Optimizing the indirect extraction of prokaryotic DNA from soils

Soil Biology and Biochemistry

Volumn 43, Issue 4, 2011, Pages 736-748

  Williamson, Kurt E ^a,d   Kan, Jinjun ^b   Polson, Shawn W ^c   Williamson, Shannon J ^d  

^a The College of William and Mary   (United States)

^b UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

^c UNIVERSITY OF DELAWARE   (United States)

^d J CRAIG VENTER INSTITUTE   (United States)

Author keywords

Clone libraries; DGGE; DNA; Extraction; Prokaryotes; RAPD PCR; Soil

Indexed keywords

16S RRNA GENE; AGAROSE; BANDING PATTERNS; CELL LYSIS; CELL YIELDS; CLONE LIBRARY; COMMUNITY COMPOSITION; DGGE; DNA EXTRACTION; DNA ISOLATION; ENZYMATIC DIGESTIONS; EXTRACTION PROCEDURE; HIGH MOLECULAR WEIGHT; HIGH-THROUGHPUT; METAGENOMIC LIBRARY CONSTRUCTION; PROKARYOTES; PROKARYOTIC CELLS; PROTEINASE K; RAPD-PCR; SAMPLE POPULATION; SODIUM DEOXYCHOLATE; SOIL AGGREGATE; SOIL SAMPLE; SOIL TYPES; WHOLE-GENOME SHOTGUN;

BLENDING; CENTRIFUGATION; CLONE CELLS; CLONING; DNA; GENE ENCODING; LIBRARIES; MICROORGANISMS; NUCLEIC ACIDS; POPULATION DISTRIBUTION; POTASSIUM; RNA; SODIUM; SOILS;

POLYMERASE CHAIN REACTION;

CLONE; COMMUNITY COMPOSITION; COMPARATIVE STUDY; DIGESTION; ELECTROKINESIS; ENZYME ACTIVITY; GENOME; OPTIMIZATION; POLYMERASE CHAIN REACTION; PROKARYOTE; SOIL AGGREGATE; SOIL BIOTA; SOIL TYPE;

PROKARYOTA;

EID: 79951677685     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.soilbio.2010.04.017     Document Type: Article

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