Physical, chemical and microbiological properties of an Andisol as related to land use and tillage practice

Soil and Tillage Research

Volumn 101, Issue 1-2, 2008, Pages 10-19

  Rahman, M Hasinur ^a   Okubo, A ^b   Sugiyama, S ^b   Mayland, H F ^c  

^a National University   (Bangladesh)

^b HIROSAKI UNIVERSITY   (Japan)

^c AGRICULTURAL RESEARCH SERVICE   (United States)

Author keywords

Andisol; Denaturing gradient gel electrophoresis (DGGE) of PCR amplified genes; Phospholipid fatty acid (PLFA)

Indexed keywords

AGRICULTURAL MACHINERY; AGRICULTURE; AMPLIFICATION; BACTERIOLOGY; CALCIUM; CHEMICAL PROPERTIES; COPPER; ENVIRONMENTAL IMPACT; FATTY ACIDS; HYDRAULIC CONDUCTIVITY; INFORMATION MANAGEMENT; LAND USE; LIQUID PHASE EPITAXY; MANGANESE; MANGANESE COMPOUNDS; METHANE; NUCLEIC ACIDS; ORGANIC ACIDS; ORGANIC COMPOUNDS; PHOSPHOLIPIDS; SODIUM; SOILS; SULFATE MINERALS; WINDOWS OPERATING SYSTEM; ZINC;

16S RDNA; ANDISOL; APPLE ORCHARDS; BULK DENSITIES; C/N RATIO; CHEMICAL-; CONVENTIONAL TILLAGE; DENATURING GRADIENT GEL ELECTROPHORESIS (DGGE) OF PCR-AMPLIFIED GENES; DGGE ANALYSIS; FUNGAL DIVERSITY; LIQUID-PHASE; MANAGEMENT PRACTICES; MICROBIAL COMMUNITIES; NO-TILLAGE; ORGANIC MATTER; OXIDIZING BACTERIA; PCR AMPLIFICATION; PENETRATION RESISTANCE; PHOSPHOLIPID FATTY ACID; PHOSPHOLIPID FATTY ACID (PLFA); SATURATED HYDRAULIC CONDUCTIVITY; SOIL CHARACTERISTICS; SOIL MICROBIAL COMMUNITIES; SOLID-PHASE; SULFATE-REDUCING BACTERIA; SURFACE SOILING; TILLAGE PRACTICES;

ELECTRIC INSTRUMENT TRANSFORMERS;

ANDISOL; CROP ROTATION; LAND USE; PHOSPHOLIPID; SOIL MANAGEMENT; SOIL MICROORGANISM; SOIL PROPERTY; SUSTAINABILITY; ZERO TILLAGE;

ASIA; EURASIA; FAR EAST; JAPAN;

BACTERIA (MICROORGANISMS); CYANOBACTERIA; FUNGI; GLYCINE MAX; MALUS X DOMESTICA; TRITICUM AESTIVUM;

EID: 50849093199     PISSN: 01671987     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.still.2008.05.006     Document Type: Article

References (82)

