메뉴 건너뛰기




Volumn 155, Issue 10, 2009, Pages 3187-3199

Phylogenetic evidence for extensive horizontal gene transfer of type III secretion system genes among enterobacterial plant pathogens

Author keywords

[No Author keywords available]

Indexed keywords

AMINO TERMINAL SEQUENCE; ARTICLE; BACTERIAL STRAIN; BACTERIAL VIRULENCE; BETAPROTEOBACTERIA; CARBOXY TERMINAL SEQUENCE; CONTROLLED STUDY; ENTEROBACTERIACEAE; ERWINIA; GENE LOCUS; GENE SEQUENCE; HORIZONTAL GENE TRANSFER; HOUSEKEEPING GENE; NONHUMAN; NUCLEOTIDE SEQUENCE; PANTOEA; PECTOBACTERIUM; PHYLOGENY; PLANT PATHOGEN INTERACTION; PRIORITY JOURNAL; PROTEIN DOMAIN; TYPE III SECRETION SYSTEM;

EID: 71049129377     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/mic.0.029892-0     Document Type: Article
Times cited : (29)

References (41)
  • 1
    • 0033102274 scopus 로고    scopus 로고
    • Congruence among mammalian mitochondrial genes
    • Allard, M. W., Farris, J. S. & Carpenter, J. (1999). Congruence among mammalian mitochondrial genes. Cladistics 15, 75-84.
    • (1999) Cladistics , vol.15 , pp. 75-84
    • Allard, M.W.1    Farris, J.S.2    Carpenter, J.3
  • 2
    • 0029998799 scopus 로고    scopus 로고
    • Bogdanove, A. J., Beer, S. V., Bonas, U., Boucher, C. A., Collmer, A., Coplin, D. L., Cornelis, G. R., Huang, H. C., Hutcheson, S. W. & other authors (1996). Unified nomenclature for broadly conserved hrp genes of phytopathogenic bacteria. Mol Microbiol 20, 681-683.
    • Bogdanove, A. J., Beer, S. V., Bonas, U., Boucher, C. A., Collmer, A., Coplin, D. L., Cornelis, G. R., Huang, H. C., Hutcheson, S. W. & other authors (1996). Unified nomenclature for broadly conserved hrp genes of phytopathogenic bacteria. Mol Microbiol 20, 681-683.
  • 3
    • 0001927915 scopus 로고    scopus 로고
    • Phylogenetic characterization of the eubacterial lcrD gene family: Molecular evolutionary aspects of pathogen induced hypersensitivity in plants
    • Brown, E. W., Allard, M. W. & van der Zwet, T. (1998). Phylogenetic characterization of the eubacterial lcrD gene family: molecular evolutionary aspects of pathogen induced hypersensitivity in plants. Cladistics 14, 45-62.
    • (1998) Cladistics , vol.14 , pp. 45-62
    • Brown, E.W.1    Allard, M.W.2    van der Zwet, T.3
  • 4
    • 0034521790 scopus 로고    scopus 로고
    • Phylogenetic relationships of necrogenic Erwinia and Brenneria species as revealed by glyceraldehyde-3-phosphate dehydrogenase gene sequences
    • Brown, E. W., Davis, R. M., Gouk, C. & van der Zwet, T. (2000). Phylogenetic relationships of necrogenic Erwinia and Brenneria species as revealed by glyceraldehyde-3-phosphate dehydrogenase gene sequences. Int J Syst Evol Microbiol 50, 2057-2068.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 2057-2068
    • Brown, E.W.1    Davis, R.M.2    Gouk, C.3    van der Zwet, T.4
  • 5
    • 33646672447 scopus 로고    scopus 로고
    • Identification of genomic islands in six plant pathogens
    • Chen, L. L. (2006). Identification of genomic islands in six plant pathogens. Gene 374, 134-141.
    • (2006) Gene , vol.374 , pp. 134-141
    • Chen, L.L.1
  • 6
    • 0000725686 scopus 로고    scopus 로고
    • The role of genetic exchange in bacterial evolution
    • Cohan, F. M. (1996). The role of genetic exchange in bacterial evolution. ASM News 62, 631-636.
    • (1996) ASM News , vol.62 , pp. 631-636
    • Cohan, F.M.1
  • 7
    • 33749554389 scopus 로고    scopus 로고
