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Volumn 8, Issue 2, 2004, Pages 125-132

Promoters from a cold-adapted bacterium: Definition of a consensus motif and molecular characterization of UP regulative elements

Author keywords

Adaptation to cold; Promoter consensus sequence; Pseudoalteromonas haloplanktis; Psychrophilic bacteria; UP regulative sequence

Indexed keywords

NEGIBACTERIA; PSEUDOALTEROMONAS; PSEUDOALTEROMONAS HALOPLANKTIS;

EID: 16544384962     PISSN: 14310651     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00792-003-0371-2     Document Type: Article
Times cited : (41)

References (25)
  • 2
    • 0008298889 scopus 로고    scopus 로고
    • Aspartate aminotransferase from the Antarctic bacterium Pseudoalteromonas haloplanktis TAC125: Cloning, expression, properties, and molecular modelling
    • Birolo L, Tutino ML, Fontanella B, Gerday C, Mainolfi K, Pascarella S, Sannia G, Vinci F, Marino G (2000) Aspartate aminotransferase from the Antarctic bacterium Pseudoalteromonas haloplanktis TAC125: cloning, expression, properties, and molecular modelling. Eur J Biochem 267:2790-2802
    • (2000) Eur J Biochem , vol.267 , pp. 2790-2802
    • Birolo, L.1    Tutino, M.L.2    Fontanella, B.3    Gerday, C.4    Mainolfi, K.5    Pascarella, S.6    Sannia, G.7    Vinci, F.8    Marino, G.9
  • 3
    • 0030942268 scopus 로고    scopus 로고
    • Construction and use of a versatile set of broad-host-range cloning and expression vectors based on the RK2 replicon
    • Blatny JM, Brautaset T, Winther-Larsen HC, Haugan K, Valla S (1997) Construction and use of a versatile set of broad-host-range cloning and expression vectors based on the RK2 replicon. Appl Environ Microbiol 63:370-379
    • (1997) Appl Environ Microbiol , vol.63 , pp. 370-379
    • Blatny, J.M.1    Brautaset, T.2    Winther-Larsen, H.C.3    Haugan, K.4    Valla, S.5
  • 4
    • 0026475908 scopus 로고
    • Identification of the gene for an Escherichia coli poly(A) polymerase
    • Cao GJ, Sarkar N (1992) Identification of the gene for an Escherichia coli poly(A) polymerase. Proc Natl Acad Sci USA 89:10380-10384
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 10380-10384
    • Cao, G.J.1    Sarkar, N.2
  • 5
    • 0035039666 scopus 로고    scopus 로고
    • Maintenance of membrane fluidity in Antarctic bacteria
    • Chattopadhyay MA, Jagannadham MV (2001) Maintenance of membrane fluidity in Antarctic bacteria. Mol Biol 24:386-388
    • (2001) Mol Biol , vol.24 , pp. 386-388
    • Chattopadhyay, M.A.1    Jagannadham, M.V.2
  • 6
    • 0024297354 scopus 로고
    • Multiple sequence alignment with hierarchical clustering
    • Corpet F (1988) Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res 16:10881-10890
    • (1988) Nucleic Acids Res , vol.16 , pp. 10881-10890
    • Corpet, F.1
  • 8
    • 0035104756 scopus 로고    scopus 로고
    • Identification of an Actinobacillus pleuropneumoniae consensus promoter structure
    • Doree SM, Mulks MH (2001) Identification of an Actinobacillus pleuropneumoniae consensus promoter structure. J Bacteriol 183:1983-1989
    • (2001) J Bacteriol , vol.183 , pp. 1983-1989
    • Doree, S.M.1    Mulks, M.H.2
  • 9
    • 0033567215 scopus 로고    scopus 로고
    • Bacterial promoter architecture: Subsite structure of UP elements and interactions with the carboxyterminal domain of the RNA polymerase alpha subunit
    • Estrem ST, Ross W, Gaal T, Chen ZW, Niu W, Ebright RH, Gourse RL (1999) Bacterial promoter architecture: subsite structure of UP elements and interactions with the carboxyterminal domain of the RNA polymerase alpha subunit. Genes Dev 13:2134-2147
    • (1999) Genes Dev , vol.13 , pp. 2134-2147
    • Estrem, S.T.1    Ross, W.2    Gaal, T.3    Chen, Z.W.4    Niu, W.5    Ebright, R.H.6    Gourse, R.L.7
  • 10
    • 0033852409 scopus 로고    scopus 로고
    • UPs and downs in bacterial transcription initiation: The role of the alpha subunit of RNA polymerase in promoter recognition
    • Gourse RL, Ross W, Gaal T (2000) UPs and downs in bacterial transcription initiation: the role of the alpha subunit of RNA polymerase in promoter recognition. Mol Microbiol 37:687-695
    • (2000) Mol Microbiol , vol.37 , pp. 687-695
    • Gourse, R.L.1    Ross, W.2    Gaal, T.3
  • 11
    • 0020959710 scopus 로고
    • Studies on transformation of Escherichia coli with plasmids
    • Hanahan D (1983) Studies on transformation of Escherichia coli with plasmids. J Mol Biol 166:557-580
    • (1983) J Mol Biol , vol.166 , pp. 557-580
    • Hanahan, D.1
  • 12
    • 0035688744 scopus 로고    scopus 로고
    • Contributions of UP elements and the transcription factor FIS to expression from the seven rrn P1 promoters in Escherichia coli
    • Hirvonen CA, Ross W, Wozniak CE, Marasco E, Anthony JR, Aiyar SE, Newburn VH, Gourse RL (2001) Contributions of UP elements and the transcription factor FIS to expression from the seven rrn P1 promoters in Escherichia coli. J Bacteriol 183:6305-6314
