-
1
-
-
14244272868
-
PHENIX: building new software for automated crystallographic structure determination
-
Adams P.D., Grosse-Kunstleve R.W., Hung L.W., Ioerger T.R., McCoy A.J., et al. PHENIX: building new software for automated crystallographic structure determination. Acta Crystallogr. D: Biol. Crystallogr. 2002, 58:1948-1954.
-
(2002)
Acta Crystallogr. D: Biol. Crystallogr.
, vol.58
, pp. 1948-1954
-
-
Adams, P.D.1
Grosse-Kunstleve, R.W.2
Hung, L.W.3
Ioerger, T.R.4
McCoy, A.J.5
-
2
-
-
0032544662
-
SSB protein controls RecBCD enzyme nuclease activity during unwinding: a new role for looped intermediates
-
Anderson D.G., Kowalczykowski S.C. SSB protein controls RecBCD enzyme nuclease activity during unwinding: a new role for looped intermediates. J. Mol. Biol. 1998, 282:275-285.
-
(1998)
J. Mol. Biol.
, vol.282
, pp. 275-285
-
-
Anderson, D.G.1
Kowalczykowski, S.C.2
-
3
-
-
0037450771
-
Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria
-
Aphasizhev R., Aphasizheva I., Nelson R.E., Gao G., Simpson A.M., et al. Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria. EMBO J. 2003, 22:913-924.
-
(2003)
EMBO J.
, vol.22
, pp. 913-924
-
-
Aphasizhev, R.1
Aphasizheva, I.2
Nelson, R.E.3
Gao, G.4
Simpson, A.M.5
-
4
-
-
0036913982
-
OB-fold domains: a snapshot of the evolution of sequence, structure and function
-
Arcus V. OB-fold domains: a snapshot of the evolution of sequence, structure and function. Curr. Opin. Struct. Biol. 2002, 12:794-801.
-
(2002)
Curr. Opin. Struct. Biol.
, vol.12
, pp. 794-801
-
-
Arcus, V.1
-
5
-
-
1342302794
-
From RPA to BRCA2: lessons from single-stranded DNA binding by the OB-fold
-
Bochkarev A., Bochkareva E. From RPA to BRCA2: lessons from single-stranded DNA binding by the OB-fold. Curr. Opin. Struct. Biol. 2004, 14:36-42.
-
(2004)
Curr. Opin. Struct. Biol.
, vol.14
, pp. 36-42
-
-
Bochkarev, A.1
Bochkareva, E.2
-
6
-
-
0037007223
-
Structure of the RPA trimerization core and its role in the multistep DNA-binding mechanism of RPA
-
Bochkareva E., Korolev S., Lees-Miller S.P., Bochkarev A. Structure of the RPA trimerization core and its role in the multistep DNA-binding mechanism of RPA. EMBO J. 2002, 21:1855-1863.
-
(2002)
EMBO J.
, vol.21
, pp. 1855-1863
-
-
Bochkareva, E.1
Korolev, S.2
Lees-Miller, S.P.3
Bochkarev, A.4
-
7
-
-
14644397311
-
TbMP42, a protein component of the RNA editing complex in African trypanosomes, has endo-exoribonuclease activity
-
Brecht M., Niemann M., Schluter E., Muller U.F., Stuart K., et al. TbMP42, a protein component of the RNA editing complex in African trypanosomes, has endo-exoribonuclease activity. Mol. Cell 2005, 17:621-630.
-
(2005)
Mol. Cell
, vol.17
, pp. 621-630
-
-
Brecht, M.1
Niemann, M.2
Schluter, E.3
Muller, U.F.4
Stuart, K.5
-
8
-
-
0037053286
-
Analysis of a multicomponent thermostable DNA polymerase III replicase from an extreme thermophile
-
Bruck I., Yuzhakov A., Yurieva O., Jeruzalmi D., Skangalis M., et al. Analysis of a multicomponent thermostable DNA polymerase III replicase from an extreme thermophile. J. Biol. Chem. 2002, 277:17334-17348.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 17334-17348
-
-
Bruck, I.1
Yuzhakov, A.2
Yurieva, O.3
Jeruzalmi, D.4
Skangalis, M.5
-
9
-
-
0037036364
-
Polylysine induces an antiparallel actin dimer that nucleates filament assembly: crystal structure at 3.5-A resolution
-
Bubb M.R., Govindasamy L., Yarmola E.G., Vorobiev S.M., Almo S.C., et al. Polylysine induces an antiparallel actin dimer that nucleates filament assembly: crystal structure at 3.5-A resolution. J. Biol. Chem. 2002, 277:20999-21006.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 20999-21006
-
-
Bubb, M.R.1
Govindasamy, L.2
Yarmola, E.G.3
Vorobiev, S.M.4
Almo, S.C.5
-
10
-
-
28044439400
-
An essential RNase III insertion editing endonuclease in Trypanosoma brucei
-
Carnes J., Trotter J.R., Ernst N.L., Steinberg A., Stuart K. An essential RNase III insertion editing endonuclease in Trypanosoma brucei. Proc. Natl. Acad. Sci. USA 2005, 102:16614-16619.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 16614-16619
-
-
Carnes, J.1
Trotter, J.R.2
Ernst, N.L.3
Steinberg, A.4
Stuart, K.5
-
11
-
-
37549054714
-
RNA editing in Trypanosoma brucei requires three different editosomes
-
Carnes J., Trotter J.R., Peltan A., Fleck M., Stuart K. RNA editing in Trypanosoma brucei requires three different editosomes. Mol. Cell Biol. 2008, 28:122-130.
