-
1
-
-
0014663102
-
Factor stimulating transcription by RNA polymerase
-
Burgess, R.R., Travers, A.A., Dunn, J.J. and Bautz, E.K. (1969) Factor stimulating transcription by RNA polymerase. Nature, 221, 43-46.
-
(1969)
Nature
, vol.221
, pp. 43-46
-
-
Burgess, R.R.1
Travers, A.A.2
Dunn, J.J.3
Bautz, E.K.4
-
2
-
-
0028333908
-
A promoter melting region in the primary sigma factor of Bacillus subtilis Identification of functionally important aromatic amino acids
-
Juang, Y.L. and Helmann, J.D. (1994) A promoter melting region in the primary sigma factor of Bacillus subtilis. Identification of functionally important aromatic amino acids. J. Mol. Biol., 235, 1470-1488.
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 1470-1488
-
-
Juang, Y.L.1
Helmann, J.D.2
-
3
-
-
0034705333
-
Aromatic amino acids in region 2.3 of Escherichia coli sigma 70 participate collectively in the formation of an RNA polymerase-promoter open complex
-
Panaghie, G., Aiyar, S.E., Bobb, K.L., Hayward, R.S. and de Haseth, P.L. (2000) Aromatic amino acids in region 2.3 of Escherichia coli sigma 70 participate collectively in the formation of an RNA polymerase-promoter open complex. J. Mol. Biol., 299, 1217-1230.
-
(2000)
J. Mol. Biol.
, vol.299
, pp. 1217-1230
-
-
Panaghie, G.1
Aiyar, S.E.2
Bobb, K.L.3
Hayward, R.S.4
De Haseth, P.L.5
-
4
-
-
0028106101
-
Genetic and physiological studies of Bacillus subtilis σ(A) mutants defective in promoter melting
-
Rong, J.C. and Helmann, J.D. (1994) Genetic and physiological studies of Bacillus subtilis sigma A mutants defective in promoter melting. J. Bacteriol., 176, 5218-5224. (Pubitemid 24273506)
-
(1994)
Journal of Bacteriology
, vol.176
, Issue.17
, pp. 5218-5224
-
-
Rong, J.C.1
Helmann, J.D.2
-
5
-
-
0035943648
-
Different roles for basic and aromatic amino acids in conserved region 2 of Escherichia coli sigma(70) in the nucleation and maintenance of the single-stranded DNA bubble in open RNA polymerase-promoter complexes
-
Tomsic, M., Tsujikawa, L., Panaghie, G., Wang, Y., Azok, J. and deHaseth, P.L. (2001) Different roles for basic and aromatic amino acids in conserved region 2 of Escherichia coli sigma(70) in the nucleation and maintenance of the single-stranded DNA bubble in open RNA polymerase-promoter complexes. J. Biol. Chem., 276, 31891-31896.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 31891-31896
-
-
Tomsic, M.1
Tsujikawa, L.2
Panaghie, G.3
Wang, Y.4
Azok, J.5
Dehaseth, P.L.6
-
6
-
-
0034161515
-
Escherichia coli promoter opening and -10 recognition: Mutational analysis of σ70
-
Fenton, M.S., Lee, S.J. and Gralla, J.D. (2000) Escherichia coli promoter opening and -10 recognition: mutational analysis of sigma 70. EMBO J., 19, 1130-1137. (Pubitemid 30119837)
-
(2000)
EMBO Journal
, vol.19
, Issue.5
, pp. 1130-1137
-
-
Fenton, M.S.1
Lee, S.J.2
Gralla, J.D.3
-
7
-
-
0242692671
-
Multiple Sigma Subunits and the Partitioning of Bacterial Transcription Space
-
DOI 10.1146/annurev.micro.57.030502.090913
-
Gruber, T.M. and Gross, C.A. (2003) Multiple sigma subunits and the partitioning of bacterial transcription space. Annu. Rev. Microbiol., 57, 441-466. (Pubitemid 37392951)
-
(2003)
Annual Review of Microbiology
, vol.57
, pp. 441-466
-
-
Gruber, T.M.1
Gross, C.A.2
-
8
-
-
0023918675
-
Structure and function of bacterial sigma factors
-
Helmann, J.D. and Chamberlin, M.J. (1988) Structure and function of bacterial sigma factors. Annu. Rev. Biochem., 57, 839-872.
