-
1
-
-
0014690545
-
Studies on the synthesis and degradation of proteins of the endoplasmic reticulum of rat liver
-
Arias IM, Doyle D, Schimke RT. 1969. Studies on the synthesis and degradation of proteins of the endoplasmic reticulum of rat liver. J Biol Chem 244:3303-3315.
-
(1969)
J Biol Chem
, vol.244
, pp. 3303-3315
-
-
Arias, I.M.1
Doyle, D.2
Schimke, R.T.3
-
2
-
-
44249091879
-
Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics
-
Baerenfaller K, Grossmann J, Grobei MA, Hull R, Hirsch-Hoffmann M, Yalovsky S, Zimmermann P, Grossniklaus U, GruissemW, Baginsky S. 2008. Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics. Science 320:938-941.
-
(2008)
Science
, vol.320
, pp. 938-941
-
-
Baerenfaller, K.1
Grossmann, J.2
Grobei, M.A.3
Hull, R.4
Hirsch-Hoffmann, M.5
Yalovsky, S.6
Zimmermann, P.7
Grossniklaus, U.8
Gruissem, W.9
Baginsky, S.10
-
3
-
-
34248595908
-
Stable isotope labeling tandem mass spectrometry (SILT) to quantify protein production and clearance rates
-
Bateman RJ, Munsell LY, Chen X, Holtzman DM, Yarasheski KE. 2007. Stable isotope labeling tandem mass spectrometry (SILT) to quantify protein production and clearance rates. J Am Soc Mass Spectrom 18:997-1006.
-
(2007)
J Am Soc Mass Spectrom
, vol.18
, pp. 997-1006
-
-
Bateman, R.J.1
Munsell, L.Y.2
Chen, X.3
Holtzman, D.M.4
Yarasheski, K.E.5
-
4
-
-
33748377124
-
Quantification of protein half-lives in the budding yeast proteome
-
Belle A, Tanay A, Bitincka L, Shamir R, O'Shea EK. 2006. Quantification of protein half-lives in the budding yeast proteome. Proc Natl Acad Sci USA 103:13004-13009.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 13004-13009
-
-
Belle, A.1
Tanay, A.2
Bitincka, L.3
Shamir, R.4
O'Shea, E.K.5
-
5
-
-
0014060145
-
Changes in amino acid permeation during sporulation
-
Bernlohr RW. 1967. Changes in amino acid permeation during sporulation. J Bacteriol 93:1031-1044.
-
(1967)
J Bacteriol
, vol.93
, pp. 1031-1044
-
-
Bernlohr, R.W.1
-
6
-
-
0015501515
-
18Oxygen probes of protein turnover, amino acid transport, and protein synthesis in Bacillus licheniformis
-
Bernlohr RW. 1972. 18Oxygen probes of protein turnover, amino acid transport, and protein synthesis in Bacillus licheniformis. J Biol Chem 247:4893-4899.
-
(1972)
J Biol Chem
, vol.247
, pp. 4893-4899
-
-
Bernlohr, R.W.1
-
7
-
-
0014983791
-
Characterization and regulation of protease synthesis and activity in Bacillus licheniformis
-
Bernlohr RW, Clark V. 1971. Characterization and regulation of protease synthesis and activity in Bacillus licheniformis. J Bacteriol 105:276-283.
-
(1971)
J Bacteriol
, vol.105
, pp. 276-283
-
-
Bernlohr, R.W.1
Clark, V.2
-
8
-
-
0036270739
-
Evaluation of a nutrient starvation model of Mycobacterium tuberculosis persistence by gene and protein expression profiling
-
Betts JC, Lukey PT, Robb LC,McAdamRA, Duncan K. 2002. Evaluation of a nutrient starvation model of Mycobacterium tuberculosis persistence by gene and protein expression profiling. Mol Microbiol 43:717-731.
-
(2002)
Mol Microbiol
, vol.43
, pp. 717-731
-
-
Betts, J.C.1
Lukey, P.T.2
Lcmcadamra, R.3
Duncan, K.4
-
9
-
-
16344389629
-
Metabolic labeling of proteins for proteomics
-
Beynon RJ, Pratt JM. 2005. Metabolic labeling of proteins for proteomics. Mol Cell Proteomics 4:857-872.
-
(2005)
Mol Cell Proteomics
, vol.4
, pp. 857-872
-
-
Beynon, R.J.1
Pratt, J.M.2
-
10
-
-
0030138875
-
The origins of intermediary metabolism at Columbia College of Physicians and Surgeons (P&S)
-
Bloch K. 1996. The origins of intermediary metabolism at Columbia College of Physicians and Surgeons (P&S). FASEB J 10:802-805.
-
(1996)
FASEB J
, vol.10
, pp. 802-805
-
-
Bloch, K.1
-
11
-
-
0000137460
-
The biological precursors of creatine
-
Bloch K, Schoenheimer R. 1941. The biological precursors of creatine. J Biol Chem 138:167-194.
-
(1941)
J Biol Chem
, vol.138
, pp. 167-194
-
-
Bloch, K.1
Schoenheimer, R.2
-
13
-
-
25844493684
-
The "continuing" metabolismof nitrogen in animals
-
Borsook H, Keighley GL. 1935. The "continuing" metabolismof nitrogen in animals. Proc R Soc Lond B Biol Sci 118:488-521.