-
(2008)
Mol. Cell Biol.
, vol.28
, pp. 122-130
-
-
Carnes, J.1
Trotter, J.R.2
Peltan, A.3
Fleck, M.4
Stuart, K.5
-
12
-
-
64649099756
-
Single-stranded DNA-binding protein complex from Helicobacter pylori suggests an ssDNA-binding surface
-
Chan K.W., Lee Y.J., Wang C.H., Huang H., Sun Y.J. Single-stranded DNA-binding protein complex from Helicobacter pylori suggests an ssDNA-binding surface. J. Mol. Biol. 2009, 388:508-519.
-
(2009)
J. Mol. Biol.
, vol.388
, pp. 508-519
-
-
Chan, K.W.1
Lee, Y.J.2
Wang, C.H.3
Huang, H.4
Sun, Y.J.5
-
13
-
-
0022555837
-
Single-stranded DNA binding proteins required for DNA replication
-
Chase J.W., Williams K.R. Single-stranded DNA binding proteins required for DNA replication. Annu. Rev. Biochem. 1986, 55:103-136.
-
(1986)
Annu. Rev. Biochem.
, vol.55
, pp. 103-136
-
-
Chase, J.W.1
Williams, K.R.2
-
15
-
-
1442280871
-
From the cell biology to the development of new chemotherapeutic approaches against trypanosomatids: dreams and reality
-
e-publication
-
De Souza W. From the cell biology to the development of new chemotherapeutic approaches against trypanosomatids: dreams and reality. Kinetoplastid Biol. Dis. 2002, 1:1-21. e-publication.
-
(2002)
Kinetoplastid Biol. Dis.
, vol.1
, pp. 1-21
-
-
De Souza, W.1
-
16
-
-
4744374004
-
High resolution crystal structure of a key editosome enzyme from Trypanosoma brucei: RNA editing ligase 1
-
Deng J., Schnaufer A., Salavati R., Stuart K.D., Hol W.G. High resolution crystal structure of a key editosome enzyme from Trypanosoma brucei: RNA editing ligase 1. J. Mol. Biol. 2004, 343:601-613.
-
(2004)
J. Mol. Biol.
, vol.343
, pp. 601-613
-
-
Deng, J.1
Schnaufer, A.2
Salavati, R.3
Stuart, K.D.4
Hol, W.G.5
-
17
-
-
28644431836
-
Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei
-
Deng J., Ernst N.L., Turley S., Stuart K.D., Hol W.G. Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei. EMBO J. 2005, 24:4007-4017.
-
(2005)
EMBO J.
, vol.24
, pp. 4007-4017
-
-
Deng, J.1
Ernst, N.L.2
Turley, S.3
Stuart, K.D.4
Hol, W.G.5
-
18
-
-
0037189507
-
Three camelid VHH domains in complex with porcine pancreatic alpha-amylase. Inhibition and versatility of binding topology
-
Desmyter A., Spinelli S., Payan F., Lauwereys M., Wyns L., et al. Three camelid VHH domains in complex with porcine pancreatic alpha-amylase. Inhibition and versatility of binding topology. J. Biol. Chem. 2002, 277:23645-23650.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 23645-23650
-
-
Desmyter, A.1
Spinelli, S.2
Payan, F.3
Lauwereys, M.4
Wyns, L.5
-
19
-
-
33645034034
-
Crystal structure of a single-stranded DNA-binding protein (TM0604) from Thermotoga maritima at 2.60A resolution
-
DiDonato M., Krishna S.S., Schwarzenbacher R., McMullan D., Jaroszewski L., et al. Crystal structure of a single-stranded DNA-binding protein (TM0604) from Thermotoga maritima at 2.60A resolution. Proteins 2006, 63:256-260.
-
(2006)
Proteins
, vol.63
, pp. 256-260
-
-
DiDonato, M.1
Krishna, S.S.2
Schwarzenbacher, R.3
McMullan, D.4
Jaroszewski, L.5
-
20
-
-
0037007232
-
TbMP81 is required for RNA editing in Trypanosoma brucei
-
Drozdz M., Palazzo S.S., Salavati R., O'Rear J., Clayton C., Stuart K. TbMP81 is required for RNA editing in Trypanosoma brucei. EMBO J. 2002, 21:1791-1799.
-
(2002)
EMBO J.
, vol.21
, pp. 1791-1799
-
-
Drozdz, M.1
Palazzo, S.S.2
Salavati, R.3
O'Rear, J.4
Clayton, C.5
Stuart, K.6
-
21
-
-
2942642109
-
The single-stranded DNA-binding protein of Deinococcus radiodurans
-
e-publication
-
Eggington J.M., Haruta N., Wood E.A., Cox M.M. The single-stranded DNA-binding protein of Deinococcus radiodurans. BMC Microbiol. 2004, 4:1-12. e-publication.
-
(2004)
BMC Microbiol.
, vol.4
, pp. 1-12
-
-
Eggington, J.M.1
Haruta, N.2
Wood, E.A.3
Cox, M.M.4
-
23
-
-
65249140056
-
Differential functions of two editosome exoUases in Trypanosoma brucei
-
Ernst N.L., Panicucci B., Carnes J., Stuart K. Differential functions of two editosome exoUases in Trypanosoma brucei. RNA 2009, 15:947-957.
-
(2009)
RNA
, vol.15
, pp. 947-957
-
-
Ernst, N.L.1
Panicucci, B.2
Carnes, J.3
Stuart, K.4
-
24
-
-
0142258170
-
Chemotherapy of human African trypanosomiasis: current and future prospects
-
Fairlamb A.H. Chemotherapy of human African trypanosomiasis: current and future prospects. Trends Parasitol. 2003, 19:488-494.