    • The evolutionary origin of Xanthomonadales genomes and the nature of the horizontal gene transfer process
    • Comas, I., Moya, A., Azad, R. K., Lawrence, J. G. & Gonzalez-Candelas, F. (2006). The evolutionary origin of Xanthomonadales genomes and the nature of the horizontal gene transfer process. Mol Biol Evol 23, 2049-2057.
    • (2006) Mol Biol Evol , vol.23 , pp. 2049-2057
    • Comas, I.1    Moya, A.2    Azad, R.K.3    Lawrence, J.G.4    Gonzalez-Candelas, F.5
  • 8
    • 33746669364 scopus 로고    scopus 로고
    • Molecular interactions between bacterial symbionts and their hosts
    • Dale, C. & Moran, N. A. (2006). Molecular interactions between bacterial symbionts and their hosts. Cell 126, 453-465.
    • (2006) Cell , vol.126 , pp. 453-465
    • Dale, C.1    Moran, N.A.2
  • 9
    • 0025785461 scopus 로고
    • Recent advances in the polymerase chain reaction
    • Ehrlich, H. A., Gelford, D. & Snisky, J. J. (1991). Recent advances in the polymerase chain reaction. Science 252, 1643.
    • (1991) Science , vol.252 , pp. 1643
    • Ehrlich, H.A.1    Gelford, D.2    Snisky, J.J.3
  • 11
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 12
    • 0030615203 scopus 로고    scopus 로고
    • Evolution of the mitochondrial cytochrome oxidase II gene in Collembola
    • Frati, F., Simon, C., Sullivan, J. & Swofford, D. L. (1997). Evolution of the mitochondrial cytochrome oxidase II gene in Collembola. J Mol Evol 44, 145-158.
    • (1997) J Mol Evol , vol.44 , pp. 145-158
    • Frati, F.1    Simon, C.2    Sullivan, J.3    Swofford, D.L.4
  • 13
    • 0033591446 scopus 로고    scopus 로고
    • Type III secretion machines: Bacterial devices for protein delivery into host cells
    • Galan, J. E. & Collmer, A. (1999). Type III secretion machines: bacterial devices for protein delivery into host cells. Science 284, 1322-1328.
    • (1999) Science , vol.284 , pp. 1322-1328
    • Galan, J.E.1    Collmer, A.2
  • 14
    • 0141430076 scopus 로고    scopus 로고
    • Bacterial type III secretion systems are ancient and evolved by multiple horizontal-transfer events
    • Gophna, U., Ron, E. Z. & Graur, D. (2003). Bacterial type III secretion systems are ancient and evolved by multiple horizontal-transfer events. Gene 312, 151-163.
    • (2003) Gene , vol.312 , pp. 151-163
    • Gophna, U.1    Ron, E.Z.2    Graur, D.3
  • 16
    • 0030606233 scopus 로고    scopus 로고
    • Pathogenicity islands: Bacterial evolution in quantum leaps
    • Groisman, E. A. & Ochman, H. (1996). Pathogenicity islands: bacterial evolution in quantum leaps. Cell 87, 791-794.
    • (1996) Cell , vol.87 , pp. 791-794
    • Groisman, E.A.1    Ochman, H.2
  • 17
    • 0030901705 scopus 로고    scopus 로고
    • Pathogenicity islands of virulent bacteria: Structure, function, and impact on microbial evolution
    • Hacker, J., Blum-Oehler, G., Muhldorfer, I. & Tschape, H. (1997). Pathogenicity islands of virulent bacteria: structure, function, and impact on microbial evolution. Mol Microbiol 23, 1089-1097.
    • (1997) Mol Microbiol , vol.23 , pp. 1089-1097
    • Hacker, J.1    Blum-Oehler, G.2    Muhldorfer, I.3    Tschape, H.4
  • 19
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck, J. P. & Ronquist, F. (2001). MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17, 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 21
    • 71049125421 scopus 로고    scopus 로고
