메뉴 건너뛰기




Volumn 25, Issue 6, 2010, Pages 561-568

Gene expression profiling in primary mouse hepatocytes discriminates true from false-positive genotoxic compounds

Author keywords

[No Author keywords available]

Indexed keywords

4 NITRO 1,2 PHENYLENEDIAMINE; 8 QUINOLINOL; ACRYLIC ACID ETHYL ESTER; AFLATOXIN B1; ANTHRANILIC ACID; BENZO[A]PYRENE; CURCUMIN; DIMETHYLBENZ[A]ANTHRACENE; DIMETHYLNITROSAMINE; DNA; HISTONE H2AX; MITOMYCIN C; N (2 FLUORENYL)ACETAMIDE; PHENACETIN; QUERCETIN; RESORCINOL; TOXIC SUBSTANCE;

EID: 78149369706     PISSN: 02678357     EISSN: 14643804     Source Type: Journal    
DOI: 10.1093/mutage/geq040     Document Type: Article
Times cited : (30)

References (49)
  • 1
    • 46249118580 scopus 로고    scopus 로고
    • Discriminating the molecular basis of hepatotoxicity using the large-scale characteristic molecular signatures of toxicants by expression profiling analysis
    • Eun, J. W., Ryu, S. Y., Noh, J. H. et al. (2008) Discriminating the molecular basis of hepatotoxicity using the large-scale characteristic molecular signatures of toxicants by expression profiling analysis. Toxicology, 249, 176-183.
    • (2008) Toxicology , vol.249 , pp. 176-183
    • Eun, J.W.1    Ryu, S.Y.2    Noh, J.H.3
  • 2
    • 40949144403 scopus 로고    scopus 로고
    • Prediction of non-genotoxic carcinogenesis in rats using changes in gene expression following acute dosing
    • Nioi, P., Pardo, I. D., Sherratt, P. J. and Snyder, R. D. (2008) Prediction of non-genotoxic carcinogenesis in rats using changes in gene expression following acute dosing. Chem. Biol. Interact., 172, 206-215.
    • (2008) Chem. Biol. Interact. , vol.172 , pp. 206-215
    • Nioi, P.1    Pardo, I.D.2    Sherratt, P.J.3    Snyder, R.D.4
  • 3
    • 21544473568 scopus 로고    scopus 로고
    • Evaluation of the ability of a battery of three in vitro genotoxicity tests to discriminate rodent carcinogens and non-carcinogens I. Sensitivity, specificity and relative predictivity
    • Kirkland, D., Aardema, M., Henderson, L. and Muller, L. (2005) Evaluation of the ability of a battery of three in vitro genotoxicity tests to discriminate rodent carcinogens and non-carcinogens I. Sensitivity, specificity and relative predictivity. Mutat. Res., 584, 1-256.
    • (2005) Mutat. Res. , vol.584 , pp. 1-256
    • Kirkland, D.1    Aardema, M.2    Henderson, L.3    Muller, L.4
  • 4
    • 67650869760 scopus 로고    scopus 로고
    • Mutagenicity testing for chemical risk assessment: Update of the WHO/IPCS Harmonized Scheme
    • Eastmond, D. A., Hartwig, A., Anderson, D. et al. (2009) Mutagenicity testing for chemical risk assessment: update of the WHO/IPCS Harmonized Scheme. Mutagenesis, 24, 341-349.
    • (2009) Mutagenesis , vol.24 , pp. 341-349
    • Eastmond, D.A.1    Hartwig, A.2    Anderson, D.3
  • 5
    • 33746309471 scopus 로고    scopus 로고
    • High-specificity and highsensitivity genotoxicity assessment in a human cell line: Validation of the GreenScreen HC GADD45a-GFP genotoxicity assay
    • Hastwell, P. W., Chai, L. L., Roberts, K. J., Webster, T. W., Harvey, J. S., Rees, R. W. and Walmsley, R. M. (2006) High-specificity and highsensitivity genotoxicity assessment in a human cell line: validation of the GreenScreen HC GADD45a-GFP genotoxicity assay. Mutat. Res., 607, 160-175.