-
(1988)
Annu. Rev. Biochem.
, vol.57
, pp. 839-872
-
-
Helmann, J.D.1
Chamberlin, M.J.2
-
9
-
-
0028018104
-
Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase σ factors involved in the regulation of extracytoplasmic functions
-
DOI 10.1073/pnas.91.16.7573
-
Lonetto, MA., Brown, K.L., Rudd, K.E. and Buttner, M.J. (1994) Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase sigma factors involved in the regulation of extracytoplasmic functions. Proc. Natl Acad. Sci. USA, 91, 7573-7577. (Pubitemid 24238227)
-
(1994)
Proceedings of the National Academy of Sciences of the United States of America
, vol.91
, Issue.16
, pp. 7573-7577
-
-
Lonetto, M.A.1
Brown, K.L.2
Rudd, K.E.3
Buttner, M.J.4
-
10
-
-
0024355282
-
70 subunit of RNA polymerase with altered promoter specificity
-
DOI 10.1016/0022-2836(89)90567-6
-
Gardella, T., Moyle, H. and Susskind, M.M. (1989) A mutant Escherichia coli sigma 70 subunit of RNA polymerase with altered promoter specificity. J. Mol. Biol., 206, 579-590. (Pubitemid 19137414)
-
(1989)
Journal of Molecular Biology
, vol.206
, Issue.4
, pp. 579-590
-
-
Gardella, T.1
Moyle, H.2
Susskind, M.M.3
-
12
-
-
0023644795
-
Constitutive function of a positively regulated promoter reveals new sequences essential for activity
-
Keilty, S. and Rosenberg, M. (1987) Constitutive function of a positively regulated promoter reveals new sequences essential for activity. J. Biol. Chem., 262, 6389-6395.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 6389-6395
-
-
Keilty, S.1
Rosenberg, M.2
-
13
-
-
0030915128
-
Promoter recognition as measured by binding of polymerase to nontemplate strand oligonucleotide
-
DOI 10.1126/science.276.5316.1258
-
Marr, M.T. and Roberts, J.W. (1997) Promoter recognition as measured by binding of polymerase to nontemplate strand oligonucleotide. Science, 276, 1258-1260. (Pubitemid 27227364)
-
(1997)
Science
, vol.276
, Issue.5316
, pp. 1258-1260
-
-
Marr, M.T.1
Roberts, J.W.2
-
14
-
-
0024371540
-
70 subunit of Escherichia coli RNA polymerase
-
DOI 10.1016/0022-2836(89)90568-8
-
Siegele, DA., Hu, J.C, Walter, WA. and Gross, C.A. (1989) Altered promoter recognition by mutant forms of the sigma 70 subunit of Escherichia coli RNA polymerase. J. Mol. Biol., 206, 591-603. (Pubitemid 19137415)
-
(1989)
Journal of Molecular Biology
, vol.206
, Issue.4
, pp. 591-603
-
-
Siegele, D.A.1
Hu, J.C.2
Walter, W.A.3
Gross, C.A.4
-
15
-
-
0024391829
-
Mutation changing the specificity of an RNA polymerase sigma factor
-
DOI 10.1016/0022-2836(89)90569-X
-
Zuber, P., Healy, J., Carter, H.L. 3rd, Cutting, S., Moran, C.P. Jr and Losick, R. (1989) Mutation changing the specificity of an RNA polymerase sigma factor. J. Mol. Biol., 206, 605-614. (Pubitemid 19137416)
-
(1989)
Journal of Molecular Biology
, vol.206
, Issue.4
, pp. 605-614
-
-
Zuber, P.1
Healy, J.2
Carter III, H.L.3
Cutting, S.4
Moran Jr., C.P.5
Losick, R.6
-
16
-
-
0026688122
-
The interaction between Bacillus subtilis sigma-A (sigma A) factor and RNA polymerase with promoters
-
Chang, B.Y., Shyu, Y.T. and Doi, R.H. (1992) The interaction between Bacillus subtilis sigma-A (sigma A) factor and RNA polymerase with promoters. Biochimie, 74, 601-612.
