267, 210-217. (Pubitemid 34437996)
    • (2002) Molecular Genetics and Genomics , vol.267 , Issue.2 , pp. 210-217
    • Nomura, T.1    Ishihara, A.2    Imaishi, H.3    Endo, T.4    Ohkawa, H.5    Iwamura, H.6
  • 58
    • 0141565107 scopus 로고    scopus 로고
    • Rearrangement of the genes for the biosynthesis of benzoxazinones in the evolution of Triticeae species
    • DOI 10.1007/s00425-003-1040-5
    • Nomura, T., Ishihara, A., Imaishi, H., Ohkawa, H., Endo, T., and, Iwamura, H., (2003) Rearrangement of the genes for the biosynthesis of benzoxazinones in the evolution of Triticeae species. Planta, 217, 776-782. (Pubitemid 37181468)
    • (2003) Planta , vol.217 , Issue.5 , pp. 776-782
    • Nomura, T.1    Ishihara, A.2    Imaishi, H.3    Ohkawa, H.4    Endo, T.R.5    Iwamura, H.6
  • 59
    • 77955935755 scopus 로고    scopus 로고
    • Gene duplications and the time thereafter - Examples from plant secondary metabolism
    • Ober, D., (2010) Gene duplications and the time thereafter-examples from plant secondary metabolism. Plant Biol. 12, 570-577.
    • (2010) Plant Biol. , vol.12 , pp. 570-577
    • Ober, D.1
  • 60
    • 70350366897 scopus 로고    scopus 로고
    • OsTGAP1, a bZIP transcription factor, co-ordinately regulates the inductive production of diterpenoid phytoalexins in rice
    • Okada, A., Okada, K., Miyamoto, K., Koga, J., Shibuya, N., Nojiri, H., and, Yamane, H., (2009) OsTGAP1, a bZIP transcription factor, co-ordinately regulates the inductive production of diterpenoid phytoalexins in rice. J. Biol. Chem. 284, 26510-26518.
    • (2009) J. Biol. Chem. , vol.284 , pp. 26510-26518
    • Okada, A.1    Okada, K.2    Miyamoto, K.3    Koga, J.4    Shibuya, N.5    Nojiri, H.6    Yamane, H.7
  • 61
    • 77956767424 scopus 로고    scopus 로고
    • Secondary metabolic gene clusters: Evolutionary toolkits for chemical innovation
    • Osbourn, A., (2010a) Secondary metabolic gene clusters: evolutionary toolkits for chemical innovation. Trends Genet. 26, 449-457.
    • (2010) Trends Genet. , vol.26 , pp. 449-457
    • Osbourn, A.1
  • 62
    • 77957737508 scopus 로고    scopus 로고
    • Gene clusters for secondary metabolic pathways: An emerging theme in plant biology
    • Osbourn, A., (2010b) Gene clusters for secondary metabolic pathways: an emerging theme in plant biology. Plant Physiol. 154, 531-535.
    • (2010) Plant Physiol. , vol.154 , pp. 531-535
    • Osbourn, A.1
  • 64
    • 55549084895 scopus 로고    scopus 로고
    • Reconfiguration of genomic anchors upon transcriptional activation of the human major histocompatibility complex
    • Ottaviani, D., Lever, E., Mitter, R., et al. (2008) Reconfiguration of genomic anchors upon transcriptional activation of the human major histocompatibility complex. Genome Res. 18, 1778-1786.
    • (2008) Genome Res. , vol.18 , pp. 1778-1786
    • Ottaviani, D.1    Lever, E.2    Mitter, R.3
  • 65
    • 17144459133 scopus 로고    scopus 로고
    • Evidence against the selfish operon theory
    • DOI 10.1016/j.tig.2004.04.001, PII S0168952504000939
    • Pál, C., and, Hurst, L.D., (2004) Evidence against the selfish operon theory. Trends Genet. 20, 232-234. (Pubitemid 38625680)
    • (2004) Trends in Genetics , vol.20 , Issue.6 , pp. 232-234
    • Pal, C.1    Hurst, L.D.2
  • 67
    • 35648941643 scopus 로고    scopus 로고
    • Origin and distribution of epipolythiodioxopiperazine (ETP) gene clusters in filamentous ascomycetes
    • Patron, N., Waller, R., Cozijnsen, A., Straney, D., Gardiner, D., Nierman, W., and, Howlett, B., (2007) Origin and distribution of epipolythiodioxopiperazine (ETP) gene clusters in filamentous ascomycetes. BMC Evol. Biol. 7, 174.