    • (2006) Mutat. Res. , vol.607 , pp. 160-175
    • Hastwell, P.W.1    Chai, L.L.2    Roberts, K.J.3    Webster, T.W.4    Harvey, J.S.5    Rees, R.W.6    Walmsley, R.M.7
  • 6
    • 0018652483 scopus 로고
    • Intestinal absorption and metabolism of xenobiotics
    • Chhabra, R. S. (1979) Intestinal absorption and metabolism of xenobiotics. Environ. Health Perspect., 33, 61-69.
    • (1979) Environ. Health Perspect. , vol.33 , pp. 61-69
    • Chhabra, R.S.1
  • 7
    • 0027966449 scopus 로고
    • The practical applicability of hepatocyte cultures in routine testing. EcVam workshop report 1
    • Blaauboer, B. J., Boobis, A. R., Castell, J. V. et al. (1994) The practical applicability of hepatocyte cultures in routine testing. EcVam workshop report 1. Altern. Lab. Anim., 22, 231-241.
    • (1994) Altern. Lab. Anim. , vol.22 , pp. 231-241
    • Blaauboer, B.J.1    Boobis, A.R.2    Castell, J.V.3
  • 9
    • 34247128690 scopus 로고    scopus 로고
    • Characterization of DNA reactive and non-DNA reactive anticancer drugs by gene expression profiling
    • Le Fevre, A. C., Boitier, E., Marchandeau, J. P., Sarasin, A. and Thybaud, V. (2007) Characterization of DNA reactive and non-DNA reactive anticancer drugs by gene expression profiling. Mutat. Res., 619, 16-29.
    • (2007) Mutat. Res. , vol.619 , pp. 16-29
    • Le Fevre, A.C.1    Boitier, E.2    Marchandeau, J.P.3    Sarasin, A.4    Thybaud, V.5
  • 10
  • 11
    • 61449164867 scopus 로고    scopus 로고
    • Application of toxicogenomics to study mechanisms of genotoxicity and carcinogenicity
    • Ellinger-Ziegelbauer, H., Aubrecht, J., Kleinjans, J. C. and Ahr, H. J. (2009) Application of toxicogenomics to study mechanisms of genotoxicity and carcinogenicity. Toxicol. Lett., 186, 36-44.
    • (2009) Toxicol. Lett. , vol.186 , pp. 36-44
    • Ellinger-Ziegelbauer, H.1    Aubrecht, J.2    Kleinjans, J.C.3    Ahr, H.J.4
  • 12
    • 37149025669 scopus 로고    scopus 로고
    • Prediction of a carcinogenic potential of rat hepatocarcinogens using toxicogenomics analysis of short-term in vivo studies
    • Ellinger-Ziegelbauer, H., Gmuender, H., Bandenburg, A. and Ahr, H. J. (2007) Prediction of a carcinogenic potential of rat hepatocarcinogens using toxicogenomics analysis of short-term in vivo studies. Mutat. Res., 637, 23-39.
    • (2007) Mutat. Res. , vol.637 , pp. 23-39
    • Ellinger-Ziegelbauer, H.1    Gmuender, H.2    Bandenburg, A.3    Ahr, H.J.4
  • 13
    • 1642504808 scopus 로고    scopus 로고
    • Characteristic expression profiles induced by genotoxic carcinogens in rat liver
    • Ellinger-Ziegelbauer, H., Stuart, B., Wahle, B., Bomann, W. and Ahr, H. J. (2004) Characteristic expression profiles induced by genotoxic carcinogens in rat liver. Toxicol. Sci., 77, 19-34.
    • (2004) Toxicol. Sci. , vol.77 , pp. 19-34
    • Ellinger-Ziegelbauer, H.1    Stuart, B.2    Wahle, B.3    Bomann, W.4    Ahr, H.J.5
  • 14
    • 19544375991 scopus 로고    scopus 로고
    • Comparison of the expression profiles induced by genotoxic and nongenotoxic carcinogens in rat liver
    • Ellinger-Ziegelbauer, H., Stuart, B., Wahle, B., Bomann, W. and Ahr, H. J. (2005) Comparison of the expression profiles induced by genotoxic and nongenotoxic carcinogens in rat liver. Mutat. Res., 575, 61-84.
