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Volumn 185, Issue 1, 2010, Pages 11-21

Structure prediction-driven genetics in Saccharomyces cerevisiae identifies an interface between the t-RPA proteins Stn1 and Ten1

Author keywords

[No Author keywords available]

Indexed keywords

REPLICATION FACTOR A; STN1 PROTEIN; TEN1 PROTEIN; UNCLASSIFIED DRUG; AMINO ACID; CELL CYCLE PROTEIN; NONHISTONE PROTEIN; RECOMBINANT PROTEIN; SACCHAROMYCES CEREVISIAE PROTEIN; STN1 PROTEIN, S CEREVISIAE; TELOMERE BINDING PROTEIN; TEN1 PROTEIN, S CEREVISIAE;

EID: 77956623844     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.109.111922     Document Type: Article
Times cited : (11)

References (35)
  • 1
    • 0036798283 scopus 로고    scopus 로고
    • Delineation of the high-affinity single-stranded telomeric DNA-binding domain of Saccharomyces cerevisiae Cdc13
    • ANDERSON, E. M., W. A. HALSEY and D. S. WUTTKE, 2002 Delineation of the high-affinity single-stranded telomeric DNA-binding domain of Saccharomyces cerevisiae Cdc13. Nucleic Acids Res. 30: 4305-4313.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 4305-4313
    • Anderson, E.M.1    Halsey, W.A.2    Wuttke, D.S.3
  • 2
    • 0141868298 scopus 로고    scopus 로고
    • The Ku heterodimer performs separable activities at double-strand breaks and chromosome termini
    • BERTUCH, A. A., and V. LUNDBLAD, 2003 The Ku heterodimer performs separable activities at double-strand breaks and chromosome termini. Mol. Cell. Biol. 23: 8202-8215.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 8202-8215
    • Bertuch, A.A.1    Lundblad, V.2
  • 3
    • 4944265507 scopus 로고    scopus 로고
    • Delivery of yeast telomerase to a DNA break depends on the recruitment functions of Cdc13 and Est1
    • BIANCHI, A., S. NEGRINI and D. SHORE, 2004 Delivery of yeast telomerase to a DNA break depends on the recruitment functions of Cdc13 and Est1. Mol. Cell 16: 139-146.
    • (2004) Mol. Cell , vol.16 , pp. 139-146
    • Bianchi, A.1    Negrini, S.2    Shore, D.3
  • 4
    • 0033575671 scopus 로고    scopus 로고
    • The crystal structure of the complex of replication protein a subunits RPA32 and RPA14 reveals a mechanism for single-stranded DNA binding
    • BOCHKAREV, A., E. BOCHKAREVA, L. FRAPPIER and A. M. EDWARDS, 1999 The crystal structure of the complex of replication protein A subunits RPA32 and RPA14 reveals a mechanism for single-stranded DNA binding. EMBO J. 18: 4498-4504.
    • (1999) EMBO J. , vol.18 , pp. 4498-4504
    • Bochkarev, A.1    Bochkareva, E.2    Frappier, L.3    Edwards, A.M.4
  • 5
    • 0037007223 scopus 로고    scopus 로고
    • Structure of the RPA trimerization core and its role in the multistep DNA-binding mechanism of RPA
    • BOCHKAREVA, E., S. KOROLEV, S. P. LEES-MILLER and A. BOCHKAREV, 2002 Structure of the RPA trimerization core and its role in the multistep DNA-binding mechanism of RPA. EMBOJ. 21: 1855-1863.
    • (2002) EMBOJ. , vol.21 , pp. 1855-1863
    • Bochkareva, E.1    Korolev, S.2    Lees-Miller, S.P.3    Bochkarev, A.4
  • 6
    • 67649653968 scopus 로고    scopus 로고
    • Multiple pathways regulate 3′ overhang generation at S. cerevisiae telomeres
    • BONETTI, D., M. MARTINA, M. CLERICI, G. LUCCHINI and M. P. LONGHESE, 2009 Multiple pathways regulate 3′ overhang generation at S. cerevisiae telomeres. Mol. Cell 35: 70-81.
    • (2009) Mol. Cell , vol.35 , pp. 70-81
    • Bonetti, D.1    Martina, M.2    Clerici, M.3    Lucchini, G.4    Longhese, M.P.5
  • 7
    • 0035115859 scopus 로고    scopus 로고
    • Cdc13 both positively and negatively regulates telomere replication
