-
1
-
-
0032969002
-
Structural basis of T cell recognition
-
10.1146/annurev.immunol.17.1.369, 10358763
-
Garcia KC, Teyton L, Wilson IA. Structural basis of T cell recognition. Annu Rev Immunol 1999, 17:369-397. 10.1146/annurev.immunol.17.1.369, 10358763.
-
(1999)
Annu Rev Immunol
, vol.17
, pp. 369-397
-
-
Garcia, K.C.1
Teyton, L.2
Wilson, I.A.3
-
2
-
-
0030738184
-
Interactions of TCRs with MHC-peptide complexes: a quantitative basis for mechanistic models
-
10.1016/S0952-7915(97)80086-6, 9203420
-
Margulies DH. Interactions of TCRs with MHC-peptide complexes: a quantitative basis for mechanistic models. Curr Opin Immunol 1997, 9(3):390-395. 10.1016/S0952-7915(97)80086-6, 9203420.
-
(1997)
Curr Opin Immunol
, vol.9
, Issue.3
, pp. 390-395
-
-
Margulies, D.H.1
-
3
-
-
0036229026
-
Structural basis of T cell recognition of peptides bound to MHC molecules
-
Wang J-H, Reinherz E. Structural basis of T cell recognition of peptides bound to MHC molecules. Molecular Immunology 2001, 38:1039-1049.
-
(2001)
Molecular Immunology
, vol.38
, pp. 1039-1049
-
-
Wang, J.-H.1
Reinherz, E.2
-
4
-
-
0031895637
-
Mechanisms of MHC class I--restricted antigen processing
-
10.1146/annurev.immunol.16.1.323, 9597133
-
Pamer E, Cresswell P. Mechanisms of MHC class I--restricted antigen processing. Annu Rev Immunol 1998, 16:323-358. 10.1146/annurev.immunol.16.1.323, 9597133.
-
(1998)
Annu Rev Immunol
, vol.16
, pp. 323-358
-
-
Pamer, E.1
Cresswell, P.2
-
5
-
-
0035290730
-
Antigen processing by the proteasome
-
10.1038/35056572, 11265247
-
Kloetzel PM. Antigen processing by the proteasome. Nat Rev Mol Cell Biol 2001, 2(3):179-187. 10.1038/35056572, 11265247.
-
(2001)
Nat Rev Mol Cell Biol
, vol.2
, Issue.3
, pp. 179-187
-
-
Kloetzel, P.M.1
-
6
-
-
0037015624
-
ERAAP customizes peptides for MHC class I molecules in the endoplasmic reticulum
-
10.1038/nature01074, 12368856
-
Serwold T, Gonzalez F, Kim J, Jacob, Shastri N. ERAAP customizes peptides for MHC class I molecules in the endoplasmic reticulum. Nature 2002, 419(6906):480-483. 10.1038/nature01074, 12368856.
-
(2002)
Nature
, vol.419
, Issue.6906
, pp. 480-483
-
-
Serwold, T.1
Gonzalez, F.2
Kim, J.3
Jacob4
Shastri, N.5
-
7
-
-
0030886208
-
Two distinct proteolytic processes in the generation of a major histocompatibility complex class I-presented peptide
-
10.1073/pnas.94.20.10850, 23505, 9380723
-
Craiu A, Akopian T, Goldberg A, Rock KL. Two distinct proteolytic processes in the generation of a major histocompatibility complex class I-presented peptide. Proc Natl Acad Sci USA 1997, 94(20):10850-10855. 10.1073/pnas.94.20.10850, 23505, 9380723.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, Issue.20
, pp. 10850-10855
-
-
Craiu, A.1
Akopian, T.2
Goldberg, A.3
Rock, K.L.4
-
8
-
-
0027980319
-
Inhibitors of the proteasome block the degradation of most cell proteins and the generation of peptides presented on MHC class I molecules
-
10.1016/S0092-8674(94)90462-6, 8087844
-
Rock KL, Gramm C, Rothstein L, Clark K, Stein R, Dick L, Hwang D, Goldberg AL. Inhibitors of the proteasome block the degradation of most cell proteins and the generation of peptides presented on MHC class I molecules. Cell 1994, 78(5):761-771. 10.1016/S0092-8674(94)90462-6, 8087844.