-
(1992)
Biochimie
, vol.74
, pp. 601-612
-
-
Chang, B.Y.1
Shyu, Y.T.2
Doi, R.H.3
-
17
-
-
0028977969
-
The Bacillus subtilis flagellar regulatory protein sigma D: Overproduction domain analysis and DNA-binding properties
-
Chen, Y.F. and Helmann, J.D. (1995) The Bacillus subtilis flagellar regulatory protein sigma D: overproduction, domain analysis and DNA-binding properties. J. Mol. Biol., 249, 743-753.
-
(1995)
J. Mol. Biol.
, vol.249
, pp. 743-753
-
-
Chen, Y.F.1
Helmann, J.D.2
-
18
-
-
0019802891
-
Free σ factor of Escherichia coli RNA polymerase can bind to DNA
-
Kudo, T. and Doi, R.H. (1981) Free sigma factor of Escherichia coli RNA polymerase can bind to DNA. J. Biol. Chem., 256, 9778-9781. (Pubitemid 12176172)
-
(1981)
Journal of Biological Chemistry
, vol.256
, Issue.19
, pp. 9778-9781
-
-
Kudo, T.1
Doi, R.H.2
-
19
-
-
0019349557
-
Free sigma subunit of Bacillus subtilis RNA polymerase binds to DNA
-
DOI 10.1007/BF00339006
-
Kudo, T., Jaffe, D. and Doi, R.H. (1981) Free sigma subunit of Bacillus subtilis RNA polymerase binds to DNA. Mol. Gen. Genet., 181, 63-68. (Pubitemid 11189576)
-
(1981)
Molecular and General Genetics
, vol.181
, Issue.1
, pp. 63-68
-
-
Kudo, T.1
Jaffe, D.2
Doi, R.H.3
-
21
-
-
0025834180
-
Footprint of the sigma protein: A re-examination
-
Wellman, A. and Meares, C.F. (1991) Footprint of the sigma protein: a re-examination. Biochem. Biophys. Res. Commun., 177, 140-144.
-
(1991)
Biochem. Biophys. Res. Commun.
, vol.177
, pp. 140-144
-
-
Wellman, A.1
Meares, C.F.2
-
22
-
-
0027132539
-
Amino-terminal amino acids modulate σ-factor DNA-binding activity
-
Dombroski, A.J., Walter, WA. and Gross, C.A. (1993) Amino-terminal amino acids modulate sigma-factor DNA-binding activity. Genes Dev., 7, 2446-2455. (Pubitemid 24003246)
-
(1993)
Genes and Development
, vol.7
, Issue.A12
, pp. 2446-2455
-
-
Dombroski, A.J.1
Walter, W.A.2
Gross, C.A.3
-
23
-
-
0026755533
-
Polypeptides containing highly conserved regions of transcription initiation factor sigma 70 exhibit specificity of binding to promoter DNA
-
Dombroski, A.J., Walter, WA., Record, M.T. Jr, Siegele, DA. and Gross, C.A. (1992) Polypeptides containing highly conserved regions of transcription initiation factor sigma 70 exhibit specificity of binding to promoter DNA. Cell, 70, 501-512.
-
(1992)
Cell
, vol.70
, pp. 501-512
-
-
Dombroski, A.J.1
Walter, W.A.2
Record Jr., M.T.3
Siegele, D.A.4
Gross, C.A.5
-
24
-
-
0037173060
-
Autoregulation of a bacterial σ factor explored by using segmental isotopic labeling and NMR
-
DOI 10.1073/pnas.132033899
-
Camarero, JA., Shekhtman, A., Campbell, E.A., Chlenov, M., Gruber, T.M., Bryant, DA., Darst, SA., Cowburn, D. and Muir, T.W. (2002) Autoregulation of a bacterial sigma factor explored by using segmental isotopic labeling and NMR. Proc. Natl Acad. Sci. USA, 99, 8536-8541. (Pubitemid 34693597)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.13
, pp. 8536-8541
-
-
Camarero, J.A.1
Shekhtman, A.2
Campbell, E.A.3
Chlenov, M.4
Gruber, T.M.5
Bryant, D.A.6
Darst, S.A.7
Cowburn, D.8
Muir, T.W.9
-
25
-
-
53649093127
-
A full-length group 1 bacterial sigma factor adopts a compact structure incompatible with DNA binding
-
Schwartz, E.C., Shekhtman, A., Dutta, K., Pratt, M.R., Cowburn, D., Darst, S. and Muir, T.W. (2008) A full-length group 1 bacterial sigma factor adopts a compact structure incompatible with DNA binding. Chem. Biol., 15, 1091-1103.
