-
1
-
-
44249090672
-
Assessment of the genetic diversity of Xanthomonas axonopodis pv. phaseoli and Xanthomonas fuscans subsp fuscans as a basis to identify putative pathogenicity genes and a type III secretion system of the SPI-1 family by multiple suppression subtractive hybridizations
-
Alavi, S. M., Sanjari, S., Durand, F., Brin, C., Manceau, C., and Poussier, S. 2008. Assessment of the genetic diversity of Xanthomonas axonopodis pv. phaseoli and Xanthomonas fuscans subsp. fuscans as a basis to identify putative pathogenicity genes and a type III secretion system of the SPI-1 family by multiple suppression subtractive hybridizations. Appl. Environ. Microbiol. 74:3295-3301.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 3295-3301
-
-
Alavi, S.M.1
Sanjari, S.2
Durand, F.3
Brin, C.4
Manceau, C.5
Poussier, S.6
-
2
-
-
33749257294
-
Ralstonia solanacearum requires F-box-like domain-containing type III effectors to promote disease on several host plants
-
Angot, A., Peeters, N., Lechner, E., Vailleau, F., Baud, C., Gentzbittel, L., Sartorel, E., Genschik, P., Boucher, C., and Genin, S. 2006. Ralstonia solanacearum requires F-box-like domain-containing type III effectors to promote disease on several host plants. Proc. Natl. Acad. Sci. U.S.A. 103:14620-14625.
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 14620-14625
-
-
Angot, A.1
Peeters, N.2
Lechner, E.3
Vailleau, F.4
Baud, C.5
Gentzbittel, L.6
Sartorel, E.7
Genschik, P.8
Boucher, C.9
Genin, S.10
-
3
-
-
0035039660
-
Xanthomonas albilineans and the antipathogenesis approach to disease control
-
Birch, R. 2001. Xanthomonas albilineans and the antipathogenesis approach to disease control. Mol. Plant Pathol. 2:1-11.
-
(2001)
Mol. Plant Pathol.
, vol.2
, pp. 1-11
-
-
Birch, R.1
-
4
-
-
0033636701
-
The virulence plasmid pWR100 and the repertoire of proteins secreted by the type III secretion apparatus of Shigella flexneri
-
Buchrieser, C., Glaser, P., Rusniok, C., Nedjari, H., d'Hauteville, H., Kunst, F., Sansonetti, P., and Parsot, C. 2000. The virulence plasmid pWR100 and the repertoire of proteins secreted by the type III secretion apparatus of Shigella flexneri. Mol. Microbiol. 38:760-771.
-
(2000)
Mol. Microbiol.
, vol.38
, pp. 760-771
-
-
Buchrieser, C.1
Glaser, P.2
Rusniok, C.3
Nedjari, H.4
D'Hauteville, H.5
Kunst, F.6
Sansonetti, P.7
Parsot, C.8
-
5
-
-
77949375230
-
Amplified fragment length polymorphism and multilocus sequence analysis-based genotypic relatedness among pathogenic variants of Xanthomonas citri pv. citri and Xanthomonas campestris pv bilvae
-
Bui Thi Ngoc, L., Verniere, C., Jouen, E., Ah-You, N., Lefeuvre, P., Chiroleu, F., Gagnevin, L., and Pruvost, O. 2010. Amplified fragment length polymorphism and multilocus sequence analysis-based genotypic relatedness among pathogenic variants of Xanthomonas citri pv. citri and Xanthomonas campestris pv. bilvae. Int. J. Syst. Evol. Microbiol. 60:515-525.
-
(2010)
Int. J. Syst. Evol. Microbiol.
, vol.60
, pp. 515-525
-
-
Bui Thi Ngoc, L.1
Verniere, C.2
Jouen, E.3
Ah-You, N.4
Lefeuvre, P.5
Chiroleu, F.6
Gagnevin, L.7
Pruvost, O.8
-
6
-
-
0026480991
-
Chromosomal insertion sites for phages and plasmids
-
Campbell, A. M. 1992. Chromosomal insertion sites for phages and plasmids. J. Bacteriol. 174:7495-7499.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 7495-7499
-
-
Campbell, A.M.1
-
7
-
-
65249123434
-
Epiphytic populations of Xanthomonas albilineans and subsequent sugarcane stalk infection are linked to rainfall in Guadeloupe
-
Champoiseau, P., Rott, P., and Daugrois, J. H. 2009. Epiphytic populations of Xanthomonas albilineans and subsequent sugarcane stalk infection are linked to rainfall in Guadeloupe. Plant Dis. 93:339-346.
-
(2009)
Plant Dis.
, vol.93
, pp. 339-346
-
-
Champoiseau, P.1
Rott, P.2
Daugrois, J.H.3
-
8
-
-
51849104775
-
Living in two worlds: The plant and insect lifestyles of Xylella fastidiosa
-
Chatterjee, S., Almeida, R. P. P., and Lindow, S. 2008. Living in two worlds: The plant and insect lifestyles of Xylella fastidiosa. Annu. Rev. Phytopathol. 46:243-271.
