메뉴 건너뛰기




Volumn 32, Issue WEB SERVER ISS., 2004, Pages

ConSite: Web-based prediction of regulatory elements using cross-species comparison

Author keywords

[No Author keywords available]

Indexed keywords

DNA; TRANSCRIPTION FACTOR;

EID: 3242891274     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkh372     Document Type: Article
Times cited : (367)

References (18)
  • 2
    • 0034756824 scopus 로고    scopus 로고
    • Comparative genomics of the SOX9 region in human and Fugu rubripes: Conservation of short regulatory sequence elements within large intergenic regions
    • Bagheri-Fam,S., Ferraz,C., Demaille,J., Scherer,G. and Pfeifer,D. (2001) Comparative genomics of the SOX9 region in human and Fugu rubripes: conservation of short regulatory sequence elements within large intergenic regions. Genomics, 78, 73-82.
    • (2001) Genomics , vol.78 , pp. 73-82
    • Bagheri-Fam, S.1    Ferraz, C.2    Demaille, J.3    Scherer, G.4    Pfeifer, D.5
  • 3
    • 0027527487 scopus 로고
    • Regulation of the human cardiac/slow-twitch troponin C gene by multiple, cooperative, cell-type-specific, and MyoD-responsive elements
    • Christensen,T.H., Prentice,H., Gahlmann,R. and Kedes,L. (1993) Regulation of the human cardiac/slow-twitch troponin C gene by multiple, cooperative, cell-type-specific, and MyoD-responsive elements. Mol. Cell Biol., 13, 6752-6765.
    • (1993) Mol. Cell Biol. , vol.13 , pp. 6752-6765
    • Christensen, T.H.1    Prentice, H.2    Gahlmann, R.3    Kedes, L.4
  • 5
    • 0038631908 scopus 로고    scopus 로고
    • In silico identification of metazoan transcriptional regulatory regions
    • Wasserman,W.W. and Krivan,W. (2003) In silico identification of metazoan transcriptional regulatory regions. Naturwissenschaften, 90, 156-166.
    • (2003) Naturwissenschaften , vol.90 , pp. 156-166
    • Wasserman, W.W.1    Krivan, W.2
  • 6
    • 0034072450 scopus 로고    scopus 로고
    • DNA binding sites: Representation and discovery
    • Stormo,G.D. (2000) DNA binding sites: representation and discovery. Bioinformatics, 16, 16-23.
    • (2000) Bioinformatics , vol.16 , pp. 16-23
    • Stormo, G.D.1
  • 7
    • 0031581855 scopus 로고    scopus 로고
    • Analysis of the distribution of binding sites for a tissue-specific transcription factor in the vertebrate genome
    • Tronche,F., Ringeisen,F., Blumenfeld,M., Yaniv,M. and Pontoglio,M. (1997) Analysis of the distribution of binding sites for a tissue-specific transcription factor in the vertebrate genome. J. Mol. Biol., 266, 231-245.
    • (1997) J. Mol. Biol. , vol.266 , pp. 231-245
    • Tronche, F.1    Ringeisen, F.2    Blumenfeld, M.3    Yaniv, M.4    Pontoglio, M.5
  • 8
    • 0029655429 scopus 로고    scopus 로고
    • Quantitative discrimination of MEF2 sites
    • Fickett,J.W. (1996) Quantitative discrimination of MEF2 sites. Mol. Cell Biol., 16, 437-441.
    • (1996) Mol. Cell Biol. , vol.16 , pp. 437-441
    • Fickett, J.W.1
  • 9
    • 0023821768 scopus 로고
    • Embryonic epsilon and gamma globin genes of a prosimian primate (Galago crassicaudatus). Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints
    • Tagle,D.A., Koop,B.F., Goodman,M., Slightom,J.L., Hess,D.L. and Jones,R.T. (1988) Embryonic epsilon and gamma globin genes of a prosimian primate (Galago crassicaudatus). Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints. J. Mol. Biol., 203, 439-455.
    • (1988) J. Mol. Biol. , vol.203 , pp. 439-455
    • Tagle, D.A.1    Koop, B.F.2    Goodman, M.3    Slightom, J.L.4    Hess, D.L.5    Jones, R.T.6
  • 14
    • 0035207865 scopus 로고    scopus 로고
    • GeneLynx: A gene-centric portal to the human genome
    • Lenhard,B., Hayes,W.S. and Wasserman,W.W. (2001) GeneLynx: a gene-centric portal to the human genome. Genome Res., 11, 2151-2157.
    • (2001) Genome Res. , vol.11 , pp. 2151-2157
    • Lenhard, B.1    Hayes, W.S.2    Wasserman, W.W.3
  • 16
    • 0036677662 scopus 로고    scopus 로고
    • TFBS: Computational framework for transcription factor binding site analysis
    • Lenhard,B. and Wasserman,W.W. (2002) TFBS: Computational framework for transcription factor binding site analysis. Bioinformatics, 18, 1135-1136.
    • (2002) Bioinformatics , vol.18 , pp. 1135-1136
    • Lenhard, B.1    Wasserman, W.W.2
  • 17
    • 0003409775 scopus 로고    scopus 로고
    • TESS: Transcription Element Search Software on the WWW (report CBIL-TR-1997-1001-v0.0)
    • Computational Biology and Informatics Laboratory, School of Medicine, University of Pennsylvania
    • Schug,J. and Overton,G.C. (1997) TESS: Transcription Element Search Software on the WWW (report CBIL-TR-1997-1001-v0.0). Computational Biology and Informatics Laboratory, School of Medicine, University of Pennsylvania.
    • (1997)
    • Schug, J.1    Overton, G.C.2
  • 18
    • 0036105591 scopus 로고    scopus 로고
    • rVista for comparative sequence-based discovery of functional transcription factor binding sites
    • Loots,G.G., Ovcharenko,I., Pachter,L., Dubchak,I. and Rubin,E.M. (2002) rVista for comparative sequence-based discovery of functional transcription factor binding sites. Genome Res., 12, 832-839.
    • (2002) Genome Res. , vol.12 , pp. 832-839
    • Loots, G.G.1    Ovcharenko, I.2    Pachter, L.3    Dubchak, I.4    Rubin, E.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.