-
(1994)
Cell
, vol.78
, Issue.5
, pp. 761-771
-
-
Rock, K.L.1
Gramm, C.2
Rothstein, L.3
Clark, K.4
Stein, R.5
Dick, L.6
Hwang, D.7
Goldberg, A.L.8
-
9
-
-
0032971227
-
Degradation of cell proteins and the generation of MHC class I-presented peptides
-
10.1146/annurev.immunol.17.1.739, 10358773
-
Rock KL, Goldberg AL. Degradation of cell proteins and the generation of MHC class I-presented peptides. Annu Rev Immunol 1999, 17:739-779. 10.1146/annurev.immunol.17.1.739, 10358773.
-
(1999)
Annu Rev Immunol
, vol.17
, pp. 739-779
-
-
Rock, K.L.1
Goldberg, A.L.2
-
10
-
-
0032514684
-
Cleavage motifs of the yeast 20 S proteasome β subunits deduced from digests of enolase 1
-
10.1073/pnas.95.21.12504, 22860, 9770515
-
Nussbaum AK, Dick TP, Keilholz W, Schirle M, Stevanović S, Dietz K, Heinemeyer W, Groll M, Wolf DH, Huber R, et al. Cleavage motifs of the yeast 20 S proteasome β subunits deduced from digests of enolase 1. Proc Nat Acad Sci 1998, 95:12504-12509. 10.1073/pnas.95.21.12504, 22860, 9770515.
-
(1998)
Proc Nat Acad Sci
, vol.95
, pp. 12504-12509
-
-
Nussbaum, A.K.1
Dick, T.P.2
Keilholz, W.3
Schirle, M.4
Stevanović, S.5
Dietz, K.6
Heinemeyer, W.7
Groll, M.8
Wolf, D.H.9
Huber, R.10
-
11
-
-
0030793290
-
The subunits MECL-1 and LMP2 are mutually required for incorporation into the 20 S proteasome
-
10.1073/pnas.94.17.8970, 22989, 9256419
-
Groettrup M, Standera S, Stohwasser R, Kloetzel PM. The subunits MECL-1 and LMP2 are mutually required for incorporation into the 20 S proteasome. Proc Natl Acad Sci USA 1997, 94(17):8970-8975. 10.1073/pnas.94.17.8970, 22989, 9256419.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, Issue.17
, pp. 8970-8975
-
-
Groettrup, M.1
Standera, S.2
Stohwasser, R.3
Kloetzel, P.M.4
-
12
-
-
0033980648
-
Processing of some antigens by the standard proteasome but not by the immunoproteasome results in poor presentation by dendritic cells
-
10.1016/S1074-7613(00)80163-6, 10661410
-
Morel S, Levy F, Burlet-Schiltz O, Brasseur F, Probst-Kepper M, Peitrequin AL, Monsarrat B, Van Velthoven, Cerottini JC, Boon T, et al. Processing of some antigens by the standard proteasome but not by the immunoproteasome results in poor presentation by dendritic cells. Immunity 2000, 12(1):107-117. 10.1016/S1074-7613(00)80163-6, 10661410.
-
(2000)
Immunity
, vol.12
, Issue.1
, pp. 107-117
-
-
Morel, S.1
Levy, F.2
Burlet-Schiltz, O.3
Brasseur, F.4
Probst-Kepper, M.5
Peitrequin, A.L.6
Monsarrat, B.7
Van Velthoven8
Cerottini, J.C.9
Boon, T.10
-
13
-
-
0035796461
-
Discrete cleavage motifs of constitutive and immunoproteasomes revealed by quantitative analysis of cleavage products
-
10.1084/jem.194.1.1, 2193442, 11435468
-
Toes E, Nussbaum AK, Degermann S, Schirle M, Emmerich NP, Kraft M, Laplace C, Zwinderman A, Dick TP, Muller J, et al. Discrete cleavage motifs of constitutive and immunoproteasomes revealed by quantitative analysis of cleavage products. J Exp Med 2001, 194(1):1-12. 10.1084/jem.194.1.1, 2193442, 11435468.
