-
1
-
-
0028980260
-
Conserved kappa B element located downstream of the tumor necrosis factor alpha gene: Distinct NF-kappa B binding pattern and enhancer activity in LPS activated murine macrophages
-
Kuprash DV, Udalova IA, Turetskaya RL, Rice NR, Nedospasov SA. Conserved kappa B element located downstream of the tumor necrosis factor alpha gene: distinct NF-kappa B binding pattern and enhancer activity in LPS activated murine macrophages. Oncogene 1995; 11: 97-106.
-
(1995)
Oncogene
, vol.11
, pp. 97-106
-
-
Kuprash, D.V.1
Udalova, I.A.2
Turetskaya, R.L.3
Rice, N.R.4
Nedospasov, S.A.5
-
2
-
-
0025789094
-
Enhancers and transcription factors controlling the inducibility of the tumor necrosis factor-alpha promoter in primary macrophages
-
Drouet C, Shakhov AN, Jongeneel CV. Enhancers and transcription factors controlling the inducibility of the tumor necrosis factor-alpha promoter in primary macrophages. J Immunol 1991; 147: 1694-1700.
-
(1991)
J Immunol
, vol.147
, pp. 1694-1700
-
-
Drouet, C.1
Shakhov, A.N.2
Jongeneel, C.V.3
-
3
-
-
34249739683
-
Post-induction, stimulus-specific regulation of tumor necrosis factor mRNA expression
-
DOI 10.1074/jbc.M611418200
-
Tsytsykova AV, Falvo JV, Schmidt-Supprian M, Courtois G, Thanos D, Goldfeld AE. Post-induction, stimulus-specific regulation of tumor necrosis factor mRNA expression. J Biol Chem 2007; 282: 11629-11638. (Pubitemid 47100663)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.16
, pp. 11629-11638
-
-
Tsytsykova, A.V.1
Falvo, J.V.2
Schmidt-Supprian, M.3
Courtois, G.4
Thanos, D.5
Goldfeld, A.E.6
-
4
-
-
0033998440
-
Stimulus-specific assembly of enhancer complexes on the tumor necrosis factor alpha gene promoter
-
DOI 10.1128/MCB.20.6.2239-2247.2000
-
Falvo JV, Uglialoro AM, Brinkman BM, Merika M, Parekh BS, Tsai EY et al. Stimulus-specific assembly of enhancer complexes on the tumor necrosis factor alpha gene promoter. Mol Cell Biol 2000; 20: 2239-2247. (Pubitemid 30123839)
-
(2000)
Molecular and Cellular Biology
, vol.20
, Issue.6
, pp. 2239-2247
-
-
Falvo, J.V.1
Uglialoro, A.M.2
Brinkman, B.M.N.3
Merika, M.4
Parekh, B.S.5
Tsai, E.Y.6
King, H.C.7
Morielli, A.D.8
Peralta, E.G.9
Maniatis, T.10
Thanos, D.11
Goldfeld, A.E.12
-
5
-
-
50849117130
-
Chromatin profiling across the human tumour necrosis factor gene locus reveals a complex, cell type-specific landscape with novel regulatory elements
-
Taylor JM, Wicks K, Vandiedonck C, Knight JC. Chromatin profiling across the human tumour necrosis factor gene locus reveals a complex, cell type-specific landscape with novel regulatory elements. Nucleic Acids Res 2008; 36: 4845-4862.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 4845-4862
-
-
Taylor, J.M.1
Wicks, K.2
Vandiedonck, C.3
Knight, J.C.4
-
6
-
-
36749019654
-
Activation-dependent intrachromosomal interactions formed by the TNF gene promoter and two distal enhancers
-
DOI 10.1073/pnas.0708210104
-
Tsytsykova AV, Rajsbaum R, Falvo JV, Ligeiro F, Neely SR, Goldfeld AE. Activation-dependent intrachromosomal interactions formed by the TNF gene promoter and two distal enhancers. Proc Natl Acad Sci USA 2007; 104: 16850-16855. (Pubitemid 350210954)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.43
