-
1
-
-
33845671315
-
Characterisation of marine bacteria and the activity of their enzyme systems involved in degradation of the algal storage glucan laminarin
-
Alderkamp, A.-C., M. van Rijssel, and H. Bolhuis. 2007. Characterisation of marine bacteria and the activity of their enzyme systems involved in degradation of the algal storage glucan laminarin. FEMS Microbiol. Ecol. 59:108-1172.
-
(2007)
FEMS Microbiol. Ecol.
, vol.59
, pp. 108-1172
-
-
Alderkamp, A.-C.1
Rijssel Van, M.2
Bolhuis, H.3
-
2
-
-
0036402947
-
Optimisation of glycosidases production by Pseudoalteromonas issachenkonii KMM 3549T
-
Alexeeva, Y., E. Ivanova, I. Bakunina, T. Zvaygintseva, and V. Mikhailov. 2002. Optimisation of glycosidases production by Pseudoalteromonas issachenkonii KMM 3549T. Lett. Appl. Microbiol. 35:343-346.
-
(2002)
Lett. Appl. Microbiol
, vol.35
, pp. 343-346
-
-
Alexeeva, Y.1
Ivanova, E.2
Bakunina, I.3
Zvaygintseva, T.4
Mikhailov, V.5
-
3
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
4
-
-
3042521098
-
Improved prediction of signal peptides: Signalp 3.0
-
Bendtsen, J. D., H. Nielsen, G. von Heijne, and S. Brunak. 2004. Improved prediction of signal peptides: SignalP 3.0. J. Mol. Biol. 340:783-795.
-
(2004)
J. Mol. Biol.
, vol.340
, pp. 783-795
-
-
Bendtsen, J.D.1
Nielsen, H.2
Heijne Von, G.3
Brunak, S.4
-
5
-
-
62549106593
-
Glycosidases: A key to tailored carbohydrates
-
Bojarova, P., and V. Kren. 2009. Glycosidases: a key to tailored carbohydrates. Trends Biotechnol. 27:199-209.
-
(2009)
Trends Biotechnol
, vol.27
, pp. 199-209
-
-
Bojarova, P.1
Kren, V.2
-
6
-
-
0017811185
-
Enzymatic microdetermination of glycogen
-
Bruss, M., and A. Black. 1978. Enzymatic microdetermination of glycogen.Anal. Biochem. 163:309-312.
-
(1978)
Anal Biochem
, vol.163
, pp. 309-312
-
-
Bruss, M.1
Black, A.2
-
7
-
-
0029645404
-
Structures and mechanisms of glycosyl hydrolases
-
Davies, G., and B. Henrissat. 1995. Structures and mechanisms of glycosyl hydrolases. Structure 3:853-859.
-
(1995)
Structure
, vol.3
, pp. 853-859
-
-
Davies, G.1
Henrissat, B.2
-
8
-
-
33645798054
-
Marine enzymes
-
Debashish, G., S. Malay, S. Barindra, and M. Joydeep. 2005. Marine enzymes. Adv. Biochem. Eng. Biotechnol. 96:189-218.
-
(2005)
Adv. Biochem. Eng. Biotechnol
, vol.96
, pp. 189-218
-
-
Debashish, G.1
Malay, S.2
Barindra, S.3
Joydeep, M.4
-
9
-
-
25144462641
-
Genomic perspectives in microbial oceanography
-
De Long, E. F., and D. M. Karl. 2005. Genomic perspectives in microbial oceanography. Nature 437:336-342.
-
(2005)
Nature
, vol.437
, pp. 336-342
-
-
De Long, E.F.1
Karl, D.M.2
-
10
-
-
0033230211
-
Synergistic interactions among β-laminarinase, β-1,4-glucanase, and β-glucosidase from the hyperthermophilic archaeon Pyrococcus furiosus during hydrolysis of β-1,4-β-1,3-,and mixed-linked polysaccharides
-
Driskill, L. E., M. W. Bauer, and R. M. Kelly. 1999. Synergistic interactions among β-laminarinase, β-1,4-glucanase, and β-glucosidase from the hyperthermophilic archaeon Pyrococcus furiosus during hydrolysis of β-1,4-β-1,3-,and mixed-linked polysaccharides. Biotechnol. Bioeng. 66:51-60.
-
(1999)
Biotechnol. Bioeng
, vol.66
, pp. 51-60
-
-
Driskill, L.E.1
Bauer, M.W.2
Kelly, M.R.3
-
11
-
-
16544384962
-
Promoters from a cold-adapted bacterium: Definition of a consensus motif and molecular characterization of UP regulative elements
-
Duilio, A., S. Madonna, M. L. Tutino, M. Pirozzi, G. Sannia, and G. Marino. 2004. Promoters from a cold-adapted bacterium: definition of a consensus motif and molecular characterization of UP regulative elements. Extremophiles 8:125-132.