-
(2001)
J Exp Med
, vol.194
, Issue.1
, pp. 1-12
-
-
Toes, E.1
Nussbaum, A.K.2
Degermann, S.3
Schirle, M.4
Emmerich, N.P.5
Kraft, M.6
Laplace, C.7
Zwinderman, A.8
Dick, T.P.9
Muller, J.10
-
14
-
-
0028136465
-
Peptidase activities of proteasomes are differentially regulated by the major histocompatibility complex-encoded genes for LMP2 and LMP7
-
10.1073/pnas.91.20.9213, 44782, 7937744
-
Gaczynska M, Rock K, Spies T, Goldberg A. Peptidase activities of proteasomes are differentially regulated by the major histocompatibility complex-encoded genes for LMP2 and LMP7. Proc Natl Acad Sci USA 1994, 91(20):9213-9217. 10.1073/pnas.91.20.9213, 44782, 7937744.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, Issue.20
, pp. 9213-9217
-
-
Gaczynska, M.1
Rock, K.2
Spies, T.3
Goldberg, A.4
-
15
-
-
30744465074
-
Destructive cleavage of antigenic peptides either by the immunoproteasome or by the standard proteasome results in differential antigen presentation
-
Chapiro J, Claverol S, Piette F, Ma W, Stroobant V, Guillaume B, Gairin JE, Morel S, Burlet-Schiltz O, Monsarrat B, et al. Destructive cleavage of antigenic peptides either by the immunoproteasome or by the standard proteasome results in differential antigen presentation. J Immunol 2006, 176(2):1053-1061.
-
(2006)
J Immunol
, vol.176
, Issue.2
, pp. 1053-1061
-
-
Chapiro, J.1
Claverol, S.2
Piette, F.3
Ma, W.4
Stroobant, V.5
Guillaume, B.6
Gairin, J.E.7
Morel, S.8
Burlet-Schiltz, O.9
Monsarrat, B.10
-
16
-
-
0035074032
-
PAProC: a prediction algorithm for proteasomal cleavages available on the WWW
-
10.1007/s002510100300, 11345595
-
Nussbaum A, Kuttler C, Hadeler K, Rammensee H, Schild H. PAProC: a prediction algorithm for proteasomal cleavages available on the WWW. Immunogenetics 2001, 53(2):87-94. 10.1007/s002510100300, 11345595.
-
(2001)
Immunogenetics
, vol.53
, Issue.2
, pp. 87-94
-
-
Nussbaum, A.1
Kuttler, C.2
Hadeler, K.3
Rammensee, H.4
Schild, H.5
-
17
-
-
0034607546
-
An algorithm for the prediction of proteasomal cleavages
-
10.1006/jmbi.2000.3683, 10772860
-
Kuttler C, Nussbaum AK, Dick TP, Rammensee HG, Schild H, Hadeler KP. An algorithm for the prediction of proteasomal cleavages. J Mol Biol 2000, 298(3):417-429. 10.1006/jmbi.2000.3683, 10772860.
-
(2000)
J Mol Biol
, vol.298
, Issue.3
, pp. 417-429
-
-
Kuttler, C.1
Nussbaum, A.K.2
Dick, T.P.3
Rammensee, H.G.4
Schild, H.5
Hadeler, K.P.6
-
18
-
-
20844434026
-
Modeling the MHC class I pathway by combining predictions of proteasomal cleavage, TAP transport and MHC class I binding
-
10.1007/s00018-005-4528-2, 15868101
-
Tenzer S, Peters B, Bulik S, Schoor O, Lemmel C, Schatz MM, Kloetzel PM, Rammensee HG, Schild H, Holzhutter HG. Modeling the MHC class I pathway by combining predictions of proteasomal cleavage, TAP transport and MHC class I binding. Cell Mol Life Sci 2005, 62(9):1025-1037. 10.1007/s00018-005-4528-2, 15868101.
-
(2005)
Cell Mol Life Sci
, vol.62
, Issue.9
, pp. 1025-1037
-
-
Tenzer, S.1
Peters, B.2
Bulik, S.3
Schoor, O.4
Lemmel, C.5
Schatz, M.M.6
Kloetzel, P.M.7
Rammensee, H.G.8
Schild, H.9
Holzhutter, H.G.10
-
19
-
-
0345291184
-
A theoretical approach towards the identification of cleavage-determining amino acid motifs of the 20 S proteasome
-
10.1006/jmbi.1998.2530, 10047495
-
Holzhütter H, Frömmel C, Kloetzel P. A theoretical approach towards the identification of cleavage-determining amino acid motifs of the 20 S proteasome. J Mol Biol 1999, 286(4):1251-1265. 10.1006/jmbi.1998.2530, 10047495.