1. Allmaras R.R., Rickman R.W., Ekin L.G., and Kimball B.A. Chiseling influences on soil hydraulic properties. Soil Sci. Soc. Am. J. 41 (1977) 796-803
2. Atlas R.M., and Bartha R. Microbial Ecology: Fundamentals and Applications (1998), Benjamin/Cummings, Redwood City, CA 694 pp
3. Azooz R.H., and Arshad M.A. Soil infiltration and hydraulic conductivity under long-term no-tillage and conventional tillage systems. Can. J. Soil Sci. 76 (1996) 143-152
4. Balesdent J., Chenu C., and Balabane M. Relationship of soil organic matter dynamics to physical protection and tillage. Soil Till. Res. 53 (2000) 215-230
5. Benjamin J.G. Tillage effects on near-surface soil hydraulic properties. Soil Till. Res. 26 (1993) 277-288
6. Bhattacharyya R., Prakash V., Kundu S., and Gupta H.S. Effect of tillage and crop rotations on pore size distribution and soil hydraulic conductivity in sandy clay loam soil of the Indian Himalayas. Soil Till. Res. 86 (2006) 129-140
7. Blake G.R., and Hartge K.H. Bulk density. In: Klute A. (Ed). Methods of Soil Analysis. Part 1. Physical and Mineralogical Methods (1986), Am. Soc. Agron., Madison, WI 363-375
8. Blake G.R., and Hartge K.H. Particle density. In: Klute A. (Ed). Methods of Soil Analysis. Part 1. Physical and Mineralogical Methods (1986), Am. Soc. Agron., Madison, WI 377-382
9. Blevins R.L., Thomas G.W., Smith M.S., Frye W.W., and Cornelius P.L. Changes in soil properties after 10 years continuous no-tilled and conventionally tilled corn. Soil Till. Res. 3 (1983) 135-146
10. Dalal R.C. Long-term trends in total nitrogen of a Vertisol subjected in zero-tillage, nitrogen application and stubble retention. Aust. J. Soil Res. 30 (1992) 223-231
11. Dao T.H. Tillage system and crop residue effects on surface compaction of a Paleustill. Agron. J. 88 (1996) 141-148
12. Datiri B.C., and Lowery B. Effects of conservation tillage on hydraulic properties of a Griswold silt loam soil. Soil Till. Res. 21 (1991) 257-271
13. Doran, J.W., Parkin, T.B., 1994. Defining and assessing soil quality. In: Doran, J.W., et al. (Eds.), Defining Soil Quality for a Sustainable Environment. Soil Sci. Soc. Am., Spec. Publ. 35. Am. Soc. Am., Madison, WI, pp. 3-21.
14. Ehlers W. Measurement and calculation of hydraulic conductivity in horizons of tilled and untilled loess-derived soil, Germany. Geoderma 19 (1977) 293-306
15. Erani P.R., Bayer C., and Maestri L. Corn yield as affected by liming and tillage system on an Acid Brazilian Oxisol. Agron. J. 94 (2002) 305-309
16. Etana A., Hakansson I., Zagal E., and Bucas S. Effect of tillage depth on organic carbon content and physical properties in five Swedish soils. Soil Till. Res. 52 (1999) 129-139
17. Franzluebbers A.J., Langdale G.W., and Schomberg H.H. Soil carbon, nitrogen and aggregation in response to type and frequency of tillage. Soil Sci. Soc. Am. J. 63 (1999) 349-355
18. Franzluebbers A.J., and Hons F.M. Soil-profile distribution of primary and secondary plant available nutrients under conventional and no tillage. Soil Till. Res. 39 (1996) 229-239
19. Frenzel P. Plant associated methane oxidation in rice fields and wetlands. In: Schink B. (Ed). Advances in Microbial Ecology vol. 16 (2000), Springer, New York 85-114
20. Frostegård A., Tunlid A., and Bååth E. Phospholipid fatty acid composition, biomass and activity of microbial communities from two soil types experimentally exposed to different heavy metals. Appl. Environ. Microb. 59 (1993) 3605-3617
21. Fründ C., and Cohen Y. Diurnal cycles of sulfate reduction under oxic conditions in cyanobacterial mats. Appl. Environ. Microb. 58 (1992) 70-77