, pp. 16850-16855
-
-
Tsytsykova, A.V.1
Rajsbaum, R.2
Falvo, J.V.3
Ligeiro, F.4
Neely, S.R.5
Goldfeld, A.E.6
-
7
-
-
0029923540
-
Functional analysis of the lymphotoxin-β promoter: Sequence requirements for PMA activation
-
Kuprash DV, Osipovich OA, Pokholok DK, Alimzhanov MB, Biragyn A, Turetskaya RL et al. Functional analysis of the lymphotoxin-beta promoter. Sequence requirements for PMA activation. J Immunol 1996; 156: 2465-2472. (Pubitemid 26091572)
-
(1996)
Journal of Immunology
, vol.156
, Issue.7
, pp. 2465-2472
-
-
Kuprash, D.V.1
Osipovich, O.A.2
Pokholok, D.K.3
Alimzhanov, M.B.4
Biragyn, A.5
Turetskaya, R.L.6
Nedospasov, S.A.7
-
8
-
-
1642290927
-
TNF and Phorbol Esters Induce Lymphotoxin-β Expression through Distinct Pathways Involving Ets and NF-κB Family Members
-
Voon DC, Subrata LS, Karimi M, Ulgiati D, Abraham LJ. TNF and phorbol esters induce lymphotoxin-beta expression through distinct pathways involving Ets and NF-kappa B family members. J Immunol 2004; 172: 4332-4341. (Pubitemid 38375248)
-
(2004)
Journal of Immunology
, vol.172
, Issue.7
, pp. 4332-4341
-
-
Voon, D.C.1
Subrata, L.S.2
Karimi, M.3
Ulgiati, D.4
Abraham, L.J.5
-
9
-
-
0025519111
-
Tumor necrosis factor beta (TNF-beta) induces binding of the NF-kappa B transcription factor to a high-affinity kappa B element in the TNF-beta promoter
-
Messer G, Weiss EH, Baeuerle PA. Tumor necrosis factor beta (TNF-beta) induces binding of the NF-kappa B transcription factor to a high-affinity kappa B element in the TNF-beta promoter. Cytokine 1990; 2: 389-397.
-
(1990)
Cytokine
, vol.2
, pp. 389-397
-
-
Messer, G.1
Weiss, E.H.2
Baeuerle, P.A.3
-
10
-
-
0027415109
-
Lymphotoxin β, a novel member of the TNF family that forms a heteromeric complex with lymphotoxin on the cell surface
-
DOI 10.1016/0092-8674(93)90574-A
-
Browning JL, Ngam-ek A, Lawton P, DeMarinis J, Tizard R, Chow EP et al. Lymphotoxin beta, a novel member of the TNF family that forms a heteromeric complex with lymphotoxin on the cell surface. Cell 1993; 72: 847-856. (Pubitemid 23110227)
-
(1993)
Cell
, vol.72
, Issue.6
, pp. 847-856
-
-
Browning, J.L.1
Ngam-ek, A.2
Lawton, P.3
DeMarinis, J.4
Tizard, R.5
Chow, E.P.6
Hession, C.7
O'Brine-Greco, B.8
Foley, S.F.9
Ware, C.F.10
-
11
-
-
47249139528
-
Inhibition of the lymphotoxin pathway as a therapy for autoimmune disease
-
DOI 10.1111/j.1600-065X.2008.00633.x
-
Browning JL. Inhibition of the lymphotoxin pathway as a therapy for autoimmune disease. Immunol Rev 2008; 223: 202-220. (Pubitemid 351986178)
-
(2008)
Immunological Reviews
, vol.223
, Issue.1
, pp. 202-220
-
-
Browning, J.L.1
-
12
-
-
33947545680
-
The unconventional role of LTαβ in T cell differentiation
-
DOI 10.1016/j.it.2007.02.005, PII S1471490607000476
-
Elewaut D, Ware CF. The unconventional role of LT alpha beta in T cell differentiation. Trends Immunol 2007; 28: 169-175. (Pubitemid 46467519)
-
(2007)
Trends in Immunology
, vol.28
, Issue.4
, pp. 169-175
-
-
Elewaut, D.1