    • CHANDRA, A., T. R. HUGHES, C. I. NUGENT and V. LUNDBLAD, 2001 Cdc13 both positively and negatively regulates telomere replication. Genes Dev. 15: 404-414.
    • (2001) Genes Dev. , vol.15 , pp. 404-414
    • Chandra, A.1    Hughes, T.R.2    Nugent, C.I.3    Lundblad, V.4
  • 8
    • 35748971020 scopus 로고    scopus 로고
    • Structure of the full-length human RPA14/32 complex gives insights into the mechanism of DNA binding and complex formation
    • DENG, X., J. E. HABEL, V. KABALEESWARAN, E. H. SNELL, M. S. WOLD et al., 2007 Structure of the full-length human RPA14/32 complex gives insights into the mechanism of DNA binding and complex formation. J. Mol. Biol. 374: 865-876.
    • (2007) J. Mol. Biol. , vol.374 , pp. 865-876
    • Deng, X.1    Habel, J.E.2    Kabaleeswaran, V.3    Snell, E.H.4    Wold, M.S.5
  • 9
    • 40049097395 scopus 로고    scopus 로고
    • Genomics. Reconstruction of the genomes
    • ENDY, D., 2008 Genomics. Reconstruction of the genomes. Science 319: 1196-1197.
    • (2008) Science , vol.319 , pp. 1196-1197
    • Endy, D.1
  • 10
    • 0036861668 scopus 로고    scopus 로고
    • The Est1 subunit of Saccharomyces cerevisiae telomerase makes multiple contributions to telomere length maintenance
    • EVANS, S. K., and V. LUNDBLAD, 2002 The Est1 subunit of Saccharomyces cerevisiae telomerase makes multiple contributions to telomere length maintenance. Genetics 162: 1101-1115.
    • (2002) Genetics , vol.162 , pp. 1101-1115
    • Evans, S.K.1    Lundblad, V.2
  • 11
    • 33750431337 scopus 로고    scopus 로고
    • Regulation of telomere elongation by the cyclin-dependent kinase CDK1
    • FRANK, C. J., M. HYDE and C. W. GREIDER, 2006 Regulation of telomere elongation by the cyclin-dependent kinase CDK1. Mol. Cell 24: 423-432.
    • (2006) Mol. Cell , vol.24 , pp. 423-432
    • Frank, C.J.1    Hyde, M.2    Greider, C.W.3
  • 13
    • 0028822203 scopus 로고
    • Single-stranded DNA arising at telomeres in cdc13 mutants may constitute a specific signal for the RAD9 checkpoint
    • GARVIK, B., M. CARSON and L. HARTWELL, 1995 Single-stranded DNA arising at telomeres in cdc13 mutants may constitute a specific signal for the RAD9 checkpoint. Mol. Cell. Biol. 15: 6128-6138.
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 6128-6138
    • Garvik, B.1    Carson, M.2    Hartwell, L.3
  • 14
    • 73349109843 scopus 로고    scopus 로고
    • Telomere capping proteins are structurally related to RPA with an additional telomere-specific domain
    • GELINAS, A. D., M. PASCHINI, F. E. REYES, A. HEROUX, R. T. BATEY et al., 2009 Telomere capping proteins are structurally related to RPA with an additional telomere-specific domain. Proc. Natl. Acad. Sci. USA 106: 19298-19303.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 19298-19303
    • Gelinas, A.D.1    Paschini, M.2    Reyes, F.E.3    Heroux, A.4    Batey, R.T.5
  • 15
    • 0031029001 scopus 로고    scopus 로고
    • Stn1, a new Saccharomyces cerevisiae protein, is implicated in telomere size regulation in association with Cdc13
    • GRANDIN, N., S. I. REED and M. CHARBONNEAU, 1997 Stn1, a new Saccharomyces cerevisiae protein, is implicated in telomere size regulation in association with Cdc13. Genes Dev. 11: 512-527.
    • (1997) Genes Dev. , vol.11 , pp. 512-527
    • Grandin, N.1    Reed, S.I.2    Charbonneau, M.3
  • 16
    • 0035282781 scopus 로고    scopus 로고
    • Ten1 functions in telomere end protection and length regulation in association with Stn1 and Cdc13
    • GRANDIN, N., C. DAMON and M. CHARBONNEAU, 2001 Ten1 functions in telomere end protection and length regulation in association with Stn1 and Cdc13. EMBO J. 20: 1173-1183.
    • (2001) EMBO J. , vol.20 , pp. 1173-1183
