메뉴 건너뛰기




Volumn 49, Issue 38, 2010, Pages 8415-8424

In vitro bypass of the major malondialdehyde-and base propenal-derived DNA adduct by human Y-family DNA polymerases κ, τ, and Rev1

Author keywords

[No Author keywords available]

Indexed keywords

ALDEHYDES; ESCHERICHIA COLI; GENES; LIQUID CHROMATOGRAPHY; MAMMALS; MASS SPECTROMETRY; OXIDATION; POLYMERS;

EID: 77957080930     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi1009024     Document Type: Article
Times cited : (24)

References (34)
  • 1
    • 0035313218 scopus 로고    scopus 로고
    • Endogenous DNA damage and mutation
    • Marnett, L. J. and Plastaras, J. P. (2001) Endogenous DNA damage and mutation Trends Genet. 17, 214-221
    • (2001) Trends Genet. , vol.17 , pp. 214-221
    • Marnett, L.J.1    Plastaras, J.P.2
  • 2
    • 0036900066 scopus 로고    scopus 로고
    • Genetic and environmental factors in cancer and neurodegenerative diseases
    • Migliore, L. and Coppede, F. (2002) Genetic and environmental factors in cancer and neurodegenerative diseases Mutat. Res. 512, 135-153
    • (2002) Mutat. Res. , vol.512 , pp. 135-153
    • Migliore, L.1    Coppede, F.2
  • 3
    • 0037098869 scopus 로고    scopus 로고
    • Oxidative DNA damage: Assessment of the role in carcinogenesis, atherosclerosis, and acquired immunodeficiency syndrome
    • Olinski, R., Gackowski, D., Foksinski, M., Rozalski, R., Roszkowski, K., and Jaruga, P. (2002) Oxidative DNA damage: assessment of the role in carcinogenesis, atherosclerosis, and acquired immunodeficiency syndrome Free Radical Biol. Med. 33, 192-200
    • (2002) Free Radical Biol. Med. , vol.33 , pp. 192-200
    • Olinski, R.1    Gackowski, D.2    Foksinski, M.3    Rozalski, R.4    Roszkowski, K.5    Jaruga, P.6
  • 4
    • 0033535371 scopus 로고    scopus 로고
    • Lipid peroxidation-DNA damage by malondialdehyde
    • Marnett, L. J. (1999) Lipid peroxidation-DNA damage by malondialdehyde Mutat. Res. 424, 83-95
    • (1999) Mutat. Res. , vol.424 , pp. 83-95
    • Marnett, L.J.1
  • 5
    • 38949209141 scopus 로고    scopus 로고
    • The chemical toxicology of 2-deoxyribose oxidation in DNA
    • Dedon, P. C. (2008) The chemical toxicology of 2-deoxyribose oxidation in DNA Chem. Res. Toxicol. 21, 206-219
    • (2008) Chem. Res. Toxicol. , vol.21 , pp. 206-219
    • Dedon, P.C.1
  • 6
    • 0023925368 scopus 로고
    • Identification of adducts formed by reaction of guanine nucleosides with malondialdehyde and structurally related aldehydes
    • Basu, A. K., O'Hara, S. M., Valladier, P., Stone, K., Mols, O., and Marnett, L. J. (1988) Identification of adducts formed by reaction of guanine nucleosides with malondialdehyde and structurally related aldehydes Chem. Res. Toxicol. 1, 53-59
    • (1988) Chem. Res. Toxicol. , vol.1 , pp. 53-59
    • Basu, A.K.1    O'Hara, S.M.2    Valladier, P.3    Stone, K.4    Mols, O.5    Marnett, L.J.6
  • 7
    • 0032530416 scopus 로고    scopus 로고
    • Indirect mutagenesis by oxidative DNA damage: Formation of the pyrimidopurinone adduct of deoxyguanosine by base propenal
    • Dedon, P. C., Plastaras, J. P., Rouzer, C. A., and Marnett, L. J. (1998) Indirect mutagenesis by oxidative DNA damage: formation of the pyrimidopurinone adduct of deoxyguanosine by base propenal Proc. Natl. Acad. Sci. U.S.A. 95, 11113-11116
    • (1998) Proc. Natl. Acad. Sci. U.S.A. , vol.95 , pp. 11113-11116
    • Dedon, P.C.1    Plastaras, J.P.2    Rouzer, C.A.3    Marnett, L.J.4
  • 14
    • 3042856777 scopus 로고    scopus 로고