Ware, C.F.2
-
13
-
-
33747401325
-
Expression of lymphotoxin beta governs immunity at two distinct levels
-
DOI 10.1002/eji.200626255
-
Junt T, Tumanov AV, Harris N, Heikenwalder M, Zeller N, Kuprash DV et al. Expression of lymphotoxin beta governs immunity at two distinct levels. Eur J Immunol 2006; 36: 2061-2075. (Pubitemid 44251752)
-
(2006)
European Journal of Immunology
, vol.36
, Issue.8
, pp. 2061-2075
-
-
Tobias, J.1
Tumanov, A.V.2
Harris, N.3
Heikenwalder, M.4
Zeller, N.5
Kuprash, D.V.6
Aguzzi, A.7
Burkhard, L.8
Nedospasov, S.A.9
Zinkernagel, R.M.10
-
14
-
-
47249148425
-
Targeting lymphocyte activation through the lymphotoxin and LIGHT pathways
-
DOI 10.1111/j.1600-065X.2008.00629.x
-
Ware CF. Targeting lymphocyte activation through the lymphotoxin and LIGHT pathways. Immunol Rev 2008; 223: 186-201. (Pubitemid 351986174)
-
(2008)
Immunological Reviews
, vol.223
, Issue.1
, pp. 186-201
-
-
Ware, C.F.1
-
15
-
-
0031571868
-
Cytokine patterns in tuberculous and sarcoid granulomas: Correlations with histopathologic features of the granulomatous response
-
Bergeron A, Bonay M, Kambouchner M, Lecossier D, Riquet M, Soler P et al. Cytokine patterns in tuberculous and sarcoid granulomas: correlations with histopathologic features of the granulomatous response. J Immunol 1997; 159: 3034-3043. (Pubitemid 127681328)
-
(1997)
Journal of Immunology
, vol.159
, Issue.6
, pp. 3034-3043
-
-
Bergeron, A.1
Bonay, M.2
Kambouchner, M.3
Lecossier, D.4
Riquet, M.5
Soler, P.6
Hance, A.7
Tazi, A.8
-
16
-
-
0037218879
-
Expression of lymphotoxin-beta (LT-β) in chronic inflammatory conditions
-
DOI 10.1002/path.1249
-
Agyekum S, Church A, Sohail M, Krausz T, Van Noorden S, Polak J et al. Expression of lymphotoxin-beta (LT-beta) in chronic inflammatory conditions. J Pathol 2003; 199: 115-121. (Pubitemid 36054736)
-
(2003)
Journal of Pathology
, vol.199
, Issue.1
, pp. 115-121
-
-
Agyekum, S.1
Church, A.2
Sohail, M.3
Krausz, T.4
Van Noorden, S.5
Polak, J.6
Cohen, J.7
-
17
-
-
17644400505
-
Network communications: Lymphotoxins, LIGHT, and TNF
-
DOI 10.1146/annurev.immunol.23.021704.115719
-
Ware CF. Network communications: lymphotoxins, LIGHT, and TNF. Annu Rev Immunol 2005; 23: 787-819. (Pubitemid 40563185)
-
(2005)
Annual Review of Immunology
, vol.23
, pp. 787-819
-
-
Ware, C.F.1
-
18
-
-
0035677859
-
Regulation of lymphotoxin-β by tumor necrosis factor, phorbol myristate acetate, and ionomycin in Jurkat T cells
-
DOI 10.1089/107999001753289532
-
Voon DC, Subrata LS, Abraham LJ. Regulation of lymphotoxin- beta by tumor necrosis factor, phorbol myristate acetate, and ionomycin in Jurkat T cells. J Interferon Cytokine Res 2001; 21: 921-930. (Pubitemid 34048718)
-
(2001)
Journal of Interferon and Cytokine Research
, vol.21
, Issue.11
, pp. 921-930
-
-
Voon, D.C.1
Subrata, L.S.2
Abraham, L.J.3
-
19
-
-
23744458086
-
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
-
DOI 10.1101/gr.3715005
-
Siepel A, Bejerano G, Pedersen JS, Hinrichs AS, Hou M, Rosenbloom K et al. Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. Genome Res 2005; 15: 1034-1050. (Pubitemid 41126859)