-
(1999)
J Mol Biol
, vol.286
, Issue.4
, pp. 1251-1265
-
-
Holzhütter, H.1
Frömmel, C.2
Kloetzel, P.3
-
20
-
-
0033849945
-
A kinetic model of vertebrate 20 S proteasome accounting for the generation of major proteolytic fragments from oligomeric peptide substrates
-
10.1016/S0006-3495(00)76374-0, 1301016, 10968984
-
Holzhutter HG, Kloetzel PM. A kinetic model of vertebrate 20 S proteasome accounting for the generation of major proteolytic fragments from oligomeric peptide substrates. Biophys J 2000, 79(3):1196-1205. 10.1016/S0006-3495(00)76374-0, 1301016, 10968984.
-
(2000)
Biophys J
, vol.79
, Issue.3
, pp. 1196-1205
-
-
Holzhutter, H.G.1
Kloetzel, P.M.2
-
21
-
-
0036096708
-
Prediction of proteasome cleavage motifs by neural networks
-
10.1093/protein/15.4.287, 11983929
-
Kesmir C, Nussbaum AK, Schild H, Detours V, Brunak S. Prediction of proteasome cleavage motifs by neural networks. Protein Eng 2002, 15(4):287-296. 10.1093/protein/15.4.287, 11983929.
-
(2002)
Protein Eng
, vol.15
, Issue.4
, pp. 287-296
-
-
Kesmir, C.1
Nussbaum, A.K.2
Schild, H.3
Detours, V.4
Brunak, S.5
-
22
-
-
17844385106
-
The role of the proteasome in generating cytotoxic T-cell epitopes: insights obtained from improved predictions of proteasomal cleavage
-
10.1007/s00251-005-0781-7, 15744535
-
Nielsen M, Lundegaard C, Lund O, Kesmir C. The role of the proteasome in generating cytotoxic T-cell epitopes: insights obtained from improved predictions of proteasomal cleavage. Immunogenetics 2005, 57(1-2):33-41. 10.1007/s00251-005-0781-7, 15744535.
-
(2005)
Immunogenetics
, vol.57
, Issue.1-2
, pp. 33-41
-
-
Nielsen, M.1
Lundegaard, C.2
Lund, O.3
Kesmir, C.4
-
23
-
-
23144433033
-
Pcleavage: an SVM based method for prediction of constitutive proteasome and immunoproteasome cleavage sites in antigenic sequences
-
10.1093/nar/gki587, 1160263, 15988831
-
Bhasin M, Raghava GPS. Pcleavage: an SVM based method for prediction of constitutive proteasome and immunoproteasome cleavage sites in antigenic sequences. Nucleic Acids Research 2005, 33:W202-W207. 10.1093/nar/gki587, 1160263, 15988831.
-
(2005)
Nucleic Acids Research
, vol.33
-
-
Bhasin, M.1
Raghava, G.P.S.2
-
24
-
-
0038350948
-
Predicting proteasomal cleavage sites: a comparison of available methods
-
10.1093/intimm/dxg084, 12807816
-
Saxová P, Buus S, Brunak S, Kesmir C. Predicting proteasomal cleavage sites: a comparison of available methods. International Immunology 2003, 15(7):781-787. 10.1093/intimm/dxg084, 12807816.
-
(2003)
International Immunology
, vol.15
, Issue.7
, pp. 781-787
-
-
Saxová, P.1
Buus, S.2
Brunak, S.3
Kesmir, C.4
-
25
-
-
84891308106
-
SRILM -- An Extensible Language Modeling Toolkit
-
Boulder, CO: Center for Spoken Language Research, JJ Ohala TMN, BL Derwing M, Hodge M, Wiebe GE
-
Stolcke A. SRILM -- An Extensible Language Modeling Toolkit. Proceedings of the International Conference of Spoken Language Processing 2002, 2:901-904. Boulder, CO: Center for Spoken Language Research, JJ Ohala TMN, BL Derwing M, Hodge M, Wiebe GE.