-
(2008)
Annu. Rev. Phytopathol.
, vol.46
, pp. 243-271
-
-
Chatterjee, S.1
Almeida, R.P.P.2
Lindow, S.3
-
9
-
-
33750110911
-
The type III secretion injectisome
-
Cornelis, G. R. 2006. The type III secretion injectisome. Nat. Rev. Microbiol. 4:811-825.
-
(2006)
Nat. Rev. Microbiol.
, vol.4
, pp. 811-825
-
-
Cornelis, G.R.1
-
10
-
-
0033977312
-
Prophage lambda induces terminal recombination in Escherichia coli by inhibiting chromosome dimer resolution: An orientation-dependent cis-effect lending support to bipolarization of the terminus
-
Corre, J., Patte, J., and Louarn, J.-M. 2000. Prophage lambda induces terminal recombination in Escherichia coli by inhibiting chromosome dimer resolution: An orientation-dependent cis-effect lending support to bipolarization of the terminus. Genetics 154:39-48.
-
(2000)
Genetics
, vol.154
, pp. 39-48
-
-
Corre, J.1
Patte, J.2
Louarn, J.-M.3
-
11
-
-
78651318293
-
A bacterial pathogen uses distinct type III secretion systems to alternate between host kingdoms. (Abstr.)
-
Correa, V. R., Majerczak, D. R., Ammar, E., Merighi, M., Pratt, R. C., Redinbaugh, M. G., Coplin, D. L., and Hogenhout, S. A. 2010. A bacterial pathogen uses distinct type III secretion systems to alternate between host kingdoms. (Abstr.) Phytopathology 100:S27.
-
(2010)
Phytopathology
, vol.100
-
-
Correa, V.R.1
Majerczak, D.R.2
Ammar, E.3
Merighi, M.4
Pratt, R.C.5
Redinbaugh, M.G.6
Coplin, D.L.7
Hogenhout, S.A.8
-
12
-
-
73949118739
-
Molecular mechanisms of Escherichia coli pathogenicity
-
Croxen, M. A., and Finlay, B. B. 2010. Molecular mechanisms of Escherichia coli pathogenicity. Nat. Rev. Microbiol. 8:26-38.
-
(2010)
Nat. Rev. Microbiol.
, vol.8
, pp. 26-38
-
-
Croxen, M.A.1
Finlay, B.B.2
-
13
-
-
0038792184
-
Aerial contamination of sugarcane in Guadeloupe by two strains of Xanthomonas albilineans
-
Daugrois, J. H., Dumont, V., Champoiseau, P., Costet, L., Boisne-Noc, R., and Rott, P. 2003. Aerial contamination of sugarcane in Guadeloupe by two strains of Xanthomonas albilineans. Eur. J. Plant Pathol. 109:445-458.
-
(2003)
Eur. J. Plant Pathol.
, vol.109
, pp. 445-458
-
-
Daugrois, J.H.1
Dumont, V.2
Champoiseau, P.3
Costet, L.4
Boisne-Noc, R.5
Rott, P.6
-
14
-
-
0028042123
-
Evaluation of selective media and immunoassays for detection of Xanthomonas albilineans, causal agent of sugarcane leaf scald disease
-
Davis, M., Rott, P., Baudin, P., and Dean, J. 1994. Evaluation of selective media and immunoassays for detection of Xanthomonas albilineans, causal agent of sugarcane leaf scald disease. Plant Dis. 78:78-82. (Pubitemid 2045485)
-
(1994)
Plant Disease
, vol.78
, Issue.1
, pp. 78-82
-
-
Davis, M.J.1
Rott, P.2
Baudin, P.3
Dean, J.L.4
-
15
-
-
0030902202
-
Intraspecific genomic variation within Xanthomonas albilineans, the sugarcane leaf scald pathogen
-
Davis, M., Rott, P., Warmuth, C., Chatenet, M., and Baudin, P. 1997. Intraspecific genomic variation within Xanthomonas albilineans, the sugarcane leaf scald pathogen. Phytopathology 87:316-324.
-
(1997)
Phytopathology
, vol.87
, pp. 316-324
-
-
Davis, M.1
Rott, P.2
Warmuth, C.3
Chatenet, M.4
Baudin, P.5
-
16
-
-
77955254855
-
Dynamics of genome evolution in facultative symbionts of aphids
-
Degnan, P. H., Leonardo, T. E., Cass, B. N., Hurwitz, B., Stern, D., Gibbs, R. A., Richards, S., and Moran, N. A. 2009. Dynamics of genome evolution in facultative symbionts of aphids. Environ. Microbiol. 12:2060-2069.
-
(2009)
Environ. Microbiol.