-
(2008)
Chem. Biol.
, vol.15
, pp. 1091-1103
-
-
Schwartz, E.C.1
Shekhtman, A.2
Dutta, K.3
Pratt, M.R.4
Cowburn, D.5
Darst, S.6
Muir, T.W.7
-
26
-
-
0036840677
-
Role of the RNA polymerase sigma subunit in transcription initiation
-
DOI 10.1016/S0923-2508(02)01368-2, PII S0923250802013682
-
Borukhov, S. and Severinov, K. (2002) Role of the RNA polymerase sigma subunit in transcription initiation. Res. Microbiol., 153, 557-562. (Pubitemid 35223308)
-
(2002)
Research in Microbiology
, vol.153
, Issue.9
, pp. 557-562
-
-
Borukhov, S.1
Severinov, K.2
-
27
-
-
0036469062
-
A role for interaction of the RNA polymerase flap domain with the σ subunit in promoter recognition
-
DOI 10.1126/science.1066303
-
Kuznedelov, K., Minakhin, L., Niedziela-Majka, A., Dove, S.L., Rogulja, D., Nickels, B.E., Hochschild, A., Heyduk, T. and Severinov, K. (2002) A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition. Science, 295, 855-857. (Pubitemid 34118366)
-
(2002)
Science
, vol.295
, Issue.5556
, pp. 855-857
-
-
Kuznedelov, K.1
Minakhin, L.2
Niedziela-Majka, A.3
Dove, S.L.4
Rogulja, D.5
Nickels, B.E.6
Hochschild, A.7
Heyduk, T.8
Severinov, K.9
-
28
-
-
0033578701
-
Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution
-
Zhang, G, Campbell, E.A., Minakhin, L., Richter, C, Severinov, K. and Darst, SA. (1999) Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution. Cell, 98, 811-824.
-
(1999)
Cell
, vol.98
, pp. 811-824
-
-
Zhang, G.1
Campbell, E.A.2
Minakhin, L.3
Richter, C.4
Severinov, K.5
Darst, S.A.6
-
29
-
-
0035967922
-
70
-
DOI 10.1016/S0092-8674(01)00398-1
-
Young, B.A., Anthony, L.C, Gruber, T.M., Arthur, T.M., Heyduk, E., Lu, C.Z., Sharp, M.M., Heyduk, T., Burgess, R.R. and Gross, C.A. (2001) A coiled-coil from the RNA polymerase beta' subunit allosterically induces selective nontemplate strand binding by sigma(70). Cell, 105, 935-944. (Pubitemid 32635094)
-
(2001)
Cell
, vol.105
, Issue.7
, pp. 935-944
-
-
Young, B.A.1
Anthony, L.C.2
Gruber, T.M.3
Arthur, T.M.4
Heyduk, E.5
Lu, C.Z.6
Sharp, M.M.7
Heyduk, T.8
Burgess, R.R.9
Gross, C.A.10
-
30
-
-
0029831067
-
The sigma subunit of Escherichia coli RNA polymerase senses promoter spacing
-
DOI 10.1073/pnas.93.17.8858
-
Dombroski, A.J., Johnson, B.D., Lonetto, M. and Gross, C.A. (1996) The sigma subunit of Escherichia coli RNA polymerase senses promoter spacing. Proc. Natl Acad. Sci. USA, 93, 8858-8862. (Pubitemid 26281981)
-
(1996)
Proceedings of the National Academy of Sciences of the United States of America
, vol.93
, Issue.17
, pp. 8858-8862
-
-
Dombroski, A.J.1
Johnson, B.D.2
Lonetto, M.3
Gross, C.A.4
-
31
-
-
0023650609
-
Analysis of E. coli promoter sequences
-
Harley, C.B. and Reynolds, R.P. (1987) Analysis of E. coli promoter sequences. Nucleic Acids Res., 15, 2343-2361.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 2343-2361
-
-
Harley, C.B.1
Reynolds, R.P.2
-
32
-
-
0021111879
-
Compilation and analysis of Escherichia coli promoter DNA sequences
-
Hawley, D.K. and McClure, W.R. (1983) Compilation and analysis of Escherichia coli promoter DNA sequences. Nucleic Acids Res., 11, 2237-2255.