-
(2004)
Extremophiles
, vol.8
, pp. 125-132
-
-
Duilio, A.1
Madonna, S.2
Tutino, M.L.3
Pirozzi, M.4
Sannia, G.5
Marino, G.6
-
12
-
-
0028799334
-
Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genusAlteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and proposal of twelve new species combinations
-
Gauthier, G., M. Gauthier, and R. Christen. 1995. Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genusAlteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and proposal of twelve new species combinations. Int. J. Syst. Bacteriol. 45:755-761.
-
(1995)
Int. J. Syst. Bacteriol
, vol.45
, pp. 755-761
-
-
Gauthier, G.1
Gauthier, M.2
Christen, R.3
-
13
-
-
0034333059
-
Comparative modeling of the three-dimensional structures of family 3 glycoside hydrolases
-
Harvey, A., M. Hrmova, R. De Gori, J. Varghese, and G. Fincher. 2000. Comparative modeling of the three-dimensional structures of family 3 glycoside hydrolases. Proteins Struct. Funct. Genet. 41:257-269.
-
(2000)
Proteins Struct. Funct. Genet.
, vol.41
, pp. 257-269
-
-
Harvey, A.1
Hrmova, M.2
Gori De, R.3
Varghese, J.4
Fincher, G.5
-
14
-
-
0030733350
-
Structural and sequence-based classification of glycoside hydrolases
-
Henrissat, B., and G. Davies. 1997. Structural and sequence-based classification of glycoside hydrolases. Curr. Opin. Struct. Biol.7:637-644.
-
(1997)
Curr. Opin. Struct. Biol.
, vol.7
, pp. 637-644
-
-
Henrissat, B.1
Davies, G.2
-
15
-
-
0014943898
-
Interpretation of dependency of rate parameters on the degree of polymerization of substrate in enzyme catalysed reactions. Evaluation of subsite affinities of exo-enzyme
-
Hiromi, K. 1970. Interpretation of dependency of rate parameters on the degree of polymerization of substrate in enzyme catalysed reactions. Evaluation of subsite affinities of exo-enzyme. Biochem. Biophys. Res. Commun. 40:1-6.
-
(1970)
Biochem. Biophys. Res. Commun
, vol.40
, pp. 1-6
-
-
Hiromi, K.1
-
16
-
-
0032704521
-
Marine Pseudoalteromonas species are associated with higher organisms and produce biologically active extracellular agents
-
Holmstrom, C., and S. Kjelleberg. 1999. Marine Pseudoalteromonas species are associated with higher organisms and produce biologically active extracellular agents. FEMS Microbiol. Ecol. 30:285-293.
-
(1999)
FEMS Microbiol. Ecol.
, vol.30
, pp. 285-293
-
-
Holmstrom, C.1
Kjelleberg, S.2
-
17
-
-
0034863407
-
Structure-function relationships of β-D-glucan endo- and exohydrolases from higher plants
-
Hrmova, M., and G. B. Fincher. 2001. Structure-function relationships of β-D-glucan endo-and exohydrolases from higher plants. Plant Mol. Biol. 47:73-91.
-
(2001)
Plant Mol. Biol.
, vol.47
, pp. 73-91
-
-
Hrmova, M.1
Fincher, B.G.2
-
18
-
-
0036490066
-
Two species of culturable bacteria associated with degradation of brown algae Fucus evanescens
-
Ivanova, E. P., I. Y. Bakunina, T. Sawabe, K. Hayashi, Y. V. Alexeeva, N. V. Zhukova, D. V. Nicolau, T. N. Zvaygintseva, and V. V. Mikhailov. 2002. Two species of culturable bacteria associated with degradation of brown algae Fucus evanescens. Microb. Ecol. 43:242-249.
-
(2002)
Microb. Ecol.
, vol.43
, pp. 242-249
-
-
Ivanova, E.P.1
Bakunina, I.Y.2
Sawabe, T.3
Hayashi, K.4
Alexeeva, Y.V.5
Zhukova, N.V.6
Nicolau, D.V.7
Zvaygintseva, T.N.8
Mikhailov, V.V.9
-
19
-
-
33746351766
-
Molecular cloning of the gene encoding β-1, (3 4)-glucanase A from a marine bacterium, Pseudomonas sp. PE2, an essential enzyme for the degradation of Pythium porphyrae cell walls
-
Kitamura, E., and Y. Kamei. 2006. Molecular cloning of the gene encoding β-1,3(4)-glucanase A from a marine bacterium, Pseudomonas sp. PE2, an essential enzyme for the degradation of Pythium porphyrae cell walls. Appl. Microbiol. Biotechnol. 71:630-637.