, vol.12
, pp. 2060-2069
-
-
Degnan, P.H.1
Leonardo, T.E.2
Cass, B.N.3
Hurwitz, B.4
Stern, D.5
Gibbs, R.A.6
Richards, S.7
Moran, N.A.8
-
17
-
-
34447548920
-
Salmonella pathogenicity islands in host specificity, host pathogen-interactions and antibiotics resistance of Salmonella enterica
-
Gerlach, R., and Hensel, M. 2007. Salmonella pathogenicity islands in host specificity, host pathogen-interactions and antibiotics resistance of Salmonella enterica. Berl. Muench. Tieraerztl. Wochenschr. 120:317-327.
-
(2007)
Berl. Muench. Tieraerztl. Wochenschr.
, vol.120
, pp. 317-327
-
-
Gerlach, R.1
Hensel, M.2
-
18
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.
-
Guindon, S., and Gascuel, O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52:696-704.
-
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
19
-
-
0033935581
-
The natural evolutionary relationships among prokaryotes
-
Gupta, R. S. 2000. The natural evolutionary relationships among prokaryotes. Crit. Rev. Microbiol. 26:111-131.
-
(2000)
Crit. Rev. Microbiol.
, vol.26
, pp. 111-131
-
-
Gupta, R.S.1
-
20
-
-
33750464583
-
Diversifying selection drives the evolution of the type III secretion system pilus of Pseudomonas syringae
-
Guttman, D. S., Gropp, S. J., Morgan, R. L., and Wang, P. W. 2006. Diversifying selection drives the evolution of the type III secretion system pilus of Pseudomonas syringae. Mol. Biol. Evol. 23:2342-2354.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 2342-2354
-
-
Guttman, D.S.1
Gropp, S.J.2
Morgan, R.L.3
Wang, P.W.4
-
21
-
-
69949188053
-
A "repertoire for repertoire" hypo thesis: Repertoires of type three effectors are candidate determinants of host specificity in Xanthomonas
-
Hajri, A., Brin, C., Hunault, G., Lardeux, F., Lemaire, C., Manceau, C., Boureau, T., and Poussier, S. 2009. A "repertoire for repertoire" hypothesis: Repertoires of type three effectors are candidate determinants of host specificity in Xanthomonas. PLoS One 4:e6632.
-
(2009)
PLoS One
, vol.4
-
-
Hajri, A.1
Brin, C.2
Hunault, G.3
Lardeux, F.4
Lemaire, C.5
Manceau, C.6
Boureau, T.7
Poussier, S.8
-
22
-
-
33846032702
-
The phytotoxin albicidin is a novel inhibitor of DNA gyrase
-
Hashimi, S. M., Wall, M. K., Smith, A. B., Maxwell, A., and Birch, R. G. 2007. The phytotoxin albicidin is a novel inhibitor of DNA gyrase. Antimicrob. Agents Chemother. 51:181-187.
-
(2007)
Antimicrob. Agents Chemother.
, vol.51
, pp. 181-187
-
-
Hashimi, S.M.1
Wall, M.K.2
Smith, A.B.3
Maxwell, A.4
Birch, R.G.5
-
23
-
-
8844275498
-
Type III protein secretion mechanism in mammalian and plant pathogens
-
He, S. Y., Nomura, K., and Whittam, T. S. 2004. Type III protein secretion mechanism in mammalian and plant pathogens. Biochim. Biophys. Acta 1694:181-206.
-
(2004)
Biochim. Biophys. Acta
, vol.1694
, pp. 181-206
-
-
He, S.Y.1
Nomura, K.2
Whittam, T.S.3
-
24
-
-
24944453122
-
Whole-genome sequence analysis of Pseudomonas syringae pv phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition
-
Joardar, V., Lindeberg, M., Jackson, R. W., Selengut, J., Dodson, R., Brinkac, L. M., Daugherty, S. C., Deboy, R., Durkin, A. S., Giglio, M. G., Madupu, R., Nelson, W. C., Rosovitz, M. J., Sullivan, S., Crabtree, J., Creasy, T., Davidsen, T., Haft, D. H., Zafar, N., Zhou, L., Halpin, R., Holley, T., Khouri, H., Feldblyum, T., White, O., Fraser, C. M., Chatterjee, A. K., Cartinhour, S., Schneider, D. J., Mansfield, J., Collmer, A., and Buell, C. R. 2005. Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. J. Bacteriol. 187:6488-6498.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 6488-6498
-
-
Joardar, V.1
Lindeberg, M.2
Jackson, R.W.3
Selengut, J.4
Dodson, R.5
Brinkac, L.M.6
Daugherty, S.C.7
Deboy, R.8
Durkin, A.S.9
Giglio, M.G.10
Madupu, R.11
Nelson, W.C.12
Rosovitz, M.J.13
Sullivan, S.14
Crabtree, J.15
Creasy, T.16
Davidsen, T.17
Haft, D.H.18
Zafar, N.19
Zhou, L.20
Halpin, R.21
Holley, T.22
Khouri, H.23
Feldblyum, T.24
White, O.25
Fraser, C.M.26
Chatterjee, A.K.27
Cartinhour, S.28
Schneider, D.J.29
Mansfield, J.30
Collmer, A.31
Buell, C.R.32
more..
