-
1
-
-
0032553125
-
70 binding site on the N terminus of the Escherichia coli RNA polymerase β′ subunit
-
70 binding site on the N terminus of the Escherichia coli RNA polymerase β′ subunit. J Biol Chem 273 : 31381 31387.
-
(1998)
J Biol Chem
, vol.273
, pp. 31381-31387
-
-
Arthur, T.M.1
Burgess, R.R.2
-
2
-
-
0033083036
-
Core RNA polymerase from E. coli induces a major change in the domain arrangement of the sigma 70 subunit
-
Callaci, S., Heyduk, E. Heyduk, T. (1999) Core RNA polymerase from E. coli induces a major change in the domain arrangement of the sigma 70 subunit. Mol Cell 3 : 229 238.
-
(1999)
Mol Cell
, vol.3
, pp. 229-238
-
-
Callaci, S.1
Heyduk, E.2
Heyduk, T.3
-
3
-
-
0036203066
-
Structure of the bacterial RNA polymerase promoter specificity sigma subunit
-
Campbell, E.A., Muzzin, O., Chlenov, M., Sun, J.L., Olson, C.A., Weinman, O., et al. (2002) Structure of the bacterial RNA polymerase promoter specificity sigma subunit. Mol Cell 9 : 527 539.
-
(2002)
Mol Cell
, vol.9
, pp. 527-539
-
-
Campbell, E.A.1
Muzzin, O.2
Chlenov, M.3
Sun, J.L.4
Olson, C.A.5
Weinman, O.6
-
4
-
-
33846260077
-
The bacteriophage λq anti-terminator protein regulates late gene expression as a stable component of the transcription elongation complex
-
Deighan, P. Hochschild, A. (2007) The bacteriophage λQ anti-terminator protein regulates late gene expression as a stable component of the transcription elongation complex. Mol Microbiol 63 : 911 920.
-
(2007)
Mol Microbiol
, vol.63
, pp. 911-920
-
-
Deighan, P.1
Hochschild, A.2
-
5
-
-
55749096593
-
The bacteriophage λ Q antiterminator protein contacts the β-flap domain of RNA polymerase
-
Deighan, P., Diez, C.M., Leibman, M., Hochschild, A. Nickels, B.E. (2008) The bacteriophage λ Q antiterminator protein contacts the β-flap domain of RNA polymerase. Proc Natl Acad Sci USA 105 : 15305 15310.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 15305-15310
-
-
Deighan, P.1
Diez, C.M.2
Leibman, M.3
Hochschild, A.4
Nickels, B.E.5
-
6
-
-
0024355282
-
A mutant Escherichia coli sigma 70 subunit of RNA polymerase with altered promoter specificity
-
Gardella, T., Moyle, H. Susskind, M.M. (1989) A mutant Escherichia coli sigma 70 subunit of RNA polymerase with altered promoter specificity. J Mol Biol 206 : 579 590.
-
(1989)
J Mol Biol
, vol.206
, pp. 579-590
-
-
Gardella, T.1
Moyle, H.2
Susskind, M.M.3
-
7
-
-
0024564063
-
Early transcribed sequences affect termination efficiency of Escherichia coli RNA polymerase
-
Goliger, J.A., Yang, X.J., Guo, H.C. Roberts, J.W. (1989) Early transcribed sequences affect termination efficiency of Escherichia coli RNA polymerase. J Mol Biol 205 : 331 341.
-
(1989)
J Mol Biol
, vol.205
, pp. 331-341
-
-
Goliger, J.A.1
Yang, X.J.2
Guo, H.C.3
Roberts, J.W.4
-
8
-
-
12144288236
-
A regulator that inhibits transcription by targeting an intersubunit interaction of the RNA polymerase holoenzyme
-
Gregory, B.D., Nickels, B.E., Garrity, S.J., Severinova, E., Minakhin, L., Urbauer, R.J., et al. (2004) A regulator that inhibits transcription by targeting an intersubunit interaction of the RNA polymerase holoenzyme. Proc Natl Acad Sci USA 101 : 4554 4559.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 4554-4559
-
-
Gregory, B.D.1
Nickels, B.E.2
Garrity, S.J.3
Severinova, E.4
Minakhin, L.5
Urbauer, R.J.6
-
10
-
-
0032459427
-
The functional and regulatory roles of sigma factors in transcription
-
Gross, C.A., Chan, C., Dombroski, A., Gruber, T., Sharp, M., Tupy, J. Young, B. (1998) The functional and regulatory roles of sigma factors in transcription. Cold Spring Harb Symp Quant Biol 63 : 141 155.