    • Lelliott, R. A. & Dickey, R. S. (1985). Genus VII. Erwinia. In Bergey's Manual of Systematic Bacteriology, pp. 469-476. Edited by N. R. Krieg & J. G. Holt. New York: Williams and Wilkins.
    • Lelliott, R. A. & Dickey, R. S. (1985). Genus VII. Erwinia. In Bergey's Manual of Systematic Bacteriology, pp. 469-476. Edited by N. R. Krieg & J. G. Holt. New York: Williams and Wilkins.
  • 22
    • 0035846909 scopus 로고    scopus 로고
    • Cytolysin-mediated translocation (CMT): A functional equivalent of type III secretion in Gram-positive bacteria
    • Madden, J. C., Ruiz, N. & Caparon, M. (2001). Cytolysin-mediated translocation (CMT): a functional equivalent of type III secretion in Gram-positive bacteria. Cell 104, 143-152.
    • (2001) Cell , vol.104 , pp. 143-152
    • Madden, J.C.1    Ruiz, N.2    Caparon, M.3
  • 24
    • 1642401473 scopus 로고    scopus 로고
    • Reticulate evolution, introgression, and intertribal gene capture in an allohexaploid grass
    • Mason-Gamer, R. J. (2004). Reticulate evolution, introgression, and intertribal gene capture in an allohexaploid grass. Syst Biol 53, 25-37.
    • (2004) Syst Biol , vol.53 , pp. 25-37
    • Mason-Gamer, R.J.1
  • 26
    • 46649084802 scopus 로고    scopus 로고
    • Is 16S rDNA a reliable phylogenetic marker to characterize relationships below the family level in the Enterobacteriaceae?
    • Naum, M., Mason-Gamer, R. J. & Brown, E. W. (2008). Is 16S rDNA a reliable phylogenetic marker to characterize relationships below the family level in the Enterobacteriaceae? J Mol Evol 66, 630-642.
    • (2008) J Mol Evol , vol.66 , pp. 630-642
    • Naum, M.1    Mason-Gamer, R.J.2    Brown, E.W.3
  • 27
    • 17644391098 scopus 로고    scopus 로고
    • The Hrp pathogenicity island of Erwinia amylovora and identification of three novel genes required for systemic infection
    • Oh, C. S., Kim, J. F. & Beer, S. V. (2005). The Hrp pathogenicity island of Erwinia amylovora and identification of three novel genes required for systemic infection. Mol Plant Pathol 6, 125-138.
    • (2005) Mol Plant Pathol , vol.6 , pp. 125-138
    • Oh, C.S.1    Kim, J.F.2    Beer, S.V.3
  • 28
    • 0033529826 scopus 로고    scopus 로고
    • The Xanthomonas Hrp type III system secretes proteins from plant and mammalian bacterial pathogens
    • Rossier, O., Wengelnik, K., Hahn, K. & Bonas, U. (1999). The Xanthomonas Hrp type III system secretes proteins from plant and mammalian bacterial pathogens. Proc Natl Acad Sci U S A 96, 9368-9373.
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 9368-9373
    • Rossier, O.1    Wengelnik, K.2    Hahn, K.3    Bonas, U.4
  • 29
    • 33745493624 scopus 로고    scopus 로고
    • Inferring the root of Isoetes: Exploring alternatives in the absence of an acceptable outgroup
    • Schuettpelz, E. & Hoot, S. B. (2006). Inferring the root of Isoetes: exploring alternatives in the absence of an acceptable outgroup. Syst Bot 31, 258-270.
    • (2006) Syst Bot , vol.31 , pp. 258-270
    • Schuettpelz, E.1    Hoot, S.B.2
  • 31
    • 0015441966 scopus 로고
    • The genus Erwinia: Enterobacteria pathogenic to plants and animals
    • Starr, M. P. & Chatterjee, A. K. (1972). The genus Erwinia: enterobacteria pathogenic to plants and animals. Annu Rev Microbiol 26, 389-426.
    • (1972) Annu Rev Microbiol , vol.26 , pp. 389-426
    • Starr, M.P.1    Chatterjee, A.K.2
  • 32
    • 0031224772 scopus 로고    scopus 로고
