메뉴 건너뛰기




Volumn 21, Issue 12, 2009, Pages 3926-3936

Cell type-specific chromatin decondensation of a metabolic gene cluster in oats

Author keywords

[No Author keywords available]

Indexed keywords

AVENA; AVENA STRIGOSA; MAMMALIA; MUS;

EID: 75649093345     PISSN: 10404651     EISSN: 1532298X     Source Type: Journal    
DOI: 10.1105/tpc.109.072124     Document Type: Article
Times cited : (63)

References (46)
  • 1
    • 43049105813 scopus 로고    scopus 로고
    • Together we stand: Genes cluster to coordinate regulation
    • Amoutzias, G., and Van de Peer, Y. (2008). Together we stand: Genes cluster to coordinate regulation. Dev. Cell 14: 640-642.
    • (2008) Dev. Cell , vol.14 , pp. 640-642
    • Amoutzias, G.1    van de Peer, Y.2
  • 2
    • 33847386173 scopus 로고    scopus 로고
    • Chromosome organization: New facts, new models
    • Branco, M.R., and Pombo, A. (2007). Chromosome organization: New facts, new models. Trends Cell Biol. 17: 127-134.
    • (2007) Trends Cell Biol , vol.17 , pp. 127-134
    • Branco, M.R.1    Pombo, A.2
  • 3
    • 2442695407 scopus 로고    scopus 로고
    • Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription
    • Chambeyron, S., and Bickmore, W.A. (2004). Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription. Genes Dev. 18: 1119-1130.
    • (2004) Genes Dev , vol.18 , pp. 1119-1130
    • Chambeyron, S.1    Bickmore, W.A.2
  • 4
    • 19744379789 scopus 로고    scopus 로고
    • Nuclear re-organisation of the Hoxb complex during mouse embryonic development
    • Chambeyron, S., Da Silva, N.R., Lawson, K.A., and Bickmore, W.A. (2005). Nuclear re-organisation of the Hoxb complex during mouse embryonic development. Development 132: 2215-2223.
    • (2005) Development , vol.132 , pp. 2215-2223
    • Chambeyron, S.1    da Silva, N.R.2    Lawson, K.A.3    Bickmore, W.A.4
  • 5
    • 0036008773 scopus 로고    scopus 로고
    • The genetics and molecular genetics of terpene and sterol origami
    • Chappell, J. (2002). The genetics and molecular genetics of terpene and sterol origami. Curr. Opin. Plant Biol. 5: 151-157.
    • (2002) Curr. Opin. Plant Biol , vol.5 , pp. 151-157
    • Chappell, J.1
  • 6
    • 0034641909 scopus 로고    scopus 로고
    • Messenger RNA targeting of rice seed storage proteins to specific ER subdomains
    • Choi, S.B., Wang, C., Muench, D.G., Ozawa, K., Franceschi, V.R., Wu, Y., and Okita, T.W. (2000). Messenger RNA targeting of rice seed storage proteins to specific ER subdomains. Nature 407: 765-767.
    • (2000) Nature , vol.407 , pp. 765-767
    • Choi, S.B.1    Wang, C.2    Muench, D.G.3    Ozawa, K.4    Franceschi, V.R.5    Wu, Y.6    Okita, T.W.7
  • 7
    • 16544384639 scopus 로고    scopus 로고
    • Targeting of proteins to endoplasmic reticulum-derived compartments in plants. The importance of RNA localization
    • Crofts, A.J., Washida, H., Okita, T.W., Ogawa, M., Kumamaru, T., and Satoh, H. (2004). Targeting of proteins to endoplasmic reticulum-derived compartments in plants. The importance of RNA localization. Plant Physiol. 136: 3414-3419.
    • (2004) Plant Physiol , vol.136 , pp. 3414-3419
    • Crofts, A.J.1    Washida, H.2    Okita, T.W.3    Ogawa, M.4    Kumamaru, T.5    Satoh, H.6
  • 8
    • 0020061312 scopus 로고
    • Visualization of active 75 S RNA genes in the Balbiani rings of Chironomus tentans
    • Daneholt, B., Andersson, K., Bjorkroth, B., and Lamb, M.M. (1982). Visualization of active 75 S RNA genes in the Balbiani rings of Chironomus tentans. Eur. J. Cell Biol. 26: 325-332.
    • (1982) Eur. J. Cell Biol , vol.26 , pp. 325-332
    • Daneholt, B.1    Andersson, K.2    Bjorkroth, B.3    Lamb, M.M.4
  • 9
    • 35649020707 scopus 로고    scopus 로고
    • The perichromatin region: A functional compartment in the nucleus that determines large-scale chromatin folding
    • Fakan, S., and van Driel, R. (2007). The perichromatin region: A functional compartment in the nucleus that determines large-scale chromatin folding. Semin. Cell Dev. Biol. 18: 676-681.
