메뉴 건너뛰기




Volumn 18, Issue 16, 1999, Pages 4498-4504

The crystal structure of the complex of replication protein A subunits RPA32 and RPA14 reveals a mechanism for single-stranded DNA binding

Author keywords

Crystal structure; OB fold; Replication protein A; Single stranded DNA

Indexed keywords

DNA; DNA BINDING PROTEIN; REPLICATION PROTEIN A;

EID: 0033575671     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/18.16.4498     Document Type: Article
Times cited : (154)

References (30)
  • 1
    • 0029759341 scopus 로고    scopus 로고
    • Single-stranded-DNA binding alters human replication protein A structure and facilitates interaction with DNA-dependent protein kinase
    • Blackwell, L.J., Borowiec, J.A. and Mastrangelo, I.A. (1996) Single-stranded-DNA binding alters human replication protein A structure and facilitates interaction with DNA-dependent protein kinase. Mol. Cell. Biol., 16, 4798-4807.
    • (1996) Mol. Cell. Biol. , vol.16 , pp. 4798-4807
    • Blackwell, L.J.1    Borowiec, J.A.2    Mastrangelo, I.A.3
  • 2
    • 0031030449 scopus 로고    scopus 로고
    • Structure of the single-stranded-DNA-binding domain of replication protein A bound to DNA
    • Bochkarev, A., Pfuetzner, R.A., Edwards, A.M. and Frappier, L. (1997) Structure of the single-stranded-DNA-binding domain of replication protein A bound to DNA. Nature, 385, 176-181.
    • (1997) Nature , vol.385 , pp. 176-181
    • Bochkarev, A.1    Pfuetzner, R.A.2    Edwards, A.M.3    Frappier, L.4
  • 3
    • 0032512745 scopus 로고    scopus 로고
    • The RPA32 subunit of human replication protein A contains a single-stranded DNA-binding domain
    • Bochkareva, E., Frappier, L., Edwards, A.M. and Bochkarev, A. (1998) The RPA32 subunit of human replication protein A contains a single-stranded DNA-binding domain. J. Biol. Chem., 273, 3932-3936.
    • (1998) J. Biol. Chem. , vol.273 , pp. 3932-3936
    • Bochkareva, E.1    Frappier, L.2    Edwards, A.M.3    Bochkarev, A.4
  • 4
    • 0031753251 scopus 로고    scopus 로고
    • Identification and characterization of the fourth single-stranded-DNA binding domain of replication protein A
    • Brill, S.J. and Bastin-Shanower, S. (1998) Identification and characterization of the fourth single-stranded-DNA binding domain of replication protein A. Mol. Cell. Biol., 18, 7225-7234.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 7225-7234
    • Brill, S.J.1    Bastin-Shanower, S.2
  • 5
    • 0025950546 scopus 로고
    • Replication factor-A from Saccharomyces cerevisiae is encoded by three essential genes coordinately expressed at S phase
    • Brill, S.J. and Stillman, B. (1991) Replication factor-A from Saccharomyces cerevisiae is encoded by three essential genes coordinately expressed at S phase. Genes Dev., 5, 1589-1600.
    • (1991) Genes Dev. , vol.5 , pp. 1589-1600
    • Brill, S.J.1    Stillman, B.2
  • 7
    • 0028607553 scopus 로고
    • The DNA-activated protein kinase is required for the phosphorylation of replication protein A during Simian virus 40 DNA replication
    • Brush, G.S., Anderson, C.W. and Kelly, T.J. (1994) The DNA-activated protein kinase is required for the phosphorylation of replication protein A during simian virus 40 DNA replication. Proc. Natl Acad. Sci. USA, 91, 12520-12524.
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 12520-12524
    • Brush, G.S.1    Anderson, C.W.2    Kelly, T.J.3
  • 8
    • 0030479885 scopus 로고    scopus 로고
    • The ATM homologue MEC1 is required for phosphorylation of replication protein A in yeast
    • Brush, G.S., Morrow, D.M., Hieter, P. and Kelly, T.J. (1996) The ATM homologue MEC1 is required for phosphorylation of replication protein A in yeast. Proc. Natl Acad. Sci. USA, 93, 15075-15080.
    • (1996) Proc. Natl Acad. Sci. USA , vol.93 , pp. 15075-15080
    • Brush, G.S.1    Morrow, D.M.2    Hieter, P.3    Kelly, T.J.4
  • 9
    • 0031471204 scopus 로고    scopus 로고
    • The solution structure of the S1 RNA binding domain: A member of an ancient nucleic acid-binding fold
    • Bycroft, M., Hubbard, T.J.P., Proctor, M., Freund, S.M.V. and Murzin, A.G. (1997) The solution structure of the S1 RNA binding domain: a member of an ancient nucleic acid-binding fold. Cell. 88, 235-242.
    • (1997) Cell , vol.88 , pp. 235-242
    • Bycroft, M.1    Hubbard, T.J.P.2    Proctor, M.3    Freund, S.M.V.4    Murzin, A.G.5
  • 10
    • 0030818593 scopus 로고    scopus 로고