    • (2005) Mutat. Res. , vol.575 , pp. 61-84
    • Ellinger-Ziegelbauer, H.1    Stuart, B.2    Wahle, B.3    Bomann, W.4    Ahr, H.J.5
  • 15
    • 74949142247 scopus 로고    scopus 로고
    • Discrimination for genotoxic and nongenotoxic carcinogens by gene expression profiling in primary mouse hepatocytes improves with exposure time
    • Mathijs, K., Brauers, K. J., Jennen, D. G., Boorsma, A., van Herwijnen, M. H., Gottschalk, R. W., Kleinjans, J. C. and van Delft, J. H. (2009) Discrimination for genotoxic and nongenotoxic carcinogens by gene expression profiling in primary mouse hepatocytes improves with exposure time. Toxicol. Sci., 112, 374-384.
    • (2009) Toxicol. Sci. , vol.112 , pp. 374-384
    • Mathijs, K.1    Brauers, K.J.2    Jennen, D.G.3    Boorsma, A.4    Van Herwijnen, M.H.5    Gottschalk, R.W.6    Kleinjans, J.C.7    Van Delft, J.H.8
  • 17
    • 1542563409 scopus 로고    scopus 로고
    • Initial sequencing and comparative analysis of the mouse genome
    • Waterston, R. H., Lindblad-Toh, K., Birney, E. et al. (2002) Initial sequencing and comparative analysis of the mouse genome. Nature, 420, 520-562.
    • (2002) Nature , vol.420 , pp. 520-562
    • Waterston, R.H.1    Lindblad-Toh, K.2    Birney, E.3
  • 18
    • 47749135851 scopus 로고    scopus 로고
    • Histone H2AX phosphorylation independent of ATM after X-irradiation in mouse liver and kidney in situ
    • Koike, M., Mashino, M., Sugasawa, J. and Koike, A. (2008) Histone H2AX phosphorylation independent of ATM after X-irradiation in mouse liver and kidney in situ. J. Radiat. Res. (Tokyo), 49, 445-449.
    • (2008) J. Radiat. Res. (Tokyo) , vol.49 , pp. 445-449
    • Koike, M.1    Mashino, M.2    Sugasawa, J.3    Koike, A.4
  • 19
    • 0032861343 scopus 로고    scopus 로고
    • Megabase chromatin domains involved in DNA double-strand breaks in vivo
    • Rogakou, E. P., Boon, C., Redon, C. and Bonner, W. M. (1999) Megabase chromatin domains involved in DNA double-strand breaks in vivo. J. Cell Biol., 146, 905-916.
    • (1999) J. Cell Biol. , vol.146 , pp. 905-916
    • Rogakou, E.P.1    Boon, C.2    Redon, C.3    Bonner, W.M.4
  • 20
    • 0032489520 scopus 로고    scopus 로고
    • DNA double-stranded breaks induce histone H2AX phosphorylation on serine 139
    • Rogakou, E. P., Pilch, D. R., Orr, A. H., Ivanova, V. S. and Bonner, W. M. (1998) DNA double-stranded breaks induce histone H2AX phosphorylation on serine 139. J. Biol. Chem., 273, 5858-5868.
    • (1998) J. Biol. Chem. , vol.273 , pp. 5858-5868
    • Rogakou, E.P.1    Pilch, D.R.2    Orr, A.H.3    Ivanova, V.S.4    Bonner, W.M.5
  • 21
    • 0017101039 scopus 로고
    • Preparation of isolated rat liver cells
    • Seglen, P. O. (1976) Preparation of isolated rat liver cells. Methods Cell Biol., 13, 29-83.
    • (1976) Methods Cell Biol. , vol.13 , pp. 29-83
    • Seglen, P.O.1
  • 22
    • 0033999998 scopus 로고    scopus 로고
    • Development and utilization of primary hepatocyte culture systems to evaluate metabolism, DNA binding, and DNA repair of xenobiotics
    • Casciano, D. A. (2000) Development and utilization of primary hepatocyte culture systems to evaluate metabolism, DNA binding, and DNA repair of xenobiotics. Drug Metab. Rev., 32, 1-13.