22. Galantini J.A., Landriscini M.R., Iglesias J.O., Miglierina A.M., and Rossell R.A. The effects of crop rotation and fertilization on wheat productivity in the Pampean semi-arid region of Argentina. 2. Nutrient balance, yield and grain quality. Soil Till. Res. 53 (2000) 137-144
23. Gantzer C.J., and Blake G.H. Physical characteristics of Le Sueur clay loam soil following non-till and conventional tillage. Agron. J. 70 (1978) 853-857
24. Gardner W.H. Water content. In: Klute A. (Ed). Methods of Soil Analysis. Part. Physical and Mineralogical Methods. 2nd edition (1986), Am. Soc. Agron., Madison, WI 493-541
25. Gupta J.P., and Kathavate Y.V. Effects of soil compaction and water regimes on oxygen diffusion, nutrient uptake and yield of rice. Riso 21 (1972) 191-200
26. Gupta S.K., and Gupta I.C. Management of Saline Soils and Water (1987), Oxford and IBH Publishing Company Pvt. Ltd., New Delhi
27. Hanson R.S., and Hanson T.E. Methanotropic bacteria. Microbiol. Rev. 60 (1996) 439-471
28. Heard J.R., Kladivko E.J., and Mannering J.V. Soil macroporosity, hydraulic conductivity and air permeability of silty soils under long-term conservation tillage in Indiana. Soil Till. Res. 11 (1988) 1-18
29. Heenan D.P., McGhie W.J., Thomson F.M., and Chan K.Y. Decline in soil organic carbon and nitrogen in relation to tillage, stubble management and rotation. Aust. J. Exp. Agric. 35 (1995) 877-884
30. Hill R.L., and Cruse R.M. Tillage effects on bulk density and soil strength of two Mollisols. Soil Sci. Soc. Am. J. 49 (1985) 1270-1275
31. Hill G.T., Mitkowski N.A., Aldrich-Wolfe L., Emele L.R., Jurkonie D.D., Ficke A., Maldonado-Ramirez S., Lunch S.T., and Nelson E.B. Methods for assessing the composition and diversity of soil microbial communities. Appl. Soil Ecol. 15 (2000) 25-36
32. IPCC. Climate Change 2001: The Scientific Basis. Contribution of the Working Group I to the Third Assessment Report of the Intergovernmental Panel on Climate Change (2001), Cambridge University Press, Cambridge p. 881
33. Ishaq M., Ibrahim M., and Lal R. Tillage effects on soil properties at different levels of fertilizer application in Punjab, Pakistan. Soil Till. Res. 68 (2002) 93-99
34. Jackson M.L. Soil Chemical Analysis (1973), Prentice Hall of India Pvt. Ltd., India
35. Kalra, Y.P., Maynard, D.G., 1994a. Particle-size analysis. Methods Manual for Forest Soil and Plant Analysis. Canadian Forest Service, Edmonton, Alberta, Canada. Information Report NOR-X-319, pp. 42-53.
36. Kalra, Y.P., Maynard, D.G., 1994b. Electrical conductivity and soluble salts. Methods Manual for Forest of Soil and Plant Analysis. Canadian Forest Service, Edmonton, Alberta, Canada. Information Report NOR-X-319, pp. 35-41.
37. Karlen D.L., Mausbach M.J., Doran J.W., Cline R.G., Harris R.F., and Schuman G.E. Soil quality: a concept, definition, and framework for evaluation. Soil Sci. Soc. Am. J. 61 (1997) 4-10
38. Karlen D.L., Wollenhaupt N.C., Erbach D.C., Bery E.C., Swan J.B., Eash N.S., and Jordahl J.L. Long-term tillage effects on soil quality. Soil Till. Res. 32 (1994) 313-327
39. Kezdi A. Handbook of Soil Mechanics: Soil Physics, vol. I (1974), Elsevier Scientific Publishing Company, Amsterdam, The Netherlands
40. Klute, A., Dirksen, C., 1986. Hydraulic conductivity and diffusivity: laboratory methods. In: Klute, A. (Ed.), Methods of Soil Analysis, Part 1, 2nd edition, Monograph No. 9. ASA, Madison, WI, pp. 687-734.
41. Kourtev P.S., Ehrenfeld J.G., and Häggblom M. Experimental analysis of the effect of exotic and native plant species on the structure and function of soil microbial communities. Soil Biol. Biochem. 35 (2003) 895-905
42. Kribaa M., Hallaire V., Curmi P., and Lahmar R. Effect of various cultivation methods on the structure and hydraulic properties of a soil in semi-arid climate. Soil Till. Res. 60 (2001) 43-53