-
(2003)
Trends Parasitol.
, vol.19
, pp. 488-494
-
-
Fairlamb, A.H.1
-
25
-
-
0034074478
-
Interaction of E. coli single-stranded DNA binding protein (SSB) with exonuclease I. The carboxy-terminus of SSB is the recognition site for the nuclease
-
Genschel J., Curth U., Urbanke C. Interaction of E. coli single-stranded DNA binding protein (SSB) with exonuclease I. The carboxy-terminus of SSB is the recognition site for the nuclease. Biol. Chem. 2000, 381:183-192.
-
(2000)
Biol. Chem.
, vol.381
, pp. 183-192
-
-
Genschel, J.1
Curth, U.2
Urbanke, C.3
-
26
-
-
0032483511
-
The chi psi subunits of DNA polymerase III holoenzyme bind to single-stranded DNA-binding protein (SSB) and facilitate replication of an SSB-coated template
-
Glover B.P., McHenry C.S. The chi psi subunits of DNA polymerase III holoenzyme bind to single-stranded DNA-binding protein (SSB) and facilitate replication of an SSB-coated template. J. Biol. Chem. 1998, 273:23476-23484.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 23476-23484
-
-
Glover, B.P.1
McHenry, C.S.2
-
27
-
-
62649115927
-
Snapshots of the RNA editing machine in trypanosomes captured at different assembly stages in vivo
-
Golas M.M., Bohm C., Sander B., Effenberger K., Brecht M., et al. Snapshots of the RNA editing machine in trypanosomes captured at different assembly stages in vivo. EMBO J. 2009, 28:766-778.
-
(2009)
EMBO J.
, vol.28
, pp. 766-778
-
-
Golas, M.M.1
Bohm, C.2
Sander, B.3
Effenberger, K.4
Brecht, M.5
-
28
-
-
33845516882
-
Facile generation of heat-stable antiviral and antitoxin single domain antibodies from a semisynthetic llama library
-
Goldman E.R., Anderson G.P., Liu J.L., Delehanty J.B., Sherwood L.J., et al. Facile generation of heat-stable antiviral and antitoxin single domain antibodies from a semisynthetic llama library. Anal. Chem. 2006, 78:8245-8255.
-
(2006)
Anal. Chem.
, vol.78
, pp. 8245-8255
-
-
Goldman, E.R.1
Anderson, G.P.2
Liu, J.L.3
Delehanty, J.B.4
Sherwood, L.J.5
-
29
-
-
0032961270
-
ESPript: analysis of multiple sequence alignments in PostScript
-
Gouet P., Courcelle E., Stuart D.I., Metoz F. ESPript: analysis of multiple sequence alignments in PostScript. Bioinformatics 1999, 15:305-308.
-
(1999)
Bioinformatics
, vol.15
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
Metoz, F.4
-
30
-
-
34047109097
-
Cell cycle regulation in Trypanosoma brucei
-
Hammarton T.C. Cell cycle regulation in Trypanosoma brucei. Mol. Biochem. Parasitol. 2007, 153:1-8.
-
(2007)
Mol. Biochem. Parasitol.
, vol.153
, pp. 1-8
-
-
Hammarton, T.C.1
-
31
-
-
0035907374
-
Chimeras between single-stranded DNA-binding proteins from Escherichia coli and Mycobacterium tuberculosis reveal that their C-terminal domains interact with uracil DNA glycosylases
-
Handa P., Acharya N., Varshney U. Chimeras between single-stranded DNA-binding proteins from Escherichia coli and Mycobacterium tuberculosis reveal that their C-terminal domains interact with uracil DNA glycosylases. J. Biol. Chem. 2001, 276:16992-16997.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 16992-16997
-
-
Handa, P.1
Acharya, N.2
Varshney, U.3
-
32
-
-
0032431057
-
Crystal structure of the Oxytricha nova telomere end binding protein complexed with single strand DNA
-
Horvath M.P., Schweiker V.L., Bevilacqua J.M., Ruggles J.A., Schultz S.C. Crystal structure of the Oxytricha nova telomere end binding protein complexed with single strand DNA. Cell 1998, 95:963-974.
-
(1998)
Cell
, vol.95
, pp. 963-974
-
-
Horvath, M.P.1
Schweiker, V.L.2
Bevilacqua, J.M.3
Ruggles, J.A.4
Schultz, S.C.5
-
33
-
-
34548422845
-
Control of neglected tropical diseases
-
Hotez P.J., Molyneux D.H., Fenwick A., Kumaresan J., Sachs S.E., et al. Control of neglected tropical diseases. New Engl. J. Med. 2007, 357:1018-1027.
-
(2007)
New Engl. J. Med.
, vol.357
, pp. 1018-1027
-
-
Hotez, P.J.1
Molyneux, D.H.2
Fenwick, A.3
Kumaresan, J.4
Sachs, S.E.5
-
34
-
-
33750297822
-
Structure of the single-stranded DNA-binding protein SSB from Thermus aquaticus
-
Jedrzejczak R., Dauter M., Dauter Z., Olszewski M., Dlugolecka A., et al. Structure of the single-stranded DNA-binding protein SSB from Thermus aquaticus. Acta Crystallogr. D: Biol. Crystallogr. 2006, 62:1407-1412.
-
(2006)
Acta Crystallogr. D: Biol. Crystallogr.