-
(1983)
Nucleic Acids Res.
, vol.11
, pp. 2237-2255
-
-
Hawley, D.K.1
McClure, W.R.2
-
33
-
-
0029041524
-
Compilation and analysis of Bacillus subtilis sigma A-dependent promoter sequences: Evidence for extended contact between RNA polymerase and upstream promoter DNA
-
Helmann, J.D. (1995) Compilation and analysis of Bacillus subtilis sigma A-dependent promoter sequences: evidence for extended contact between RNA polymerase and upstream promoter DNA. Nucleic Acids Res., 23, 2351-2360.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 2351-2360
-
-
Helmann, J.D.1
-
34
-
-
0021100019
-
Essential structure of E. coli promoter: Effect of spacer length between the two consensus sequences on promoter function
-
Aoyama, T., Takanami, M., Ohtsuka, E., Taniyama, Y., Marumoto, R., Sato, H. and Ikehara, M. (1983) Essential structure of E. coli promoter: effect of spacer length between the two consensus sequences on promoter function. Nucleic Acids Res., 11, 5855-5864.
-
(1983)
Nucleic Acids Res.
, vol.11
, pp. 5855-5864
-
-
Aoyama, T.1
Takanami, M.2
Ohtsuka, E.3
Taniyama, Y.4
Marumoto, R.5
Sato, H.6
Ikehara, M.7
-
35
-
-
0019425938
-
The E. coli β-lactamase attenuator mediates growth rate-dependent regulation
-
DOI 10.1038/290221a0
-
Jaurin, B., Grundstrom, T., Edlund, T. and Normark, S. (1981) The E. coli beta-lactamase attenuator mediates growth rate-dependent regulation. Nature, 290, 221-225. (Pubitemid 11149648)
-
(1981)
Nature
, vol.290
, Issue.5803
, pp. 221-225
-
-
Jaurin, B.1
Grundstrom, Th.2
Edlund, T.3
Normark, S.4
-
36
-
-
0020372008
-
Construction and analysis of in vivo activity of E. coli promoter hybrids and promoter mutants that alter the -35 to -10 spacing
-
DOI 10.1016/0378-1119(82)90042-7
-
Russell, D.R. and Bennett, GN. (1982) Construction and analysis of in vivo activity of E. coli promoter hybrids and promoter mutants that alter the -35 to -10 spacing. Gene, 20, 231-243. (Pubitemid 13155118)
-
(1982)
Gene
, vol.20
, Issue.2
, pp. 231-243
-
-
Russell, D.R.1
Bennett, G.N.2
-
37
-
-
0031041391
-
Spacing of promoter elements regulates the basal expression of the soxS gene and converts SoxR from a transcriptional activator into a repressor
-
DOI 10.1093/emboj/16.5.1056
-
Hidalgo, E. and Demple, B. (1997) Spacing of promoter elements regulates the basal expression of the soxS gene and converts SoxR from a transcriptional activator into a repressor. EMBO J., 16, 1056-1065. (Pubitemid 27113184)
-
(1997)
EMBO Journal
, vol.16
, Issue.5
, pp. 1056-1065
-
-
Hidalgo, E.1
Demple, B.2
-
38
-
-
0020480127
-
A lac promoter with a changed distance between -10 and -35 regions
-
Mandecki, W. and Reznikoff, W.S. (1982) A lac promoter with a changed distance between -10 and -35 regions. Nucleic Acids Res., 10, 903-912.
-
(1982)
Nucleic Acids Res.