43. Lal R. No-tillage effects on soil properties under different crops in Nigeria. Soil Sci. Soc. Am. J. 40 (1976) 762-768
44. Lal R. Effects of 6 years of continuous no-tillage or puddling systems on soil physical properties and rice (Oryza sativa) of a loamy soil. Soil Till. Res. 8 (1986) 181-200
45. Lal R. Tillage effects on soil degradation, soil resilience, soil quality and sustainability. Soil Till. Res. 27 (1993) 1-8
46. LeMer J., and Roger P. Production, oxidation, emission and consumption of methane by soils: a review. Eur. J. Soil Biol. 37 (2001) 25-50
47. Loch R.J., and Coughlan K.J. Effects of zero tillage and stubble retention on some properties of a cracking clay. Aust. J. Soil Res. 22 (1984) 91-98
48. Matowo P.R., Pierzynski G.M., Whitney D., and Lamond R.E. Soil chemical properties as influenced by tillage and nitrogen source, placement, and rates after 10 years of continuous sorghum. Soil Till. Res. 50 (1999) 11-19
49. Muyzer G., De Waal E.C., and Uitterlinden A.G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59 (1993) 695-700
50. Peixoton R.S., Coutinho H.L.C., Madari B., Machado P.L.O.A., Rumjanek N.G., Van Elsas J.D., Seldin L., and Rosado A.S. Soil aggregation and bacterial community structure as affected by tillage and cover cropping in the Brazilian Cerrados. Soil Till. Res. 2 (2005) 281-292
51. Ponnamperuma F.N. The chemistry of submerged soils. Adv. Agron. 24 (1972) 29-96
52. Porazinska D.L., Bardgett R.D., Blaauw M.B., Hunt W., Parsons A.N., Seastedt T.R., and Wall D.H. Relationships at the aboveground-belowground interface: plants, soil biota and soil processes. Ecol. Monogr. 73 (2003) 377-395
53. Powlson D.S., Hirsch P.R., and Brookes P.C. The role of soil microorganisms in soil organic matter conservation in the tropics. Nutr. Cycl. Agroecosyst. 61 (2001) 41-51
54. Powlson D.S., and Jenkinson D.S. A comparison of organic matter, biomass, adenosine triphosphate and mineralizable nitrogen contents of ploughed and direct drilled soils. J. Agric. Sci. 97 (1981) 713-721
55. Prihar S.S. Impact of tillage on soil environment. Proceedings of International Symposium on Soil Physics-Application Under Stress Environments. BARD, PARC, Islamabad, Pakistan, January 22-26, 1989 (1990) 252-266
56. Prosser J.I. Molecular and functional diversity in soil microorganisms. Plant Soil 244 (2002) 9-17
57. Puget P., and Lal R. Soil organic carbon and nitrogen in a Mollisoil in central Ohio as affected by tillage and land use. Soil Till. Res. 80 (2005) 201-213
58. Rahman M.H., Khan T.H., Tanaka A., and Ito M. Properties of some selected soils in Northeast Honshu Island of Japan. Thai. J. Agric. Sci. 31 (1998) 31-46
59. Rahman M.H., Okobu A., and Sugiyama S. Microbial community in Andisol as related to land use and tillage. Jpn. J. Grassland Sci. 53 Suppl. (2007) 398-399
60. Rahman M.H., Tanaka A., and Hoque S. Long-term effects of tillage on physicochemical properties of modified Andisol of northeast Honshu Island. Commun. Soil Sci. Plant Anal. 34 (2003) 1743-1757
61. Rasmussen K.J. Impact of ploughless soil tillage on yield and soil quality: a Scandinavian review. Soil Till. Res. 53 (1999) 3-14
62. Rhoton F.E. Influence of time on soil response to till practices. Soil Sci. Soc. Am. J. 64 (2000) 700-709
63. Roseberg R.J., and McCoy E.L. Tillage and traffic changes in macroporosity and macropore continuity: an ability assessment. Soil Sci. Soc. Am. J. 56 (1992) 1261-1267
64. Rovira A.D., and Greacen E.I. The effect of aggregate disruption on the activity of microorganisms in the soils. Aust. J. Agric. Res. 8 (1957) 659-673