, vol.62
, pp. 1407-1412
-
-
Jedrzejczak, R.1
Dauter, M.2
Dauter, Z.3
Olszewski, M.4
Dlugolecka, A.5
-
35
-
-
1042278183
-
Disruption of the zinc finger motifs in the Leishmania tarentolae LC-4 (=TbMP63) L-complex editing protein affects the stability of the L-complex
-
Kang X., Falick A.M., Nelson R.E., Gao G., Rogers K., et al. Disruption of the zinc finger motifs in the Leishmania tarentolae LC-4 (=TbMP63) L-complex editing protein affects the stability of the L-complex. J. Biol. Chem. 2004, 279:3893-3899.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 3893-3899
-
-
Kang, X.1
Falick, A.M.2
Nelson, R.E.3
Gao, G.4
Rogers, K.5
-
36
-
-
0037180443
-
Escherichia coli RecO protein anneals ssDNA complexed with its cognate ssDNA-binding protein: a common step in genetic recombination
-
Kantake N., Madiraju M.V., Sugiyama T., Kowalczykowski S.C. Escherichia coli RecO protein anneals ssDNA complexed with its cognate ssDNA-binding protein: a common step in genetic recombination. Proc. Natl. Acad. Sci. USA 2002, 99:15327-15332.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 15327-15332
-
-
Kantake, N.1
Madiraju, M.V.2
Sugiyama, T.3
Kowalczykowski, S.C.4
-
37
-
-
0032522760
-
Devoted to the lagging strand-the subunit of DNA polymerase III holoenzyme contacts SSB to promote processive elongation and sliding clamp assembly
-
Kelman Z., Yuzhakov A., Andjelkovic J., O'Donnell M. Devoted to the lagging strand-the subunit of DNA polymerase III holoenzyme contacts SSB to promote processive elongation and sliding clamp assembly. EMBO J. 1998, 17:2436-2449.
-
(1998)
EMBO J.
, vol.17
, pp. 2436-2449
-
-
Kelman, Z.1
Yuzhakov, A.2
Andjelkovic, J.3
O'Donnell, M.4
-
38
-
-
0037526104
-
Insights into ssDNA recognition by the OB fold from a structural and thermodynamic study of Sulfolobus SSB protein
-
Kerr I.D., Wadsworth R.I., Cubeddu L., Blankenfeldt W., Naismith J.H., et al. Insights into ssDNA recognition by the OB fold from a structural and thermodynamic study of Sulfolobus SSB protein. EMBO J. 2003, 22:2561-2570.
-
(2003)
EMBO J.
, vol.22
, pp. 2561-2570
-
-
Kerr, I.D.1
Wadsworth, R.I.2
Cubeddu, L.3
Blankenfeldt, W.4
Naismith, J.H.5
-
39
-
-
77449102676
-
Modulation of protein properties in living cells using nanobodies
-
Kirchhofer A., Helma J., Schmidthals K., Frauer C., Cui S., et al. Modulation of protein properties in living cells using nanobodies. Nat. Struct. Mol. Biol. 2010, 17:133-138.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 133-138
-
-
Kirchhofer, A.1
Helma, J.2
Schmidthals, K.3
Frauer, C.4
Cui, S.5
-
40
-
-
69249107262
-
Engineering of recombinant crystallization chaperones
-
Koide S. Engineering of recombinant crystallization chaperones. Curr. Opin. Struct. Biol. 2009, 19:449-457.
-
(2009)
Curr. Opin. Struct. Biol.
, vol.19
, pp. 449-457
-
-
Koide, S.1
-
41
-
-
59649092183
-
Crystal structure of the N-terminal domain of the secretin GspD from ETEC determined with the assistance of a nanobody
-
Korotkov K.V., Pardon E., Steyaert J., Hol W.G. Crystal structure of the N-terminal domain of the secretin GspD from ETEC determined with the assistance of a nanobody. Structure 2009, 17:255-265.
-
(2009)
Structure
, vol.17
, pp. 255-265
-
-
Korotkov, K.V.1
Pardon, E.2
Steyaert, J.3
Hol, W.G.4
-
42
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Krissinel E., Henrick K. Inference of macromolecular assemblies from crystalline state. J. Mol. Biol. 2007, 372:774-797.
-
(2007)
J. Mol. Biol.
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
43
-
-
60949108827
-
Nanobody-aided structure determination of the EpsI:EpsJ pseudopilin heterodimer from Vibrio vulnificus
-
Lam A.Y., Pardon E., Korotkov K.V., Hol W.G., Steyaert J. Nanobody-aided structure determination of the EpsI:EpsJ pseudopilin heterodimer from Vibrio vulnificus. J. Struct. Biol. 2009, 166:8-15.
-
(2009)
J. Struct. Biol.
, vol.166
, pp. 8-15
-
-
Lam, A.Y.1
Pardon, E.2
Korotkov, K.V.3
Hol, W.G.4
Steyaert, J.5
-
44
-
-
33846164078
-
In Trypanosoma brucei RNA editing, TbMP18 (band VII) is critical for editosome integrity and for both insertional and deletional cleavages
-
Law J.A., O'Hearn S., Sollner-Webb B. In Trypanosoma brucei RNA editing, TbMP18 (band VII) is critical for editosome integrity and for both insertional and deletional cleavages. Mol. Cell Biol. 2007, 27:777-787.
-
(2007)
Mol. Cell Biol.