, vol.10
, pp. 903-912
-
-
Mandecki, W.1
Reznikoff, W.S.2
-
39
-
-
0025160351
-
Site-specific insertion and deletion mutants in the mer promoter-operator region of Tn501; The nineteen base-pair spacer is essential for normal induction of the promoter by MerR
-
Parkhill, J. and Brown, N.L. (1990) Site-specific insertion and deletion mutants in the mer promoter-operator region of Tn501; the nineteen base-pair spacer is essential for normal induction of the promoter by MerR. Nucleic Acids Res., 18, 5157-5162.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 5157-5162
-
-
Parkhill, J.1
Brown, N.L.2
-
40
-
-
0023813904
-
Promoter recognition by Escherichia coli RNA polymerase Influence of DNA structure in the spacer separating the -10 and -35 regions
-
Auble, D.T. and deHaseth, P.L. (1988) Promoter recognition by Escherichia coli RNA polymerase. Influence of DNA structure in the spacer separating the -10 and -35 regions. J. Mol. Biol., 202, 471-482.
-
(1988)
J. Mol. Biol.
, vol.202
, pp. 471-482
-
-
Auble, D.T.1
Dehaseth, P.L.2
-
41
-
-
0024362820
-
Promoter recognition by Escherichia coli RNA polymerase. Role of the spacer DNA in functional complex formation
-
Ayers, D.G, Auble, DT. and deHaseth, P.L. (1989) Promoter recognition by Escherichia coli RNA polymerase. Role of the spacer DNA in functional complex formation. J. Mol. Biol., 207, 749-756. (Pubitemid 19175136)
-
(1989)
Journal of Molecular Biology
, vol.207
, Issue.4
, pp. 749-756
-
-
Ayers, D.G.1
Auble, D.T.2
DeHaseth, P.L.3
-
42
-
-
0034595499
-
R promoter of bacteriophage lambda affect steps in open complex formation that precede DNA strand separation
-
R promoter of bacteriophage lambda affect steps in open complex formation that precede DNA strand separation. J. Mol. Biol., 299, 337-349.
-
(2000)
J. Mol. Biol.
, vol.299
, pp. 337-349
-
-
McKane, M.1
Gussin, G.N.2
-
43
-
-
0021911806
-
Characterization in vitro of the effect of spacer length on the activity of Escherichia coli RNA polymerase at the TAC promoter
-
Mulligan, M.E., Brosius, J. and McClure, W.R. (1985) Characterization in vitro of the effect of spacer length on the activity of Escherichia coli RNA polymerase at the TAC promoter. J. Biol. Chem., 260, 3529-3538. (Pubitemid 15114353)
-
(1985)
Journal of Biological Chemistry
, vol.260
, Issue.6
, pp. 3529-3538
-
-
Mulligan, M.E.1
Brosius, J.2
McClure, W.R.3
-
45
-
-
0023473860
-
Structure and function of E. coli promoter DNA
-
Travers, AA. (1987) Structure and function of E. coli promoter DNA. CRC Crit. Rev. Biochem., 22, 181-219.
-
(1987)
CRC Crit. Rev. Biochem.
, vol.22
, pp. 181-219
-
-
Travers, A.A.1
-
46
-
-
0027172904
-
Promoter recognition by Escherichia coli RNA polymerase. Effects of single base pair deletions and insertions in the spacer DNA separating the -10 and - 35 regions are dependent on spacer DNA sequence
-
Warne, S.E. and deHaseth, P.L. (1993) Promoter recognition by Escherichia coli RNA polymerase. Effects of single base pair deletions and insertions in the spacer DNA separating the -10 and -35 regions are dependent on spacer DNA sequence. Biochemistry, 32, 6134-6140. (Pubitemid 23196866)
-
(1993)
Biochemistry
, vol.32
, Issue.24
, pp. 6134-6140
-
-
Warne, S.E.1
DeHaseth, P.L.2
-
47
-
-
0025314794
-
Overproduction, purification, and characterization of Bacillus subtilis RNA polymerase σ(A) factor
-
Chang, BY. and Doi, R.H. (1990) Overproduction, purification, and characterization of Bacillus subtilis RNA polymerase sigma A factor. J. Bacteriol., 172, 3257-3263. (Pubitemid 20179781)
-
(1990)
Journal of Bacteriology
, vol.172
, Issue.6
, pp. 3257-3263
-
-
Chang, B.-Y.1
Doi, R.H.2
-
48
-
-
0027317715
-
Conformational properties of Bacillus subtilis RNA polymerase RNA factor during transcription initiation
-
Chang, BY. and Doi, R.H. (1993) Conformational properties of Bacillus subtilis RNA polymerase sigma A factor during transcription initiation. Biochem. J., 294, 43-47. (Pubitemid 23251909)
-
(1993)
Biochemical Journal
, vol.294
, Issue.1
, pp. 43-47
-
-
Chang, B.-Y.1
Doi, R.H.2
-
49
-
-
0022432952
-
The pathway of E. coli RNA polymerase-promoter complex formation as visualized by footprinting
-
Hofer, B., Muller, D. and Koster, H. (1985) The pathway of E. coli RNA polymerase-promoter complex formation as visualized by footprinting. Nucleic Acids Res., 13, 5995-6013.