    • (2000) Drug Metab. Rev. , vol.32 , pp. 1-13
    • Casciano, D.A.1
  • 23
    • 0642284624 scopus 로고    scopus 로고
    • Collagen-gel cultures of rat hepatocytes: Collagen-gel sandwich and immobilization cultures
    • Beken, S., Vanhaecke, T., De Smet, K., Pauwels, M., Vercruysse, A. and Rogiers, V. (1998) Collagen-gel cultures of rat hepatocytes: collagen-gel sandwich and immobilization cultures. Methods Mol. Biol., 107, 303-309.
    • (1998) Methods Mol. Biol. , vol.107 , pp. 303-309
    • Beken, S.1    Vanhaecke, T.2    De Smet, K.3    Pauwels, M.4    Vercruysse, A.5    Rogiers, V.6
  • 24
    • 0028293692 scopus 로고
    • Collagen gel immobilisation provides a suitable cell matrix for long term human hepatocyte cultures in hybrid reactors
    • Koebe, H. G., Wick,M., Cramer, U., Lange, V. and Schildberg, F. W. (1994) Collagen gel immobilisation provides a suitable cell matrix for long term human hepatocyte cultures in hybrid reactors. Int. J. Artif. Organs, 17, 95-106.
    • (1994) Int. J. Artif. Organs , vol.17 , pp. 95-106
    • Koebe, H.G.1    Wick, M.2    Cramer, U.3    Lange, V.4    Schildberg, F.W.5
  • 25
    • 0043187554 scopus 로고
    • Carcinogenic Potency Project at the University of California, Berkeley, CA, USA and the Lawrence Berkeley National Laboratory and available on the site of the National Library of Medicine's (NLM®) Toxicology Data Network (TOXNET®)
    • Gold, L. S., Ames, B. N., Bernstein, L. et al. (1980) The Carcinogenic Potency Database. Carcinogenic Potency Project at the University of California, Berkeley, CA, USA and the Lawrence Berkeley National Laboratory and available on the site of the National Library of Medicine's (NLM®) Toxicology Data Network (TOXNET®).
    • (1980) The Carcinogenic Potency Database
    • Gold, L.S.1    Ames, B.N.2    Bernstein, L.3
  • 27
    • 0346243568 scopus 로고    scopus 로고
    • ArrayTrack-supporting toxicogenomic research at the U.S. Food and Drug Administration National Center for Toxicological Research
    • Tong, W., Cao, X., Harris, S. et al. (2003) ArrayTrack-supporting toxicogenomic research at the U.S. Food and Drug Administration National Center for Toxicological Research. Environ. Health Perspect., 111, 1819-1826.
    • (2003) Environ. Health Perspect. , vol.111 , pp. 1819-1826
    • Tong, W.1    Cao, X.2    Harris, S.3
  • 28
    • 11144358192 scopus 로고    scopus 로고
    • Development of public toxicogenomics software for microarray data management and analysis
    • Tong, W., Harris, S., Cao, X. et al. (2004) Development of public toxicogenomics software for microarray data management and analysis. Mutat. Res., 549, 241-253.
    • (2004) Mutat. Res. , vol.549 , pp. 241-253
    • Tong, W.1    Harris, S.2    Cao, X.3
  • 31
    • 33748491517 scopus 로고    scopus 로고
    • The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements
    • Shi, L., Reid, L. H., Jones, W. D. et al. (2006) The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements. Nat. Biotechnol., 24, 1151-1161.
    • (2006) Nat. Biotechnol. , vol.24 , pp. 1151-1161
    • Shi, L.1    Reid, L.H.2    Jones, W.D.3
  • 32
    • 0037076272 scopus 로고    scopus 로고
    • Diagnosis of multiple cancer types by shrunken centroids of gene expression
    • Tibshirani, R., Hastie, T., Narasimhan, B. and Chu, G. (2002) Diagnosis of multiple cancer types by shrunken centroids of gene expression. Proc. Natl Acad. Sci. USA, 99, 6567-6572.