-
(2005)
Genome Research
, vol.15
, Issue.8
, pp. 1034-1050
-
-
Siepel, A.1
Bejerano, G.2
Pedersen, J.S.3
Hinrichs, A.S.4
Hou, M.5
Rosenbloom, K.6
Clawson, H.7
Spieth, J.8
Hillier, L.W.9
Richards, S.10
Weinstock, G.M.11
Wilson, R.K.12
Gibbs, R.A.13
Kent, W.J.14
Miller, W.15
Haussler, D.16
-
20
-
-
0036079158
-
The human genome browser at UCSC
-
DOI 10.1101/gr.229102. Article published online before print in May 2002
-
Kent WJ, Sugnet CW, Furey TS, Roskin KM, Pringle TH, Zahler AM et al. The human genome browser at UCSC. Genome Res 2002; 12: 996-1006. (Pubitemid 34662293)
-
(2002)
Genome Research
, vol.12
, Issue.6
, pp. 996-1006
-
-
James Kent, W.1
Sugnet, C.W.2
Furey, T.S.3
Roskin, K.M.4
Pringle, T.H.5
Zahler, A.M.6
Haussler, D.7
-
21
-
-
0041903634
-
Identification of conserved regulatory elements by comparative genome analysis
-
Lenhard B, Sandelin A, Mendoza L, Engstrom P, Jareborg N, Wasserman WW. Identification of conserved regulatory elements by comparative genome analysis. J Biol 2003; 2: 13.
-
(2003)
J Biol
, vol.2
, pp. 13
-
-
Lenhard, B.1
Sandelin, A.2
Mendoza, L.3
Engstrom, P.4
Jareborg, N.5
Wasserman, W.W.6
-
22
-
-
0347125328
-
JASPAR: An open-access database for eukaryotic transcription factor binding profiles
-
Sandelin A, AlkemaW, Engstrom P,WassermanWW, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic Acids Res 2004; 32: D91-D94. (Pubitemid 38081611)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.DATABASE ISS.
-
-
Sandelin, A.1
Alkema, W.2
Engstrom, P.3
Wasserman, W.W.4
Lenhard, B.5
-
23
-
-
3242891274
-
ConSite: Web-based prediction of regulatory elements using cross-species comparison
-
DOI 10.1093/nar/gkh372
-
Sandelin A, Wasserman WW, Lenhard B. ConSite: web-based prediction of regulatory elements using cross-species comparison. Nucleic Acids Res 2004; 32: W249-W252. (Pubitemid 38997338)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.WEB SERVER ISS.
-
-
Sandelin, A.1
Wasserman, W.W.2
Lenhard, B.3
-
24
-
-
0037083376
-
Capturing chromosome conformation
-
DOI 10.1126/science.1067799
-
Dekker J, Rippe K, Dekker M, Kleckner N. Capturing chromosome conformation. Science 2002; 295: 1306-1311. (Pubitemid 34157624)
-
(2002)
Science
, vol.295
, Issue.5558
, pp. 1306-1311
-
-
Dekker, J.1
Rippe, K.2
Dekker, M.3
Kleckner, N.4
-
25
-
-
34548565667
-
Quantitative analysis of chromosome conformation capture assays (3C-qPCR)
-
Hagege H, Klous P, Braem C, Splinter E, Dekker J, Cathala G et al. Quantitative analysis of chromosome conformation capture assays (3C-qPCR). Nat Protoc 2007; 2: 1722-1733.
-
(2007)
Nat Protoc
, vol.2
, pp. 1722-1733
-
-
Hagege, H.1
Klous, P.2
Braem, C.3
Splinter, E.4
Dekker, J.5
Cathala, G.6
-
26
-
-
65649115253
-
CTCF and its protein partners: Divide and rule?
-
Zlatanova J, Caiafa P. CTCF and its protein partners: divide and rule? J Cell Sci 2009; 122: 1275-1284.
-
(2009)
J Cell Sci
, vol.122
, pp. 1275-1284
-
-
Zlatanova, J.1
Caiafa, P.2
-
27
-
-
67549119096
-
CTCF: Master weaver of the genome
-
Phillips JE, Corces VG. CTCF: master weaver of the genome. Cell 2009; 137: 1194-1211.