    • Kinetic and thermodynamic analysis of the hydrolytic ring-opening of the malondialdehyde-deoxyguanosine adduct, 3-(2′-deoxy-beta- d -erythro-pentofuranosyl)- pyrimido[1,2-alpha]purin-10(3H)-one
    • Riggins, J. N., Daniels, J. S., Rouzer, C. A., and Marnett, L. J. (2004) Kinetic and thermodynamic analysis of the hydrolytic ring-opening of the malondialdehyde-deoxyguanosine adduct, 3-(2′-deoxy-beta- d -erythro-pentofuranosyl)- pyrimido[1,2-alpha]purin-10(3H)-one J. Am. Chem. Soc. 126, 8237-8243
    • (2004) J. Am. Chem. Soc. , vol.126 , pp. 8237-8243
    • Riggins, J.N.1    Daniels, J.S.2    Rouzer, C.A.3    Marnett, L.J.4
  • 15
    • 0030744202 scopus 로고    scopus 로고
    • Mutagenicity in Escherichia coli of the major DNA adduct derived from the endogenous mutagen malondialdehyde
    • Fink, S. P., Reddy, G. R., and Marnett, L. J. (1997) Mutagenicity in Escherichia coli of the major DNA adduct derived from the endogenous mutagen malondialdehyde Proc. Natl. Acad. Sci. U.S.A. 94, 8652-8657
    • (1997) Proc. Natl. Acad. Sci. U.S.A. , vol.94 , pp. 8652-8657
    • Fink, S.P.1    Reddy, G.R.2    Marnett, L.J.3
  • 16
    • 0344630253 scopus 로고    scopus 로고
    • Induction of frameshift and base pair substitution mutations by the major DNA adduct of the endogenous carcinogen malondialdehyde
    • VanderVeen, L. A., Hashim, M. F., Shyr, Y., and Marnett, L. J. (2003) Induction of frameshift and base pair substitution mutations by the major DNA adduct of the endogenous carcinogen malondialdehyde Proc. Natl. Acad. Sci. U.S.A. 100, 14247-14252
    • (2003) Proc. Natl. Acad. Sci. U.S.A. , vol.100 , pp. 14247-14252
    • Vanderveen, L.A.1    Hashim, M.F.2    Shyr, Y.3    Marnett, L.J.4
  • 17
    • 0033200360 scopus 로고    scopus 로고
    • A plethora of lesion-replicating DNA polymerases
    • Woodgate, R. (1999) A plethora of lesion-replicating DNA polymerases Genes Dev. 13, 2191-2195
    • (1999) Genes Dev. , vol.13 , pp. 2191-2195
    • Woodgate, R.1
  • 19
    • 33845255036 scopus 로고    scopus 로고
    • Site-specific synthesis of oligonucleotides containing malondialdehyde adducts of deoxyguanosine and deoxyadenosine via a postsynthetic modification strategy
    • Wang, H., Kozekov, I. D., Kozekova, A., Tamura, P. J., Marnett, L. J., Harris, T. M., and Rizzo, C. J. (2006) Site-specific synthesis of oligonucleotides containing malondialdehyde adducts of deoxyguanosine and deoxyadenosine via a postsynthetic modification strategy Chem. Res. Toxicol. 19, 1467-1474
    • (2006) Chem. Res. Toxicol. , vol.19 , pp. 1467-1474
    • Wang, H.1    Kozekov, I.D.2    Kozekova, A.3    Tamura, P.J.4    Marnett, L.J.5    Harris, T.M.6    Rizzo, C.J.7
  • 20
    • 0037202616 scopus 로고    scopus 로고
    • Replication of damaged DNA in mammalian cells: New solutions to an old problem
    • Lehmann, A. R. (2002) Replication of damaged DNA in mammalian cells: new solutions to an old problem Mutat. Res. 509, 23-34
    • (2002) Mutat. Res. , vol.509 , pp. 23-34
    • Lehmann, A.R.1
  • 21
    • 21244506437 scopus 로고    scopus 로고
    • Eukaryotic translesion synthesis DNA polymerases: Specificity of structure and function
    • Prakash, S., Johnson, R. E., and Prakash, L. (2005) Eukaryotic translesion synthesis DNA polymerases: specificity of structure and function Annu. Rev. Biochem. 74, 317-353
    • (2005) Annu. Rev. Biochem. , vol.74 , pp. 317-353
    • Prakash, S.1    Johnson, R.E.2    Prakash, L.3
  • 23
    • 0029952294 scopus 로고    scopus 로고
    • Thymine-thymine dimer bypass by yeast DNA polymerase zeta
    • Nelson, J. R., Lawrence, C. W., and Hinkle, D. C. (1996) Thymine-thymine dimer bypass by yeast DNA polymerase zeta Science 272, 1646-1649