    • (2007) Semin. Cell Dev. Biol , vol.18 , pp. 676-681
    • Fakan, S.1    van Driel, R.2
  • 10
    • 42549088178 scopus 로고    scopus 로고
    • Metabolic diversification - Independent assembly of operon-like gene clusters in different plants
    • Field, B., and Osbourn, A.E. (2008). Metabolic diversification - Independent assembly of operon-like gene clusters in different plants. Science 320: 543-547.
    • (2008) Science , vol.320 , pp. 543-547
    • Field, B.1    Osbourn, A.E.2
  • 12
    • 36549055666 scopus 로고    scopus 로고
    • The evolution of resistance genes in multi-protein plant resistance systems
    • Friedman, A.R., and Baker, B.J. (2007). The evolution of resistance genes in multi-protein plant resistance systems. Curr. Opin. Genet. Dev. 17: 493-499.
    • (2007) Curr. Opin. Genet. Dev , vol.17 , pp. 493-499
    • Friedman, A.R.1    Baker, B.J.2
  • 13
    • 0034844992 scopus 로고    scopus 로고
    • Evolution of benzoxazinone biosynthesis and indole production in maize
    • Gierl, A., and Frey, M. (2001). Evolution of benzoxazinone biosynthesis and indole production in maize. Planta 213: 493-498.
    • (2001) Planta , vol.213 , pp. 493-498
    • Gierl, A.1    Frey, M.2
  • 14
    • 0034880712 scopus 로고    scopus 로고
    • Single ribosomal transcription units are linear, compacted Christmas trees in plant nucleoli
    • Gonzalez-Melendi, P., Wells, B., Beven, A.F., and Shaw, P.J. (2001). Single ribosomal transcription units are linear, compacted Christmas trees in plant nucleoli. Plant J. 27: 223-233.
    • (2001) Plant J , vol.27 , pp. 223-233
    • Gonzalez-Melendi, P.1    Wells, B.2    Beven, A.F.3    Shaw, P.J.4
  • 15
    • 0036439462 scopus 로고    scopus 로고
    • Remembrance of things past: Chromatin remodeling in plant development
    • Goodrich, J., and Tweedie, S. (2002). Remembrance of things past: Chromatin remodeling in plant development. Annu. Rev. Cell Dev. Biol. 18: 707-746.
    • (2002) Annu. Rev. Cell Dev. Biol , vol.18 , pp. 707-746
    • Goodrich, J.1    Tweedie, S.2
  • 16
    • 61649120707 scopus 로고    scopus 로고
    • Trafficking and sequestration of anthocyanins
    • Grotewold, E., and Davies, K. (2008). Trafficking and sequestration of anthocyanins. Nat. Prod. Comms. 3: 1251-1258.
    • (2008) Nat. Prod. Comms , vol.3 , pp. 1251-1258
    • Grotewold, E.1    Davies, K.2
  • 20
    • 34248593510 scopus 로고    scopus 로고
    • Nuclear reorganisation and chromatin decondensation are conserved, but distinct, mechanisms linked to Hox gene activation
    • Morey, C., Da Silva, N.R., Perry, P., and Bickmore, W.A. (2007). Nuclear reorganisation and chromatin decondensation are conserved, but distinct, mechanisms linked to Hox gene activation. Development 134: 909-919.
    • (2007) Development , vol.134 , pp. 909-919
    • Morey, C.1    da Silva, N.R.2    Perry, P.3    Bickmore, W.A.4
  • 21
    • 0032883207 scopus 로고    scopus 로고
    • Fungal resistance to plant antibiotics as a mechanism of pathogenesis
    • Morrissey, J.P., and Osbourn, A.E. (1999). Fungal resistance to plant antibiotics as a mechanism of pathogenesis. Microbiol. Mol. Biol. Rev. 63: 708-724.
    • (1999) Microbiol. Mol. Biol. Rev , vol.63 , pp. 708-724
    • Morrissey, J.P.1    Osbourn, A.E.2
  • 22
    • 70349678827 scopus 로고    scopus 로고
    • A serine carboxypeptidase-like acyltransferase is required for synthesis of antimicrobial compounds and disease resistance in oats
    • Mugford, S.T., et al. (2009). A serine carboxypeptidase-like acyltransferase is required for synthesis of antimicrobial compounds and disease resistance in oats. Plant Cell 21: 2473-2484.
    • (2009) Plant Cell , vol.21 , pp. 2473-2484
    • Mugford, S.T.1
  • 23
    • 6344252526 scopus 로고    scopus 로고
    • Generic features of tertiary chromatin structure as detected in natural chromosomes