-
25
-
-
59849120374
-
How Xanthomonas type III effectors manipulate the host plant
-
Kay, S., and Bonas, U. 2009. How Xanthomonas type III effectors manipulate the host plant. Curr. Opin. Microbiol. 12:37-43.
-
(2009)
Curr. Opin. Microbiol.
, vol.12
, pp. 37-43
-
-
Kay, S.1
Bonas, U.2
-
26
-
-
77956845609
-
Chitin utilization by the insect-transmitted bacterium Xylella fastidiosa
-
Killiny, N., Prado, S. S., and Almeida, R. P. P. 2010. Chitin utilization by the insect-transmitted bacterium Xylella fastidiosa. Appl. Environ. Microbiol. 76:6134-6140.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 6134-6140
-
-
Killiny, N.1
Prado, S.S.2
Almeida, R.P.P.3
-
27
-
-
48749097909
-
The genome of Erwinia tasmaniensis strain Et1/99, a non-pathogenic bacterium in the genus
-
Kube, M., Migdoll, A., Müller, I., Kuhl, H., Beck, A., Reinhardt, R., and Geider, K. 2008. The genome of Erwinia tasmaniensis strain Et1/99, a non-pathogenic bacterium in the genus Erwinia. Environ. Microbiol. 10:2211-2222.
-
(2008)
Erwinia. Environ. Microbiol.
, vol.10
, pp. 2211-2222
-
-
Kube, M.1
Migdoll, A.2
Müller, I.3
Kuhl, H.4
Beck, A.5
Reinhardt, R.6
Geider, K.7
-
28
-
-
77953655210
-
Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae
-
Kube, M., Migdoll, A., Gehring, I., Heitmann, K., Mayer, Y., Kuhl, H., Knaust, F., Geider, K., and Reinhardt, R. 2010. Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae. BMC Genomics 11:393.
-
(2010)
BMC Genomics
, vol.11
, pp. 393
-
-
Kube, M.1
Migdoll, A.2
Gehring, I.3
Heitmann, K.4
Mayer, Y.5
Kuhl, H.6
Knaust, F.7
Geider, K.8
Reinhardt, R.9
-
29
-
-
0030731108
-
The complete genome sequence of the gram-positive bacterium Bacillus subtilis
-
DOI 10.1038/36786
-
Kunst, F., Ogasawara, N., Moszer, I., Albertini, A. M., Alloni, G., Azevedo, V., Bertero, M. G., Bessieres, P., Bolotin, A., Borchert, S., Borriss, R., Boursier, L., Brans, A., Braun, M., Brignell, S. C., Bron, S., Brouillet, S., Bruschi, C. V., Caldwell, B., Capuano, V., Carter, N. M., Choi, S.K., Codani, J. J., Connerton, I. F., Cummings, N. J., Daniel, R. A., Denizot, F., Devine, K. M., Dusterhoft, A., Ehrlich, S. D., Emmerson, P. T., Entian, K. D., Errington, J., Fabret, C., Ferrari, E., Foulger, D., Fritz, C., Fujita, M., Fujita, Y., Fuma, S., Galizzi, A., Galleron, N., Ghim, S. Y., Glaser, P., Goffeau, A., Golightly, E. J., Grandi, G., Guiseppi, G., Guy, B. J., Haga, K., Haiech, J., Harwood, C. R., Henaut, A., Hilbert, H., Holsappel, S., Hosono, S., Hullo, M. F., Itaya, M., Jones, L., Joris, B., Karamata, D., Kasahara, Y., Klaerr-Blanchard, M., Klein, C., Kobayashi, Y., Koetter, P., Koningstein, G., Krogh, S., Kumano, M., Kurita, K., Lapidus, A., Lardinois, S., Lauber, J., Lazarevic, V., Lee, S. M., Levine, A., Liu, H., Masuda, S., Mauel, C., Medigue, C., Medina, N., Mellado, R.P., Mizuno, M., Moestl, D., Nakai, S., Noback, M., Noone, D., O'Reilly, M., Ogawa, K., Ogiwara, A., Oudega, B., Park, S. H., Parro, V., Pohl, T. M., Portetelle, D., Porwollik, S., Prescott, A. M., Presecan, E., Pujic, P., Purnelle, B., Rapoport, G., Rey, M., Reynolds, S., Rieger, M., Rivolta, C., Rocha, E., Roche, B., Rose, M., Sadaie, Y., Sato, T., Scanlan, E., Schleich, S., Schroeter, R., Scoffone, F., Sekiguchi, J., Sekowska, A., Seror, S.J., Serror, P., Shin, B. S., Soldo, B., Sorokin, A., Tacconi, E., Takagi, T., Takahashi, H., Takemaru, K., Takeuchi, M., Tamakoshi, A., Tanaka, T., Terpstra, P., Tognoni, A., Tosato, V., Uchiyama, S., Vandenbol, M., Vannier, F., Vassarotti, A., Viari, A., Wambutt, R., Wedler, E., Wedler, H., Weitzenegger, T., Winters, P., Wipat, A., Yamamoto, H., Yamane, K., Yasumoto, K., Yata, K., Yoshida, K., Yoshikawa, H. F., Zumstein, E., Yoshikawa, H., and Danchin, A. 1997. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Nature 390:249-256. (Pubitemid 27513299)