    • PHASES-95: A program package for processing and analyzing diffraction data from macromolecules
    • Sweet, C.C.R. (ed.), Academic Press, Orlando, FL
    • Furey, W. and Swaminathan, S. (1997) PHASES-95: A program package for processing and analyzing diffraction data from macromolecules. In Sweet, C.C.R. (ed.), Methods in Enzymology: Macromolecular Crystallography. Academic Press, Orlando, FL, Vol. 277, pp. 590-620.
    • (1997) Methods in Enzymology: Macromolecular Crystallography , vol.277 , pp. 590-620
    • Furey, W.1    Swaminathan, S.2
  • 11
    • 0028917290 scopus 로고
    • Structural analysis of human replication protein A. Mapping functional domains of the 70-kDa subunit
    • Gomes, X.V. and Wold, M.S. (1995) Structural analysis of human replication protein A. Mapping functional domains of the 70-kDa subunit. J. Biol. Chem., 270, 4534-4543.
    • (1995) J. Biol. Chem. , vol.270 , pp. 4534-4543
    • Gomes, X.V.1    Wold, M.S.2
  • 12
    • 0029798240 scopus 로고    scopus 로고
    • Functional domains of the 70-kilodalton subunit of human replication protein A
    • Gomes, X.V. and Wold, M.S. (1996) Functional domains of the 70-kilodalton subunit of human replication protein A. Biochemistry, 35, 10558-10568.
    • (1996) Biochemistry , vol.35 , pp. 10558-10568
    • Gomes, X.V.1    Wold, M.S.2
  • 13
    • 0032431057 scopus 로고    scopus 로고
    • Crystal structure of the Oxytricha nova telomere end binding protein complexed with single strand DNA
    • Horvath, M.P., Schweiker, V.L., Bevilacqua, J.M., Ruggles, J.A. and Schultz, S.C. (1998) Crystal structure of the Oxytricha nova telomere end binding protein complexed with single strand DNA. Cell, 95, 963-974.
    • (1998) Cell , vol.95 , pp. 963-974
    • Horvath, M.P.1    Schweiker, V.L.2    Bevilacqua, J.M.3    Ruggles, J.A.4    Schultz, S.C.5
  • 14
    • 84889120137 scopus 로고
    • Improved methods for building protein models in electron density maps and the location of errors in these models
    • Jones, T.A., Zou, J.Y., Cowan, S.W. and Kjeldgaard, M. (1991) Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr., A47, 110-119.
    • (1991) Acta Crystallogr. , vol.A47 , pp. 110-119
    • Jones, T.A.1    Zou, J.Y.2    Cowan, S.W.3    Kjeldgaard, M.4
  • 15
    • 0028957756 scopus 로고
    • Recombinant human replication protein A binds to polynucleotides with low cooperativity
    • Kim, C. and Wold, M.S. (1995) Recombinant human replication protein A binds to polynucleotides with low cooperativity. Biochemistry, 34, 2058-2064.
    • (1995) Biochemistry , vol.34 , pp. 2058-2064
    • Kim, C.1    Wold, M.S.2
  • 16
    • 0027939024 scopus 로고
    • Interactions of human replication protein A with oligonucleotides
    • Kim, C., Paulus, B.F. and Wold, M.S. (1994) Interactions of human replication protein A with oligonucleotides. Biochemistry, 33, 14197-14206.
    • (1994) Biochemistry , vol.33 , pp. 14197-14206
    • Kim, C.1    Paulus, B.F.2    Wold, M.S.3
  • 17
    • 0031741549 scopus 로고    scopus 로고
    • Middle subunit of replication protein A contacts growing RNA-DNA primers in replicating Simian virus 40 chromosomes
    • Lavrik, O.I., Kolpashchikov, D.M., Nasheuer, H.P., Weisshart, K. and Favre, A. (1998) Middle subunit of replication protein A contacts growing RNA-DNA primers in replicating simian virus 40 chromosomes. Mol. Cell. Biol., 18, 6399-6407.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 6399-6407
    • Lavrik, O.I.1    Kolpashchikov, D.M.2    Nasheuer, H.P.3    Weisshart, K.4    Favre, A.5
  • 18
    • 0029131609 scopus 로고
    • Human xeroderma pigmentosum group A protein interacts with human replication protein A and inhibits DNA replication
    • Lee, S.H., Kim, D.K. and Drissi, R. (1995) Human xeroderma pigmentosum group A protein interacts with human replication protein A and inhibits DNA replication. J. Biol. Chem., 270, 21800-21805.
    • (1995) J. Biol. Chem. , vol.270 , pp. 21800-21805
    • Lee, S.H.1    Kim, D.K.2    Drissi, R.3
  • 19
    • 0031741549 scopus 로고    scopus 로고
    • The middle subunit of replication protein A contacts growing RNA-DNA primers in replicating Simian virus 40 chromosomes
    • Mass, G., Nethanel, T. and Kaufmann, G. (1998) The middle subunit of replication protein A contacts growing RNA-DNA primers in replicating simian virus 40 chromosomes. Mol. Cell. Biol., 18, 6399-407.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 6399-6407
    • Mass, G.1    Nethanel, T.2    Kaufmann, G.3