-
(1935)
Proc R Soc Lond B Biol Sci
, vol.118
, pp. 488-521
-
-
Borsook, H.1
Keighley, G.L.2
-
14
-
-
0347361590
-
Synthesis/ degradation ratio mass spectrometry for measuring relative dynamic protein turnover
-
Cargile BJ, Bundy JL, Grunden AM, Stephenson JL, Jr. 2004. Synthesis/ degradation ratio mass spectrometry for measuring relative dynamic protein turnover. Anal Chem 76:86-97.
-
(2004)
Anal Chem
, vol.76
, pp. 86-97
-
-
Cargile, B.J.1
Bundy, J.L.2
Grunden, A.M.3
Stephenson Jr., J.L.4
-
16
-
-
33750080170
-
ICAT-based comparative proteomic analysis of non-replicating persistent Mycobacterium tuberculosis
-
Cho SH, Goodlett D, Franzblau S. 2006. ICAT-based comparative proteomic analysis of non-replicating persistent Mycobacterium tuberculosis. Tuberculosis (Edinb) 86:445-460.
-
(2006)
Tuberculosis (Edinb)
, vol.86
, pp. 445-460
-
-
Cho, S.H.1
Goodlett, D.2
Franzblau, S.3
-
17
-
-
57349097152
-
Dynamic proteomics of individual cancer cells in response to a drug
-
Cohen AA, Geva-Zatorsky N, Eden E, Frenkel-Morgenstern M, Issaeva I, Sigal A, Milo R, Cohen-Saidon C, Liron Y, Kam Z, Cohen L, Danon T, Perzov N, Alon . 2008. Dynamic proteomics of individual cancer cells in response to a drug. Science 322:1511-1516.
-
(2008)
Science
, vol.322
, pp. 1511-1516
-
-
Cohen, A.A.1
Geva-Zatorsky, N.2
Eden, E.3
Frenkel-Morgenstern, M.4
Issaeva, I.5
Sigal, A.6
Milo, R.7
Cohen-Saidon, C.8
Liron, Y.9
Kam, Z.10
Cohen, L.11
Danon, T.12
Perzov, N.13
Alon14
-
18
-
-
0015499901
-
Turnover and exchange of ribosomal proteins from rat liver
-
Dice JF, Schimke RT. 1972. Turnover and exchange of ribosomal proteins from rat liver. J Biol Chem 247:98-111.
-
(1972)
J Biol Chem
, vol.247
, pp. 98-111
-
-
Dice, J.F.1
Schimke, R.T.2
-
19
-
-
33745539414
-
Protein turnover on the scale of the proteome
-
Doherty MK, Beynon RJ. 2006. Protein turnover on the scale of the proteome. Expert Rev Proteomics 3:97-110.
-
(2006)
Expert Rev Proteomics
, vol.3
, pp. 97-110
-
-
Doherty, M.K.1
Beynon, R.J.2
-
20
-
-
13844317869
-
Proteome dynamics in complex organisms: Using stable isotopes to monitor individual protein turnover rates
-
Doherty MK, Whitehead C, McCormack H, Gaskell SJ, Beynon RJ. 2005. Proteome dynamics in complex organisms: Using stable isotopes to monitor individual protein turnover rates. Proteomics 5:522-533.
-
(2005)
Proteomics
, vol.5
, pp. 522-533
-
-
Doherty, M.K.1
Whitehead, C.2
McCormack, H.3
Gaskell, S.J.4
Beynon, R.J.5
-
21
-
-
60849097304
-
Turnover of the human proteome: Determination of protein intracellular stability by dynamic SILAC
-
Doherty MK, Hammond DE, Clague MJ, Gaskell SJ, Beynon RJ. 2009. Turnover of the human proteome: Determination of protein intracellular stability by dynamic SILAC. J Proteome Res 8:104-112.
-
(2009)
J Proteome Res
, vol.8
, pp. 104-112
-
-
Doherty, M.K.1
Hammond, D.E.2
Clague, M.J.3
Gaskell, S.J.4
Beynon, R.J.5
-
22
-
-
70449199499
-
The utilization of phenylalanine and tyrosine for protein synthesis by human cells in tissue culture
-
Eagle H, Piez KA, Fleischman R. 1957. The utilization of phenylalanine and tyrosine for protein synthesis by human cells in tissue culture. J Biol Chem 228:847-861.
-
(1957)
J Biol Chem
, vol.228
, pp. 847-861
-
-
Eagle, H.1
Piez, K.A.2
Fleischman, R.3
-
24
-
-
55949099548
-
Stable isotope labeling tandem mass spectrometry (SILT): Integration with peptide identification and extension to data-dependent scans
-
Elbert DL, Mawuenyega KG, Scott EA, Wildsmith KR, Bateman RJ. 2008. Stable isotope labeling tandem mass spectrometry (SILT): Integration with peptide identification and extension to data-dependent scans. J Proteome Res 7:4546-4556.