    • Phylogeography and molecular systematics of the Peromyscus aztecus species group (Rodentia: Muridae) inferred using parsimony and likelihood
    • Sullivan, J., Markert, J. A. & Kilpatrick, C. W. (1997). Phylogeography and molecular systematics of the Peromyscus aztecus species group (Rodentia: Muridae) inferred using parsimony and likelihood. Syst Biol 46, 426-440.
    • (1997) Syst Biol , vol.46 , pp. 426-440
    • Sullivan, J.1    Markert, J.A.2    Kilpatrick, C.W.3
  • 33
    • 71049126276 scopus 로고    scopus 로고
    • Swofford, D. L. (2001). PAUP*. Phylogenetic analysis using parsimony (*and other methods), version 4b10. Sunderland, MA: Sinauer Associates.
    • Swofford, D. L. (2001). PAUP*. Phylogenetic analysis using parsimony (*and other methods), version 4b10. Sunderland, MA: Sinauer Associates.
  • 34
    • 0001336205 scopus 로고    scopus 로고
    • Phylogenetic inference
    • Edited by D. M. Hillis & C. Moritz. Sunderland, MA: Sinauer Associates
    • Swofford, D. L., Olsen, G. J., Waddell, P. J. & Hillis, D. M. (1996). Phylogenetic inference. In Molecular Systematics, pp. 407-514. Edited by D. M. Hillis & C. Moritz. Sunderland, MA: Sinauer Associates.
    • (1996) Molecular Systematics , pp. 407-514
    • Swofford, D.L.1    Olsen, G.J.2    Waddell, P.J.3    Hillis, D.M.4
  • 36
    • 0027968068 scopus 로고
    • CLUSTAL version W: A novel multiple sequence alignment program
    • Thompson, J. D., Higgins, D. & Gibson, T. J. (1994). CLUSTAL version W: a novel multiple sequence alignment program. Nucleic Acids Res 22, 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.2    Gibson, T.J.3
  • 37
    • 33748959178 scopus 로고    scopus 로고
    • Comparative genomics reveals what makes an enterobacterial plant pathogen
    • Toth, I. K., Pritchard, L. & Birch, P. R. J. (2006). Comparative genomics reveals what makes an enterobacterial plant pathogen. Annu Rev Phytopathol 44, 305-336.
    • (2006) Annu Rev Phytopathol , vol.44 , pp. 305-336
    • Toth, I.K.1    Pritchard, L.2    Birch, P.R.J.3
  • 38
    • 0003291816 scopus 로고
    • Fire Blight - its Nature, Prevention, and Control: A Practical Guide to Integrated Disease Management
    • number, 83 pp
    • van der Zwet, T. & Beer, S. V. (1995). Fire Blight - its Nature, Prevention, and Control: a Practical Guide to Integrated Disease Management. USDA Agricultural Information Bulletin number 631, 83 pp.
    • (1995) USDA Agricultural Information Bulletin , vol.631
    • van der Zwet, T.1    Beer, S.V.2
  • 39
    • 0029469716 scopus 로고
    • Maximum-likelihood trees from DNA sequences: A peculiar statistical estimation problem
    • Yang, Z., Goldman, N. & Friday, A. (1995). Maximum-likelihood trees from DNA sequences: a peculiar statistical estimation problem. Syst Biol 44, 384-399.
    • (1995) Syst Biol , vol.44 , pp. 384-399
    • Yang, Z.1    Goldman, N.2    Friday, A.3
  • 40
    • 34250704824 scopus 로고    scopus 로고
    • Relationships of plant pathogenic enterobacteria based on partial atpD, carA, and recA as individual and concatenated nucleotide and peptide sequences
    • Young, J. M. & Park, D. C. (2007). Relationships of plant pathogenic enterobacteria based on partial atpD, carA, and recA as individual and concatenated nucleotide and peptide sequences. Syst Appl Microbiol 30, 343-354.
    • (2007) Syst Appl Microbiol , vol.30 , pp. 343-354
    • Young, J.M.1    Park, D.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.