    • (2007) BMC Evol. Biol. , vol.7 , pp. 174
    • Patron, N.1    Waller, R.2    Cozijnsen, A.3    Straney, D.4    Gardiner, D.5    Nierman, W.6    Howlett, B.7
  • 69
    • 33749512596 scopus 로고    scopus 로고
    • Uncovering the complex metabolic network underlying diterpenoid phytoalexin biosynthesis in rice and other cereal crop plants
    • DOI 10.1016/j.phytochem.2006.08.009, PII S0031942206004778
    • Peters, R.J., (2006) Uncovering the complex metabolic network underlying diterpenoid phytoalexin biosynthesis in rice and other cereal crop plants. Phytochemistry, 67, 2307-2317. (Pubitemid 44527936)
    • (2006) Phytochemistry , vol.67 , Issue.21 , pp. 2307-2317
    • Peters, R.J.1
  • 70
    • 22444441190 scopus 로고    scopus 로고
    • Operon formation is driven by co-regulation and not by horizontal gene transfer
    • DOI 10.1101/gr.3368805
    • Price, M.N., Huang, K.H., Arkin, A.P., and, Alm, E.J., (2005) Operon formation is driven by co-regulation and not by horizontal gene transfer. Genome Res. 15, 809-819. (Pubitemid 41007056)
    • (2005) Genome Research , vol.15 , Issue.6 , pp. 809-819
    • Price, M.N.1    Huang, K.H.2    Arkin, A.P.3    Alm, E.J.4
  • 72
    • 70450198122 scopus 로고    scopus 로고
    • Evidence that a secondary metabolic biosynthetic gene cluster has grown by gene relocation during evolution of the filamentous fungus Fusarium
    • Proctor, R.H., McCormick, S.P., Alexander, N.J., and, Desjardins, A.E., (2009) Evidence that a secondary metabolic biosynthetic gene cluster has grown by gene relocation during evolution of the filamentous fungus Fusarium. Mol. Microbiol. 74, 1128-1142.
    • (2009) Mol. Microbiol. , vol.74 , pp. 1128-1142
    • Proctor, R.H.1    McCormick, S.P.2    Alexander, N.J.3    Desjardins, A.E.4
  • 75
    • 77954241960 scopus 로고    scopus 로고
    • High throughput screening of mutants of oat that are defective in triterpene synthesis
    • Qin, B., Eagles, J., Mellon, F.A., Mylona, P., Peña-Rodriguez, L., and, Osbourn, A.E., (2010) High throughput screening of mutants of oat that are defective in triterpene synthesis. Phytochemistry, 71, 1245-1252.
    • (2010) Phytochemistry , vol.71 , pp. 1245-1252
    • Qin, B.1    Eagles, J.2    Mellon, F.A.3    Mylona, P.4    Peña-Rodriguez, L.5    Osbourn, A.E.6
  • 77
    • 58449118337 scopus 로고    scopus 로고
    • The organization of the bacterial genome
    • Rocha, E.P., (2008) The organization of the bacterial genome. Annu. Rev. Genet. 42, 211-233.
    • (2008) Annu. Rev. Genet. , vol.42 , pp. 211-233
    • Rocha, E.P.1
  • 78
    • 0033213706 scopus 로고    scopus 로고
    • The discovery of a mevalonate-independent pathway for isoprenoid biosynthesis in bacteria, algae and higher plants
    • DOI 10.1039/a709175c
    • Rohmer, M., (1999) The discovery of a mevalonate-independent pathway for isoprenoid biosynthesis in bacteria, algae and higher plants. Nat. Prod. Rep. 16, 565-574. (Pubitemid 29501611)
    • (1999) Natural Product Reports , vol.16 , Issue.5 , pp. 565-574
    • Rohmer, M.1
  • 83
    • 0034014079 scopus 로고    scopus 로고
    • Role of natural benzoxazinones in the survival strategy of plants
    • Sicker, D., Frey, M., Schulz, M., and, Gierl, A., (2000) Role of natural benzoxazinones in the survival strategy of plants. Int. Rev. Cytol. 198, 319-346. (Pubitemid 30248868)
    • (2000) International Review of Cytology , vol.198 , pp. 319-346
    • Sicker, D.1    Frey, M.2    Schulz, M.3    Gierl, A.4
  • 84
    • 41549141861 scopus 로고    scopus 로고
    • Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: A phylogenetic study
    • Slot, J.C., and, Hibbett, D.S., (2007) Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study. PLoS ONE, 2, e1097.