-
(1998)
Cold Spring Harb Symp Quant Biol
, vol.63
, pp. 141-155
-
-
Gross, C.A.1
Chan, C.2
Dombroski, A.3
Gruber, T.4
Sharp, M.5
Tupy, J.6
Young, B.7
-
11
-
-
0242692671
-
Multiple sigma subunits and the partitioning of bacterial transcription space
-
Gruber, T.M. Gross, C.A. (2003) Multiple sigma subunits and the partitioning of bacterial transcription space. Annu Rev Microbiol 57 : 441 466.
-
(2003)
Annu Rev Microbiol
, vol.57
, pp. 441-466
-
-
Gruber, T.M.1
Gross, C.A.2
-
13
-
-
33745832269
-
Region 3.2 of the sigma subunit contributes to the binding of the 3′-initiating nucleotide in the RNA polymerase active center and facilitates promoter clearance during initiation
-
Kulbachinskiy, A. Mustaev, A. (2006) Region 3.2 of the sigma subunit contributes to the binding of the 3′-initiating nucleotide in the RNA polymerase active center and facilitates promoter clearance during initiation. J Biol Chem 281 : 18273 18276.
-
(2006)
J Biol Chem
, vol.281
, pp. 18273-18276
-
-
Kulbachinskiy, A.1
Mustaev, A.2
-
14
-
-
0036469062
-
A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition
-
Kuznedelov, K., Minakhin, L., Niedziela-Majka, A., Dove, S.L., Rogulja, D., Nickels, B.E., et al. (2002) A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition. Science 295 : 855 857.
-
(2002)
Science
, vol.295
, pp. 855-857
-
-
Kuznedelov, K.1
Minakhin, L.2
Niedziela-Majka, A.3
Dove, S.L.4
Rogulja, D.5
Nickels, B.E.6
-
15
-
-
0026612797
-
The sigma 70 family: Sequence conservation and evolutionary relationships
-
Lonetto, M., Gribskov, M. Gross, C.A. (1992) The sigma 70 family: sequence conservation and evolutionary relationships. J Bacteriol 174 : 3843 3849.
-
(1992)
J Bacteriol
, vol.174
, pp. 3843-3849
-
-
Lonetto, M.1
Gribskov, M.2
Gross, C.A.3
-
16
-
-
0030271890
-
70 subunit fragment from E. coli RNA polymerase
-
DOI 10.1016/S0092-8674(00)81329-X
-
Malhotra, A., Severinova, E. Darst, S.A. (1996) Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase. Cell 87 : 127 136. (Pubitemid 26337397)
-
(1996)
Cell
, vol.87
, Issue.1
, pp. 127-136
-
-
Malhotra, A.1
Severinova, E.2
Darst, S.A.3
-
17
-
-
0035979245
-
Restructuring of an RNA polymerase holoenzyme elongation complex by lambdoid phage Q proteins
-
Marr, M.T., Datwyler, S.A., Meares, C.F. Roberts, J.W. (2001) Restructuring of an RNA polymerase holoenzyme elongation complex by lambdoid phage Q proteins. Proc Natl Acad Sci USA 98 : 8972 8978.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8972-8978
-
-
Marr, M.T.1
Datwyler, S.A.2
Meares, C.F.3
Roberts, J.W.4
-
18
-
-
27644560257
-
Sigma and RNA polymerase: An on-again, off-again relationship?
-
Mooney, R.A., Darst, S.A. Landick, R. (2005) Sigma and RNA polymerase: an on-again, off-again relationship? Mol Cell 20 : 335 345.