-
(2008)
J Proteome Res
, vol.7
, pp. 4546-4556
-
-
Elbert, D.L.1
Mawuenyega, K.G.2
Scott, E.A.3
Wildsmith, K.R.4
Bateman, R.J.5
-
25
-
-
0032489434
-
Altered turnover of calcium regulatory proteins of the sarcoplasmic reticulum in aged skeletal muscle
-
Ferrington DA, Krainev AG, Bigelow DJ. 1998. Altered turnover of calcium regulatory proteins of the sarcoplasmic reticulum in aged skeletal muscle. J Biol Chem 273:5885-5891.
-
(1998)
J Biol Chem
, vol.273
, pp. 5885-5891
-
-
Ferrington, D.A.1
Krainev, A.G.2
Bigelow, D.J.3
-
26
-
-
0029790056
-
Regulation of SOS mutagenesis by proteolysis
-
Frank EG, Ennis DG, Gonzalez M, Levine AS,Woodgate R. 1996. Regulation of SOS mutagenesis by proteolysis. Proc Natl Acad Sci USA 93:10291-10296.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 10291-10296
-
-
Frank, E.G.1
Ennis, D.G.2
Gonzalez, M.3
Levine Aswoodgate, R.4
-
27
-
-
0032694167
-
A sampling of the yeast proteome
-
Futcher B, Latter GI, Monardo P, McLaughlin CS, Garrels JI. 1999. A sampling of the yeast proteome. Mol Cell Biol 19:7357-7368.
-
(1999)
Mol Cell Biol
, vol.19
, pp. 7357-7368
-
-
Futcher, B.1
Latter, G.I.2
Monardo, P.3
McLaughlin, C.S.4
Garrels, J.I.5
-
28
-
-
0036653675
-
Concomitant determination of absolute values of cellular protein amounts, synthesis rates, and turnover rates by quantitative proteome profiling
-
Gerner C, Vejda S, Gelbmann D, Bayer E, Gotzmann J, Schulte-Hermann R, Mikulits W. 2002. Concomitant determination of absolute values of cellular protein amounts, synthesis rates, and turnover rates by quantitative proteome profiling. Mol Cell Proteomics 1:528-537.
-
(2002)
Mol Cell Proteomics
, vol.1
, pp. 528-537
-
-
Gerner, C.1
Vejda, S.2
Gelbmann, D.3
Bayer, E.4
Gotzmann, J.5
Schulte-Hermann, R.6
Mikulits, W.7
-
29
-
-
0015292247
-
Degradation of abnormal proteins in Escherichia coli (protein breakdown-protein structure-mistranslation-amino acid analogs- puromycin)
-
Goldberg AL. 1972. Degradation of abnormal proteins in Escherichia coli (protein breakdown-protein structure-mistranslation-amino acid analogs- puromycin). Proc Natl Acad Sci USA 69:422-426.
-
(1972)
Proc Natl Acad Sci USA
, vol.69
, pp. 422-426
-
-
Goldberg, A.L.1
-
30
-
-
0032535038
-
Lon-mediated proteolysis of the Escherichia coli UmuD mutagenesis protein: In vitro degradation and identification of residues required for proteolysis
-
Gonzalez M, Frank EG, Levine AS, Woodgate R. 1998. Lon-mediated proteolysis of the Escherichia coli UmuD mutagenesis protein: In vitro degradation and identification of residues required for proteolysis. Genes Dev 12:3889-3899.
-
(1998)
Genes Dev
, vol.12
, pp. 3889-3899
-
-
Gonzalez, M.1
Frank, E.G.2
Levine, A.S.3
Woodgate, R.4
-
31
-
-
0034596991
-
Subunit-specific degradation of the UmuD/D' heterodimer by the ClpXP protease: The role of trans recognition in UmuD0 stability
-
Gonzalez M, Rasulova F, Maurizi MR, Woodgate R. 2000. Subunit-specific degradation of the UmuD/D' heterodimer by the ClpXP protease: The role of trans recognition in UmuD0 stability. EMBO J 19:5251-5258.
-
(2000)
EMBO J
, vol.19
, pp. 5251-5258
-
-
Gonzalez, M.1
Rasulova, F.2
Maurizi, M.R.3
Woodgate, R.4
-
32
-
-
0035836761
-
Proteomic analysis of the bacterial cell cycle
-
Grunenfelder B, Rummel G,Vohradsky J, Roder D, Langen H, Jenal U. 2001. Proteomic analysis of the bacterial cell cycle. Proc Natl Acad Sci USA 98:4681-4686.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 4681-4686
-
-
Grunenfelder, B.1
Rummel Gvohradsky, J.2
Roder, D.3
Langen, H.4
Jenal, U.5
-
33
-
-
0026328187
-
Rudolf Schoenheimer and the concept of the dynamic state of body constituents
-
GuggenheimKY. 1991. Rudolf Schoenheimer and the concept of the dynamic state of body constituents. J Nutr 121:1701-1704.
