Crystallization of small proteins assisted by green fluorescent protein

Acta Crystallographica Section D: Biological Crystallography

Volumn 66, Issue 10, 2010, Pages 1059-1066

  Suzuki, Nobuhiro ^a,d   Hiraki, Masahiko ^a   Yamada, Yusuke ^a   Matsugaki, Naohiro ^a   Igarashi, Noriyuki ^a   Kato, Ryuichi ^a   Dikic, Ivan ^b   Drew, David ^c   Iwata, So ^c   Wakatsuki, Soichi ^a   Kawasaki, Masato ^a  

^a INSTITUTE OF MATERIALS STRUCTURE SCIENCE   (Japan)

^b GOETHE UNIVERSITY MEDICAL SCHOOL   (Germany)

^c IMPERIAL COLLEGE LONDON   (United Kingdom)

^d NATIONAL INSTITUTE OF AGROBIOLOGICAL SCIENCES   (Japan)

Author keywords

crystallization; fusion proteins; green fluorescent protein

Indexed keywords

DNA DIRECTED DNA POLYMERASE; DNA POLYMERASE THETA; GREEN FLUORESCENT PROTEIN; HYBRID PROTEIN; TYROSINE; UBIQUITIN;

ANIMAL; ARTICLE; CHEMISTRY; CRYSTALLIZATION; GENETICS; METABOLISM; METHODOLOGY; MOUSE; PROTEIN BINDING; PROTEIN ENGINEERING; PROTEIN TERTIARY STRUCTURE; X RAY CRYSTALLOGRAPHY;

ANIMALS; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; DNA-DIRECTED DNA POLYMERASE; GREEN FLUORESCENT PROTEINS; MICE; PROTEIN BINDING; PROTEIN ENGINEERING; PROTEIN STRUCTURE, TERTIARY; RECOMBINANT FUSION PROTEINS; TYROSINE; UBIQUITIN;

EID: 77958166069     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S0907444910032944     Document Type: Article

References (34)

1. Akerboom, J., Rivera, J. D., Guilbe, M. M., Malavé, E. C., Hernandez, H. H., Tian, L., Hires, S. A., Marvin, J. S., Looger, L. L. & Schreiter, E. R. (2009). J. Biol. Chem. 284, 6455-6464.
2. Bienko, M., Green, C. M., Crosetto, N., Rudolf, F., Zapart, G., Coull, B., Kannouche, P.,Wider, G., Peter, M., Lehmann, A. R., Hofmann, K. & Dikic, I. (2005). Science, 310, 1821-1824.
3. Bomar, M. G., D'Souza, S., Bienko, M., Dikic, I., Walker, G. C. & Zhou, P. (2010). Mol. Cell, 37, 408-417.
4. Cherezov, V., Rosenbaum, D. M., Hanson, M. A., Rasmussen, S. G., Thian, F. S., Kobilka, T. S., Choi, H.-J., Kuhn, P., Weis, W. I., Kobilka, B. K. & Stevens, R. C. (2007). Science, 318, 1258-1265.
5. Cormack, B. P., Bertram, G., Egerton, M., Gow, N. A., Falkow, S. & Brown, A. J. (1997). Microbiology, 143, 303-311.
6. Derewenda, Z. S. (2010). Acta Cryst. D66, 604-615.
7. Donahue, J. P., Patel, H., Anderson, W. F. & Hawiger, J. (1994). Proc. Natl Acad. Sci. USA, 91, 12178-12182.
8. Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. (2010). Acta Cryst. D66, 486-501.
9. Falini, G., Fermani, S., Tosi, G., Arnesano, F. & Natile, G. (2008). Chem. Commun., pp. 5960-5962.
10. Fellouse, F. A., Li, B., Compaan, D. M., Peden, A. A., Hymowitz, S. G.& Sidhu, S. S. (2005). J. Mol. Biol. 348, 1153-1162.
11. Ha°kansson, K. O., Østergaard, H. & Winther, J. R. (2006). Acta Cryst. F62, 920-922.
12. Ha°kansson, K. O. & Winther, J. R. (2007). Acta Cryst. D63, 288-294.
13. Hiraki, M. et al. (2006). Acta Cryst. D62, 1058-1065.
14. Holm, L., Kää riä inen, S., Rosenström, P. & Schenkel, A. (2008). Bioinformatics, 24, 2780-2781.
15. Hurley, J. H., Lee, S. & Prag, G. (2006). Biochem. J. 399, 361-372.
16. Jaakola, V. P., Griffith, M. T., Hanson, M. A., Cherezov, V., Chien, E. Y., Lane, J. R., Ijzerman, A. P. & Stevens, R. C. (2008). Science, 322, 1211-1217.
17. Kawate, T. & Gouaux, E. (2006). Structure, 14, 673-681.
18. Kirchhofer, A., Helma, J., Schmidthals, K., Frauer, C., Cui, S., Karcher, A., Pellis, M., Muyldermans, S., Casas-Delucchi, C. S., Cardoso, M. C., Leonhardt, H., Hopfner, K. P. & Rothbauer, U. (2010). Nature Struct. Mol. Biol. 17, 133-138.
19. Koide, A., Gilbreth, R. N., Esaki, K., Tereshko, V. & Koide, S. (2007). Proc. Natl Acad. Sci. USA, 104, 6632-6637.
20. Koide, S. (2009). Curr. Opin. Struct. Biol. 19, 449-457.
21. Krissinel, E. & Henrick, K. (2007). J. Mol. Biol. 372, 774-797.
22. Moon, A. F., Mueller, G. A., Zhong, X. & Pedersen, L. C. (2010). Protein Sci. 19, 901-913.
23. Murshudov, G. N., Vagin, A. A. & Dodson, E. J. (1997). Acta Cryst. D53, 240-255.
24. Newstead, S., Kim, H., von Heijne, G., Iwata, S. & Drew, D. (2007). Proc. Natl Acad. Sci. USA, 104, 13936-13941.
25. Perrakis, A., Morris, R. & Lamzin, V. S. (1999). Nature Struct. Biol. 6, 458-463.
26. Rosenbaum, D. M., Cherezov, V., Hanson, M. A., Rasmussen, S. G., Thian, F. S., Kobilka, T. S., Choi, H.-J., Yao, X.-J., Weis, W. I., Stevens, R. C. & Kobilka, B. K. (2007). Science, 318, 1266-1273.
27. Sennhauser, G. & Grütter, M. G. (2008). Structure, 16, 1443-1453.
28. Smyth, D. R., Mrozkiewicz, M. K., McGrath, W. J., Listwan, P. & Kobe, B. (2003). Protein Sci. 12, 1313-1322.
29. Vagin, A. & Teplyakov, A. (1997). J. Appl. Cryst. 30, 1022-1025.
30. Vermeulen, W., Vanhaesebrouck, P., Van Troys, M., Verschueren, M., Fant, F., Goethals, M., Ampe, C., Martins, J. C. & Borremans, F. A. (2004). Protein Sci. 13, 1276-1287.
31. Vijay-Kumar, S., Bugg, C. E. & Cook, W. J. (1987). J. Mol. Biol. 194, 531-544.
32. Waldo, G. S., Standish, B. M., Berendzen, J. & Terwilliger, T. C. (1999). Nature Biotechnol. 17, 691-695.
33. Wang, Q., Shui, B., Kotlikoff, M. I. & Sondermann, H. (2008). Structure, 16, 1817-1827.
34. Yang, F.,Moss, L. G. & Phillips, G. N. Jr (1996). Nature Biotechnol. 14, 1246-1251.