-
(2005)
Mol Cell
, vol.20
, pp. 335-345
-
-
Mooney, R.A.1
Darst, S.A.2
Landick, R.3
-
19
-
-
0037308665
-
Bacterial RNA polymerases: The wholo story
-
Murakami, K.S. Darst, S.A. (2003) Bacterial RNA polymerases: the wholo story. Curr Opin Struct Biol 13 : 31 39.
-
(2003)
Curr Opin Struct Biol
, vol.13
, pp. 31-39
-
-
Murakami, K.S.1
Darst, S.A.2
-
20
-
-
0037123602
-
Structural basis of transcription initiation: An RNA polymerase holoenzyme-DNA complex
-
DOI 10.1126/science.1069595
-
Murakami, K.S., Masuda, S., Campbell, E.A., Muzzin, O. Darst, S.A. (2002a) Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex. Science 296 : 1285 1290. (Pubitemid 34522778)
-
(2002)
Science
, vol.296
, Issue.5571
, pp. 1285-1290
-
-
Murakami, K.S.1
Masuda, S.2
Campbell, E.A.3
Muzzin, O.4
Darst, S.A.5
-
21
-
-
0037123659
-
Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution
-
DOI 10.1126/science.1069594
-
Murakami, K.S., Masuda, S. Darst, S.A. (2002b) Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution. Science 296 : 1280 1284. (Pubitemid 34522777)
-
(2002)
Science
, vol.296
, Issue.5571
, pp. 1280-1284
-
-
Murakami, K.S.1
Masuda, S.2
Darst, S.A.3
-
24
-
-
33750493565
-
70 region 4/β flap interaction facilitates engagement of RNA polymerase by the Q antiterminator
-
70 region 4/β flap interaction facilitates engagement of RNA polymerase by the Q antiterminator. Mol Cell 24 : 457 468.
-
(2006)
Mol Cell
, vol.24
, pp. 457-468
-
-
Nickels, B.E.1
Roberts, C.W.2
Roberts, J.W.3
Hochschild, A.4
-
27
-
-
0027978530
-
Function of a nontranscribed DNA strand site in transcription elongation
-
Ring, B.Z. Roberts, J.W. (1994) Function of a nontranscribed DNA strand site in transcription elongation. Cell 78 : 317 324.
-
(1994)
Cell
, vol.78
, pp. 317-324
-
-
Ring, B.Z.1
Roberts, J.W.2
-
29
-
-
0032466791
-
Antitermination by bacteriophage lambda Q protein
-
Roberts, J.W., Yarnell, W., Bartlett, E., Guo, J., Marr, M., Ko, D.C., Sun, H. Roberts, C.W. (1998) Antitermination by bacteriophage lambda Q protein. Cold Spring Harb Symp Quant Biol 63 : 319 325.
-
(1998)
Cold Spring Harb Symp Quant Biol
, vol.63
, pp. 319-325
-
-
Roberts, J.W.1
Yarnell, W.2
Bartlett, E.3
Guo, J.4
Marr, M.5
Ko, D.C.6
Sun, H.7
Roberts, C.W.8
-
30
-
-
0030589041
-
70 subunit
-
DOI 10.1006/jmbi.1996.0604
-
Severinova, E., Severinov, K., Fenyö, D., Marr, M., Brody, E.N., Roberts, J.W., et al. (1996) Domain organization of the Escherichia coli RNA polymerase sigma 70 subunit. J Mol Biol 263 : 637 647. (Pubitemid 26395056)
-
(1996)
Journal of Molecular Biology
, vol.263
, Issue.5
, pp. 637-647
-
-
Severinova, E.1
Severinov, K.2
Fenyo, D.3
Marr, M.4
Brody, E.N.5
Roberts, J.W.6
Chait, B.T.7
Darst, S.A.8
-
31
-
-
1842766125
-
28/FlgM reveals an intact sigma factor in an inactive conformation
-
28/FlgM reveals an intact sigma factor in an inactive conformation. Mol Cell 14 : 127 138.