-
(2006)
Appl. Microbiol. Biotechnol
, vol.71
, pp. 630-637
-
-
Kitamura, E.1
Kamei, Y.2
-
20
-
-
36448991500
-
Clustalw and clustalx version 2
-
Larkin, M. A., G. Blackshields, N. P. Brown, R. Chenna, P. A. McGettigan, H. McWilliam, F. Valentin, I. M. Wallace, A. Wilm, R. Lopez, J. D. Thompson, T. J. Gibson, and D. G. Higgins. 2007. ClustalW and ClustalX version 2. Bioinformatics 23:2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
21
-
-
0017128317
-
Demonstration of curdlan-type polysaccharide and some other β-1,3-glucan in microorganisms with aniline blue
-
Nakanishi, I., K. Kimura, T. Suzuki, M. Ishikawa, I. Banno, T. Sakane, and T. Harada. 1976. Demonstration of curdlan-type polysaccharide and some other β-1,3-glucan in microorganisms with aniline blue. J. Gen. Appl. Microbiol. 22:1-11.
-
(1976)
J. Gen. Appl. Microbiol
, vol.22
, pp. 1-11
-
-
Nakanishi, I.1
Kimura, K.2
Suzuki, T.3
Ishikawa, M.4
Banno, I.5
Sakane, T.6
Harada, T.7
-
22
-
-
73349138603
-
Purification and molecular characterization of exo-β-1,3-glucanases from marine yeast Williopsis saturnus WC91-2
-
Peng, Y., Z.-M. Chi, X.-H. Wang, and J. Li. 2009. Purification and molecular characterization of exo-β-1,3-glucanases from marine yeast Williopsis saturnus WC91-2. Appl. Microbiol. Biotechnol. 85:85-94.
-
(2009)
Appl. Microbiol. Biotechnol
, vol.85
, pp. 85-94
-
-
Peng, Y.1
Chi, Z.-M.2
Wang, X.-H.3
Li, J.4
-
23
-
-
0034731485
-
Bacterial 1,3-1,4-β-glucanases: Structure, function and protein engineering
-
Planas, A. 2000. Bacterial 1,3-1,4-β-glucanases: structure, function and protein engineering. Biochim. Biophys. Acta 1543:361-382.
-
(2000)
Biochim. Biophys. Acta
, vol.1543
, pp. 361-382
-
-
Planas, A.1
-
25
-
-
85001034662
-
Seaweed polysaccharides
-
Rinaudo, M. 2007. Seaweed polysaccharides. Comprehensive Glycosci. 2:691-735.
-
(2007)
Comprehensive Glycosci
, vol.2
, pp. 691-735
-
-
Rinaudo, M.1
-
26
-
-
0026694947
-
-
Rosenfeld, J., J. Capdeveille, J. Guillemot, and P. Ferrara. 1992. In-gel digestion of proteins for internal sequence analysis after one- or two-dimensional gel electrophoresis. Anal. Biochem. 203:173-179.
-
(1992)
Anal. Biochem
, vol.203
, pp. 173-179
-
-
Rosenfeld, J.1
Capdeveille, J.2
Guillemot, J.3
Ferrara, P.4
-
27
-
-
1342311388
-
Merging the potential of microbial genetics with biological and chemical diversity: An even brighter future for marine natural product drug discovery
-
Salomon, C. E., N. A. Magarvey, and D. H. Sherman. 2004. Merging the potential of microbial genetics with biological and chemical diversity: an even brighter future for marine natural product drug discovery. Nat. Prod. Rep. 21:105-121.
-
(2004)
Nat. Prod. Rep.
, vol.21
, pp. 105-121
-
-
Salomon, C.E.1
Magarvey, N.A.2
Sherman, H.D.3
-
28
-
-
0004136246
-
-
2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook, J., E. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.2
Maniatis, T.3
-
29
-
-
33750423631
-
Notes on sugar determination
-
Somogyi, M. 1952. Notes on sugar determination. J. Biol. Chem. 195:19-23.
-
(1952)
J. Biol. Chem.
, vol.195
, pp. 19-23
-
-
Somogyi, M.1
-
30
-
-
0003700069
-
-
La Trobe University Press, Melbourne, Australia
-
Stone, B. A., and A. E. Clarke. 1992. Chemistry and biology of (1,3)-β- glucans. La Trobe University Press, Melbourne, Australia.