-
(2009)
Cell
, vol.137
, pp. 1194-1211
-
-
Phillips, J.E.1
Corces, V.G.2
-
28
-
-
33947201809
-
Analysis of the Vertebrate Insulator Protein CTCF-Binding Sites in the Human Genome
-
DOI 10.1016/j.cell.2006.12.048, PII S009286740700205X
-
Kim TH, Abdullaev ZK, Smith AD, Ching KA, Loukinov DI, Green RD et al. Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome. Cell 2007; 128: 1231-1245. (Pubitemid 46427876)
-
(2007)
Cell
, vol.128
, Issue.6
, pp. 1231-1245
-
-
Kim, T.H.1
Abdullaev, Z.K.2
Smith, A.D.3
Ching, K.A.4
Loukinov, D.I.5
Green, RolandD.6
Zhang, M.Q.7
Lobanenkov, V.V.8
Ren, B.9
-
29
-
-
38549161074
-
CTCFBSDB: A CTCF-binding site database for characterization of vertebrate genomic insulators
-
DOI 10.1093/nar/gkm875
-
Bao L, Zhou M, Cui Y. CTCFBSDB: a CTCF-binding site database for characterization of vertebrate genomic insulators. Nucleic Acids Res 2008; 36: D83-D87. (Pubitemid 351149700)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.SUPPL. 1
-
-
Bao, L.1
Zhou, M.2
Cui, Y.3
-
30
-
-
63049126348
-
A conserved insulator that recruits CTCF and cohesin exists between the closely related but divergently regulated interleukin-3 and granulocyte- macrophage colony-stimulating factor genes
-
Bowers SR, Mirabella F, Calero-Nieto FJ, Valeaux S, Hadjur S, Baxter EW et al. A conserved insulator that recruits CTCF and cohesin exists between the closely related but divergently regulated interleukin-3 and granulocyte- macrophage colony-stimulating factor genes. Mol Cell Biol 2009; 29: 1682-1693.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 1682-1693
-
-
Bowers, S.R.1
Mirabella, F.2
Calero-Nieto, F.J.3
Valeaux, S.4
Hadjur, S.5
Baxter, E.W.6
-
31
-
-
34249026300
-
High-Resolution Profiling of Histone Methylations in the Human Genome
-
DOI 10.1016/j.cell.2007.05.009, PII S0092867407006009
-
Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z et al. High-resolution profiling of histone methylations in the human genome. Cell 2007; 129: 823-837. (Pubitemid 46802390)
-
(2007)
Cell
, vol.129
, Issue.4
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.-Y.4
Schones, D.E.5
Wang, Z.6
Wei, G.7
Chepelev, I.8
Zhao, K.9
-
32
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
DOI 10.1038/nature06008, PII NATURE06008
-
Mikkelsen TS, Ku M, Jaffe DB, Issac B, Lieberman E, Giannoukos G et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature 2007; 448: 553-560. (Pubitemid 47206934)
-
(2007)
Nature
, vol.448
, Issue.7153
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
Giannoukos, G.6
Alvarez, P.7
Brockman, W.8
Kim, T.-K.9
Koche, R.P.10
Lee, W.11
Mendenhall, E.12
O'Donovan, A.13
Presser, A.14
Russ, C.15
Xie, X.16
Meissner, A.17
Wernig, M.18
Jaenisch, R.19
Nusbaum, C.20
Lander, E.S.21
Bernstein, B.E.22
more..
