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Volumn 188, Issue 2, 2010, Pages 501-514

Widespread, ecologically relevant genetic markers developed from association mapping of climate-related traits in Sitka spruce (Picea sitchensis)

Author keywords

Association mapping; Budset; Clinal variation; Cold hardiness; Single nucleotide polymorphism; Sitka spruce (Picea sitchensis)

Indexed keywords

ADAPTATION; BUD; CLIMATE EFFECT; CLINE; COLD TOLERANCE; CONIFEROUS TREE; CONSERVATION GENETICS; ENVIRONMENTAL GRADIENT; GENE EXPRESSION; GENETIC ANALYSIS; GENETIC MARKER; GENETIC RESOURCE; GENETIC VARIATION; GROWTH RATE; LIFE HISTORY TRAIT; POLYMORPHISM; POPULATION STRUCTURE; VEGETATION MAPPING;

EID: 77957126038     PISSN: 0028646X     EISSN: 14698137     Source Type: Journal    
DOI: 10.1111/j.1469-8137.2010.03380.x     Document Type: Article
Times cited : (148)

References (52)
  • 3
    • 0033374429 scopus 로고    scopus 로고
    • Clines in polygenic traits
    • Barton NH. Clines in polygenic traits. Genetical Research 1999, 74:223-236.
    • (1999) Genetical Research , vol.74 , pp. 223-236
    • Barton, N.H.1
  • 5
    • 34547101679 scopus 로고    scopus 로고
    • Population management: potential impacts of advances in genomics
    • Burdon RD, Wilcox PL. Population management: potential impacts of advances in genomics. New Forests 2007, 34:187-206.
    • (2007) New Forests , vol.34 , pp. 187-206
    • Burdon, R.D.1    Wilcox, P.L.2
  • 6
    • 33646890005 scopus 로고    scopus 로고
    • Expansins: expanding importance in plant growth and development
    • Choi D, Cho HT, Yi L. Expansins: expanding importance in plant growth and development. Physiologia Plantarum 2006, 126:511-518.
    • (2006) Physiologia Plantarum , vol.126 , pp. 511-518
    • Choi, D.1    Cho, H.T.2    Yi, L.3
  • 8
    • 70350150367 scopus 로고    scopus 로고
    • Asssociation genetics of Coastal Douglas Fir (Pseudotsuga menziesii var. menziesii, Pinaceae). I. Cold-Hardiness Related Traits
    • Eckert AJ, Bower AD, Wegrzyn JL, Pande B, Jermstad KD, Krutovsky KV, St Clair JB, Neale DB. Asssociation genetics of Coastal Douglas Fir (Pseudotsuga menziesii var. menziesii, Pinaceae). I. Cold-Hardiness Related Traits. Genetics 2009, 182:1289-1302.
    • (2009) Genetics , vol.182 , pp. 1289-1302
    • Eckert, A.J.1    Bower, A.D.2    Wegrzyn, J.L.3    Pande, B.4    Jermstad, K.D.5    Krutovsky, K.V.6    St.Clair, J.B.7    Neale, D.B.8
  • 9
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study
    • Evanno G, Regnaut S, Goudet J. Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular Ecology 2005, 14:2611-2620.
    • (2005) Molecular Ecology , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 10
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin ver. 3.0: an integrated software package for population genetics data analysis
    • Excoffier L, Laval G, Schneider S. Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 2005, 1:47-50.
    • (2005) Evolutionary Bioinformatics Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 12
    • 24944547516 scopus 로고    scopus 로고
    • Strong spatial genetic structure in peripheral but not core populations of Sitka spruce Picea sitchensis (Bong.) Carr
    • Gapare WJ, Aitken SN. Strong spatial genetic structure in peripheral but not core populations of Sitka spruce Picea sitchensis (Bong.) Carr. Molecular Ecology 2005, 14:2659-2667.
    • (2005) Molecular Ecology , vol.14 , pp. 2659-2667
    • Gapare, W.J.1    Aitken, S.N.2
  • 13
    • 11144316605 scopus 로고    scopus 로고
    • Genetic diversity of core and peripheral Sitka spruce (Picea sitchensis (Bong.) Carr) populations: implications for conservation of widespread species