-
(1992)
Chemistry and Biology of (1,3)-β- Glucans
-
-
Stone, B.A.1
Clarke, A.E.2
-
31
-
-
84954926918
-
Fractionation of isozymes and determination of the subsite structure of glucoamylase from Rhizopus niveus
-
Tanaka, A., Y. Fukuchi, M. Ohnishi, K. Hiromi, S. Aibara, and Y. Morita. 1983. Fractionation of isozymes and determination of the subsite structure of glucoamylase from Rhizopus niveus. Agric. Biol. Chem. 47:573-580.
-
(1983)
Agric. Biol. Chem.
, vol.47
, pp. 573-580
-
-
Tanaka, A.1
Fukuchi, Y.2
Ohnishi, M.3
Hiromi, K.4
Aibara, S.5
Morita, Y.6
-
32
-
-
33745746213
-
Glycosyl hydrolases and glycosyl transferases in the synthesis of oligosaccharides
-
Trincone, A., and A. Giordano. 2006. Glycosyl hydrolases and glycosyl transferases in the synthesis of oligosaccharides. Curr. Org. Chem. 10:1163-1193.
-
(2006)
Curr. Org. Chem.
, vol.10
, pp. 1163-1193
-
-
Trincone, A.1
Giordano, A.2
-
33
-
-
0036311047
-
Phylogenic analysis of three marine bacteria that have an ability to decompose Laminaria japonica
-
Uchida, M. 2002. Phylogenic analysis of three marine bacteria that have an ability to decompose Laminaria japonica. Fish. Sci. 68:703-705.
-
(2002)
Fish. Sci.
, vol.68
, pp. 703-705
-
-
Uchida, M.1
-
34
-
-
0004273958
-
-
Cambridge University Press, Cambridge, United Kingdom
-
Van den Hoek, C., D. G. Mann, and H. M. Jahns. 1995. Algae: an introduction to phycology. Cambridge University Press, Cambridge, United Kingdom.
-
(1995)
Algae: An Introduction to Phycology
-
-
Van Den Hoek, C.1
Mann, D.G.2
Jahns, H.M.3
-
35
-
-
0033081517
-
Three-dimensional structure of a barley β-D-glucan exohydrolase, a family 3glycosyl hydrolase
-
Varghese, J. N., M. Hrmova, and G. B. Fincher. 1999. Three-dimensional structure of a barley β-D-glucan exohydrolase, a family 3glycosyl hydrolase. Struct. Fold. Des. 7:179-190.
-
(1999)
Struct. Fold. Des.
, vol.7
, pp. 179-190
-
-
Varghese, J.N.1
Hrmova, M.2
Fincher, B.G.3
-
36
-
-
33746528745
-
Beneficial role of sulfated polysaccharides from edible seaweed Fucus vesiculosis in experimental hyperoxaluria
-
Veena, C. K., A. Josephine, S. P. Preetha, and P. Varalakshmi. 2007. Beneficial role of sulfated polysaccharides from edible seaweed Fucus vesiculosis in experimental hyperoxaluria. Food Chem. 100:1552-1559.
-
(2007)
Food Chem.
, vol.100
, pp. 1552-1559
-
-
Veena, C.K.1
Josephine, A.2
Preetha, S.P.3
Varalakshmi, P.4
-
37
-
-
0031733570
-
Identification of marine agarolytic Pseudoalteromonas isolate and characterization of its extracellular agarase
-
Vera, J., R. Alvarez, E. Murano, J. C. Slebe, and O. Leon. 1998. Identification of marine agarolytic Pseudoalteromonas isolate and characterization of its extracellular agarase. Appl. Environ. Microbiol. 64:4378-4383.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 4378-4383
-
-
Vera, J.1
Alvarez, R.2
Murano, E.3
Slebe, J.C.4
Leon, O.5
-
38
-
-
0026067797
-
16S ribosomal DNA amplification for phylogenetic study
-
Weisburg, W., S. Barns, D. Pelletier, and D. Lane. 1991. 16S ribosomal DNA amplification for phylogenetic study. J. Bacteriol. 173:697-703.
-
(1991)
J. Bacteriol
, vol.173
, pp. 697-703
-
-
Weisburg, W.1
Barns, S.2
Pelletier, D.3
Lane, D.4
-
39
-
-
20444440335
-
Exploring novel bioactive compounds from marine microbes
-
Zhang, L., R. An, J. Wang, N. Sun, S. Zhang, J. Hu, and J. Kuai. 2005. Exploring novel bioactive compounds from marine microbes. Curr. Opin. Microbiol. 8:276-281.
-
(2005)
Curr. Opin. Microbiol
, vol.8
, pp. 276-281
-
-
Zhang, L.1
An, R.2
Wang, J.3
Sun, N.4
Zhang, S.5
Hu, J.6
Kuai, J.7
|