    • Müller, W.G., Rieder, D., Kreth, G., Cremer, C., Trajanoski, Z., and McNally, J.G. (2004). Generic features of tertiary chromatin structure as detected in natural chromosomes. Mol. Cell. Biol. 24: 9359-9370.
    • (2004) Mol. Cell. Biol , vol.24 , pp. 9359-9370
    • Müller, W.G.1    Rieder, D.2    Kreth, G.3    Cremer, C.4    Trajanoski, Z.5    McNally, J.G.6
  • 25
    • 58849148672 scopus 로고    scopus 로고
    • Dual biosynthetic pathways to phytosterol via cycloartenol and lanosterol in Arabidopsis
    • Ohyama, K., Suzuki, M., Kikuchi, J., Saito, K., and Muranaka, T. (2009). Dual biosynthetic pathways to phytosterol via cycloartenol and lanosterol in Arabidopsis. Proc. Natl. Acad. Sci. USA 106: 725-730.
    • (2009) Proc. Natl. Acad. Sci. Usa , vol.106 , pp. 725-730
    • Ohyama, K.1    Suzuki, M.2    Kikuchi, J.3    Saito, K.4    Muranaka, T.5
  • 26
    • 0036883471 scopus 로고    scopus 로고
    • mRNA localization in plants: Targeting to the cell's cortical region and beyond
    • Okita, T.W., and Choi, S.B. (2002). mRNA localization in plants: Targeting to the cell's cortical region and beyond. Curr. Opin. Plant Biol. 5: 553-559.
    • (2002) Curr. Opin. Plant Biol , vol.5 , pp. 553-559
    • Okita, T.W.1    Choi, S.B.2
  • 27
    • 0015964401 scopus 로고
    • Spheroid chromatin units (v bodies)
    • Olins, A.L., and Olins, D.E. (1974). Spheroid chromatin units (v bodies). Science 183: 330-332.
    • (1974) Science , vol.183 , pp. 330-332
    • Olins, A.L.1    Olins, D.E.2
  • 29
    • 0016687530 scopus 로고
    • Electron microscopic and biochemical evidence that chromatin structure is a repeating unit
    • Oudet, P., Gross-Bellard, M., and Chambon, P. (1975). Electron microscopic and biochemical evidence that chromatin structure is a repeating unit. Cell 4: 281-300.
    • (1975) Cell , vol.4 , pp. 281-300
    • Oudet, P.1    Gross-Bellard, M.2    Chambon, P.3
  • 31
    • 2542634233 scopus 로고    scopus 로고
    • A gene cluster for secondary metabolism in oat: Implications for the evolution of metabolic diversity in plants
    • Qi, X., Bakht, S., Leggett, M., Maxwell, C., Melton, R., and Osbourn, A. (2004). A gene cluster for secondary metabolism in oat: Implications for the evolution of metabolic diversity in plants. Proc. Natl. Acad. Sci. USA 101: 8233-8238.
    • (2004) Proc. Natl. Acad. Sci. Usa , vol.101 , pp. 8233-8238
    • Qi, X.1    Bakht, S.2    Leggett, M.3    Maxwell, C.4    Melton, R.5    Osbourn, A.6
  • 33
    • 33646242052 scopus 로고    scopus 로고
    • EM measurements define the dimensions of the "30-nm" chromatin fiber: Evidence for a compact, interdigitated structure
    • Robinson, P.J., Fairall, L., Huynh, V.A., and Rhodes, D. (2006). EM measurements define the dimensions of the "30-nm" chromatin fiber: Evidence for a compact, interdigitated structure. Proc. Natl. Acad. Sci. USA 103: 6506-6511.
    • (2006) Proc. Natl. Acad. Sci. Usa , vol.103 , pp. 6506-6511
    • Robinson, P.J.1    Fairall, L.2    Huynh, V.A.3    Rhodes, D.4
  • 34
    • 36348964360 scopus 로고    scopus 로고
    • Identification of a biosynthetic gene cluster in rice for momilactones
    • Shimura, K., et al. (2007). Identification of a biosynthetic gene cluster in rice for momilactones. J. Biol. Chem. 282: 34013-34018.
    • (2007) J. Biol. Chem , vol.282 , pp. 34013-34018
    • Shimura, K.1
  • 35
    • 25844496592 scopus 로고    scopus 로고
    • The role of chromatin structure in regulating the expression of clustered genes
    • Sproul, D., Gilbert, N., and Bickmore, W.A. (2005). The role of chromatin structure in regulating the expression of clustered genes. Nat. Rev. Genet. 6: 775-781.
    • (2005) Nat. Rev. Genet , vol.6 , pp. 775-781
    • Sproul, D.1    Gilbert, N.2    Bickmore, W.A.3
  • 36
    • 72049093206 scopus 로고    scopus 로고
    • CYP76M7 is an ent-cassadiene C11a-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice
    • doi/