    • (2007) PLoS ONE , vol.2
    • Slot, J.C.1    Hibbett, D.S.2
  • 85
    • 77953399342 scopus 로고    scopus 로고
    • Multiple GAL pathway gene clusters evolved independently and by different mechanisms in fungi
    • Slot, J.C., and, Rokas, A., (2010) Multiple GAL pathway gene clusters evolved independently and by different mechanisms in fungi. Proc. Natl Acad. Sci. USA, 107, 10136-10141.
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 10136-10141
    • Slot, J.C.1    Rokas, A.2
  • 86
    • 0027166660 scopus 로고
    • Operons in C. elegans: Polycistronic mRNA precursors are processed by trans-splicing of SL2 to downstream coding regions
    • DOI 10.1016/0092-8674(93)90139-H
    • Spieth, J., Brooke, G., Kuersten, S., Lea, K., and, Blumenthal, T., (1993) Operons in C. elegans: polycistronic mRNA precursors are processed by trans-splicing of SL2 to downstream coding regions. Cell, 73, 521-532. (Pubitemid 23143351)
    • (1993) Cell , vol.73 , Issue.3 , pp. 521-532
    • Spieth, J.1    Brooke, G.2    Kuersten, S.3    Lea, K.4    Blumenthal, T.5
  • 87
    • 25844496592 scopus 로고    scopus 로고
    • The role of chromatin structure in regulating the expression of clustered genes
    • DOI 10.1038/nrg1688
    • Sproul, D., Gilbert, N., and, Bickmore, W.A., (2005) The role of chromatin structure in regulating the expression of clustered genes. Nat. Rev. Genet. 6, 775-781. (Pubitemid 41400835)
    • (2005) Nature Reviews Genetics , vol.6 , Issue.10 , pp. 775-781
    • Sproul, D.1    Gilbert, N.2    Bickmore, W.A.3
  • 88
    • 8544264562 scopus 로고    scopus 로고
    • Efficient attenuation of stochasticity in gene expression through post-transcriptional control
    • DOI 10.1016/j.jmb.2004.09.073, PII S0022283604012306
    • Swain, P.S., (2004) Efficient attenuation of stochasticity in gene expression through post-transcriptional control. J. Mol. Biol. 344, 965-976. (Pubitemid 39491243)
    • (2004) Journal of Molecular Biology , vol.344 , Issue.4 , pp. 965-976
    • Swain, P.S.1
  • 89
    • 72049093206 scopus 로고    scopus 로고
    • CYP76M7 is an ent-cassadiene C11α-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice
    • Swaminathan, S., Morrone, D., Wang, Q., Fulton, B., and, Peters, R.J., (2009) CYP76M7 is an ent-cassadiene C11α-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice. Plant Cell, 21, 3315-3325.
    • (2009) Plant Cell , vol.21 , pp. 3315-3325
    • Swaminathan, S.1    Morrone, D.2    Wang, Q.3    Fulton, B.4    Peters, R.J.5
  • 90
    • 45849132076 scopus 로고    scopus 로고
    • Recent advances regarding diterpene cyclase genes in higher plants and fungi
    • DOI 10.1271/bbb.80044
    • Toyomasu, T., (2008) Recent advances regarding diterpene cyclase genes in higher plants and fungi. Biosci. Biotechnol. Biochem. 72, 1168-1175. (Pubitemid 351877005)
    • (2008) Bioscience, Biotechnology and Biochemistry , vol.72 , Issue.5 , pp. 1168-1175
    • Toyomasu, T.1
  • 92
    • 77957733291 scopus 로고    scopus 로고
    • Secondary metabolism
    • In (Borkovich, K., Ebbole, D. and Momany, M., eds). Washington, DC: American Society of Microbiology, pp.
    • Turgeon, B.G., and, Bushley, K.E., (2010) Secondary metabolism. In Cellular and Molecular Biology of Filamentous Fungi (, Borkovich, K., Ebbole, D., and, Momany, M., eds). Washington, DC: American Society of Microbiology, pp. 376-395.