-
(2002)
Proceedings of the International Conference of Spoken Language Processing
, vol.2
, pp. 901-904
-
-
Stolcke, A.1
-
26
-
-
0034723134
-
Sequence signals for generation of antigenic peptides by the proteasome: implications for proteasomal cleavage mechanism
-
10.1006/jmbi.1999.3392, 10656797
-
Altuvia Y, Margalit H. Sequence signals for generation of antigenic peptides by the proteasome: implications for proteasomal cleavage mechanism. J Mol Biol 2000, 295(4):879-890. 10.1006/jmbi.1999.3392, 10656797.
-
(2000)
J Mol Biol
, vol.295
, Issue.4
, pp. 879-890
-
-
Altuvia, Y.1
Margalit, H.2
-
27
-
-
18744368784
-
EPIMHC: a curated database of MHC-binding peptides for customized computational vaccinology
-
Epub 2005 Jan 2118, 10.1093/bioinformatics/bti269, 15657103
-
Reche PA, Zhang H, Glutting JP, Reinherz EL. EPIMHC: a curated database of MHC-binding peptides for customized computational vaccinology. Bioinformatics 2005, 21(9):2140-2141. Epub 2005 Jan 2118, 10.1093/bioinformatics/bti269, 15657103.
-
(2005)
Bioinformatics
, vol.21
, Issue.9
, pp. 2140-2141
-
-
Reche, P.A.1
Zhang, H.2
Glutting, J.P.3
Reinherz, E.L.4
-
28
-
-
20944447214
-
The immune epitope database and analysis resource: from vision to blueprint
-
10.1371/journal.pbio.0030091, 1065705, 15760272
-
Peters B, Sidney J, Bourne P, Bui H, Buus S, Doh G, Fleri W, Kronenberg M, Kubo R, Lund O, et al. The immune epitope database and analysis resource: from vision to blueprint. PLoS Biol 2005, 3(3):e91. 10.1371/journal.pbio.0030091, 1065705, 15760272.
-
(2005)
PLoS Biol
, vol.3
, Issue.3
-
-
Peters, B.1
Sidney, J.2
Bourne, P.3
Bui, H.4
Buus, S.5
Doh, G.6
Fleri, W.7
Kronenberg, M.8
Kubo, R.9
Lund, O.10
-
29
-
-
0004040193
-
HIV Molecular Immunology 2006/2007
-
Los Alamos, New Mexico: Los Alamos National Laboratory, Theoretical Biology and Biophysics
-
HIV Molecular Immunology 2006/2007. 2007, Los Alamos, New Mexico: Los Alamos National Laboratory, Theoretical Biology and Biophysics.
-
(2007)
-
-
-
30
-
-
0029144601
-
Gibbs motif sampling detection of bacterial outer membrane protein repeats
-
Neuwald AF, Liu JS, Lawrence CE. Gibbs motif sampling detection of bacterial outer membrane protein repeats. Prot Sci 1995, 4:1618-1632.
-
(1995)
Prot Sci
, vol.4
, pp. 1618-1632
-
-
Neuwald, A.F.1
Liu, J.S.2
Lawrence, C.E.3
-
31
-
-
0016772212
-
Comparison of the predicted and observed secondary structure of T4 phage lysozyme
-
Matthews B. Comparison of the predicted and observed secondary structure of T4 phage lysozyme. Biochim Biophys Acta 1975, 405:442-451.
-
(1975)
Biochim Biophys Acta
, vol.405
, pp. 442-451
-
-
Matthews, B.1
-
32
-
-
5444249860
-
Enhancement to the RANKPEP resource for the prediction of peptide binding to MHC molecules using profiles
-
10.1007/s00251-004-0709-7, 15349703
-
Reche PA, Glutting J-P, Reinherz EL. Enhancement to the RANKPEP resource for the prediction of peptide binding to MHC molecules using profiles. Immunogenetics 2004, 56:405-419. 10.1007/s00251-004-0709-7, 15349703.