    • (2002) Proc. Natl Acad. Sci. USA , vol.99 , pp. 6567-6572
    • Tibshirani, R.1    Hastie, T.2    Narasimhan, B.3    Chu, G.4
  • 33
  • 34
    • 7944234072 scopus 로고    scopus 로고
    • 2-AAF-induced tumor development in nucleotide excision repair-deficient mice is associated with a defect in global genome repair but not with transcription coupled repair
    • Hoogervorst, E. M., van Oostrom, C. T., Beems, R. B., van Benthem, J., van den Berg, J., van Kreijl, C. F., Vos, J. G., de Vries, A. and van Steeg, H. (2005) 2-AAF-induced tumor development in nucleotide excision repair-deficient mice is associated with a defect in global genome repair but not with transcription coupled repair. DNA Repair (Amst.), 4, 3-9.
    • (2005) DNA Repair (Amst.) , vol.4 , pp. 3-9
    • Hoogervorst, E.M.1    Van Oostrom, C.T.2    Beems, R.B.3    Van Benthem, J.4    Van Den Berg, J.5    Van Kreijl, C.F.6    Vos, J.G.7    De Vries, A.8    Van Steeg, H.9
  • 35
    • 0041689962 scopus 로고    scopus 로고
    • Early resistance to cell death and to onset of the mitochondrial permeability transition during hepatocarcinogenesis with 2-acetylaminofluorene
    • Klohn, P. C., Soriano, M. E., Irwin, W., Penzo, D., Scorrano, L., Bitsch, A., Neumann, H. G. and Bernardi, P. (2003) Early resistance to cell death and to onset of the mitochondrial permeability transition during hepatocarcinogenesis with 2-acetylaminofluorene. Proc. Natl Acad. Sci. USA, 100, 10014-10019.
    • (2003) Proc. Natl Acad. Sci. USA , vol.100 , pp. 10014-10019
    • Klohn, P.C.1    Soriano, M.E.2    Irwin, W.3    Penzo, D.4    Scorrano, L.5    Bitsch, A.6    Neumann, H.G.7    Bernardi, P.8
  • 36
    • 60749094708 scopus 로고    scopus 로고
    • The tumor-promoting activity of 2-acetylaminofluorene is associated with disruption of the p53 signaling pathway and the balance between apoptosis and cell proliferation
    • Pogribny, I. P., Muskhelishvili, L., Tryndyak, V. P. and Beland, F. A. (2009) The tumor-promoting activity of 2-acetylaminofluorene is associated with disruption of the p53 signaling pathway and the balance between apoptosis and cell proliferation. Toxicol. Appl. Pharmacol., 235, 305-311.
    • (2009) Toxicol. Appl. Pharmacol. , vol.235 , pp. 305-311
    • Pogribny, I.P.1    Muskhelishvili, L.2    Tryndyak, V.P.3    Beland, F.A.4
  • 40
    • 0022349206 scopus 로고
    • Formation of reactive metabolites of phenacetin in humans and rats
    • Veronese, M. E., McLean, S., D'Souza, C. A. and Davies, N. W. (1985) Formation of reactive metabolites of phenacetin in humans and rats. Xenobiotica, 15, 929-940.
    • (1985) Xenobiotica , vol.15 , pp. 929-940
    • Veronese, M.E.1    McLean, S.2    D'souza, C.A.3    Davies, N.W.4
  • 41
    • 0033230581 scopus 로고    scopus 로고
    • The cellular response to p53: The decision between life and death
    • Sionov, R. V. and Haupt, Y. (1999) The cellular response to p53: the decision between life and death. Oncogene, 18, 6145-6157.
    • (1999) Oncogene , vol.18 , pp. 6145-6157
    • Sionov, R.V.1    Haupt, Y.2
  • 42
    • 0037192320 scopus 로고    scopus 로고
    • Toxicology and genetic toxicology in the new era of " toxicogenomics": Impact of "-omics" technologies
    • Aardema, M. J. and MacGregor, J. T. (2002) Toxicology and genetic toxicology in the new era of "toxicogenomics": impact of "-omics" technologies. Mutat. Res., 499, 13-25.