-
(1997)
Nature
, vol.390
, Issue.6657
, pp. 249-256
-
-
Kunst, F.1
Ogasawara, N.2
Moszer, I.3
Albertini, A.M.4
Alloni, G.5
Azevedo, V.6
Bertero, M.G.7
Bessieres, P.8
Bolotin, A.9
Borchert, S.10
Borriss, R.11
Boursier, L.12
Brans, A.13
Braun, M.14
Brignell, S.C.15
Bron, S.16
Brouillet, S.17
Bruschi, C.V.18
Caldwell, B.19
Capuano, V.20
Carter, N.M.21
Choi, S.-K.22
Codani, J.-J.23
Connerton, I.F.24
Cummings, N.J.25
Daniel, R.A.26
Denizot, F.27
Devine, K.M.28
Dusterhoft, A.29
Ehrlich, S.D.30
Emmerson, P.T.31
Entian, K.D.32
Errington, J.33
Fabret, C.34
Ferrari, E.35
Foulger, D.36
Fritz, C.37
Fujita, M.38
Fujita, Y.39
Fuma, S.40
Galizzi, A.41
Galleron, N.42
Ghim, S.-Y.43
Glaser, P.44
Goffeau, A.45
Golightly, E.J.46
Grandi, G.47
Guiseppi, G.48
Guy, B.J.49
Haga, K.50
Haiech, J.51
Harwood, C.R.52
Henaut, A.53
Hilbert, H.54
Holsappel, S.55
Hosono, S.56
Hullo, M.-F.57
Itaya, M.58
Jones, L.59
Joris, B.60
Karamata, D.61
Kasahara, Y.62
Klaerr-Blanchard, M.63
Klein, C.64
Kobayashi, Y.65
Koetter, P.66
Koningstein, G.67
Krogh, S.68
Kumano, M.69
Kurita, K.70
Lapidus, A.71
Lardinois, S.72
Lauber, J.73
Lazarevic, V.74
Lee, S.-M.75
Levine, A.76
Liu, H.77
Masuda, S.78
Mauel, C.79
Medigue, C.80
Medina, N.81
Mellado, R.P.82
Mizuno, M.83
Moestl, D.84
Nakai, S.85
Noback, M.86
Noone, D.87
O'Reilly, M.88
Ogawa, K.89
Ogiwara, A.90
Oudega, B.91
Park, S.-H.92
Parro, V.93
Pohl, T.M.94
Portetelle, D.95
Porwollik, S.96
Prescott, A.M.97
Presecan, E.98
Pujic, P.99
more..
-
30
-
-
67650093032
-
Salmonella enterica serovar Typhimurium pathogenicity island 1-encoded type III secretion system translocases mediate intimate attachment to nonphagocytic cells
-
Lara-Tejero, M., and Galan, J. E. 2009. Salmonella enterica serovar Typhimurium pathogenicity island 1-encoded type III secretion system translocases mediate intimate attachment to nonphagocytic cells. Infect. Immun. 77:2635-2642.
-
(2009)
Infect. Immun.
, vol.77
, pp. 2635-2642
-
-
Lara-Tejero, M.1
Galan, J.E.2
-
31
-
-
70449669121
-
The targeting of plant cellular systems by injected type III effector proteins
-
Lewis, J. D., Guttman, D. S., and Desveaux, D. 2009. The targeting of plant cellular systems by injected type III effector proteins. Semin. Cell. Dev. Biol. 20:1055-1063.
-
(2009)
Semin. Cell. Dev. Biol.
, vol.20
, pp. 1055-1063
-
-
Lewis, J.D.1
Guttman, D.S.2
Desveaux, D.3
-
32
-
-
65649117685
-
DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
-
Librado, P., and Rozas, J. 2009. DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451-1452.
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
33
-
-
13144283628
-
A Modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints
-
Martin, D. P., Posada, D., Crandall, K. A., and Williamson, C. 2005. A Modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints. AIDS Res. Hum. Retroviruses 21:98-102.