    • Gapare WJ, Aitken SN, Ritland CE. Genetic diversity of core and peripheral Sitka spruce (Picea sitchensis (Bong.) Carr) populations: implications for conservation of widespread species. Biological Conservation 2005, 123:113-123.
    • (2005) Biological Conservation , vol.123 , pp. 113-123
    • Gapare, W.J.1    Aitken, S.N.2    Ritland, C.E.3
  • 17
    • 33746040671 scopus 로고    scopus 로고
    • Potential effects of climate change on ecosystem and tree species distribution in British Columbia
    • Hamann A, Wang TL. Potential effects of climate change on ecosystem and tree species distribution in British Columbia. Ecology 2006, 87:2773-2786.
    • (2006) Ecology , vol.87 , pp. 2773-2786
    • Hamann, A.1    Wang, T.L.2
  • 19
    • 0036899010 scopus 로고    scopus 로고
    • SPAGEDi: a versatile computer program to analyse spatial genetic structure at the individual or population levels
    • Hardy OJ, Vekemans X. SPAGEDi: a versatile computer program to analyse spatial genetic structure at the individual or population levels. Molecular Ecology Notes 2002, 2:618-620.
    • (2002) Molecular Ecology Notes , vol.2 , pp. 618-620
    • Hardy, O.J.1    Vekemans, X.2
  • 20
    • 40349116120 scopus 로고    scopus 로고
    • Global monitoring of autumn gene expression within and among phenotypically divergent populations of Sitka spruce (Picea sitchensis)
    • Holliday JA, Ralph SG, White R, Bohlmann J, Aitken SN. Global monitoring of autumn gene expression within and among phenotypically divergent populations of Sitka spruce (Picea sitchensis). New Phytologist 2008, 178:103-122.
    • (2008) New Phytologist , vol.178 , pp. 103-122
    • Holliday, J.A.1    Ralph, S.G.2    White, R.3    Bohlmann, J.4    Aitken, S.N.5
  • 21
    • 77956566380 scopus 로고    scopus 로고
    • Postglacial history of a widespread conifer produces inverse clines in selective neutrality tests
    • Holliday JA, Yuen M, Ritland K, Aitken SN. Postglacial history of a widespread conifer produces inverse clines in selective neutrality tests. Molecular Ecology 2010
    • (2010) Molecular Ecology
    • Holliday, J.A.1    Yuen, M.2    Ritland, K.3    Aitken, S.N.4
  • 24
    • 34250372161 scopus 로고    scopus 로고
    • A Barley xyloglucan xyloglucosyl transferase covalently links xyloglucan, cellulosic substrates, and (1,3;1,4)-beta-D-Glucans
    • Hrmova M, Farkas V, Lahnstein J, Fincher GB. A Barley xyloglucan xyloglucosyl transferase covalently links xyloglucan, cellulosic substrates, and (1,3;1,4)-beta-D-Glucans. Journal of Biological Chemistry 2007, 282:12951-12962.
    • (2007) Journal of Biological Chemistry , vol.282 , pp. 12951-12962
    • Hrmova, M.1    Farkas, V.2    Lahnstein, J.3    Fincher, G.B.4
  • 25
    • 45849093336 scopus 로고    scopus 로고
    • Nucleotide polymoirphism and phenotypic associations within and around the phytochrome B2 locus in European aspen (Populus tremula, Salicaceae)
    • Ingvarsson PK, Garcia MV, Luquez V, Hall D, Jansson S. Nucleotide polymoirphism and phenotypic associations within and around the phytochrome B2 locus in European aspen (Populus tremula, Salicaceae). Genetics 2008, 178:2217-2226.
    • (2008) Genetics , vol.178 , pp. 2217-2226
    • Ingvarsson, P.K.1    Garcia, M.V.2    Luquez, V.3    Hall, D.4    Jansson, S.5
  • 26
    • 0034963629 scopus 로고    scopus 로고
    • Mapping of quantitative trait loci controlling adaptive traits in coastal Douglas-fir. I. Timing of vegetative bud flush