-
(2004)
Immunogenetics
, vol.56
, pp. 405-419
-
-
Reche, P.A.1
Glutting, J.-P.2
Reinherz, E.L.3
-
33
-
-
70449416038
-
Prediction of MHC-peptide binding: a systematic and comprehensive overview
-
10.2174/138161209789105162, 19860671
-
Lafuente EM, Reche PA. Prediction of MHC-peptide binding: a systematic and comprehensive overview. Curr Pharm Des 2009, 15(28):3209-3220. 10.2174/138161209789105162, 19860671.
-
(2009)
Curr Pharm Des
, vol.15
, Issue.28
, pp. 3209-3220
-
-
Lafuente, E.M.1
Reche, P.A.2
-
34
-
-
0036727207
-
Prediction of MHC class I binding peptides using profile motifs
-
10.1016/S0198-8859(02)00432-9, 12175724
-
Reche PA, Glutting JP, Reinherz EL. Prediction of MHC class I binding peptides using profile motifs. Hum Immunol 2002, 63(9):701-709. 10.1016/S0198-8859(02)00432-9, 12175724.
-
(2002)
Hum Immunol
, vol.63
, Issue.9
, pp. 701-709
-
-
Reche, P.A.1
Glutting, J.P.2
Reinherz, E.L.3
-
35
-
-
44649189266
-
Prediction of peptide-MHC binding using profiles
-
full_text, 18450001
-
Reche PA, Reinherz EL. Prediction of peptide-MHC binding using profiles. Methods Mol Biol 2007, 409:185-200. full_text, 18450001.
-
(2007)
Methods Mol Biol
, vol.409
, pp. 185-200
-
-
Reche, P.A.1
Reinherz, E.L.2
-
36
-
-
0023890867
-
Measuring the accuracy of diagnostic systems
-
10.1126/science.3287615, 3287615
-
Swets JA. Measuring the accuracy of diagnostic systems. Science 1988, 240(4857):1285-1293. 10.1126/science.3287615, 3287615.
-
(1988)
Science
, vol.240
, Issue.4857
, pp. 1285-1293
-
-
Swets, J.A.1
-
37
-
-
23644443226
-
Integrated modeling of the major events in the MHC class I antigen processing pathway
-
10.1110/ps.051352405, 2279325, 15987883
-
Dönnes P, Kohlbacher O. Integrated modeling of the major events in the MHC class I antigen processing pathway. Protein Science 2005, 14(8):2132-2140. 10.1110/ps.051352405, 2279325, 15987883.
-
(2005)
Protein Science
, vol.14
, Issue.8
, pp. 2132-2140
-
-
Dönnes, P.1
Kohlbacher, O.2
-
38
-
-
0000241978
-
Two decades of statistical language modeling: Where do we go from here?
-
Rosenfeld. Two decades of statistical language modeling: Where do we go from here?. Proceedings of the IEEE 2000, 88(8):1-11.
-
(2000)
Proceedings of the IEEE
, vol.88
, Issue.8
, pp. 1-11
-
-
Rosenfeld1
-
39
-
-
0036140164
-
Entropy and complexity of finite sequences as fluctuating quantities
-
10.1016/S0303-2647(01)00171-X, 11755485
-
Jimenez-Montano MA, Ebeling W, Pohl T, Rapp PE. Entropy and complexity of finite sequences as fluctuating quantities. Biosystems 2002, 64(1-3):23-32. 10.1016/S0303-2647(01)00171-X, 11755485.
-
(2002)
Biosystems
, vol.64
, Issue.1-3
, pp. 23-32
-
-
Jimenez-Montano, M.A.1
Ebeling, W.2
Pohl, T.3
Rapp, P.E.4
-
40
-
-
0028104182
-
Back-propagation and counter-propagation neural networks for phylogenetic classification of ribosomal RNA sequences
-
10.1093/nar/22.20.4291, 331947, 7937158
-
Wu C, Shivakumar S. Back-propagation and counter-propagation neural networks for phylogenetic classification of ribosomal RNA sequences. Nucleic Acids Res 1994, 22(20):4291-4299. 10.1093/nar/22.20.4291, 331947, 7937158.