-
(2005)
AIDS Res. Hum. Retroviruses
, vol.21
, pp. 98-102
-
-
Martin, D.P.1
Posada, D.2
Crandall, K.A.3
Williamson, C.4
-
34
-
-
59849112843
-
Salmonella takes control: Effector-driven manipulation of the host
-
McGhie, E. J., Brawn, L. C., Hume, P. J., Humphreys, D., and Koronakis, V. 2009. Salmonella takes control: Effector-driven manipulation of the host. Curr. Opin. Microbiol. 12:117-124.
-
(2009)
Curr. Opin. Microbiol.
, vol.12
, pp. 117-124
-
-
McGhie, E.J.1
Brawn, L.C.2
Hume, P.J.3
Humphreys, D.4
Koronakis, V.5
-
35
-
-
71049129377
-
Phylogenetic evidence for extensive horizontal gene transfer of type III secretion system genes among enterobacterial plant pathogens
-
Naum, M., Brown, E. W., and Mason-Gamer, R. J. 2009. Phylogenetic evidence for extensive horizontal gene transfer of type III secretion system genes among enterobacterial plant pathogens. Microbiology 155:3187-3199.
-
(2009)
Microbiology
, vol.155
, pp. 3187-3199
-
-
Naum, M.1
Brown, E.W.2
Mason-Gamer, R.J.3
-
36
-
-
0033007415
-
Bacterial genes induced within the nodule during the rhizobium-legume symbiosis
-
Oke, V., and Long, S. R. 1999. Bacterial genes induced within the nodule during the rhizobium-legume symbiosis. Mol. Microbiol. 32:837-849.
-
(1999)
Mol. Microbiol.
, vol.32
, pp. 837-849
-
-
Oke, V.1
Long, S.R.2
-
37
-
-
0033590220
-
Possible emergence of new geminiviruses by frequent recombination
-
Padidam, M., Sawyer, S., and Fauquet, C. M. 1999. Possible emergence of new geminiviruses by frequent recombination. Virology 265:218-225.
-
(1999)
Virology
, vol.265
, pp. 218-225
-
-
Padidam, M.1
Sawyer, S.2
Fauquet, C.M.3
-
38
-
-
75449104484
-
The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
-
Pieretti, I., Royer, M., Barbe, V., Carrere, S., Koebnik, R., Cociancich, S., Couloux, A., Darrasse, A., Gouzy, J., Jacques, M.-A., Lauber, E., Manceau, C., Mangenot, S., Poussier, S., Segurens, B., Szurek, B., Verdier, V., Arlat, M., and Rott, P. 2009. The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae. BMC Genomics 10:616.
-
(2009)
BMC Genomics
, vol.10
, pp. 616
-
-
Pieretti, I.1
Royer, M.2
Barbe, V.3
Carrere, S.4
Koebnik, R.5
Cociancich, S.6
Couloux, A.7
Darrasse, A.8
Gouzy, J.9
Jacques, M.-A.10
Lauber, E.11
Manceau, C.12
Mangenot, S.13
Poussier, S.14
Segurens, B.15
Szurek, B.16
Verdier, V.17
Arlat, M.18
Rott, P.19
-
39
-
-
0035923699
-
Evaluation of methods for detecting recombination from DNA sequences: Computer simulations
-
Posada, D., and Crandall, K. A. 2001. Evaluation of methods for detecting recombination from DNA sequences: Computer simulations. Proc. Natl. Acad. Sci. U.S.A. 98:13757-13762.
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 13757-13762
-
-
Posada, D.1
Crandall, K.A.2
-
40
-
-
34548514449
-
Substrate specificity-conferring regions of the nonribosomal peptide synthetase adenylation domains involved in albicidin pathotoxin biosynthesis are highly conserved within the species Xanthomonas albilineans
-
Renier, A., Vivien, E., Cociancich, S., Letourmy, P., Perrier, X., Rott, P. C., and Royer, M. 2007. Substrate specificity-conferring regions of the nonribosomal peptide synthetase adenylation domains involved in albicidin pathotoxin biosynthesis are highly conserved within the species Xanthomonas albilineans. Appl. Environ. Microbiol. 73:5523-5530.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 5523-5530
-
-
Renier, A.1
Vivien, E.2
Cociancich, S.3
Letourmy, P.4
Perrier, X.5
Rott, P.C.6
Royer, M.7
-
41
-
-
0037487608
-
Leaf scald
-
P. Rott, R. Bailey, J. Comstock, B. Croft, and A. Saumtally, eds. CIRAD-ISSCT, Montpellier, France
-
Rott, P., and Davis, M. 2000. Leaf scald. Pages 38-44 in: A Guide to Sugarcane Diseases. P. Rott, R. Bailey, J. Comstock, B. Croft, and A. Saumtally, eds. CIRAD-ISSCT, Montpellier, France.