  • 21
    • 0027479161 scopus 로고
    • OB (oligonucleotide/oligosaccharide)-fold: Common structural and functional solution for non-homologous sequences
    • Murzin, A.G. (1993) OB (oligonucleotide/oligosaccharide)-fold: common structural and functional solution for non-homologous sequences. EMBO J., 12, 861-867.
    • (1993) EMBO J. , vol.12 , pp. 861-867
    • Murzin, A.G.1
  • 22
    • 0030996226 scopus 로고    scopus 로고
    • A sequence in the N-terminal region of human uracil-DNA glycosylase with homology to XPA interacts with the C-terminal part of the 34-kDa subunit of replication protein A
    • Nagelhus, T.A. et al. (1997) A sequence in the N-terminal region of human uracil-DNA glycosylase with homology to XPA interacts with the C-terminal part of the 34-kDa subunit of replication protein A. J. Biol. Chem., 272, 6561-6566.
    • (1997) J. Biol. Chem. , vol.272 , pp. 6561-6566
    • Nagelhus, T.A.1
  • 23
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray diffraction data collected in oscillation mode
    • Carter, J.C.W. and Sweet, R.M. (eds), Academic Press, Orlando, FL
    • Otwinowski, Z. and Minor, W. (1997) Processing of X-ray diffraction data collected in oscillation mode. In Carter, J.C.W. and Sweet, R.M. (eds), Methods in Enzymology: Macromolecular Crystallography, Part A. Academic Press, Orlando, FL, Vol. 276, pp. 307-326.
    • (1997) Methods in Enzymology: Macromolecular Crystallography, Part A , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 24
    • 0031014993 scopus 로고    scopus 로고
    • Replication protein A. Characterization and crystallization of the DNA binding domain
    • Pfuetzner, R.A., Bochkarev, A., Frappier, L. and Edwards, A.M. (1997) Replication protein A. Characterization and crystallization of the DNA binding domain. J. Biol. Chem., 272, 430-434.
    • (1997) J. Biol. Chem. , vol.272 , pp. 430-434
    • Pfuetzner, R.A.1    Bochkarev, A.2    Frappier, L.3    Edwards, A.M.4
  • 26
    • 0026429275 scopus 로고
    • Class II aminoacyl transfer RNA synthetases: Crystal structure of yeast aspartyl-tRNA synthetase complexed with tRNA (Asp)
    • Ruff, M., Krishnaswamy, S., Boeglin, M., Poterszman, A., Mitschler, A., Podjarny, A., Rees, B., Thierry, J.C. and Moras, D. (1991) Class II aminoacyl transfer RNA synthetases: crystal structure of yeast aspartyl-tRNA synthetase complexed with tRNA (Asp). Science, 252, 1682-1689.
    • (1991) Science , vol.252 , pp. 1682-1689
    • Ruff, M.1    Krishnaswamy, S.2    Boeglin, M.3    Poterszman, A.4    Mitschler, A.5    Podjarny, A.6    Rees, B.7    Thierry, J.C.8    Moras, D.9
  • 27
    • 0032497368 scopus 로고    scopus 로고
    • The 32- and 14-kilodalton subunits of replication protein A are responsible for species-specific interactions with single-stranded DNA
    • Sibenaller, Z.A., Sorensen, B.R. and Wold, M.S. (1998) The 32- and 14-kilodalton subunits of replication protein A are responsible for species-specific interactions with single-stranded DNA. Biochemistry, 37, 12496-12506.
    • (1998) Biochemistry , vol.37 , pp. 12496-12506
    • Sibenaller, Z.A.1    Sorensen, B.R.2    Wold, M.S.3
  • 28
    • 0027439390 scopus 로고
    • Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin
    • Van Duyne, G.D., Standaert, R.F., Karplus, P.A., Schreiber, S.L. and Clardy, J. (1993) Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin. J. Mol. Biol., 229, 105-124.
    • (1993) J. Mol. Biol. , vol.229 , pp. 105-124
    • Van Duyne, G.D.1    Standaert, R.F.2    Karplus, P.A.3    Schreiber, S.L.4    Clardy, J.5
  • 29
    • 0033616816 scopus 로고    scopus 로고
    • Replication protein A interactions with DNA. 1. Functions of the DNA-binding and zinc-finger domains of the 70-kDa subunit
    • Walther, A.P., Gomes, X.V., Lao, Y., Lee, C.G. and Wold, M.S. (1999) Replication protein A interactions with DNA. 1. Functions of the DNA-binding and zinc-finger domains of the 70-kDa subunit. Biochemistry, 38, 3963-3973.
    • (1999) Biochemistry , vol.38 , pp. 3963-3973
    • Walther, A.P.1    Gomes, X.V.2    Lao, Y.3    Lee, C.G.4    Wold, M.S.5
  • 30
    • 0030908093 scopus 로고    scopus 로고
    • Replication protein A: A heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism
    • Wold, M.S. (1997) Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism. Annu. Rev. Biochem., 66, 61-92.
    • (1997) Annu. Rev. Biochem. , vol.66 , pp. 61-92
    • Wold, M.S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.