-
(1991)
J Nutr
, vol.121
, pp. 1701-1704
-
-
Guggenheim, K.Y.1
-
34
-
-
0026425183
-
Relationship between precursor enrichment and ratio of excess M2/excess M1 isotopomer frequencies in a secreted polymer
-
Hellerstein MK. 1991. Relationship between precursor enrichment and ratio of excess M2/excess M1 isotopomer frequencies in a secreted polymer. J Biol Chem 266:10920-10924.
-
(1991)
J Biol Chem
, vol.266
, pp. 10920-10924
-
-
Hellerstein, M.K.1
-
35
-
-
0026448766
-
Mass isotopomer distribution analysis: A technique for measuring biosynthesis and turnover of polymers
-
Hellerstein MK, Neese RA. 1992. Mass isotopomer distribution analysis: A technique for measuring biosynthesis and turnover of polymers. Am J Physiol 263:E988-E1001.
-
(1992)
Am J Physiol
, vol.263
-
-
Hellerstein, M.K.1
Neese, R.A.2
-
36
-
-
0033038503
-
Mass isotopomer distribution analysis at eight years: Theoretical, analytic, and experimental considerations
-
Hellerstein MK, Neese RA. 1999. Mass isotopomer distribution analysis at eight years: Theoretical, analytic, and experimental considerations.Am J Physiol 276:E1146-E1170.
-
(1999)
Am J Physiol
, vol.276
-
-
Hellerstein, M.K.1
Neese, R.A.2
-
37
-
-
0000291637
-
The general stress response in Eschericha coli
-
Storz G, Hengge-Aronis R, editors, Washington, DC: ASM Press
-
Hengge-Aronis R. 2000. The general stress response in Eschericha coli. In: Storz G, Hengge-Aronis R, editors. Bacterial stress responses. Washington, DC: ASM Press. pp. 161-178.
-
(2000)
Bacterial Stress Responses
, pp. 161-178
-
-
Hengge-Aronis, R.1
-
38
-
-
40849118255
-
Bacterial growth and cell division:Amycobacterial perspective
-
table of contents
-
Hett EC, Rubin EJ. 2008. Bacterial growth and cell division: Amycobacterial perspective. Microbiol Mol Biol Rev 72:126-156, table of contents.
-
(2008)
Microbiol Mol Biol Rev
, vol.72
, pp. 126-156
-
-
Hett, E.C.1
Rubin, E.J.2
-
39
-
-
0002865516
-
Studies on the induced synthesis of beta-galactosidase in Escherichia coli: The kinetics and mechanism of sulfur incorporation
-
Hogness DS, Cohn M, Monod J. 1955. Studies on the induced synthesis of beta-galactosidase in Escherichia coli: The kinetics and mechanism of sulfur incorporation. Biochim Biophys Acta 16:99-116.
-
(1955)
Biochim Biophys Acta
, vol.16
, pp. 99-116
-
-
Hogness, D.S.1
Cohn, M.2
Monod, J.3
-
40
-
-
0000506727
-
Protein turnover in plants and possible means of its regulation
-
Huffaker RC, Peterson LW. 1974. Protein turnover in plants and possible means of its regulation. Annu Rev Plant Physiol 25:363-392.
-
(1974)
Annu Rev Plant Physiol
, vol.25
, pp. 363-392
-
-
Huffaker, R.C.1
Peterson, L.W.2
-
41
-
-
0035900693
-
Hitler's gift and the era of biosynthesis
-
Kennedy EP. 2001. Hitler's gift and the era of biosynthesis. J Biol Chem 276: 42619-42631.
-
(2001)
J Biol Chem
, vol.276
, pp. 42619-42631
-
-
Kennedy, E.P.1
-
42
-
-
0345657890
-
Protein turnover in growing cultures of Escherichia coli
-
Koch AL, Levy HR. 1955. Protein turnover in growing cultures of Escherichia coli. J Biol Chem 217:947-958.
-
(1955)
J Biol Chem
, vol.217
, pp. 947-958
-
-
Koch, A.L.1
Levy, H.R.2
-
43
-
-
0018856008
-
The relative rates of protein synthesis and degradation in a growing culture of Escherichia coli
-
Larrabee KL, Phillips JO,Williams GJ, Larrabee AR. 1980. The relative rates of protein synthesis and degradation in a growing culture of Escherichia coli. J Biol Chem 255:4125-4130.
-
(1980)
J Biol Chem
, vol.255
, pp. 4125-4130
-
-
Larrabee, K.L.1
Phillips, J.O.2
Williams, G.J.3
Larrabee, A.R.4
-
44
-
-
0034730496
-
A specificity-enhancing factor for the ClpXP degradation machine
-
Levchenko I, Seidel M, Sauer RT, Baker TA. 2000. A specificity-enhancing factor for the ClpXP degradation machine. Science 289:2354-2356.
-
(2000)
Science
, vol.289
, pp. 2354-2356
-
-
Levchenko, I.1
Seidel, M.2
Sauer, R.T.3
Baker, T.A.4
-
45
-
-
0028019587
-
The role of the sigma factor sigma S (KatF) in bacterial global regulation
-
Loewen PC, Hengge-Aronis R. 1994. The role of the sigma factor sigma S (KatF) in bacterial global regulation. Annu Rev Microbiol 48:53-80.