    • Jermstad KD, Bassoni DL, Jech KS, Wheeler NC, Neale DB. Mapping of quantitative trait loci controlling adaptive traits in coastal Douglas-fir. I. Timing of vegetative bud flush. Theoretical and Applied Genetics 2001a, 102:1142-1151.
    • (2001) Theoretical and Applied Genetics , vol.102 , pp. 1142-1151
    • Jermstad, K.D.1    Bassoni, D.L.2    Jech, K.S.3    Wheeler, N.C.4    Neale, D.B.5
  • 28
    • 0442307836 scopus 로고    scopus 로고
    • A role for expansins in dehydration and rehydration of the resurrection plant Craterostigma plantagineum
    • Jones L, McQueen-Mason S. A role for expansins in dehydration and rehydration of the resurrection plant Craterostigma plantagineum. FEBS Letters 2004, 559:61-65.
    • (2004) FEBS Letters , vol.559 , pp. 61-65
    • Jones, L.1    McQueen-Mason, S.2
  • 29
    • 70549108075 scopus 로고    scopus 로고
    • Frequent long-distance gene flow in a rare temperate forest tree (Sorbus domestica) at the landscape scale
    • Kamm U, Rotach P, Gugerli F, Siroky M, Edwards P, Holderegger R. Frequent long-distance gene flow in a rare temperate forest tree (Sorbus domestica) at the landscape scale. Heredity 2009, 103:476-482.
    • (2009) Heredity , vol.103 , pp. 476-482
    • Kamm, U.1    Rotach, P.2    Gugerli, F.3    Siroky, M.4    Edwards, P.5    Holderegger, R.6
  • 30
    • 72049116572 scopus 로고    scopus 로고
    • Plant conservation genetics in a changing world
    • Kramer AT, Havens K. Plant conservation genetics in a changing world. Trends in Plant Science 2009, 14:599-607.
    • (2009) Trends in Plant Science , vol.14 , pp. 599-607
    • Kramer, A.T.1    Havens, K.2
  • 32
    • 0345718511 scopus 로고    scopus 로고
    • Estimation of pairwise relatedness with molecular markers
    • Lynch M, Ritland K. Estimation of pairwise relatedness with molecular markers. Genetics 1999, 152:1753-1766.
    • (1999) Genetics , vol.152 , pp. 1753-1766
    • Lynch, M.1    Ritland, K.2
  • 33
    • 34547161806 scopus 로고    scopus 로고
    • Adaptive gradients and isolation-by-distance with postglacial migration in Picea sitchensis
    • Mimura M, Aitken SN. Adaptive gradients and isolation-by-distance with postglacial migration in Picea sitchensis. Heredity 2007, 99:224-232.
    • (2007) Heredity , vol.99 , pp. 224-232
    • Mimura, M.1    Aitken, S.N.2
  • 34
    • 49249097861 scopus 로고    scopus 로고
    • Scanning the genome for gene single nucleotide polymorphisms involved in adaptive population differentiation in white spruce
    • Namroud MC, Beaulieu J, Juge N, Laroche J, Bousquet J. Scanning the genome for gene single nucleotide polymorphisms involved in adaptive population differentiation in white spruce. Molecular Ecology 2008, 17:3599-3613.
    • (2008) Molecular Ecology , vol.17 , pp. 3599-3613
    • Namroud, M.C.1    Beaulieu, J.2    Juge, N.3    Laroche, J.4    Bousquet, J.5
  • 36
    • 3042745450 scopus 로고    scopus 로고
    • Association genetics of complex traits in conifers
    • Neale DB, Savolainen O. Association genetics of complex traits in conifers. Trends in Plant Science 2004, 9:325-330.
    • (2004) Trends in Plant Science , vol.9 , pp. 325-330
    • Neale, D.B.1    Savolainen, O.2
  • 37
    • 0031434649 scopus 로고    scopus 로고
    • Ectopic expression of oat phytochrome A in hybrid aspen changes critical daylength for growth and prevents cold acclimatization
    • Olsen JE, Junttila O, Nilsen J, Eriksson ME, Martinussen I, Olsson O, Sandberg G, Moritz T. Ectopic expression of oat phytochrome A in hybrid aspen changes critical daylength for growth and prevents cold acclimatization. Plant Journal 1997, 12:1339-1350.
    • (1997) Plant Journal , vol.12 , pp. 1339-1350