-
(2000)
A Guide to Sugarcane Diseases
, pp. 38-44
-
-
Rott, P.1
Davis, M.2
-
42
-
-
0028151868
-
Population dynamics of Xanthomonas albilineans in sugarcane plants as determined with an antibiotic-resistant mutant
-
Rott, P., Abel, M., Soupa, D., Feldman, P., and Letourmy, P. 1994. Population dynamics of Xanthomonas albilineans in sugarcane plants as determined with an antibiotic-resistant mutant. Plant Dis. 78:241-247.
-
(1994)
Plant Dis.
, vol.78
, pp. 241-247
-
-
Rott, P.1
Abel, M.2
Soupa, D.3
Feldman, P.4
Letourmy, P.5
-
43
-
-
0030726972
-
Resistance to leaf scald disease is associated with limited colonization of sugarcane and wild relatives by Xanthomonas albilineans
-
Rott, P., Mohamed, I. S., Klett, P., Soupa, D., de Saint-Albin, A., Feldmann, P., and Letourmy, P. 1997. Resistance to leaf scald disease is associated with limited colonization of sugarcane and wild relatives by Xanthomonas albilineans. Phytopathology 87:1202-1213.
-
(1997)
Phytopathology
, vol.87
, pp. 1202-1213
-
-
Rott, P.1
Mohamed, I.S.2
Klett, P.3
Soupa, D.4
De Saint-Albin, A.5
Feldmann, P.6
Letourmy, P.7
-
44
-
-
12144291588
-
Albicidin pathotoxin produced by Xanthomonas albilineans is encoded by three large PKS and NRPS gene present in a gene cluster also containing several putative modifying, regulatory, and resistance genes
-
Royer, M., Costet, L., Vivien, E., Bes, M., Cousin, A., Damais, A., Pieretti, I., Savin, A., Megessier, S., Viard, M., Frutos, R., Gabriel, D., and Rott, P. 2004. Albicidin pathotoxin produced by Xanthomonas albilineans is encoded by three large PKS and NRPS gene present in a gene cluster also containing several putative modifying, regulatory, and resistance genes. Mol. Plant-Microbe Interact. 17:414-427.
-
(2004)
Mol. Plant-microbe Interact.
, vol.17
, pp. 414-427
-
-
Royer, M.1
Costet, L.2
Vivien, E.3
Bes, M.4
Cousin, A.5
Damais, A.6
Pieretti, I.7
Savin, A.8
Megessier, S.9
Viard, M.10
Frutos, R.11
Gabriel, D.12
Rott, P.13
-
45
-
-
0004318743
-
-
D. Brenner, N. Krieg, J. Staley, and G. Garrity, eds. Springer, New York
-
Saddler, G., and Bradbury, J. 2005. Bergey's Manual of Systematic Bacteriology, Vol. 2. D. Brenner, N. Krieg, J. Staley, and G. Garrity, eds. Springer, New York.
-
(2005)
Bergey's Manual of Systematic Bacteriology
, vol.2
-
-
Saddler, G.1
Bradbury, J.2
-
46
-
-
48649098738
-
Manipulation of the eukaryotic transcriptional machinery by bacterial pathogens
-
Saijo, Y., and Schulze-Lefert, P. 2008. Manipulation of the eukaryotic transcriptional machinery by bacterial pathogens. Cell Host Microbe 4:96-99.
-
(2008)
Cell Host Microbe
, vol.4
, pp. 96-99
-
-
Saijo, Y.1
Schulze-Lefert, P.2
-
47
-
-
0038162910
-
Evolution of aerial infection of leaf scald caused by Xanthomonas albilineans (Ashby) Dowson in sugarcane
-
J. Cock and T. Brekelbaum, eds. International Society of Sugarcane Technologists, Cartagena, Colombia
-
Saumtally, S., Medan, H., and Autrey, L. 1996. Evolution of aerial infection of leaf scald caused by Xanthomonas albilineans (Ashby) Dowson in sugarcane. Pages 493-497 in: Proc. XXII Congress. J. Cock and T. Brekelbaum, eds. International Society of Sugarcane Technologists, Cartagena, Colombia.
-
(1996)
Proc. XXII Congress
, pp. 493-497
-
-
Saumtally, S.1
Medan, H.2
Autrey, L.3
-
48
-
-
77949692062
-
Complete genome sequence of the plant pathogen Erwinia amylovora strain ATCC 49946
-
Sebaihia, M., Bocsanczy, A. M., Biehl, B. S., Quail, M. A., Perna, N. T., Glasner, J. D., DeClerck, G. A., Cartinhour, S., Schneider, D. J., Bentley, S. D., Parkhill, J., and Beer, S. V. 2010. Complete genome sequence of the plant pathogen Erwinia amylovora strain ATCC 49946. J. Bacteriol. 192:2020-2021.