-
33
-
-
0028179614
-
A lymphotoxin-beta-specific receptor
-
Crowe PD, VanArsdale TL, Walter BN, Ware CF, Hession C, Ehrenfels B et al. A lymphotoxin-beta-specific receptor. Science 1994; 264: 707-710. (Pubitemid 2070849)
-
(1994)
Science
, vol.264
, Issue.5159
, pp. 707-710
-
-
Crowe, P.D.1
VanArsdale, T.L.2
Walter, B.N.3
Ware, C.F.4
Hession, C.5
Ehrenfels, B.6
Browning, J.L.7
Din, W.S.8
Goodwin, R.G.9
Smith, C.A.10
-
34
-
-
0025675441
-
A novel sequence-specific DNA binding protein which interacts with three regularly spaced direct repeats of the CCCTC-motif in the 5′-flanking sequence of the chicken c-myc gene
-
Lobanenkov VV, Nicolas RH, Adler VV, Paterson H, Klenova EM, Polotskaja AV et al. A novel sequence-specific DNA binding protein which interacts with three regularly spaced direct repeats of the CCCTC-motif in the 50-flanking sequence of the chicken c-myc gene. Oncogene 1990; 5: 1743-1753. (Pubitemid 120034699)
-
(1990)
Oncogene
, vol.5
, Issue.12
, pp. 1743-1753
-
-
Lobanenkov, V.V.1
Nicolas, R.H.2
Adler, V.V.3
Paterson, H.4
Klenova, E.M.5
Polotskaja, A.V.6
Goodwin, G.H.7
-
35
-
-
0029929793
-
An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes
-
Filippova GN, Fagerlie S, Klenova EM, Myers C, Dehner Y, Goodwin G et al. An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes. Mol Cell Biol 1996; 16: 2802-2813. (Pubitemid 26161284)
-
(1996)
Molecular and Cellular Biology
, vol.16
, Issue.6
, pp. 2802-2813
-
-
Filippova, G.N.1
Fagerlie, S.2
Klenova, E.M.3
Myers, C.4
Dehner, Y.5
Goodwin, G.6
Neiman, P.E.7
Collins, S.J.8
Lobanenkov, V.V.9
-
36
-
-
53549127289
-
CTCF regulates allelic expression of Igf2 by orchestrating a promoter- polycomb repressive complex 2 intrachromosomal loop
-
Li T, Hu JF, Qiu X, Ling J, Chen H, Wang S et al. CTCF regulates allelic expression of Igf2 by orchestrating a promoter- polycomb repressive complex 2 intrachromosomal loop. Mol Cell Biol 2008; 28: 6473-6482.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 6473-6482
-
-
Li, T.1
Hu, J.F.2
Qiu, X.3
Ling, J.4
Chen, H.5
Wang, S.6
-
37
-
-
38549129312
-
CTCF is the master organizer of domain-wide allele-specific chromatin at the H19/Igf2 imprinted region
-
DOI 10.1128/MCB.01361-07
-
Han L, Lee DH, Szabo PE. CTCF is the master organizer of domain-wide allele-specific chromatin at the H19/Igf2 imprinted region. Mol Cell Biol 2008; 28: 1124-1135. (Pubitemid 351160068)
-
(2008)
Molecular and Cellular Biology
, vol.28
, Issue.3
, pp. 1124-1135
-
-
Han, L.1
Lee, D.-H.2
Szabo, P.E.3
-
38
-
-
33845969545
-
Identification of a Ctcf Cofactor, Yy1, for the X Chromosome Binary Switch
-
DOI 10.1016/j.molcel.2006.11.017, PII S109727650600788X
-
Donohoe ME, Zhang LF, Xu N, Shi Y, Lee JT. Identification of a Ctcf cofactor, Yy1, for the X chromosome binary switch. Mol Cell 2007; 25: 43-56. (Pubitemid 46049057)
-
(2007)
Molecular Cell
, vol.25
, Issue.1
, pp. 43-56
-
-
Donohoe, M.E.1
Zhang, L.-F.2
Xu, N.3
Shi, Y.4
Lee, J.T.5
-
40
-
-
49249130600
-
Multiple YY1 and CTCF binding sites in imprinting control regions
-
Kim J. Multiple YY1 and CTCF binding sites in imprinting control regions. Epigenetics 2008; 3: 115-118.