-
(2004)
Mol Cell
, vol.14
, pp. 127-138
-
-
Sorenson, M.K.1
Ray, S.S.2
Darst, S.A.3
-
32
-
-
0024564062
-
Sequences linked to prokaryotic promoters can affect the efficiency of downstream termination sites
-
Telesnitsky, A.P. Chamberlin, M.J. (1989) Sequences linked to prokaryotic promoters can affect the efficiency of downstream termination sites. J Mol Biol 205 : 315 330.
-
(1989)
J Mol Biol
, vol.205
, pp. 315-330
-
-
Telesnitsky, A.P.1
Chamberlin, M.J.2
-
33
-
-
1542346163
-
High-throughput beta-galactosidase assay for bacterial cell-based reporter systems
-
Thibodeau, S.A., Fang, R. Joung, J.K. (2004) High-throughput beta-galactosidase assay for bacterial cell-based reporter systems. Biotechniques 36 : 410 415.
-
(2004)
Biotechniques
, vol.36
, pp. 410-415
-
-
Thibodeau, S.A.1
Fang, R.2
Joung, J.K.3
-
34
-
-
0037071844
-
Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6. A resolution
-
DOI 10.1038/nature752
-
Vassylyev, D.G., Sekine, S., Laptenko, O., Lee, J., Vassylyeva, M.N., Borukhov, S. Yokoyama, S. (2002) Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution. Nature 417 : 712 719. (Pubitemid 34640620)
-
(2002)
Nature
, vol.417
, Issue.6890
, pp. 712-719
-
-
Vassylyev, D.G.1
Sekine, S.-I.2
Laptenko, O.3
Lee, J.4
Vassylyeva, M.N.5
Borukhov, S.6
Yokoyama, S.7
-
35
-
-
34447499995
-
Structural basis for transcription elongation by bacterial RNA polymerase
-
DOI 10.1038/nature05932, PII NATURE05932
-
Vassylyev, D.G., Vassylyeva, M.N., Perederina, A., Tahirov, T.H. Artsimovitch, I. (2007) Structural basis for transcription elongation by bacterial RNA polymerase. Nature 448 : 157 162. (Pubitemid 47067370)
-
(2007)
Nature
, vol.448
, Issue.7150
, pp. 157-162
-
-
Vassylyev, D.G.1
Vassylyeva, M.N.2
Perederina, A.3
Tahirov, T.H.4
Artsimovitch, I.5
-
36
-
-
0032529668
-
Genetic analysis of prokaryotic and eukaryotic DNA-binding proteins in Escherichia coli
-
Whipple, F.W. (1998) Genetic analysis of prokaryotic and eukaryotic DNA-binding proteins in Escherichia coli. Nucleic Acids Res 26 : 3700 3706.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 3700-3706
-
-
Whipple, F.W.1
-
37
-
-
0026663397
-
The phage lambda gene Q transcription antiterminator binds DNA in the late gene promoter as it modifies RNA polymerase
-
Yarnell, W.S. Roberts, J.W. (1992) The phage lambda gene Q transcription antiterminator binds DNA in the late gene promoter as it modifies RNA polymerase. Cell 69 : 1181 1189.
-
(1992)
Cell
, vol.69
, pp. 1181-1189
-
-
Yarnell, W.S.1
Roberts, J.W.2
-
38
-
-
0033597435
-
Mechanism of intrinsic transcription termination and antitermination
-
Yarnell, W.S. Roberts, J.W. (1999) Mechanism of intrinsic transcription termination and antitermination. Science 284 : 611 615.
-
(1999)
Science
, vol.284
, pp. 611-615
-
-
Yarnell, W.S.1
Roberts, J.W.2
-
40
-
-
1442281182
-
Minimal machinery of RNA polymerase holoenzyme sufficient for promoter melting
-
Young, B.A., Gruber, T.M. Gross, C.A. (2004) Minimal machinery of RNA polymerase holoenzyme sufficient for promoter melting. Science 303 : 1382 1384.
-
(2004)
Science
, vol.303
, pp. 1382-1384
-
-
Young, B.A.1
Gruber, T.M.2
Gross, C.A.3
|