    • (1996) Science , vol.272 , pp. 1646-1649
    • Nelson, J.R.1    Lawrence, C.W.2    Hinkle, D.C.3
  • 24
    • 59849129660 scopus 로고    scopus 로고
    • Translesion DNA synthesis by human DNA polymerase eta on templates containing a pyrimidopurinone deoxyguanosine adduct, 3-(2′-deoxy-beta- d -erythro-pentofuranosyl)pyrimido-[1,2-a]purin-10(3H)-one
    • Stafford, J. B., Eoff, R. L., Kozekova, A., Rizzo, C. J., Guengerich, F. P., and Marnett, L. J. (2009) Translesion DNA synthesis by human DNA polymerase eta on templates containing a pyrimidopurinone deoxyguanosine adduct, 3-(2′-deoxy-beta- d -erythro-pentofuranosyl)pyrimido-[1,2-a]purin-10(3H)- one Biochemistry 48, 471-480
    • (2009) Biochemistry , vol.48 , pp. 471-480
    • Stafford, J.B.1    Eoff, R.L.2    Kozekova, A.3    Rizzo, C.J.4    Guengerich, F.P.5    Marnett, L.J.6
  • 25
    • 70350714934 scopus 로고    scopus 로고
    • Structural and functional analysis of Sulfolobus solfataricus Y-family DNA polymerase Dpo4-catalyzed bypass of the malondialdehyde-deoxyguanosine adduct
    • Eoff, R. L., Stafford, J. B., Szekely, J., Rizzo, C. J., Egli, M., Guengerich, F. P., and Marnett, L. J. (2009) Structural and functional analysis of Sulfolobus solfataricus Y-family DNA polymerase Dpo4-catalyzed bypass of the malondialdehyde-deoxyguanosine adduct Biochemistry 48, 7079-7088
    • (2009) Biochemistry , vol.48 , pp. 7079-7088
    • Eoff, R.L.1    Stafford, J.B.2    Szekely, J.3    Rizzo, C.J.4    Egli, M.5    Guengerich, F.P.6    Marnett, L.J.7
  • 26
    • 2942753954 scopus 로고    scopus 로고
    • Efficient and error-free replication past a minor-groove DNA adduct by the sequential action of human DNA polymerases iota and kappa
    • Washington, M. T., Minko, I. G., Johnson, R. E., Wolfle, W. T., Harris, T. M., Lloyd, R. S., Prakash, S., and Prakash, L. (2004) Efficient and error-free replication past a minor-groove DNA adduct by the sequential action of human DNA polymerases iota and kappa Mol. Cell. Biol. 24, 5687-5693
    • (2004) Mol. Cell. Biol. , vol.24 , pp. 5687-5693
    • Washington, M.T.1    Minko, I.G.2    Johnson, R.E.3    Wolfle, W.T.4    Harris, T.M.5    Lloyd, R.S.6    Prakash, S.7    Prakash, L.8
  • 27
    • 25444516751 scopus 로고    scopus 로고
    • Human DNA polymerase iota promotes replication through a ring-closed minor-groove adduct that adopts a syn conformation in DNA
    • Wolfle, W. T., Johnson, R. E., Minko, I. G., Lloyd, R. S., Prakash, S., and Prakash, L. (2005) Human DNA polymerase iota promotes replication through a ring-closed minor-groove adduct that adopts a syn conformation in DNA Mol. Cell. Biol. 25, 8748-8754
    • (2005) Mol. Cell. Biol. , vol.25 , pp. 8748-8754
    • Wolfle, W.T.1    Johnson, R.E.2    Minko, I.G.3    Lloyd, R.S.4    Prakash, S.5    Prakash, L.6
  • 28
    • 33645241164 scopus 로고    scopus 로고
    • Replication past a trans-4-hydroxynonenal minor-groove adduct by the sequential action of human DNA polymerases iota and kappa
    • Wolfle, W. T., Johnson, R. E., Minko, I. G., Lloyd, R. S., Prakash, S., and Prakash, L. (2006) Replication past a trans-4-hydroxynonenal minor-groove adduct by the sequential action of human DNA polymerases iota and kappa Mol. Cell. Biol. 26, 381-386
    • (2006) Mol. Cell. Biol. , vol.26 , pp. 381-386
    • Wolfle, W.T.1    Johnson, R.E.2    Minko, I.G.3    Lloyd, R.S.4    Prakash, S.5    Prakash, L.6
  • 29
    • 69249101227 scopus 로고    scopus 로고