, vol.27
, pp. 777-787
-
-
Law, J.A.1
O'Hearn, S.2
Sollner-Webb, B.3
-
45
-
-
44149103662
-
Trypanosoma brucei RNA editing protein TbMP42 (band VI) is crucial for the endonucleolytic cleavages but not the subsequent steps of U-deletion and U-insertion
-
Law J.A., O'Hearn S.F., Sollner-Webb B. Trypanosoma brucei RNA editing protein TbMP42 (band VI) is crucial for the endonucleolytic cleavages but not the subsequent steps of U-deletion and U-insertion. RNA 2008, 14:1187-1200.
-
(2008)
RNA
, vol.14
, pp. 1187-1200
-
-
Law, J.A.1
O'Hearn, S.F.2
Sollner-Webb, B.3
-
46
-
-
33845711540
-
IMGT, the international ImMunoGeneTics information system: a standardized approach for immunogenetics and immunoinformatics
-
Lefranc M.P. IMGT, the international ImMunoGeneTics information system: a standardized approach for immunogenetics and immunoinformatics. Immunome Res. 2005, 1:3.
-
(2005)
Immunome Res.
, vol.1
, pp. 3
-
-
Lefranc, M.P.1
-
47
-
-
68149089810
-
Structure of the core editing complex (L-complex) involved in uridine insertion/deletion RNA editing in trypanosomatid mitochondria
-
Li F., Ge P., Hui W.H., Atanasov I., Rogers K., et al. Structure of the core editing complex (L-complex) involved in uridine insertion/deletion RNA editing in trypanosomatid mitochondria. Proc. Natl. Acad. Sci. USA 2009, 106:12306-12310.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 12306-12310
-
-
Li, F.1
Ge, P.2
Hui, W.H.3
Atanasov, I.4
Rogers, K.5
-
48
-
-
9644264027
-
Crystal structure of PriB, a primosomal DNA replication protein of Escherichia coli
-
Liu J.H., Chang T.W., Huang C.Y., Chen S.U., Wu H.N., et al. Crystal structure of PriB, a primosomal DNA replication protein of Escherichia coli. J. Biol. Chem. 2004, 279:50465-50471.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 50465-50471
-
-
Liu, J.H.1
Chang, T.W.2
Huang, C.Y.3
Chen, S.U.4
Wu, H.N.5
-
49
-
-
0024039462
-
E. coli single strand binding protein: a new look at helix-destabilizing proteins
-
Lohman T.M., Bujalowski W., Overman L.B. E. coli single strand binding protein: a new look at helix-destabilizing proteins. Trends Biochem. Sci. 1988, 13:250-255.
-
(1988)
Trends Biochem. Sci.
, vol.13
, pp. 250-255
-
-
Lohman, T.M.1
Bujalowski, W.2
Overman, L.B.3
-
50
-
-
7944229709
-
Crystal structure of PriB, a component of the Escherichia coli replication restart primosome
-
Lopper M., Holton J.M., Keck J.L. Crystal structure of PriB, a component of the Escherichia coli replication restart primosome. Structure 2004, 12:1967-1975.
-
(2004)
Structure
, vol.12
, pp. 1967-1975
-
-
Lopper, M.1
Holton, J.M.2
Keck, J.L.3
-
51
-
-
0042346293
-
Crystal structure of the intrinsically flexible addiction antidote MazE
-
Loris R., Marianovsky I., Lah J., Laeremans T., Engelberg-Kulka H., et al. Crystal structure of the intrinsically flexible addiction antidote MazE. J. Biol. Chem. 2003, 278:28252-28257.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 28252-28257
-
-
Loris, R.1
Marianovsky, I.2
Lah, J.3
Laeremans, T.4
Engelberg-Kulka, H.5
-
52
-
-
28044460265
-
Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates
-
Lukes J., Hashimi H., Zikova A. Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates. Curr. Genet. 2005, 48:277-299.
-
(2005)
Curr. Genet.
, vol.48
, pp. 277-299
-
-
Lukes, J.1
Hashimi, H.2
Zikova, A.3
-
53
-
-
0034092927
-
Roles of functional loops and the C-terminal segment of a single-stranded DNA binding protein elucidated by X-ray structure analysis
-
Matsumoto T., Morimoto Y., Shibata N., Kinebuchi T., Shimamoto N., et al. Roles of functional loops and the C-terminal segment of a single-stranded DNA binding protein elucidated by X-ray structure analysis. J. Biochem. 2000, 127:329-335.
-
(2000)
J. Biochem.
, vol.127
, pp. 329-335
-
-
Matsumoto, T.1
Morimoto, Y.2
Shibata, N.3
Kinebuchi, T.4
Shimamoto, N.5
-
54
-
-
34447508216
-
Phaser crystallographic software
-
McCoy A.J., Grosse-Kunstleve R.W., Adams P.D., Winn M.D., Storoni L.C., et al. Phaser crystallographic software. J. Appl. Crystallogr. 2007, 40:658-674.
-
(2007)
J. Appl. Crystallogr.
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
-
55
-
-
34147224324
-
The single-stranded DNA-binding protein of Escherichia coli
-
Meyer R.R., Laine P.S. The single-stranded DNA-binding protein of Escherichia coli. Microbiol. Rev. 1990, 54:342-380.
-
(1990)
Microbiol. Rev.
, vol.54
, pp. 342-380
-
-
Meyer, R.R.1
Laine, P.S.2
-
56
-
-
7944224890
-
Biogenesis of peroxisomes and glycosomes: trypanosomatid glycosome assembly is a promising new drug target
-
Moyersoen J., Choe J., Fan E., Hol W.G., Michels P.A. Biogenesis of peroxisomes and glycosomes: trypanosomatid glycosome assembly is a promising new drug target. FEMS Microbiol. Rev. 2004, 28:603-643.