    • Grandin, N.1    Damon, C.2    Charbonneau, M.3
  • 17
    • 7244220162 scopus 로고    scopus 로고
    • DNA end resection, homologous recombination and DNA damage checkpoint activation require CDK1
    • IRA, G., A. PELLICIOLI, A. BALIJJA, X. WANG, S. FIORANI et al., 2004 DNA end resection, homologous recombination and DNA damage checkpoint activation require CDK1. Nature 431: 1011-1017.
    • (2004) Nature , vol.431 , pp. 1011-1017
    • Ira, G.1    Pellicioli, A.2    Balijja, A.3    Wang, X.4    Fiorani, S.5
  • 18
    • 0030455820 scopus 로고    scopus 로고
    • Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast
    • JAMES, P., J. HALLADAY and E. A. CRAIG, 1996 Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast. Genetics 144: 1425-1436.
    • (1996) Genetics , vol.144 , pp. 1425-1436
    • James, P.1    Halladay, J.2    Craig, E.A.3
  • 19
    • 30344452280 scopus 로고    scopus 로고
    • SAM-T04: What is new in protein-structure prediction for CASP6
    • KARPLUS, K., S. KATZMAN, G. SHACKLEFORD, M. KOEVA, J. DRAPER et al., 2005 SAM-T04: what is new in protein-structure prediction for CASP6. Proteins 61(Suppl 7): 135-142.
    • (2005) Proteins , vol.61 , Issue.SUPPL. 7 , pp. 135-142
    • Karplus, K.1    Katzman, S.2    Shackleford, G.3    Koeva, M.4    Draper, J.5
  • 20
    • 0030455861 scopus 로고    scopus 로고
    • Senescence mutants of Saccharomyces cerevisiae with a defect in telomere replication identify three additional EST genes
    • LENDVAY, T. S., D. K. MORRIS, J. SAH, B. BALASUBRAMANIAN and V. LUNDBLAD, 1996 Senescence mutants of Saccharomyces cerevisiae with a defect in telomere replication identify three additional EST genes. Genetics 144: 1399-1412.
    • (1996) Genetics , vol.144 , pp. 1399-1412
    • Lendvay, T.S.1    Morris, D.K.2    Sah, J.3    Balasubramanian, B.4    Lundblad, V.5
  • 21
    • 0028882869 scopus 로고
    • Yeast checkpoint genes in DNA damage processing: Implications for repair and arrest
    • LYDALL, D., and T. WEINERT, 1995 Yeast checkpoint genes in DNA damage processing: implications for repair and arrest. Science 270: 1488-1491.
    • (1995) Science , vol.270 , pp. 1488-1491
    • Lydall, D.1    Weinert, T.2
  • 23
    • 53649104599 scopus 로고    scopus 로고
    • Sae2, Exo1 and Sgs1 collaborate in DNA double-strand break processing
    • MIMITOU, E. P., and L. S. SYMINGTON, 2008 Sae2, Exo1 and Sgs1 collaborate in DNA double-strand break processing. Nature 455: 770-774.
    • (2008) Nature , vol.455 , pp. 770-774
    • Mimitou, E.P.1    Symington, L.S.2
  • 24
    • 0029845892 scopus 로고    scopus 로고
    • Cdc13p: A single-strand telomeric DNA-binding protein with a dual role in yeast telomere maintenance
    • NUGENT, C. I., T. R. HUGHES, N. F. LUE and V. LUNDBLAD, 1996 Cdc13p: a single-strand telomeric DNA-binding protein with a dual role in yeast telomere maintenance. Science 274: 249-252.
    • (1996) Science , vol.274 , pp. 249-252
    • Nugent, C.I.1    Hughes, T.R.2    Lue, N.F.3    Lundblad, V.4
  • 25
    • 0035830494 scopus 로고    scopus 로고
    • Cdc13 delivers separate complexes to the telomere for end protection and replication
    • DOI 10.1016/S0092-8674(01)00226-4
    • PENNOCK, E., K. BUCKLEY and V. LUNDBLAD, 2001 Cdc13 delivers separate complexes to the telomere for end protection and replication. Cell 104: 387-396. (Pubitemid 32206459)
    • (2001) Cell , vol.104 , Issue.3 , pp. 387-396
    • Pennock, E.1    Buckley, K.2    Lundblad, V.3
  • 26
    • 37249081098 scopus 로고    scopus 로고
    • The role of Stn1p in Saccharomyces cerevisiae telomere capping can be separated from its interaction with Cdc13p