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 5995-6013
-
-
Hofer, B.1
Muller, D.2
Koster, H.3
-
50
-
-
0025369026
-
Topography of intermediates in transcription initiation of E. coli
-
Schickor, P., Metzger, W., Werel, W., Lederer, H. and Heumann, H. (1990) Topography of intermediates in transcription initiation of E. coli. EMBO J., 9, 2215-2220.
-
(1990)
EMBO J.
, vol.9
, pp. 2215-2220
-
-
Schickor, P.1
Metzger, W.2
Werel, W.3
Lederer, H.4
Heumann, H.5
-
51
-
-
0030746151
-
σ factor mutations affecting the sequence-selective interaction of RNA polymerase with -10 region single-stranded DNA
-
DOI 10.1093/nar/25.13.2603
-
Huang, X., Lopez de Saro, F.J. and Helmann, J.D. (1997) Sigma factor mutations affecting the sequence-selective interaction of RNA polymerase with -10 region single-stranded DNA. Nucleic Acids Res., 25, 2603-2609. (Pubitemid 27298156)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.13
, pp. 2603-2609
-
-
Huang, X.1
Lopez De Saro, F.J.2
Helmann, J.D.3
-
52
-
-
0031022323
-
Recognition of the -10 promoter sequence by a partial polypeptide of sigma 70 in vitro
-
Dombroski, AJ. (1997) Recognition of the -10 promoter sequence by a partial polypeptide of sigma 70 in vitro. J. Biol. Chem., 272, 3487-3494.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 3487-3494
-
-
Dombroski, A.J.1
-
53
-
-
0025783177
-
Genetic evidence for interaction of sigma A with two promoters in Bacillus subtilis
-
Kenney, T.J. and Moran, C.P. Jr (1991) Genetic evidence for interaction of sigma A with two promoters in Bacillus subtilis. J. Bacteriol., 173, 3282-3290.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 3282-3290
-
-
Kenney, T.J.1
Moran Jr., C.P.2
-
54
-
-
33745485665
-
A Basal Promoter Element Recognized by Free RNA Polymerase σ Subunit Determines Promoter Recognition by RNA Polymerase Holoenzyme
-
DOI 10.1016/j.molcel.2006.06.010, PII S1097276506004175
-
Feklistov, A., Barinova, N., Sevostyanova, A., Heyduk, E., Bass, I., Vvedenskaya, I., Kuznedelov, K., Merkiene, E., Stavrovskaya, E., Klimasauskas, S. et al. (2006) A basal promoter element recognized by free RNA polymerase sigma subunit determines promoter recognition by RNA polymerase holoenzyme. Mol. Cell, 23, 97-107. (Pubitemid 43963452)
-
(2006)
Molecular Cell
, vol.23
, Issue.1
, pp. 97-107
-
-
Feklistov, A.1
Barinova, N.2
Sevostyanova, A.3
Heyduk, E.4
Bass, I.5
Vvedenskaya, I.6
Kuznedelov, K.7
Merkiene, E.8
Stavrovskaya, E.9
Klimasauskas, S.10
Nikiforov, V.11
Heyduk, T.12
Severinov, K.13
Kulbachinskiy, A.14
-
55
-
-
34547595406
-
Specific recognition of the - 10 Promoter element by the free RNA polymerase σ subunit
-
DOI 10.1074/jbc.M702495200
-
Sevostyanova, A., Feklistov, A., Barinova, N, Heyduk, E., Bass, I., Klimasauskas, S., Heyduk, T. and Kulbachinskiy, A. (2007) Specific recognition of the -10 promoter element by the free RNA polymerase sigma subunit. J. Biol. Chem., 282, 22033-22039. (Pubitemid 47195733)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.30
, pp. 22033-22039
-
-
Sevostyanova, A.1
Feklistov, A.2
Barinova, N.3
Heyduk, E.4
Bass, I.5
Klimasauskas, S.6
Heyduk, T.7
Kulbachinskiy, A.8
-
56
-
-
75149149382
-
Utilization of variably spaced promoter-like elements by the bacterial RNA polymerase holoenzyme during early elongation
-
Devi, P.G., Campbell, E.A., Darst, SA. and Nickels, B.E. (2010) Utilization of variably spaced promoter-like elements by the bacterial RNA polymerase holoenzyme during early elongation. Mol. Microbiol., 75, 607-622.