-
(2004)
FEMS Microbiol. Rev.
, vol.28
, pp. 603-643
-
-
Moyersoen, J.1
Choe, J.2
Fan, E.3
Hol, W.G.4
Michels, P.A.5
-
58
-
-
0027479161
-
OB(oligonucleotide/oligosaccharide binding)-fold: common structural and functional solution for non-homologous sequences
-
Murzin A.G. OB(oligonucleotide/oligosaccharide binding)-fold: common structural and functional solution for non-homologous sequences. EMBO J. 1993, 12:861-867.
-
(1993)
EMBO J.
, vol.12
, pp. 861-867
-
-
Murzin, A.G.1
-
59
-
-
0035715877
-
Single domain camel antibodies: current status
-
Muyldermans S. Single domain camel antibodies: current status. J. Biotechnol. 2001, 74:277-302.
-
(2001)
J. Biotechnol.
, vol.74
, pp. 277-302
-
-
Muyldermans, S.1
-
60
-
-
0035312546
-
Recognition of antigens by single-domain antibody fragments: the superfluous luxury of paired domains
-
Muyldermans S., Cambillau C., Wyns L. Recognition of antigens by single-domain antibody fragments: the superfluous luxury of paired domains. Trends Biochem. Sci. 2001, 26:230-235.
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 230-235
-
-
Muyldermans, S.1
Cambillau, C.2
Wyns, L.3
-
61
-
-
0034641743
-
Molecular basis for CD40 signaling mediated by TRAF3
-
Ni C.Z., Welsh K., Leo E., Chiou C.K., Wu H., et al. Molecular basis for CD40 signaling mediated by TRAF3. Proc. Natl. Acad. Sci. USA 2000, 97:10395-10399.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 10395-10399
-
-
Ni, C.Z.1
Welsh, K.2
Leo, E.3
Chiou, C.K.4
Wu, H.5
-
62
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Academic Press, New York
-
Otwinowski Z., Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods in Enzymology 1997, vol. 276:307-326. Academic Press, New York.
-
(1997)
Methods in Enzymology
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
63
-
-
33646870148
-
Compositionally and functionally distinct editosomes in Trypanosoma brucei
-
Panigrahi A.K., Ernst N.L., Domingo G.J., Fleck M., Salavati R., et al. Compositionally and functionally distinct editosomes in Trypanosoma brucei. RNA 2006, 12:1038-1049.
-
(2006)
RNA
, vol.12
, pp. 1038-1049
-
-
Panigrahi, A.K.1
Ernst, N.L.2
Domingo, G.J.3
Fleck, M.4
Salavati, R.5
-
64
-
-
0037379043
-
Identification of novel components of Trypanosoma brucei editosomes
-
Panigrahi A.K., Schnaufer A., Ernst N.L., Wang B., Carmean N., et al. Identification of novel components of Trypanosoma brucei editosomes. RNA 2003, 9:484-492.
-
(2003)
RNA
, vol.9
, pp. 484-492
-
-
Panigrahi, A.K.1
Schnaufer, A.2
Ernst, N.L.3
Wang, B.4
Carmean, N.5
-
65
-
-
0034812949
-
Four related proteins of the Trypanosoma brucei RNA editing complex
-
Panigrahi A.K., Schnaufer A., Carmean N., Igo R.P., Gygi S.P., et al. Four related proteins of the Trypanosoma brucei RNA editing complex. Mol. Cell Biol. 2001, 21:6833-6840.
-
(2001)
Mol. Cell Biol.
, vol.21
, pp. 6833-6840
-
-
Panigrahi, A.K.1
Schnaufer, A.2
Carmean, N.3
Igo, R.P.4
Gygi, S.P.5
-
66
-
-
0031009811
-
Crystal structure of the homo-tetrameric DNA binding domain of Escherichia coli single-stranded DNA-binding protein determined by multiwavelength X-ray diffraction on the selenomethionyl protein at 2.9-A resolution
-
Raghunathan S., Ricard C.S., Lohman T.M., Waksman G. Crystal structure of the homo-tetrameric DNA binding domain of Escherichia coli single-stranded DNA-binding protein determined by multiwavelength X-ray diffraction on the selenomethionyl protein at 2.9-A resolution. Proc. Natl. Acad. Sci. USA 1997, 94:6652-6657.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 6652-6657
-
-
Raghunathan, S.1
Ricard, C.S.2
Lohman, T.M.3
Waksman, G.4
-
67
-
-
0033887437
-
Structure of the DNA binding domain of E. coli SSB bound to ssDNA
-
Raghunathan S., Kozlov A.G., Lohman T.M., Waksman G. Structure of the DNA binding domain of E. coli SSB bound to ssDNA. Nat. Struct. Biol. 2000, 7:648-652.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 648-652
-
-
Raghunathan, S.1
Kozlov, A.G.2
Lohman, T.M.3
Waksman, G.4
-
68
-
-
0030928201
-
Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondria
-
Rusche L.N., Cruz-Reyes J., Piller K.J., Sollner-Webb B. Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondria. EMBO J. 1997, 16:4069-4081.
-
(1997)
EMBO J.
, vol.16
, pp. 4069-4081
-
-
Rusche, L.N.1
Cruz-Reyes, J.2
Piller, K.J.3
Sollner-Webb, B.4
-
69
-
-
0041347886
-
Structure of Mycobacterium tuberculosis single-stranded DNA-binding protein. Variability in quaternary structure and its implications
-
Saikrishnan K., Jeyakanthan J., Venkatesh J., Acharya N., Sekar K., et al. Structure of Mycobacterium tuberculosis single-stranded DNA-binding protein. Variability in quaternary structure and its implications. J. Mol. Biol. 2003, 331:385-393.