-
(1994)
Annu Rev Microbiol
, vol.48
, pp. 53-80
-
-
Loewen, P.C.1
Hengge-Aronis, R.2
-
46
-
-
28544433959
-
Measurement of the isotope enrichment of stable isotope-labeled proteins using highresolution mass spectra of peptides
-
MacCoss MJ,Wu CC, Matthews DE,Yates JR, III. 2005. Measurement of the isotope enrichment of stable isotope-labeled proteins using highresolution mass spectra of peptides. Anal Chem 77:7646-7653.
-
(2005)
Anal Chem
, vol.77
, pp. 7646-7653
-
-
MacCoss, M.J.1
Wu, C.C.2
Matthews, D.E.3
Yates III, J.R.4
-
47
-
-
0037936961
-
Turnover of protein in starved bacteria and its relationship to the induced synthesis of enzyme
-
Mandelstam J. 1957. Turnover of protein in starved bacteria and its relationship to the induced synthesis of enzyme. Nature 179:1179-1181.
-
(1957)
Nature
, vol.179
, pp. 1179-1181
-
-
Mandelstam, J.1
-
48
-
-
0000478070
-
Turnover of protein in growing and non-growing populations of Escherichia coli
-
Mandelstam J. 1958. Turnover of protein in growing and non-growing populations of Escherichia coli. Biochem J 69:110-119.
-
(1958)
Biochem J
, vol.69
, pp. 110-119
-
-
Mandelstam, J.1
-
49
-
-
53849093068
-
Much to know about proteolysis: Intricate proteolytic machineries compromise essential cellular functions
-
Marfany G, Farras R, Salido E, Xirodimas DP, Rodriguez MS. 2008. Much to know about proteolysis: Intricate proteolytic machineries compromise essential cellular functions. Biochem Soc Trans 36:781-785.
-
(2008)
Biochem Soc Trans
, vol.36
, pp. 781-785
-
-
Marfany, G.1
Farras, R.2
Salido, E.3
Xirodimas, D.P.4
Rodriguez, M.S.5
-
50
-
-
0013847020
-
The role of cell membranes in the freezing of yeast and other single cells
-
Mazur P. 1965. The role of cell membranes in the freezing of yeast and other single cells. Ann NYAcad Sci 125:658-676.
-
(1965)
Ann NYAcad Sci
, vol.125
, pp. 658-676
-
-
Mazur, P.1
-
51
-
-
0003918049
-
Some aspects of nitrogen and energy metabolism in cancerous subjects: A review
-
Mider GB. 1951. Some aspects of nitrogen and energy metabolism in cancerous subjects: A review. Cancer Res 11:821-829.
-
(1951)
Cancer Res
, vol.11
, pp. 821-829
-
-
Mider, G.B.1
-
52
-
-
55049114750
-
Novel drug target strategies against Mycobacterium tuberculosis
-
Murphy DJ, Brown JR. 2008. Novel drug target strategies against Mycobacterium tuberculosis. Curr Opin Microbiol 11:422-427.
-
(2008)
Curr Opin Microbiol
, vol.11
, pp. 422-427
-
-
Murphy, D.J.1
Brown, J.R.2
-
53
-
-
0345687188
-
Distinct peptide signals in the UmuD and UmuD0 subunits of UmuD/D0 mediate tethering and substrate processing by the ClpXP protease
-
Neher SB, Sauer RT, Baker TA. 2003. Distinct peptide signals in the UmuD and UmuD0 subunits of UmuD/D0 mediate tethering and substrate processing by the ClpXP protease. Proc Natl Acad Sci USA 100: 13219-13224.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 13219-13224
-
-
Neher, S.B.1
Sauer, R.T.2
Baker, T.A.3
-
54
-
-
0016711037
-
High resolution two-dimensional electrophoresis of proteins
-
O'Farrell PH. 1975. High resolution two-dimensional electrophoresis of proteins. J Biol Chem 250:4007-4021.
-
(1975)
J Biol Chem
, vol.250
, pp. 4007-4021
-
-
O'Farrell, P.H.1
-
55
-
-
41549133200
-
Proteasome inhibitors in cancer therapy: Lessons from the first decade
-
Orlowski RZ, Kuhn DJ. 2008. Proteasome inhibitors in cancer therapy: Lessons from the first decade. Clin Cancer Res 14:1649-1657.
-
(2008)
Clin Cancer Res
, vol.14
, pp. 1649-1657
-
-
Orlowski, R.Z.1
Kuhn, D.J.2
-
56
-
-
0033080750
-
Measuring protein synthesis by mass isotopomer distribution analysis (MIDA)
-
Papageorgopoulos C, Caldwell K, Shackleton C, Schweingrubber H, Hellerstein MK. 1999. Measuring protein synthesis by mass isotopomer distribution analysis (MIDA). Anal Biochem 267:1-16.
-
(1999)
Anal Biochem
, vol.267
, pp. 1-16
-
-
Papageorgopoulos, C.1
Caldwell, K.2
Shackleton, C.3
Schweingrubber, H.4
Hellerstein, M.K.5
-
58
-
-
50449111974
-
Protein degradation in bacteria
-
Podolsky RJ. 1953. Protein degradation in bacteria. Arch Biochem Biophys 45:327-340.