    • PETREACA, R. C., H. C. CHIU and C. I. NUGENT, 2007 The role of Stn1p in Saccharomyces cerevisiae telomere capping can be separated from its interaction with Cdc13p. Genetics 177: 1459-1474.
    • (2007) Genetics , vol.177 , pp. 1459-1474
    • Petreaca, R.C.1    Chiu, H.C.2    Nugent, C.I.3
  • 27
    • 51049092483 scopus 로고    scopus 로고
    • Distinct roles for yeast Stn1 in telomere capping and telomerase inhibition
    • PUGLISI, A., A. BIANCHI, L. LEMMENS, P. DAMAY and D. SHORE, 2008 Distinct roles for yeast Stn1 in telomere capping and telomerase inhibition. EMBO J. 27: 2328-2339.
    • (2008) EMBO J. , vol.27 , pp. 2328-2339
    • Puglisi, A.1    Bianchi, A.2    Lemmens, L.3    Damay, P.4    Shore, D.5
  • 28
    • 23144452044 scopus 로고    scopus 로고
    • The HHpred interactive server for protein homology detection and structure prediction
    • SÖDING, J., A. BIEGERT and A. N. LUPAS, 2005 The HHpred interactive server for protein homology detection and structure prediction. Nucleic Acids Res. 33: W244-W248.
    • (2005) Nucleic Acids Res. , vol.33
    • Söding, J.1    Biegert, A.2    Lupas, A.N.3
  • 29
    • 72849112077 scopus 로고    scopus 로고
    • Stn1-Ten1 is an Rpa2-Rpa3-like complex at telomeres
    • SUN, J., E. Y. YU, Y. YANG, L. A. CONFER, S. H. SUN et al., 2009 Stn1-Ten1 is an Rpa2-Rpa3-like complex at telomeres. Genes Dev. 23: 2900-2914.
    • (2009) Genes Dev. , vol.23 , pp. 2900-2914
    • Sun, J.1    Yu, E.Y.2    Yang, Y.3    Confer, L.A.4    Sun, S.H.5
  • 30
    • 33749059184 scopus 로고    scopus 로고
    • DNA degradation at unprotected telomeres in yeast is regulated by the CDK1 (CDC28/Clb) cell cycle kinase
    • VODENICHAROV, M. D., and R. J. WELLINGER, 2006 DNA degradation at unprotected telomeres in yeast is regulated by the CDK1 (CDC28/Clb) cell cycle kinase. Mol. Cell 24: 127-137.
    • (2006) Mol. Cell , vol.24 , pp. 127-137
    • Vodenicharov, M.D.1    Wellinger, R.J.2
  • 31
    • 0027212282 scopus 로고
    • Cell cycle arrest of cdc mutants and specificity of the RAD9 checkpoint
    • WEINERT, T. A., and L. H. HARTWELL, 1993 Cell cycle arrest of cdc mutants and specificity of the RAD9 checkpoint. Genetics 134: 63-80.
    • (1993) Genetics , vol.134 , pp. 63-80
    • Weinert, T.A.1    Hartwell, L.H.2
  • 32
    • 0030908093 scopus 로고    scopus 로고
    • Replication protein a: A heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism
    • WOLD, M. S., 1997 Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism. Ann. Rev. Biochem. 66: 61-92.
    • (1997) Ann. Rev. Biochem. , vol.66 , pp. 61-92
    • Wold, M.S.1
  • 33
    • 39449115394 scopus 로고    scopus 로고
    • I-TASSER server for protein 3D structure prediction
    • ZHANG, Y., 2008 I-TASSER server for protein 3D structure prediction. BMC Bioinformatics 9: 40.
    • (2008) BMC Bioinformatics , vol.9 , pp. 40
    • Zhang, Y.1
  • 34
    • 17644392830 scopus 로고    scopus 로고
    • TM-align: A protein structure alignment algorithm based on the TM-score
    • DOI 10.1093/nar/gki524
    • ZHANG, Y., and J. SKOLNICK, 2005 TM-align: a protein structure alignment algorithm based on the TM-score. Nucleic Acids Res. 33: 2302-2309. (Pubitemid 41439897)
    • (2005) Nucleic Acids Research , vol.33 , Issue.7 , pp. 2302-2309
    • Zhang, Y.1    Skolnick, J.2
  • 35
    • 51549095956 scopus 로고    scopus 로고
    • Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends
    • ZHU, Z., W. H. CHUNG, E. Y. SHIM, S. E. LEE and G. IRA, 2008 Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends. Cell 134: 981-994.
    • (2008) Cell , vol.134 , pp. 981-994
    • Zhu, Z.1    Chung, W.H.2    Shim, E.Y.3    Lee, S.E.4    Ira, G.5


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