-
(2003)
J. Mol. Biol.
, vol.331
, pp. 385-393
-
-
Saikrishnan, K.1
Jeyakanthan, J.2
Venkatesh, J.3
Acharya, N.4
Sekar, K.5
-
70
-
-
25144522675
-
Structure of Mycobacterium smegmatis single-stranded DNA-binding protein and a comparative study involving homologous SSBs: biological implications of structural plasticity and variability in quaternary association
-
Saikrishnan K., Manjunath G.P., Singh P., Jeyakanthan J., Dauter Z., et al. Structure of Mycobacterium smegmatis single-stranded DNA-binding protein and a comparative study involving homologous SSBs: biological implications of structural plasticity and variability in quaternary association. Acta Crystallogr. D: Biol. Crystallogr. 2005, 61:1140-1148.
-
(2005)
Acta Crystallogr. D: Biol. Crystallogr.
, vol.61
, pp. 1140-1148
-
-
Saikrishnan, K.1
Manjunath, G.P.2
Singh, P.3
Jeyakanthan, J.4
Dauter, Z.5
-
71
-
-
33646189413
-
KREPA4, an RNA binding protein essential for editosome integrity and survival of Trypanosoma brucei
-
Salavati R., Ernst N.L., O'Rear J., Gilliam T., Tarun S., et al. KREPA4, an RNA binding protein essential for editosome integrity and survival of Trypanosoma brucei. RNA 2006, 12:819-831.
-
(2006)
RNA
, vol.12
, pp. 819-831
-
-
Salavati, R.1
Ernst, N.L.2
O'Rear, J.3
Gilliam, T.4
Tarun, S.5
-
72
-
-
3042625942
-
The C-terminal domain of full-length E. coli SSB is disordered even when bound to DNA
-
Savvides S.N., Raghunathan S., Futterer K., Kozlov A.G., Lohman T.M., et al. The C-terminal domain of full-length E. coli SSB is disordered even when bound to DNA. Protein Sci. 2004, 13:1942-1947.
-
(2004)
Protein Sci.
, vol.13
, pp. 1942-1947
-
-
Savvides, S.N.1
Raghunathan, S.2
Futterer, K.3
Kozlov, A.G.4
Lohman, T.M.5
-
73
-
-
0141922994
-
Separate insertion and deletion subcomplexes of the Trypanosoma brucei RNA editing complex
-
Schnaufer A., Ernst N.L., Palazzo S.S., O'Rear J., Salavati R., et al. Separate insertion and deletion subcomplexes of the Trypanosoma brucei RNA editing complex. Mol. Cell 2003, 12:307-319.
-
(2003)
Mol. Cell
, vol.12
, pp. 307-319
-
-
Schnaufer, A.1
Ernst, N.L.2
Palazzo, S.S.3
O'Rear, J.4
Salavati, R.5
-
74
-
-
77949327311
-
A protein-protein interaction map of trypanosome 20S editosomes
-
Schnaufer A., Wu M., Park Y.J., Nakai T., Deng J., et al. A protein-protein interaction map of trypanosome 20S editosomes. J. Biol. Chem. 2010, 285:5282-5295.
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 5282-5295
-
-
Schnaufer, A.1
Wu, M.2
Park, Y.J.3
Nakai, T.4
Deng, J.5
-
75
-
-
54349118941
-
SSB as an organizer/mobilizer of genome maintenance complexes
-
Shereda R.D., Kozlov A.G., Lohman T.M., Cox M.M., Keck J.L. SSB as an organizer/mobilizer of genome maintenance complexes. Crit. Rev. Biochem. Mol. Biol. 2008, 43:289-318.
-
(2008)
Crit. Rev. Biochem. Mol. Biol.
, vol.43
, pp. 289-318
-
-
Shereda, R.D.1
Kozlov, A.G.2
Lohman, T.M.3
Cox, M.M.4
Keck, J.L.5
-
76
-
-
10644282271
-
Crystal structure of a biologically functional form of PriB from Escherichia coli reveals a potential single-stranded DNA-binding site
-
Shioi S., Ose T., Maenaka K., Shiroishi M., Abe Y., et al. Crystal structure of a biologically functional form of PriB from Escherichia coli reveals a potential single-stranded DNA-binding site. Biochem. Biophys. Res. Commun. 2005, 326:766-776.
-
(2005)
Biochem. Biophys. Res. Commun.
, vol.326
, pp. 766-776
-
-
Shioi, S.1
Ose, T.2
Maenaka, K.3
Shiroishi, M.4
Abe, Y.5
-
77
-
-
1642580825
-
Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing
-
Simpson L., Aphasizhev R., Gao G., Kang X. Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing. RNA 2004, 10:159-170.
-
(2004)
RNA
, vol.10
, pp. 159-170
-
-
Simpson, L.1
Aphasizhev, R.2
Gao, G.3
Kang, X.4
-
79
-
-
0035800596
-
Lateral recognition of a dye hapten by a llama VHH domain
-
Spinelli S., Tegoni M., Frenken L., van Vliet C., Cambillau C. Lateral recognition of a dye hapten by a llama VHH domain. J. Mol. Biol. 2001, 311:123-129.
-
(2001)
J. Mol. Biol.
, vol.311
, pp. 123-129
-
-
Spinelli, S.1
Tegoni, M.2
Frenken, L.3
van Vliet, C.4
Cambillau, C.5
-
80
-
-
67749120188
-
Helical extension of the neuronal SNARE complex into the membrane
-
Stein A., Weber G., Wahl M.C., Jahn R. Helical extension of the neuronal SNARE complex into the membrane. Nature 2009, 460:525-528.