    • Structural and functional elucidation of the mechanism promoting error-prone synthesis by human DNA polymerase kappa opposite the 7,8-dihydro-8-oxo-2′-deoxyguanosine adduct
    • Irimia, A., Eoff, R. L., Guengerich, F. P., and Egli, M. (2009) Structural and functional elucidation of the mechanism promoting error-prone synthesis by human DNA polymerase kappa opposite the 7,8-dihydro-8-oxo-2′- deoxyguanosine adduct J. Biol. Chem. 284, 22467-22480
    • (2009) J. Biol. Chem. , vol.284 , pp. 22467-22480
    • Irimia, A.1    Eoff, R.L.2    Guengerich, F.P.3    Egli, M.4
  • 30
    • 53049095093 scopus 로고    scopus 로고
    • Kinetic analysis of translesion synthesis opposite bulky N2- and O6-alkylguanine DNA adducts by human DNA polymerase REV1
    • Choi, J. Y. and Guengerich, F. P. (2008) Kinetic analysis of translesion synthesis opposite bulky N2- and O6-alkylguanine DNA adducts by human DNA polymerase REV1 J. Biol. Chem. 283, 23645-23655
    • (2008) J. Biol. Chem. , vol.283 , pp. 23645-23655
    • Choi, J.Y.1    Guengerich, F.P.2
  • 31
    • 34547136494 scopus 로고    scopus 로고
    • Hydrogen bonding of 7,8-dihydro-8-oxodeoxyguanosine with a charged residue in the little finger domain determines miscoding events in Sulfolobus solfataricus DNA polymerase Dpo4
    • Eoff, R. L., Irimia, A., Angel, K. C., Egli, M., and Guengerich, F. P. (2007) Hydrogen bonding of 7,8-dihydro-8-oxodeoxyguanosine with a charged residue in the little finger domain determines miscoding events in Sulfolobus solfataricus DNA polymerase Dpo4 J. Biol. Chem. 282, 19831-19843
    • (2007) J. Biol. Chem. , vol.282 , pp. 19831-19843
    • Eoff, R.L.1    Irimia, A.2    Angel, K.C.3    Egli, M.4    Guengerich, F.P.5
  • 32
    • 23844454020 scopus 로고    scopus 로고
    • DNA adduct bypass polymerization by Sulfolobus solfataricus DNA polymerase Dpo4: Analysis and crystal structures of multiple base pair substitution and frameshift products with the adduct 1,N2-ethenoguanine
    • Zang, H., Goodenough, A. K., Choi, J. Y., Irimia, A., Loukachevitch, L. V., Kozekov, I. D., Angel, K. C., Rizzo, C. J., Egli, M., and Guengerich, F. P. (2005) DNA adduct bypass polymerization by Sulfolobus solfataricus DNA polymerase Dpo4: analysis and crystal structures of multiple base pair substitution and frameshift products with the adduct 1,N2-ethenoguanine J. Biol. Chem. 280, 29750-29764
    • (2005) J. Biol. Chem. , vol.280 , pp. 29750-29764
    • Zang, H.1    Goodenough, A.K.2    Choi, J.Y.3    Irimia, A.4    Loukachevitch, L.V.5    Kozekov, I.D.6    Angel, K.C.7    Rizzo, C.J.8    Egli, M.9    Guengerich, F.P.10
  • 33
    • 33746330759 scopus 로고    scopus 로고
    • Translesion synthesis across bulky N2-alkyl guanine DNA adducts by human DNA polymerase kappa
    • Choi, J. Y., Angel, K. C., and Guengerich, F. P. (2006) Translesion synthesis across bulky N2-alkyl guanine DNA adducts by human DNA polymerase kappa J. Biol. Chem. 281, 21062-21072
    • (2006) J. Biol. Chem. , vol.281 , pp. 21062-21072
    • Choi, J.Y.1    Angel, K.C.2    Guengerich, F.P.3
  • 34
    • 0035937823 scopus 로고    scopus 로고
    • NMR characterization of a DNA duplex containing the major acrolein-derived deoxyguanosine adduct gamma-OH-1,-N2-propano-2′- deoxyguanosine
    • de los Santos, C., Zaliznyak, T., and Johnson, F. (2001) NMR characterization of a DNA duplex containing the major acrolein-derived deoxyguanosine adduct gamma-OH-1,-N2-propano-2′-deoxyguanosine J. Biol. Chem. 276, 9077-9082
    • (2001) J. Biol. Chem. , vol.276 , pp. 9077-9082
    • De Los Santos, C.1    Zaliznyak, T.2    Johnson, F.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.