-
(1953)
Arch Biochem Biophys
, vol.45
, pp. 327-340
-
-
Podolsky, R.J.1
-
59
-
-
0036692065
-
Dynamics of protein turnover, a missing dimension in proteomics
-
Pratt JM, Petty J, Riba-Garcia I, Robertson DH, Gaskell SJ, Oliver SG, Beynon RJ. 2002. Dynamics of protein turnover, a missing dimension in proteomics. Mol Cell Proteomics 1:579-591.
-
(2002)
Mol Cell Proteomics
, vol.1
, pp. 579-591
-
-
Pratt, J.M.1
Petty, J.2
Riba-Garcia, I.3
Robertson, D.H.4
Gaskell, S.J.5
Oliver, S.G.6
Beynon, R.J.7
-
60
-
-
35248824646
-
Alternative equations for whole-body protein synthesis and for fractional synthetic rates of proteins
-
Ramakrishnan R. 2007. Alternative equations for whole-body protein synthesis and for fractional synthetic rates of proteins. Metabolism 56:1550-1560.
-
(2007)
Metabolism
, vol.56
, pp. 1550-1560
-
-
Ramakrishnan, R.1
-
61
-
-
74549118485
-
Principal component analysis of proteome dynamics in iron-starved Mycobacterium tuberculosis
-
Rao PK, Li Q. 2009. Principal component analysis of proteome dynamics in iron-starved Mycobacterium tuberculosis. J Proteomics Bioinform 2:19-31.
-
(2009)
J Proteomics Bioinform
, vol.2
, pp. 19-31
-
-
Rao, P.K.1
Li, Q.2
-
62
-
-
56449121252
-
Protein dynamics in ironstarved Mycobacterium tuberculosis revealed by turnover and abundance measurement using hybrid-linear ion trap-Fourier transform mass spectrometry
-
Rao PK, Rodriguez GM, Smith I, Li Q. 2008. Protein dynamics in ironstarved Mycobacterium tuberculosis revealed by turnover and abundance measurement using hybrid-linear ion trap-Fourier transform mass spectrometry. Anal Chem 80:6860-6869.
-
(2008)
Anal Chem
, vol.80
, pp. 6860-6869
-
-
Rao, P.K.1
Rodriguez, G.M.2
Smith, I.3
Li, Q.4
-
63
-
-
38349117099
-
Determination of global protein turnover in stressed mycobacterium cells using hybrid-linear ion trap-Fourier transform mass spectrometry
-
Rao PK, Roxas BA, Li Q. 2008. Determination of global protein turnover in stressed mycobacterium cells using hybrid-linear ion trap-Fourier transform mass spectrometry. Anal Chem 80:396-406.
-
(2008)
Anal Chem
, vol.80
, pp. 396-406
-
-
Rao, P.K.1
Roxas, B.A.2
Li, Q.3
-
64
-
-
0036285253
-
Hypoxic response of Mycobacterium tuberculosis studied by metabolic labeling and proteome analysis of cellular and extracellular proteins
-
Rosenkrands I, Slayden RA, Crawford J, Aagaard C, Barry CE, III, Andersen P. 2002. Hypoxic response of Mycobacterium tuberculosis studied by metabolic labeling and proteome analysis of cellular and extracellular proteins. J Bacteriol 184:3485-3491.
-
(2002)
J Bacteriol
, vol.184
, pp. 3485-3491
-
-
Rosenkrands, I.1
Slayden, R.A.2
Crawford, J.3
Aagaard, C.4
Barry, C.E.5
Iii Andersen, P.6
-
65
-
-
0036132470
-
Protein turnover plays a key role in aging
-
Ryazanov AG, Nefsky BS. 2002. Protein turnover plays a key role in aging. Mech Ageing Dev 123:207-213.
-
(2002)
Mech Ageing Dev
, vol.123
, pp. 207-213
-
-
Ryazanov, A.G.1
Nefsky, B.S.2
-
66
-
-
0242268400
-
Genetic requirements for mycobacterial survival during infection
-
Sassetti CM, Rubin EJ. 2003. Genetic requirements for mycobacterial survival during infection. Proc Natl Acad Sci USA 100:12989-12994.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 12989-12994
-
-
Sassetti, C.M.1
Rubin, E.J.2
-
67
-
-
0345701347
-
Genes required for mycobacterial growth defined by high density mutagenesis
-
Sassetti CM, Boyd DH, Rubin EJ. 2003. Genes required for mycobacterial growth defined by high density mutagenesis. Mol Microbiol 48: 77-84.
-
(2003)
Mol Microbiol
, vol.48
, pp. 77-84
-
-
Sassetti, C.M.1
Boyd, D.H.2
Rubin, E.J.3
-
69
-
-
0013596620
-
Deuterium as an indicator in the study of intermediary metabolism
-
Schoenheimer R, Rittenberg D. 1935. Deuterium as an indicator in the study of intermediary metabolism. Science 82:156-157.