-
(1994)
Nucleic Acids Res
, vol.22
, Issue.20
, pp. 4291-4299
-
-
Wu, C.1
Shivakumar, S.2
-
41
-
-
0029933832
-
Motif identification neural design for rapid and sensitive protein family search
-
Wu CH, Zhao S, Chen HL, Lo CJ, McLarty J. Motif identification neural design for rapid and sensitive protein family search. Comput Appl Biosci 1996, 12(2):109-118.
-
(1996)
Comput Appl Biosci
, vol.12
, Issue.2
, pp. 109-118
-
-
Wu, C.H.1
Zhao, S.2
Chen, H.L.3
Lo, C.J.4
McLarty, J.5
-
42
-
-
3242771511
-
Generation of major histocompatibility complex class I antigens: functional interplay between proteasomes and TPPII
-
10.1038/ni1090, 15224091
-
Kloetzel PM. Generation of major histocompatibility complex class I antigens: functional interplay between proteasomes and TPPII. Nat Immunol 2004, 5(7):661-669. 10.1038/ni1090, 15224091.
-
(2004)
Nat Immunol
, vol.5
, Issue.7
, pp. 661-669
-
-
Kloetzel, P.M.1
-
43
-
-
1842785206
-
A major role for TPPII in trimming proteasomal degradation products for MHC class I antigen presentation
-
10.1016/S1074-7613(04)00074-3, 15084277
-
Reits E, Neijssen J, Herberts C, Benckhuijsen W, Janssen L, Drijfhout JW, Neefjes J. A major role for TPPII in trimming proteasomal degradation products for MHC class I antigen presentation. Immunity 2004, 20(4):495-506. 10.1016/S1074-7613(04)00074-3, 15084277.
-
(2004)
Immunity
, vol.20
, Issue.4
, pp. 495-506
-
-
Reits, E.1
Neijssen, J.2
Herberts, C.3
Benckhuijsen, W.4
Janssen, L.5
Drijfhout, J.W.6
Neefjes, J.7
-
44
-
-
1842684993
-
Proteasomes get by with lots of help from their friends
-
10.1016/S1074-7613(04)00086-X, 15084265
-
Yewdell JW, Princiotta MF. Proteasomes get by with lots of help from their friends. Immunity 2004, 20(4):362-363. 10.1016/S1074-7613(04)00086-X, 15084265.
-
(2004)
Immunity
, vol.20
, Issue.4
, pp. 362-363
-
-
Yewdell, J.W.1
Princiotta, M.F.2
-
45
-
-
2942541735
-
Cross-presentation, dendritic cell subsets, and the generation of immunity to cellular antigens
-
10.1111/j.0105-2896.2004.00142.x, 15233723
-
Heath W, Belz T, Behrens G, Smith C, Forehan S, Parish I, Davey G, Wilson N, Carbone F, Villadangos J. Cross-presentation, dendritic cell subsets, and the generation of immunity to cellular antigens. Immunological Reviews 2004, 199(1):9-26. 10.1111/j.0105-2896.2004.00142.x, 15233723.
-
(2004)
Immunological Reviews
, vol.199
, Issue.1
, pp. 9-26
-
-
Heath, W.1
Belz, T.2
Behrens, G.3
Smith, C.4
Forehan, S.5
Parish, I.6
Davey, G.7
Wilson, N.8
Carbone, F.9
Villadangos, J.10
-
46
-
-
0034041033
-
Immunobiology of dendritic cells
-
10.1146/annurev.immunol.18.1.767, 10837075
-
Banchereau J, Briere F, Caux C, Davoust J, Lebecque S, Liu Y, Pulendran B, Palucka K. Immunobiology of dendritic cells. Annu Rev Immunol 2000, 18:767-811. 10.1146/annurev.immunol.18.1.767, 10837075.
-
(2000)
Annu Rev Immunol
, vol.18
, pp. 767-811
-
-
Banchereau, J.1
Briere, F.2
Caux, C.3
Davoust, J.4
Lebecque, S.5
Liu, Y.6
Pulendran, B.7
Palucka, K.8
-
47
-
-
0033525086
-
The sizes of peptides generated from protein by mammalian 26 and 20 S proteasomes. Implications for understanding the degradative mechanism and antigen presentation
-
10.1074/jbc.274.6.3363, 9920878
-
Kisselev AF, Akopian TN, Woo KM, Goldberg AL. The sizes of peptides generated from protein by mammalian 26 and 20 S proteasomes. Implications for understanding the degradative mechanism and antigen presentation. J Biol Chem 1999, 274(6):3363-3371. 10.1074/jbc.274.6.3363, 9920878.