    • Olsen, J.E.1    Junttila, O.2    Nilsen, J.3    Eriksson, M.E.4    Martinussen, I.5    Olsson, O.6    Sandberg, G.7    Moritz, T.8
  • 38
    • 13144257707 scopus 로고    scopus 로고
    • The genetic theory of adaptation: a brief history
    • Orr HA. The genetic theory of adaptation: a brief history. Nature Reviews Genetics 2005, 6:119-127.
    • (2005) Nature Reviews Genetics , vol.6 , pp. 119-127
    • Orr, H.A.1
  • 39
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P. Inference of population structure using multilocus genotype data. Genetics 2000, 155:945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 40
    • 0034926475 scopus 로고    scopus 로고
    • How closely correlated are molecular and quantitative measures of genetic variation? A meta-analysis
    • Reed DH, Frankham R. How closely correlated are molecular and quantitative measures of genetic variation? A meta-analysis. Evolution 2001, 55:1095-1103.
    • (2001) Evolution , vol.55 , pp. 1095-1103
    • Reed, D.H.1    Frankham, R.2
  • 41
    • 0037329527 scopus 로고    scopus 로고
    • Correlation between fitness and genetic diversity
    • Reed DH, Frankham R. Correlation between fitness and genetic diversity. Conservation Biology 2003, 17:230-237.
    • (2003) Conservation Biology , vol.17 , pp. 230-237
    • Reed, D.H.1    Frankham, R.2
  • 46
    • 14844313712 scopus 로고    scopus 로고
    • Using genome scans of DNA polymorphism to infer adaptive population divergence
    • Storz JF. Using genome scans of DNA polymorphism to infer adaptive population divergence. Molecular Ecology 2005, 14:671-688.
    • (2005) Molecular Ecology , vol.14 , pp. 671-688
    • Storz, J.F.1
  • 47
    • 33845247794 scopus 로고    scopus 로고
    • Use of response functions in selecting lodgepole pine populations for future climates
    • Wang T, Hamann A, Yanchuk A, O'Neill GA, Aitken SN. Use of response functions in selecting lodgepole pine populations for future climates. Global Change Biology 2006, 12:2404-2416.
    • (2006) Global Change Biology , vol.12 , pp. 2404-2416
    • Wang, T.1    Hamann, A.2    Yanchuk, A.3    O'Neill, G.A.4    Aitken, S.N.5
  • 48
    • 15944364717 scopus 로고
    • Cold resistance and injury in woody plants
    • Weiser CJ. Cold resistance and injury in woody plants. Science 1970, 169:1269-1278.
    • (1970) Science , vol.169 , pp. 1269-1278
    • Weiser, C.J.1
  • 49
    • 15044360468 scopus 로고    scopus 로고
    • Mapping of quantitative trait loci controlling adaptive traits in coastal Douglas-fir. IV. Cold-hardiness QTL verification and candidate gene mapping
    • Wheeler NC, Jermstad KD, Krutovsky K, Aitken SN, Howe GT, Krakowski J, Neale DB. Mapping of quantitative trait loci controlling adaptive traits in coastal Douglas-fir. IV. Cold-hardiness QTL verification and candidate gene mapping. Molecular Breeding 2005, 15:145-156.
    • (2005) Molecular Breeding , vol.15 , pp. 145-156
    • Wheeler, N.C.1    Jermstad, K.D.2    Krutovsky, K.3    Aitken, S.N.4    Howe, G.T.5    Krakowski, J.6    Neale, D.B.7
  • 50
    • 0038736886 scopus 로고    scopus 로고
    • Study of early selection in tree breeding. 4. Efficiency of marker-aided early selection (MAES)
    • Wu HX. Study of early selection in tree breeding. 4. Efficiency of marker-aided early selection (MAES). Silvae Genetica 2002, 51:261-269.
    • (2002) Silvae Genetica , vol.51 , pp. 261-269
    • Wu, H.X.1
  • 51
    • 0347361672 scopus 로고    scopus 로고
    • Theoretical Basis of the Beavis Effect
    • Xu S. Theoretical Basis of the Beavis Effect. Genetics 2003, 165:2259-2268.
    • (2003) Genetics , vol.165 , pp. 2259-2268
    • Xu, S.1


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