-
(1935)
Science
, vol.82
, pp. 156-157
-
-
Schoenheimer, R.1
Rittenberg, D.2
-
70
-
-
37049219835
-
The application of the nitrogen isotope N15 for the study of protein metabolism
-
Schoenheimer R, Rittenberg D, Foster GL, Keston AS, Ratner S. 1938. The application of the nitrogen isotope N15 for the study of protein metabolism. Science 88:599-600.
-
(1938)
Science
, vol.88
, pp. 599-600
-
-
Schoenheimer, R.1
Rittenberg, D.2
Foster, G.L.3
Keston, A.S.4
Ratner, S.5
-
71
-
-
37049213212
-
The process of continuous deamination and reamination of amino acids in the proteins of normal animals
-
Schoenheimer R, Ratner S, Rittenberg D. 1939. The process of continuous deamination and reamination of amino acids in the proteins of normal animals. Science 89:272-273.
-
(1939)
Science
, vol.89
, pp. 272-273
-
-
Schoenheimer, R.1
Ratner, S.2
Rittenberg, D.3
-
72
-
-
44049092998
-
Protein exchange dynamics at chemoreceptor clusters in Escherichia coli
-
DOI 10.1073/pnas.0710611105
-
Schulmeister S, Ruttorf M, Thiem S, Kentner D, Lebiedz D, Sourjik V. 2008. Protein exchange dynamics at chemoreceptor clusters in Escherichia coli. Proc Natl Acad Sci USA 105:6403-6408. (Pubitemid 351758358)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.17
, pp. 6403-6408
-
-
Schulmeister, S.1
Ruttorf, M.2
Thiem, S.3
Kentner, D.4
Lebiedz, D.5
Sourjik, V.6
-
73
-
-
0001181931
-
Glucocorticoid stimulation of the biosynthesis of glutamic-alanine transaminase
-
Segal HL, Kim YS. 1963. Glucocorticoid stimulation of the biosynthesis of glutamic-alanine transaminase. Proc Natl Acad Sci USA 50:912-918.
-
(1963)
Proc Natl Acad Sci USA
, vol.50
, pp. 912-918
-
-
Segal, H.L.1
Kim, Y.S.2
-
74
-
-
46849117040
-
Quantitative analysis of isotope distributions in proteomic mass spectrometry using least-squares Fourier transform convolution
-
Sperling E, Bunner AE, Sykes MT, Williamson JR. 2008. Quantitative analysis of isotope distributions in proteomic mass spectrometry using least-squares Fourier transform convolution. Anal Chem 80:4906-4917.
-
(2008)
Anal Chem
, vol.80
, pp. 4906-4917
-
-
Sperling, E.1
Bunner, A.E.2
Sykes, M.T.3
Williamson, J.R.4
-
75
-
-
0014409858
-
Biochemical studies of bacterial sporulation and germination. VII. Protein turnover during Sporulation of Bacillus subtilis
-
Spudich JA, Kornberg A. 1968. Biochemical studies of bacterial sporulation and germination. VII. Protein turnover during Sporulation of Bacillus subtilis. J Biol Chem 243:4600-4605.
-
(1968)
J Biol Chem
, vol.243
, pp. 4600-4605
-
-
Spudich, J.A.1
Kornberg, A.2
-
76
-
-
3042765151
-
Novel linear quadrupole ion trap/FT mass spectrometer: Performance characterization and use in the comparative analysis of histone H3 posttranslational modifications
-
Syka JE, Marto JA, Bai DL, Horning S, SenkoMW, Schwartz JC, Ueberheide B, Garcia B, Busby S, Muratore T, Shabanowitz J, Hunt DF. 2004. Novel linear quadrupole ion trap/FT mass spectrometer: Performance characterization and use in the comparative analysis of histone H3 posttranslational modifications. J Proteome Res 3:621-626.
-
(2004)
J Proteome Res
, vol.3
, pp. 621-626
-
-
Syka, J.E.1
Marto, J.A.2
Bai, D.L.3
Horning, S.4
Senko, M.W.5
Schwartz, J.C.6
Ueberheide, B.7
Garcia, B.8
Busby, S.9
Muratore, T.10
Shabanowitz, J.11
Hunt, D.F.12
-
77
-
-
28444479853
-
An assembly landscape for the 30S ribosomal subunit
-
TalkingtonMW, Siuzdak G,Williamson JR. 2005. An assembly landscape for the 30S ribosomal subunit. Nature 438:628-632.
-
(2005)
Nature
, vol.438
, pp. 628-632
-
-
Talkington, M.W.1
Siuzdak, G.2
Williamson, J.R.3
-
78
-
-
33846634149
-
Pathway confirmation and flux analysis of central metabolic pathways in Desulfovibrio vulgaris hildenborough using gas chromatography- mass spectrometry and Fourier transform-ion cyclotron resonance mass spectrometry
-
Tang Y, Pingitore F, Mukhopadhyay A, Phan R, Hazen TC, Keasling JD. 2007. Pathway confirmation and flux analysis of central metabolic pathways in Desulfovibrio vulgaris hildenborough using gas chromatography- mass spectrometry and Fourier transform-ion cyclotron resonance mass spectrometry. J Bacteriol 189:940-949.