-
(2010)
Mol. Microbiol.
, vol.75
, pp. 607-622
-
-
Devi, P.G.1
Campbell, E.A.2
Darst, S.A.3
Nickels, B.E.4
-
57
-
-
0037123659
-
Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution
-
DOI 10.1126/science.1069594
-
Murakami, K.S., Masuda, S. and Darst, S.A. (2002) Structural basis of transcription initiation: RNA polymerase holoenzyme at 4A resolution. Science, 296, 1280-1284. (Pubitemid 34522777)
-
(2002)
Science
, vol.296
, Issue.5571
, pp. 1280-1284
-
-
Murakami, K.S.1
Masuda, S.2
Darst, S.A.3
-
58
-
-
0037071844
-
Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6. A resolution
-
DOI 10.1038/nature752
-
Vassylyev, D.G., Sekine, S., Laptenko, O., Lee, J., Vassylyeva, M.N., Borukhov, S. and Yokoyama, S. (2002) Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6A resolution. Nature, 417, 712-719. (Pubitemid 34640620)
-
(2002)
Nature
, vol.417
, Issue.6890
, pp. 712-719
-
-
Vassylyev, D.G.1
Sekine, S.-I.2
Laptenko, O.3
Lee, J.4
Vassylyeva, M.N.5
Borukhov, S.6
Yokoyama, S.7
-
59
-
-
0033083036
-
70 subunit
-
DOI 10.1016/S1097-2765(00)80313-5
-
Callaci, S., Heyduk, E. and Heyduk, T. (1999) Core RNA polymerase from E. coli induces a major change in the domain arrangement of the sigma 70 subunit. Mol. Cell, 3, 229-238. (Pubitemid 29292623)
-
(1999)
Molecular Cell
, vol.3
, Issue.2
, pp. 229-238
-
-
Callaci, S.1
Heyduk, E.2
Heyduk, T.3
Doisy, E.A.4
-
60
-
-
0019886927
-
Salt dependence of the kinetics of the lac repressor-operator interaction: Role of nonoperator deoxyribonucleic acid in the association reaction
-
Barkley, M.D. (1981) Salt dependence of the kinetics of the lac repressor-operator interaction: role of nonoperator deoxyribonucleic acid in the association reaction. Biochemistry, 20, 3833-3842.
-
(1981)
Biochemistry
, vol.20
, pp. 3833-3842
-
-
Barkley, M.D.1
-
61
-
-
0019867850
-
Diffusion-driven mechanisms of protein translocation on nucleic acids. III. The Escherichia coli lac repressor-operator interaction: Kinetic measurements and conclusions
-
Winter, R.B., Berg, O.G. and von Hippel, P.H. (1981) Diffusion-driven mechanisms of protein translocation on nucleic acids. 3. The Escherichia coli lac repressor-operator interaction: kinetic measurements and conclusions. Biochemistry, 20, 6961-6977. (Pubitemid 12185949)
-
(1981)
Biochemistry
, vol.20
, Issue.24
, pp. 6961-6977
-
-
Winter, R.B.1
Berg, O.G.2
Von Hippel, P.H.3
|