    • (2002) Mutat. Res. , vol.499 , pp. 13-25
    • Aardema, M.J.1    MacGregor, J.T.2
  • 43
    • 21444432708 scopus 로고    scopus 로고
    • Gene expression profile analysis: An emerging approach to investigate mechanisms of genotoxicity
    • Aubrecht, J. and Caba, E. (2005) Gene expression profile analysis: an emerging approach to investigate mechanisms of genotoxicity. Pharmacogenomics, 6, 419-428.
    • (2005) Pharmacogenomics , vol.6 , pp. 419-428
    • Aubrecht, J.1    Caba, E.2
  • 44
    • 16244408334 scopus 로고    scopus 로고
    • Unique patterns of gene expression changes in liver after treatment of mice for 2 weeks with different known carcinogens and non-carcinogens
    • Iida, M., Anna, C. H., Holliday, W. M., Collins, J. B., Cunningham, M. L., Sills, R. C. and Devereux, T. R. (2005) Unique patterns of gene expression changes in liver after treatment of mice for 2 weeks with different known carcinogens and non-carcinogens. Carcinogenesis, 26, 689-699.
    • (2005) Carcinogenesis , vol.26 , pp. 689-699
    • Iida, M.1    Anna, C.H.2    Holliday, W.M.3    Collins, J.B.4    Cunningham, M.L.5    Sills, R.C.6    Devereux, T.R.7
  • 45
    • 33748302750 scopus 로고    scopus 로고
    • Prediction of carcinogenic potential by a toxicogenomic approach using rat hepatoma cells
    • Tsujimura, K., Asamoto, M., Suzuki, S., Hokaiwado, N., Ogawa, K. and Shirai, T. (2006) Prediction of carcinogenic potential by a toxicogenomic approach using rat hepatoma cells. Cancer Sci., 97, 1002-1010.
    • (2006) Cancer Sci. , vol.97 , pp. 1002-1010
    • Tsujimura, K.1    Asamoto, M.2    Suzuki, S.3    Hokaiwado, N.4    Ogawa, K.5    Shirai, T.6
  • 46
    • 47849128187 scopus 로고    scopus 로고
    • A toxicogenomics approach for early assessment of potential non-genotoxic hepatocarcinogenicity of chemicals in rats
    • Uehara, T., Hirode, M., Ono, A. et al. (2008) A toxicogenomics approach for early assessment of potential non-genotoxic hepatocarcinogenicity of chemicals in rats. Toxicology, 250, 15-26.
    • (2008) Toxicology , vol.250 , pp. 15-26
    • Uehara, T.1    Hirode, M.2    Ono, A.3
  • 48
    • 24744445331 scopus 로고    scopus 로고
    • Amino acid deprivation induces both apoptosis and autophagy in murine C2C12 muscle cells
    • Martinet, W., De Meyer, G. R., Herman, A. G. and Kockx, M. M. (2005) Amino acid deprivation induces both apoptosis and autophagy in murine C2C12 muscle cells. Biotechnol. Lett., 27, 1157-1163.
    • (2005) Biotechnol. Lett. , vol.27 , pp. 1157-1163
    • Martinet, W.1    De Meyer, G.R.2    Herman, A.G.3    Kockx, M.M.4
  • 49
    • 71649087231 scopus 로고    scopus 로고
    • Amino acids suppress apoptosis induced by sodium laurate, an absorption enhancer
    • Takayama, C., Mukaizawa, F., Fujita, T., Ogawara, K., Higaki, K. and Kimura, T. (2009) Amino acids suppress apoptosis induced by sodium laurate, an absorption enhancer. J. Pharm. Sci., 98, 4629-4638.
    • (2009) J. Pharm. Sci. , vol.98 , pp. 4629-4638
    • Takayama, C.1    Mukaizawa, F.2    Fujita, T.3    Ogawara, K.4    Higaki, K.5    Kimura, T.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.