-
(2008)
Epigenetics
, vol.3
, pp. 115-118
-
-
Kim, J.1
-
41
-
-
0037381011
-
In vivo characterization of regulatory polymorphisms by allele-specific quantification of RNA polymerase loading
-
DOI 10.1038/ng1124
-
Knight JC, Keating BJ, Rockett KA, Kwiatkowski DP. In vivo characterization of regulatory polymorphisms by allele-specific quantification of RNA polymerase loading. Nat Genet 2003; 33: 469-475. (Pubitemid 36390008)
-
(2003)
Nature Genetics
, vol.33
, Issue.4
, pp. 469-475
-
-
Knight, J.C.1
Keating, B.J.2
Rockett, K.A.3
Kwiatkowski, D.P.4
-
42
-
-
34447513163
-
Epigenetic regulation of tumor necrosis factor alpha
-
DOI 10.1128/MCB.02429-06
-
Sullivan KE, Reddy AB, Dietzmann K, Suriano AR, Kocieda VP, Stewart M et al. Epigenetic regulation of tumor necrosis factor alpha. Mol Cell Biol 2007; 27: 5147-5160. (Pubitemid 47068289)
-
(2007)
Molecular and Cellular Biology
, vol.27
, Issue.14
, pp. 5147-5160
-
-
Sullivan, K.E.1
Reddy, A.B.M.2
Dietzmann, K.3
Suriano, A.R.4
Kocieda, V.P.5
Stewart, M.6
Bhatia, M.7
-
43
-
-
0029052418
-
Transcriptional repression of the c-fos gene by YY1 is mediated by a direct interaction with ATF/CREB
-
Zhou Q, Gedrich RW, Engel DA. Transcriptional repression of the c-fos gene by YY1 is mediated by a direct interaction with ATF/CREB. J Virol 1995; 69: 4323-4330.
-
(1995)
J Virol
, vol.69
, pp. 4323-4330
-
-
Zhou, Q.1
Gedrich, R.W.2
Engel, D.A.3
-
44
-
-
0033773179
-
Mechanisms of transcriptional activation of cAMP-responsive element-binding protein CREB
-
Haus-Seuffert P, Meisterernst M. Mechanisms of transcriptional activation of cAMP-responsive element-binding protein CREB. Mol Cell Biochem 2000; 212: 5-9.
-
(2000)
Mol Cell Biochem
, vol.212
, pp. 5-9
-
-
Haus-Seuffert, P.1
Meisterernst, M.2
-
45
-
-
0037507270
-
Acetylation of cAMP-responsive element-binding protein (CREB) by CREB-binding protein enhances CREB-dependent transcription
-
DOI 10.1074/jbc.M300546200
-
Lu Q, Hutchins AE, Doyle CM, Lundblad JR, Kwok RP. Acetylation of cAMP-responsive element-binding protein (CREB) by CREB-binding protein enhances CREB-dependent transcription. J Biol Chem 2003; 278: 15727-15734. (Pubitemid 36799684)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.18
, pp. 15727-15734
-
-
Lu, Q.1
Hutchins, A.E.2
Doyle, C.M.3
Lundblad, J.R.4
Kwok, R.P.S.5
-
46
-
-
33750981250
-
Binding of YY1 to the proximal region of the murine beta interferon promoter is essential to allow CBP recruitment and K8H4/K14H3 acetylation on the promoter region after virus infection
-
DOI 10.1128/MCB.00420-06
-
Mokrani H, Sharafel Dein O, Mansuroglu Z, Bonnefoy E. Binding of YY1 to the proximal region of the murine beta interferon promoter is essential to allow CBP recruitment and K8H4/K14H3 acetylation on the promoter region after virus infection. Mol Cell Biol 2006; 26: 8551-8561. (Pubitemid 44748587)
-
(2006)
Molecular and Cellular Biology
, vol.26
, Issue.22
, pp. 8551-8561
-
-
Mokrani, H.1
Sharaf El Dein, O.2
Mansuroglu, Z.3
Bonnefoy, E.4
-
47
-
-
0035957953
-
CREB-binding protein and p300 in transcriptional regulation
-
Vo N Goodman RH. CREB-binding protein and p300 in transcriptional regulation. J Biol Chem 2001; 276: 13505-13508.