65. Salinas-Garcia J.R., Velázquez-Garcia J.J., Gallardo-Valdez M., Diaz-Mederos P., Caballero-Hernandéz F., tapia-Vargas L.M., and Rosales-Robles E. Tillage effects on microbial and nutrient distribution in soils under rain-fed corn production in central-western Mexico. Soil Till. Res. 66 (2002) 143-152
66. Sharma P.P., and De Datta S.K. Effects of puddling on soil physical properties and processes. Soil Physics and Rice (1985), IRRI, Los Banos, Philippines pp. 217-234
67. Sharratt B., Zhang M., and Sparrow S. Twenty years of conservation tillage research in subartic Alaska. II. Impact on soil hydraulic properties. Soil Till. Res. 91 (2006) 82-88
68. Shukla M.K., Lal R., and Ebinger M. Determining soil quality indicators by factor analysis. Soil Till. Res. 87 (2006) 194-204
69. Sys C. Evaluation of the physical environment for rice cultivation. Soil Physics and Rice (1985), IRRI, Los Banõs, Philippines pp. 31-43
70. Thomas G.W. The relationship between organic matter content and exchangeable aluminium in acid soil. Soil Sci. Soc. Am. Proc. 39 (1975) 591-598
71. Thomas G.W. Exchangeable cations. In: Page A.L. (Ed). Methods of Soil Analysis, Part 2, Chemical and Microbiological Methods. 2nd ed. (1982), Am. Soc. Agron., Madison, WI pp. 159-165
72. Thomas G.A., Dalal R.C., and Standley J. No-till effects on organic matter, pH, cation exchange capacity and nutrient distribution in a Luvisol in semi-arid subtropics. Soil Till. Res. 94 (2006) 295-304
73. Turpin K.M., Lapen D.R., Robin M.J.L., Topp E., Edwards M., Curnoe W.E., Topp G.C., Mclaughlin N.B., Ball Coelho B., and Payne M. Slurry-application implement tine modification of soil hydraulic properties under different soil water content conditions for silty-clay loam soils. Soil Till. Res. 95 (2007) 120-132
74. US Salinity Laboratory Staff, 1954. Diagnosis and improvement of saline and alkali soils. In: Richards, L.A. (Ed.), Agricultural Handbook No. 60, USDA, U.S. Govt. Printing Office, Washington, D.C., 1954, pp. 154-156.
75. Vainio E.J., and Hantula J. Direct analysis of wood-inhabiting fungi using denaturing gradient gel electrophoresis of amplified ribosomal DNA. Mycol. Res. 104 (2000) 927-936
76. Varsa E.C., Chong S.K., Abolaji J.O., Farquhar D.A., and Olsen F.J. Effect of deep tillage on soil physical characteristics and corn (Zea mays L.) root growth and production. Soil Till. Res. 43 (1997) 221-230
77. White T.J., Bruns T., Lee S., and Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phyologenetics. In: Innes M.A., Gelfand D.H., Sninsky J.J., and White T.J. (Eds). PCR Protocols: A Guide to Methods and Applications (1990), Academic Press, San Diego, CA, USA 315-322
78. White D.C., Pinkart H.C., and Ringelberg D.B. Biomass measurements: biochemical approaches. In: Hurst C.J. (Ed). Manual of Environmental Microbiology (1996), ASM Press, Washington, D.C. 91-101
79. Widmer F., Fließbach A., Laczkó E., Schulze-Aurich J., and Zeyer J. Assessing soil biological characteristics: a comparison of bulk soil community DNA-, PLFA-, and Biolog™-analyses. Soil Biol. Bichem. 33 (2001) 1029-1036
80. Yao H., Bowman D., and Shi W. Soil microbial community structure and diversity in a turfgrass chronosequence: land-use change versus turfgrass management. Appl. Soil Ecol. 34 (2006) 209-218
81. Zak D.R., Holmes W.E., White D.C., Peacock A.D., and Tilman D. Plant diversity, soil microbial communities, and ecosystem function: Are there any links?. Ecology 84 (2003) 2042-2050
82. Zogg G.P., Zak D.R., Ringleberg D.B., MacDonald N.W., Pregitzer K.S., and White D.C. Compositional and functional shifts in microbial communities due to soil warming. Soil Sci. Soc. Am. J. 61 (1997) 475-481