-
(2009)
Nature
, vol.460
, pp. 525-528
-
-
Stein, A.1
Weber, G.2
Wahl, M.C.3
Jahn, R.4
-
81
-
-
13244290067
-
Complex management: RNA editing in trypanosomes
-
Stuart K.D., Schnaufer A., Ernst N.L., Panigrahi A.K. Complex management: RNA editing in trypanosomes. Trends Biochem. Sci. 2005, 30:97-105.
-
(2005)
Trends Biochem. Sci.
, vol.30
, pp. 97-105
-
-
Stuart, K.D.1
Schnaufer, A.2
Ernst, N.L.3
Panigrahi, A.K.4
-
82
-
-
38049079910
-
The challenges of Chagas disease - grim outlook or glimmer of hope
-
Tarleton R.L., Reithinger R., Urbina J.A., Kitron U., Gurtler R.E. The challenges of Chagas disease - grim outlook or glimmer of hope. PLoS Med. 2007, 4:e332.
-
(2007)
PLoS Med.
, vol.4
-
-
Tarleton, R.L.1
Reithinger, R.2
Urbina, J.A.3
Kitron, U.4
Gurtler, R.E.5
-
83
-
-
38649125860
-
KREPA6 is an RNA-binding protein essential for editosome integrity and survival of Trypanosoma brucei
-
Tarun S.Z., Schnaufer A., Ernst N.L., Proff R., Deng J., et al. KREPA6 is an RNA-binding protein essential for editosome integrity and survival of Trypanosoma brucei. RNA 2008, 14:347-358.
-
(2008)
RNA
, vol.14
, pp. 347-358
-
-
Tarun, S.Z.1
Schnaufer, A.2
Ernst, N.L.3
Proff, R.4
Deng, J.5
-
84
-
-
46449122768
-
Toward chaperone-assisted crystallography: protein engineering enhancement of crystal packing and X-ray phasing capabilities of a camelid single-domain antibody (VHH) scaffold
-
Tereshko V., Uysal S., Koide A., Margalef K., Koide S., et al. Toward chaperone-assisted crystallography: protein engineering enhancement of crystal packing and X-ray phasing capabilities of a camelid single-domain antibody (VHH) scaffold. Protein Sci. 2008, 17:1175-1187.
-
(2008)
Protein Sci.
, vol.17
, pp. 1175-1187
-
-
Tereshko, V.1
Uysal, S.2
Koide, A.3
Margalef, K.4
Koide, S.5
-
86
-
-
0028034452
-
Protein interactions in genetic recombination in Escherichia coli. Interactions involving RecO and RecR overcome the inhibition of RecA by single-stranded DNA-binding protein
-
Umezu K., Kolodner R.D. Protein interactions in genetic recombination in Escherichia coli. Interactions involving RecO and RecR overcome the inhibition of RecA by single-stranded DNA-binding protein. J. Biol. Chem. 1994, 269:30005-30013.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 30005-30013
-
-
Umezu, K.1
Kolodner, R.D.2
-
87
-
-
53949111444
-
Guide RNA-binding complex from mitochondria of trypanosomatids
-
Weng J., Aphasizheva I., Etheridge R.D., Huang L., Wang X., et al. Guide RNA-binding complex from mitochondria of trypanosomatids. Mol. Cell 2008, 32:198-209.
-
(2008)
Mol. Cell
, vol.32
, pp. 198-209
-
-
Weng, J.1
Aphasizheva, I.2
Etheridge, R.D.3
Huang, L.4
Wang, X.5
-
89
-
-
0043163774
-
DNA polymerase III chi subunit ties single-stranded DNA binding protein to the bacterial replication machinery
-
Witte G., Urbanke C., Curth U. DNA polymerase III chi subunit ties single-stranded DNA binding protein to the bacterial replication machinery. Nucleic Acids Res. 2003, 31:4434-4440.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 4434-4440
-
-
Witte, G.1
Urbanke, C.2
Curth, U.3
-
90
-
-
0344668871
-
Comparative analysis of editosome proteins in trypanosomatids
-
Worthey E.A., Schnaufer A., Mian I.S., Stuart K., Salavati R. Comparative analysis of editosome proteins in trypanosomatids. Nucleic Acids Res. 2003, 31:6392-6408.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 6392-6408
-
-
Worthey, E.A.1
Schnaufer, A.2
Mian, I.S.3
Stuart, K.4
Salavati, R.5
-
91
-
-
0031023811
-
Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4A resolution
-
Yang C., Curth U., Urbanke C., Kang C. Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4A resolution. Nat. Struct. Biol. 1997, 4:153-157.
-
(1997)
Nat. Struct. Biol.
, vol.4
, pp. 153-157
-
-
Yang, C.1
Curth, U.2
Urbanke, C.3
Kang, C.4
-
92
-
-
18544372595
-
BRCA2 function in DNA binding and recombination from a BRCA2-DSS1-ssDNA structure
-
Yang H., Jeffrey P.D., Miller J., Kinnucan E., Sun Y., et al. BRCA2 function in DNA binding and recombination from a BRCA2-DSS1-ssDNA structure. Science 2002, 297:1837-1848.
-
(2002)
Science
, vol.297
, pp. 1837-1848
-
-
Yang, H.1
Jeffrey, P.D.2
Miller, J.3
Kinnucan, E.4
Sun, Y.5
|