    • (2001) J Bacteriol , vol.183 , pp. 6305-6314
    • Hirvonen, C.A.1    Ross, W.2    Wozniak, C.E.3    Marasco, E.4    Anthony, J.R.5    Aiyar, S.E.6    Newburn, V.H.7    Gourse, R.L.8
  • 14
    • 0027230594 scopus 로고
    • Compilation of E. coli mRNA promoter sequences
    • Lisser S, Margalit H (1993) Compilation of E. coli mRNA promoter sequences. Nucleic Acids Res 21:1507-1516
    • (1993) Nucleic Acids Res , vol.21 , pp. 1507-1516
    • Lisser, S.1    Margalit, H.2
  • 15
    • 0030272028 scopus 로고    scopus 로고
    • Characterization and sequence of the Escherichia coli panBCD gene cluster
    • Merkel WK, Nichols BP (1996) Characterization and sequence of the Escherichia coli panBCD gene cluster. FEMS Microbiol Lett 143:247-252
    • (1996) FEMS Microbiol Lett , vol.143 , pp. 247-252
    • Merkel, W.K.1    Nichols, B.P.2
  • 16
    • 0028230951 scopus 로고
    • Factor independent activation of rrnB P1: An "extended" promoter with an upstream element that dramatically increases promoter strength
    • Rao L, Ross W, Appleman JA, Gaal T, Leirmo S, Schlax PJ, Record MT Jr, Gourse RL (1994) Factor independent activation of rrnB P1: an "extended" promoter with an upstream element that dramatically increases promoter strength. J Mol Biol 235:1421-1435
    • (1994) J Mol Biol , vol.235 , pp. 1421-1435
    • Rao, L.1    Ross, W.2    Appleman, J.A.3    Gaal, T.4    Leirmo, S.5    Schlax, P.J.6    Record Jr., M.T.7    Gourse, R.L.8
  • 20
    • 0035108129 scopus 로고    scopus 로고
    • Effects of ribosomes and intracellular solutes on activities and stabilities of elongation factor 2 proteins from psychrotolerant and thermophilic methanogens
    • Thomas T, Kumar N, Cavicchioli R (2001) Effects of ribosomes and intracellular solutes on activities and stabilities of elongation factor 2 proteins from psychrotolerant and thermophilic methanogens. J Bacteriol 183:1974-1982
    • (2001) J Bacteriol , vol.183 , pp. 1974-1982
    • Thomas, T.1    Kumar, N.2    Cavicchioli, R.3
  • 21
    • 0037711318 scopus 로고    scopus 로고
    • GroEL from the psychrophilic bacterium Pseudoalteromonas haloplanktis TAC 125: Molecular characterization and gene cloning
    • Tosco A, Birolo L, Madonna S, Lolli G, Sannia G, Marino G (2003) GroEL from the psychrophilic bacterium Pseudoalteromonas haloplanktis TAC 125: molecular characterization and gene cloning. Extremophiles 7:17-28
    • (2003) Extremophiles , vol.7 , pp. 17-28
    • Tosco, A.1    Birolo, L.2    Madonna, S.3    Lolli, G.4    Sannia, G.5    Marino, G.6
  • 22
    • 0035430835 scopus 로고    scopus 로고
    • A novel replication element from an Antarctic plasmid as a tool for the expression of proteins at temperature
    • Tutino ML, Duilio A, Parrilli R, Remaut E, Sannia G, Marino G (2001) A novel replication element from an Antarctic plasmid as a tool for the expression of proteins at temperature. Extremophiles 5:257-264
    • (2001) Extremophiles , vol.5 , pp. 257-264
    • Tutino, M.L.1    Duilio, A.2    Parrilli, R.3    Remaut, E.4    Sannia, G.5    Marino, G.6
  • 23
    • 0031014035 scopus 로고    scopus 로고
    • Function of the C-terminal domain of the alpha subunit of Escherichia coli RNA polymerase in basal expression and integration host factor-mediated activation of the early promoter of bacteriophage Mu
    • Ulsen P van, Hillebrand M, Kainz M, Collard R, Zulianello L,Putte P van de, Gourse RL, Goosen N (1997) Function of the C-terminal domain of the alpha subunit of Escherichia coli RNA polymerase in basal expression and integration host factor-mediated activation of the early promoter of bacteriophage Mu. J Bacteriol 179:530-537
    • (1997) J Bacteriol , vol.179 , pp. 530-537
    • Van Ulsen, P.1    Hillebrand, M.2    Kainz, M.3    Collard, R.4    Zulianello, L.5    Van De Putte, P.6    Gourse, R.L.7    Goosen, N.8
  • 24
    • 0032812570 scopus 로고    scopus 로고
    • A RNA polymerase with transcriptional activity at 0 degrees C from the Antarctic bacterium Pseudomonas syringae
    • Uma S, Jadhav RS, Kumar GS, Shivaji S, Ray MK (1999) A RNA polymerase with transcriptional activity at 0 degrees C from the Antarctic bacterium Pseudomonas syringae. FEBS Lett 453:313-317
    • (1999) FEBS Lett , vol.453 , pp. 313-317
    • Uma, S.1    Jadhav, R.S.2    Kumar, G.S.3    Shivaji, S.4    Ray, M.K.5
  • 25
    • 0023429232 scopus 로고
    • Isolation and characterization of Streptococcus cremoris Wg2-specific promoters
    • Vossen JM van der, Lelie D van der,Venema (1987) Isolation and characterization of Streptococcus cremoris Wg2-specific promoters. Appl Environ Microbiol 53:2452-2357
    • (1987) Appl Environ Microbiol , vol.53 , pp. 2452-12357
    • Van Der Vossen, J.M.1    Van Der Lelie, D.2    Venema3


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