    • (2010) Cellular and Molecular Biology of Filamentous Fungi , pp. 376-395
    • Turgeon, B.G.1    Bushley, K.E.2
  • 93
    • 0035544422 scopus 로고    scopus 로고
    • Two glucosyltransferases are involved in detoxification of benzoxazinoids in maize
    • DOI 10.1046/j.1365-313x.2001.01161.x
    • Von Rad, U., Hüttl, R., Lottspeich, F., Gierl, A., and, Frey, M., (2001) Two glucosyltransferases are involved in detoxification of benzoxazinoids in maize. Plant J. 28, 633-642. (Pubitemid 34114970)
    • (2001) Plant Journal , vol.28 , Issue.6 , pp. 633-642
    • Von Rad, U.1    Huttl, R.2    Lottspeich, F.3    Gierl, A.4    Frey, M.5
  • 94
    • 0033762670 scopus 로고    scopus 로고
    • Horizontal gene transfer and the evolution of secondary metabolite gene clusters in fungi: An hypothesis
    • Walton, J., (2000) Horizontal gene transfer and the evolution of secondary metabolite gene clusters in fungi: an hypothesis. Fungal Genet. Biol. 30, 167-171.
    • (2000) Fungal Genet. Biol. , vol.30 , pp. 167-171
    • Walton, J.1
  • 95
    • 75649093345 scopus 로고    scopus 로고
    • Cell-type specific chromatin decondensation of a metabolic gene cluster in oats
    • Wegel, E., Koumproglou, R., Shaw, P., and, Osbourn, A., (2009) Cell-type specific chromatin decondensation of a metabolic gene cluster in oats. Plant Cell, 21, 3926-3936.
    • (2009) Plant Cell , vol.21 , pp. 3926-3936
    • Wegel, E.1    Koumproglou, R.2    Shaw, P.3    Osbourn, A.4
  • 96
    • 4444335616 scopus 로고    scopus 로고
    • Identification of syn-pimara-7,15-diene synthase reveals functional clustering of terpene synthases involved in rice phytoalexin/allelochemical biosynthesis
    • DOI 10.1104/pp.104.045971
    • Wilderman, P.R., Xu, M., Jin, Y., Coates, R.M., and, Peters, R.J., (2004) Identification of syn-imara-7,15-diene synthase reveals functional clustering of terpene synthases involved in rice phytoalexin/allelochemical biosynthesis. Plant Physiol. 135, 2098-2105. (Pubitemid 39182789)
    • (2004) Plant Physiology , vol.135 , Issue.4 , pp. 2098-2105
    • Wilderman, P.R.1    Xu, M.2    Jin, Y.3    Coates, R.M.4    Peters, R.J.5
  • 97
    • 22844450779 scopus 로고    scopus 로고
    • Birth of a metabolic gene cluster in yeast by adaptive gene relocation
    • DOI 10.1038/ng1584
    • Wong, S., and, Wolfe, K.H., (2005) Birth of a metabolic gene cluster in yeast by adaptive gene relocation. Nat. Genet. 37, 777-782. (Pubitemid 41754898)
    • (2005) Nature Genetics , vol.37 , Issue.7 , pp. 777-782
    • Wong, S.1    Wolfe, K.H.2
  • 98
    • 52149090746 scopus 로고    scopus 로고
    • MicroRNAs in the Hox network: An apparent link to posterior prevalence
    • Yekta, S., Tabin, C.J., and, Bartel, D.P., (2008) MicroRNAs in the Hox network: an apparent link to posterior prevalence. Nat. Rev. Genet. 9, 789-796.
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 789-796
    • Yekta, S.1    Tabin, C.J.2    Bartel, D.P.3
  • 100
    • 0036676469 scopus 로고    scopus 로고
    • Computational identification of operons in microbial genomes
    • DOI 10.1101/gr.200601
    • Zheng, Y., Szustakowski, J.D., Fortnow, L., Roberts, R.J., and, Kasif, S., (2002) Computational identification of operons in microbial genomes. Genome Res. 12, 1221-1230. (Pubitemid 41264424)
    • (2002) Genome Research , vol.12 , Issue.8 , pp. 1221-1230
    • Zheng, Y.1    Szustakowski, J.D.2    Fortnow, L.3    Roberts, R.J.4    Kasif, S.5
  • 101
    • 0028033820 scopus 로고
    • Operons as a common form of chromosomal organization in C. elegans
    • DOI 10.1038/372270a0
    • Zorio, D.A.R., Cheng, N.S.N., Blumenthal, T., and, Spieth, J., (1994) Operons as a common form of chromosomal organization in C. elegans. Nature, 372, 270-272. (Pubitemid 24352449)
    • (1994) Nature , vol.372 , Issue.6503 , pp. 270-272
    • Zorio, D.A.R.1    Cheng, N.N.2    Blumenthal, T.3    Spieth, J.4


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