-
(2001)
J Biol Chem
, vol.276
, pp. 13505-13508
-
-
Vo, N.1
Goodman, R.H.2
-
48
-
-
0024380087
-
Rapid detection of octamer binding proteins with 'mini-extracts', prepared from a small number of cells
-
Schreiber E, Matthias P, Muller MM, Schaffner W. Rapid detection of octamer binding proteins with 'ini-extracts' prepared from a small number of cells. Nucleic Acids Res 1989; 17: 6419. (Pubitemid 19198635)
-
(1989)
Nucleic Acids Research
, vol.17
, Issue.15
, pp. 6419
-
-
Schreiber, E.1
Matthias, P.2
Muller, M.M.3
Schaffner, W.4
-
49
-
-
0032516519
-
Complex NF-κB interactions at the distal tumor necrosis factor promoter region in human monocytes
-
DOI 10.1074/jbc.273.33.21178
-
Udalova IA, Knight JC, Vidal V, Nedospasov SA, Kwiatkowski D. Complex NF-kappaB interactions at the distal tumor necrosis factor promoter region in human monocytes. J Biol Chem 1998; 273: 21178-21186. (Pubitemid 28385407)
-
(1998)
Journal of Biological Chemistry
, vol.273
, Issue.33
, pp. 21178-21186
-
-
Udalova, I.A.1
Knight, J.C.2
Vidal, V.3
Nedospasov, S.A.4
Kwiatkowski, D.5
-
50
-
-
3042569525
-
Complete MHC haplotype sequencing for common disease gene mapping
-
DOI 10.1101/gr.2188104
-
Stewart CA, Horton R, Allcock RJ, Ashurst JL, Atrazhev AM, Coggill P et al. Complete MHC haplotype sequencing for common disease gene mapping. Genome Res 2004; 14: 1176-1187. (Pubitemid 38811554)
-
(2004)
Genome Research
, vol.14
, Issue.6
, pp. 1176-1187
-
-
Stewart, C.A.1
Horton, R.2
Allock, R.J.N.3
Ashurst, J.L.4
Atrazhev, A.M.5
Coggill, P.6
Dunham, I.7
Forbes, S.8
Halls, K.9
Howson, J.M.M.10
Humphray, S.J.11
Hunt, S.12
Mungall, A.J.13
Osoegawa, K.14
Palmer, S.15
Roberts, A.N.16
Rogers, J.17
Sims, S.18
Wang, Y.19
Wilming, L.G.20
Elliot, J.F.21
De Jong, P.J.22
Sawcer, S.23
Todd, J.A.24
Trowsdale, J.25
Beck, S.26
more..
-
51
-
-
33744475085
-
A regulatory SNP causes a human genetic disease by creating a new transcriptional promoter
-
DOI 10.1126/science.1126431
-
De Gobbi M, Viprakasit V, Hughes JR, Fisher C, Buckle VJ, Ayyub H et al. A regulatory SNP causes a human genetic disease by creating a new transcriptional promoter. Science 2006; 312: 1215-1217. (Pubitemid 43801147)
-
(2006)
Science
, vol.312
, Issue.5777
, pp. 1215-1217
-
-
De Gobbi, M.1
Viprakasit, V.2
Hughes, J.R.3
Fisher, C.4
Buckle, V.J.5
Ayyub, H.6
Gibbons, R.J.7
Vernimmen, D.8
Yoshinaga, Y.9
De Jong, P.10
Cheng, J.-F.11
Rubin, E.M.12
Wood, W.G.13
Bowden, D.14
Higgs, D.R.15
-
52
-
-
34250369627
-
FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin
-
DOI 10.1101/gr.5533506
-
Giresi PG, Kim J, McDaniell RM, Iyer VR, Lieb JD. FAIRE (formaldehyde-assisted isolation of regulatory elements) isolates active regulatory elements from human chromatin. Genome Res 2007; 17: 877-885. (Pubitemid 46919722)
-
(2007)
Genome Research
, vol.17
, Issue.6
, pp. 877-885
-
-
Giresi, P.G.1
Kim, J.2
McDaniell, R.M.3
Iyer, V.R.4
Lieb, J.D.5
-
53
-
-
36448991500
-
Clustal W and Clustal X version 2. 0
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H et al. Clustal W and Clustal X version 2. 0. Bioinformatics 2007; 23: 2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
-
54
-
-
22344457014
-
EnoLOGOS: A versatile web tool for energy normalized sequence logos
-
DOI 10.1093/nar/gki439
-
Workman CT, Yin Y, Corcoran DL, Ideker T, Stormo GD, Benos PV. enoLOGOS: a versatile web tool for energy normalized sequence logos. Nucleic Acids Res 2005; 33: W389-W392. (Pubitemid 44529949)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.WEB. SERV. ISS.
-
-
Workman, C.T.1
Yin, Y.2
Corcoran, D.L.3
Ideker, T.4
Stormo, G.D.5
Benos, P.6
|