-
(1999)
J Biol Chem
, vol.274
, Issue.6
, pp. 3363-3371
-
-
Kisselev, A.F.1
Akopian, T.N.2
Woo, K.M.3
Goldberg, A.L.4
-
48
-
-
0029066338
-
Two novel T cell epitope prediction algorithms based on MHC-binding motifs; comparison of predicted and published epitopes from Mycobacterium tuberculosis and HIV protein sequences
-
10.1016/0264-410X(94)00014-E, 7483779
-
Meister GE, Roberts CG, Berzofsky JA, De Groot AS. Two novel T cell epitope prediction algorithms based on MHC-binding motifs; comparison of predicted and published epitopes from Mycobacterium tuberculosis and HIV protein sequences. Vaccine 1995, 13(6):581-591. 10.1016/0264-410X(94)00014-E, 7483779.
-
(1995)
Vaccine
, vol.13
, Issue.6
, pp. 581-591
-
-
Meister, G.E.1
Roberts, C.G.2
Berzofsky, J.A.3
De Groot, A.S.4
-
49
-
-
39149096295
-
Precise score for the prediction of peptides cleaved by the proteasome
-
Epub 2008 Jan 2023, 10.1093/bioinformatics/btm616, 18216070
-
Ginodi I, Vider-Shalit T, Tsaban L, Louzoun Y. Precise score for the prediction of peptides cleaved by the proteasome. Bioinformatics 2008, 24(4):477-483. Epub 2008 Jan 2023, 10.1093/bioinformatics/btm616, 18216070.
-
(2008)
Bioinformatics
, vol.24
, Issue.4
, pp. 477-483
-
-
Ginodi, I.1
Vider-Shalit, T.2
Tsaban, L.3
Louzoun, Y.4
-
50
-
-
42949139524
-
A systematic assessment of MHC class II peptide binding predictions and evaluation of a consensus approach
-
10.1371/journal.pcbi.1000048, 2267221, 18389056
-
Wang P, Sidney J, Dow C, Mothe B, Sette A, Peters B. A systematic assessment of MHC class II peptide binding predictions and evaluation of a consensus approach. PLoS Comput Biol 2008, 4(4):e1000048. 10.1371/journal.pcbi.1000048, 2267221, 18389056.
-
(2008)
PLoS Comput Biol
, vol.4
, Issue.4
-
-
Wang, P.1
Sidney, J.2
Dow, C.3
Mothe, B.4
Sette, A.5
Peters, B.6
-
51
-
-
33645636041
-
Class I T-cell epitope prediction: Improvements using a combination of proteasome cleavage, TAP affinity, and MHC binding
-
10.1016/j.molimm.2005.12.013, 16524630
-
Doytchinova IA, Flower CR. Class I T-cell epitope prediction: Improvements using a combination of proteasome cleavage, TAP affinity, and MHC binding. Molecular Immunology 2006, 43(13):2037-2044. 10.1016/j.molimm.2005.12.013, 16524630.
-
(2006)
Molecular Immunology
, vol.43
, Issue.13
, pp. 2037-2044
-
-
Doytchinova, I.A.1
Flower, C.R.2
-
52
-
-
23844528191
-
An integrative approach to CTL epitope prediction: a combined algorithm integrating MHC class I binding, TAP transport efficiency, and proteasomal cleavage predictions
-
10.1002/eji.200425811, 15997466
-
Larsen MV, Lundegaard C, Lamberth K, Buus S, Brunak S, Lund O, Nielsen M. An integrative approach to CTL epitope prediction: a combined algorithm integrating MHC class I binding, TAP transport efficiency, and proteasomal cleavage predictions. Eur J Immunol 2005, 35(8):2295-2303. 10.1002/eji.200425811, 15997466.
-
(2005)
Eur J Immunol
, vol.35
, Issue.8
, pp. 2295-2303
-
-
Larsen, M.V.1
Lundegaard, C.2
Lamberth, K.3
Buus, S.4
Brunak, S.5
Lund, O.6
Nielsen, M.7
|