-
(2010)
J. Bacteriol.
, vol.192
, pp. 2020-2021
-
-
Sebaihia, M.1
Bocsanczy, A.M.2
Biehl, B.S.3
Quail, M.A.4
Perna, N.T.5
Glasner, J.D.6
Declerck, G.A.7
Cartinhour, S.8
Schneider, D.J.9
Bentley, S.D.10
Parkhill, J.11
Beer, S.V.12
-
49
-
-
77949295507
-
Complete genome sequence of the fire blight pathogen Erwinia amylovora CFBP 1430 and comparison to other Erwinia spp
-
Smits, T. H. M., Rezzonico, F., Kamber, T., Blom, J., Goesmann, A., Frey, J. E., and Duffy, B. 2010. Complete genome sequence of the fire blight pathogen Erwinia amylovora CFBP 1430 and comparison to other Erwinia spp. Mol. Plant-Microbe Interact. 23:384-393.
-
(2010)
Mol. Plant-microbe Interact.
, vol.23
, pp. 384-393
-
-
Smits, T.H.M.1
Rezzonico, F.2
Kamber, T.3
Blom, J.4
Goesmann, A.5
Frey, J.E.6
Duffy, B.7
-
50
-
-
0036441427
-
An Inv/Mxi-Spa-like type III protein secretion system in Burkholderia pseudomallei modulates intracellular behaviour of the pathogen
-
Stevens, M. P., Wood, M. W., Taylor, L. A., Monaghan, P., Hawes, P., Jones, P. W., Wallis, T. S., and Galyov, E. E. 2002. An Inv/Mxi-Spa-like type III protein secretion system in Burkholderia pseudomallei modulates intracellular behaviour of the pathogen. Mol. Microbiol. 46:649-659.
-
(2002)
Mol. Microbiol.
, vol.46
, pp. 649-659
-
-
Stevens, M.P.1
Wood, M.W.2
Taylor, L.A.3
Monaghan, P.4
Hawes, P.5
Jones, P.W.6
Wallis, T.S.7
Galyov, E.E.8
-
51
-
-
0035061103
-
Complete DNA sequence and analysis of the large virulence plasmid of Shigella flexneri
-
Venkatesan, M. M., Goldberg, M. B., Rose, D. J., Grotbeck, E. J., Burland, V., and Blattner, F. R. 2001. Complete DNA sequence and analysis of the large virulence plasmid of Shigella flexneri. Infect. Immun. 69:3271-3285.
-
(2001)
Infect. Immun.
, vol.69
, pp. 3271-3285
-
-
Venkatesan, M.M.1
Goldberg, M.B.2
Rose, D.J.3
Grotbeck, E.J.4
Burland, V.5
Blattner, F.R.6
-
52
-
-
0030683599
-
PAML: A programme package for phylogenetic analysis by maximum likelihood
-
Yang, Z. 1997. PAML: A programme package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13:555-556.
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
53
-
-
0031897964
-
Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution
-
Yang, Z. 1998. Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution. Mol. Biol. Evol. 15:568-573.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 568-573
-
-
Yang, Z.1
-
54
-
-
0031960185
-
Synonymous and nonsynonymous rate variation in nuclear genes of mammals
-
Yang, Z., and Nielsen, R. 1998. Synonymous and nonsynonymous rate variation in nuclear genes of mammals. J. Mol. Evol. 46:409-418.
-
(1998)
J. Mol. Evol.
, vol.46
, pp. 409-418
-
-
Yang, Z.1
Nielsen, R.2
-
55
-
-
0242571576
-
Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene loci and calibration points, with application to a radiation of cute-looking mouse lemur species
-
Yang, Z., and Yoder, A. D. 2003. Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene loci and calibration points, with application to a radiation of cute-looking mouse lemur species. Syst. Biol. 52:705-716.
-
(2003)
Syst. Biol.
, vol.52
, pp. 705-716
-
-
Yang, Z.1
Yoder, A.D.2
-
56
-
-
0033933640
-
Estimation of primate speciation dates using local molecular clocks
-
Yoder, A. D., and Yang, Z. 2000. Estimation of primate speciation dates using local molecular clocks. Mol. Biol. Evol. 17:1081-1090.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 1081-1090
-
-
Yoder, A.D.1
Yang, Z.2
-
58
-
-
78651311159
-
-
ClustalW2 database: www.ebi.ac.uk/Tools/clustalw2/index.html
-
ClustalW2 Database
-
-
-
59
-
-
78651273471
-
-
DnaSP (DNA Sequence Polymorphism) website: www.ub.es/dnasp
-
-
-
-
60
-
-
84872408985
-
-
eu.idtdna.com/analyzer/applications/oligoanalyzer/Default.aspx
-
Integrated DNA Technologies database: eu.idtdna.com/analyzer/ applications/oligoanalyzer/Default.aspx
-
Integrated DNA Technologies Database
-
-
-
61
-
-
78651272026
-
-
biotools.umassmed.edu/bioapps/primer3-www.cgi
-
The Primer 3 website: biotools.umassmed.edu/bioapps/primer3-www.cgi
-
-
-
|