    • Swaminathan, S., Morrone, D., Wang, Q., Fulton, B.D., Peters, R.J. (2009). CYP76M7 is an ent-cassadiene C11a-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice. Plant Cell 21: 3315-3325.doi/.
    • (2009) Plant Cell , vol.21 , pp. 3315-3325
    • Swaminathan, S.1    Morrone, D.2    Wang, Q.3    Fulton, B.D.4    Peters, R.J.5
  • 38
    • 0033612538 scopus 로고    scopus 로고
    • Large-scale chromatin unfolding and remodeling induced by VP16 acidic activation domain
    • Tumbar, T., Sudlow, G., and Belmont, A.S. (1999). Large-scale chromatin unfolding and remodeling induced by VP16 acidic activation domain. J. Cell Biol. 145: 1341-1354.
    • (1999) J. Cell Biol , vol.145 , pp. 1341-1354
    • Tumbar, T.1    Sudlow, G.2    Belmont, A.S.3
  • 40
    • 12444273783 scopus 로고    scopus 로고
    • Asymmetric localization of seed storage protein RNAs to distinct subdomains of the endoplasmic reticulum in developing maize endosperm cells
    • Washida, H., Sugino, A., Messing, J., Esen, A., and Okita, T.W. (2004). Asymmetric localization of seed storage protein RNAs to distinct subdomains of the endoplasmic reticulum in developing maize endosperm cells. Plant Cell Physiol. 45: 1830-1837.
    • (2004) Plant Cell Physiol , vol.45 , pp. 1830-1837
    • Washida, H.1    Sugino, A.2    Messing, J.3    Esen, A.4    Okita, T.W.5
  • 41
    • 68049140098 scopus 로고
    • The structure of DNA. Cold Spring Harb
    • Watson, J.D., and Crick, F.H.C. (1953). The structure of DNA. Cold Spring Harb. Symp. Quant. Biol. 18: 123-131.
    • (1953) Symp. Quant. Biol , vol.18 , pp. 123-131
    • Watson, J.D.1    Crick, F.H.C.2
  • 42
    • 16844367621 scopus 로고    scopus 로고
    • Large-scale chromatin decondensation induced in a developmentally activated transgene locus
    • Wegel, E., Vallejos, R.H., Christou, P., Stoger, E., and Shaw, P. (2005). Large-scale chromatin decondensation induced in a developmentally activated transgene locus. J. Cell Sci. 118: 1021-1031.
    • (2005) J. Cell Sci , vol.118 , pp. 1021-1031
    • Wegel, E.1    Vallejos, R.H.2    Christou, P.3    Stoger, E.4    Shaw, P.5
  • 43
    • 4444335616 scopus 로고    scopus 로고
    • Identification of syn-pimara-7,15-diene synthase reveals functional clustering of terpene synthases involved in rice phytoalexin/ allelochemical biosynthesis
    • Wilderman, P.R., Xu, M., Jin, Y., Coates, R.M., and Peters, R.J. (2004). Identification of syn-pimara-7,15-diene synthase reveals functional clustering of terpene synthases involved in rice phytoalexin/ allelochemical biosynthesis. Plant Physiol. 135: 2098-2105.
    • (2004) Plant Physiol , vol.135 , pp. 2098-2105
    • Wilderman, P.R.1    Xu, M.2    Jin, Y.3    Coates, R.M.4    Peters, R.J.5
  • 44
    • 0036061468 scopus 로고    scopus 로고
    • Subchromosomal positioning of the epidermal differentiation complex (EDC) in keratinocyte and lymphoblast interphase nuclei
    • Williams, R.R., Broad, S., Sheer, D., and Ragoussis, J. (2002). Subchromosomal positioning of the epidermal differentiation complex (EDC) in keratinocyte and lymphoblast interphase nuclei. Exp. Cell Res. 272: 163-175.
    • (2002) Exp. Cell Res , vol.272 , pp. 163-175
    • Williams, R.R.1    Broad, S.2    Sheer, D.3    Ragoussis, J.4
  • 45
    • 22844450779 scopus 로고    scopus 로고
    • Birth of a metabolic gene cluster in yeast by adaptive gene relocation
    • Wong, S., and Wolfe, K.H. (2005). Birth of a metabolic gene cluster in yeast by adaptive gene relocation. Nat. Genet. 37: 777-782.
    • (2005) Nat. Genet , vol.37 , pp. 777-782
    • Wong, S.1    Wolfe, K.H.2
  • 46
    • 0035313770 scopus 로고    scopus 로고
    • Higher-order structure of chromatin and chromosomes
    • Woodcock, C.L., and Dimitrov, S. (2001). Higher-order structure of chromatin and chromosomes. Curr. Opin. Genet. Dev. 11: 130-135.
    • (2001) Curr. Opin. Genet. Dev , vol.11 , pp. 130-135
    • Woodcock, C.L.1    Dimitrov, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.