-
(2007)
J Bacteriol
, vol.189
, pp. 940-949
-
-
Tang, Y.1
Pingitore, F.2
Mukhopadhyay, A.3
Phan, R.4
Hazen, T.C.5
Keasling, J.D.6
-
79
-
-
33748627985
-
The PhoP/PhoQ two-component system stabilizes the alternative sigma factor RpoS in Salmonella enterica
-
Tu X, Latifi T, Bougdour A, Gottesman S, Groisman EA. 2006. The PhoP/PhoQ two-component system stabilizes the alternative sigma factor RpoS in Salmonella enterica. Proc Natl Acad Sci USA 103:13503-13508.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 13503-13508
-
-
Tu, X.1
Latifi, T.2
Bougdour, A.3
Gottesman, S.4
Groisman, E.A.5
-
80
-
-
38849083137
-
-
WHO. 2007. Tuberculosis Facts. http://www.who.int/tb/publications/2007/ factsheet-2007.pdf.
-
(2007)
Tuberculosis Facts
-
-
-
81
-
-
27344451113
-
The discovery of ubiquitin-dependent proteolysis
-
Wilkinson KD. 2005. The discovery of ubiquitin-dependent proteolysis. Proc Natl Acad Sci USA 102:15280-15282.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 15280-15282
-
-
Wilkinson, K.D.1
-
82
-
-
77957813800
-
Radioactive and stable isotope tracers in biomedicine: Principles and practice of kinetics analysis. NewYork,NY:Willey-Liss. Wosten MM. 1998. Eubacterial sigma-factors
-
Wolfe RR. 1992. Radioactive and stable isotope tracers in biomedicine: Principles and practice of kinetics analysis. NewYork,NY:Willey-Liss. Wosten MM. 1998. Eubacterial sigma-factors. FEMS Microbiol Rev 22: 127-150.
-
(1992)
FEMS Microbiol Rev
, vol.22
, pp. 127-150
-
-
Wolfe, R.R.1
-
83
-
-
41549114963
-
Determination of protein synthesis in vivo using labeling from deuterated water and analysis of MALDI-TOF spectrum
-
Xiao GG, Garg M, Lim S,Wong D, Go VL, Lee WN. 2008. Determination of protein synthesis in vivo using labeling from deuterated water and analysis of MALDI-TOF spectrum. J Appl Physiol 104:828-836.
-
(2008)
J Appl Physiol
, vol.104
, pp. 828-836
-
-
Xiao, G.G.1
Garg, M.2
Lim Swong, D.3
Go, V.L.4
Lee, W.N.5
-
84
-
-
55849133733
-
Identification of SCF ubiquitin ligase substrates by global protein stability profiling
-
Yen HC, Elledge SJ. 2008. Identification of SCF ubiquitin ligase substrates by global protein stability profiling. Science 322:923-929.
-
(2008)
Science
, vol.322
, pp. 923-929
-
-
Yen, H.C.1
Elledge, S.J.2
-
85
-
-
55849136903
-
Global protein stability profiling in mammalian cells
-
Yen HC, Xu Q, Chou DM, Zhao Z, Elledge SJ. 2008. Global protein stability profiling in mammalian cells. Science 322:918-923.
-
(2008)
Science
, vol.322
, pp. 918-923
-
-
Yen, H.C.1
Xu, Q.2
Chou, D.M.3
Zhao, Z.4
Elledge, S.J.5
-
86
-
-
4444329795
-
Fractional synthesis rates of DNA and protein in rabbit skin are not correlated
-
Zhang XJ, Chinkes DL, Wu Z, Martini WZ, Wolfe RR. 2004. Fractional synthesis rates of DNA and protein in rabbit skin are not correlated. J Nutr 134:2401-2406.
-
(2004)
J Nutr
, vol.134
, pp. 2401-2406
-
-
Zhang, X.J.1
Chinkes, D.L.2
Wu, Z.3
Martini, W.Z.4
Wolfe, R.R.5
-
87
-
-
60549095613
-
Quantitative proteomics: Measuring protein synthesis using (15)N amino acid labeling in pancreatic cancer cells
-
Zhao Y, Lee WN, Lim S, Go VL, Xiao J, Cao R, Zhang H, Recker RR, Xiao GG. 2009. Quantitative proteomics: Measuring protein synthesis using (15)N amino acid labeling in pancreatic cancer cells. Anal Chem 81:764-771.
-
(2009)
Anal Chem
, vol.81
, pp. 764-771
-
-
Zhao, Y.1
Lee, W.N.2
Lim, S.3
Go, V.L.4
Xiao, J.5
Cao, R.6
Zhang, H.7
Recker, R.R.8
Xiao, G.G.9
-
88
-
-
0035281566
-
The RssB response regulator directly targets sigma(S) for degradation by ClpXP
-
Zhou Y, Gottesman S, Hoskins JR, Maurizi MR,Wickner S. 2001. The RssB response regulator directly targets sigma(S) for degradation by ClpXP. Genes Dev 15:627-637.
-
(2001)
Genes Dev
, vol.15
, pp. 627-637
-
-
Zhou, Y.1
Gottesman, S.2
Hoskins, J.R.3
Maurizi Mrwickner, S.4
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