Mitochondrial genotype in vulvar carcinoma - Cuckoo in the nest

Journal of Biomedical Science

Volumn 17, Issue 1, 2010, Pages

  Klemba, Aleksandra ^a,b   Kowalewska, Magdalena ^c   Kukwa, Wojciech ^d   Tonska, Katarzyna ^a   Szybinska, Aleksandra ^e   Mossakowska, Malgorzata ^e   Scinska, Anna ^d   Golik, Paweł ^a,f   Koper, Kamil ^a   Radziszewski, Jakub ^c   Kukwa, Andrzej ^d   Czarnecka, Anna M ^a,b   Bartnik, Ewa ^a,f  

^a UNIVERSITY OF WARSAW   (Poland)

^b MILITARY INSTITUTE OF MEDICINE   (Poland)

^c INSTITUTE OF ONCOLOGY   (Poland)

^d MEDICAL UNIVERSITY OF WARSAW   (Poland)

^e INTERNATIONAL INSTITUTE OF MOLECULAR AND CELL BIOLOGY   (Poland)

^f INSTITUTE OF BIOCHEMISTRY AND BIOPHYSICS   (Poland)

Author keywords

[No Author keywords available]

Indexed keywords

MITOCHONDRIAL DNA; PRIMER DNA;

ADULT; AGED; ARTICLE; CONTROLLED STUDY; ENDOMETRIUM CANCER; FEMALE; GENE SEQUENCE; GENETIC POLYMORPHISM; GENOTYPE; GERM LINE; HAPLOTYPE; HEAD AND NECK CANCER; HUMAN; MALE; POLAND; PRIORITY JOURNAL; SEQUENCE ANALYSIS; VULVA CARCINOMA; VULVA SQUAMOUS CELL CARCINOMA; WART VIRUS; COMPARATIVE STUDY; GENETIC PREDISPOSITION; GENETICS; MIDDLE AGED; MOLECULAR GENETICS; MUTATION; NUCLEOTIDE SEQUENCE; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RISK FACTOR; VULVA TUMOR;

HUMAN PAPILLOMAVIRUS;

AGED; AGED, 80 AND OVER; BASE SEQUENCE; DNA MUTATIONAL ANALYSIS; DNA PRIMERS; DNA, MITOCHONDRIAL; FEMALE; GENETIC PREDISPOSITION TO DISEASE; HAPLOTYPES; HUMANS; MIDDLE AGED; MOLECULAR SEQUENCE DATA; MUTATION; POLAND; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RISK FACTORS; VULVAR NEOPLASMS;

EID: 77956488619     PISSN: 10217770     EISSN: 14230127     Source Type: Journal    
DOI: 10.1186/1423-0127-17-73     Document Type: Article

References (81)

1. Polish Cancer Registry. 2009 http://epid.coi.waw.pl/krn
2. A review of molecular pathological markers in vulvar carcinoma: lack of application in clinical practice. S Knopp C Trope JM Nesland R Holm, J Clin Pathol 2009 62 3 212 218 10.1136/jcp.2008.057240 19251952
3. The frequency of human papillomavirus infection in polish patients with vulvar squamous cell carcinoma. M Kowalewska MT Szkoda J Radziszewski K Ptaszynski M Bidzinski JA Siedlecki, Int J Gynecol Cancer 2009 20 3 434 437
4. Mitochondrial energetics and therapeutics. DC Wallace W Fan V Procaccio, Annu Rev Pathol 5 297 348 10.1146/annurev.pathol.4.110807.092314 20078222
5. Mitochondrial DNA and disease. S Dimauro G Davidzon, Ann Med 2005 37 3 222 232 10.1080/07853890510007368 16019721
6. Mitochondrial DNA-related disorders. M Mancuso M Filosto A Choub M Tentorio L Broglio A Padovani G Siciliano, Bioscience reports 2007 27 1-3 31 37 10.1007/s10540-007-9035-2 17484046
7. Mitochondrial DNA mutations in disease and aging. DC Wallace, Environ Mol Mutagen 2010 51 5 440 450 20544884
8. On the Origin of Cancer Cells. O Warburg, Science 1956 123 1 309 314 10.1126/science.123.3191.309 13298683
9. Mitochondrial mutations in cancer. M Brandon P Baldi DC Wallace, Oncogene 2006 25 34 4647 4662 10.1038/sj.onc.1209607 16892079
10. Mitochondrial DNA Mutations in Tumors. AM Czarnecka E Bartnik, Cellular Respiration and Carcinogenesis New York City: Humana Press, Apte SP, Sarangarajan R, 2009 1 12 full-text
11. Common mitochondrial polymorphisms as risk factor for endometrial cancer. AM Czarnecka A Klemba A Semczuk K Plak B Marzec T Krawczyk B Kofler P Golik E Bartnik, Int Arch Med 2009 2 1 33 10.1186/1755-7682-2-33 19863780
12. Mitochondrial NADH-dehydrogenase subunit 3 (ND3) polymorphism (A10398G) and sporadic breast cancer in Poland. AM Czarnecka T Krawczyk M Zdrozny J Lubinski RS Arnold W Kukwa A Scinska P Golik E Bartnik JA Petros, Breast Cancer Res Treat 2009 19266278
13. Mitochondrial DNA mutations in human neoplasia. A Czarnecka P Golik E Bartnik, J Appl Genet 2006 47 1 67 78 16424612
14. Methodology For Mitochondrial DNA Research In Oncology: Goals And Pitfalls. AM Czarnecka T Krawczyk JS Czarnecki W Kukwa A ciska A Ribbene R Lo Verde A Sunseri G Peri, ARS Medica Tomitana 2008 XIV 1(52) 48 64
15. Cancer as a "Mitochondriopathy". AM Czarnecka A Marino Gammazza V Di Felice G Zummo F Cappello, J Cancer Mol 2007 3 3 71 79
16. A mitochondrial paradigm of metabolic and degenerative diseases, aging, and cancer: a dawn for evolutionary medicine. DC Wallace, Annu Rev Genet 2005 39 359 407 10.1146/annurev.genet.39.110304.095751 16285865
17. Mitochondrial DNA mutations in cancer - from bench to bedside. AM Czarnecka W Kukwa T Krawczyk A Scinska A Kukwa F Cappello, Front Biosci 2010 15 437 460 10.2741/3629 20036829
18. ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis. K Ishikawa K Takenaga M Akimoto N Koshikawa A Yamaguchi H Imanishi K Nakada Y Honma J Hayashi, Science 2008 320 5876 661 664 10.1126/science.1156906 18388260
19. Mitochondrial DNA mutation stimulates prostate cancer growth in bone stromal environment. RS Arnold CQ Sun JC Richards G Grigoriev IM Coleman PS Nelson CL Hsieh JK Lee Z Xu A Rogatko AO Osunkoya M Zayzafoon L Chung JA Petros, Prostate 2009 69 1 1 11 10.1002/pros.20854 18850577
20. mtDNA mutations increase tumorigenicity in prostate cancer. JA Petros AK Baumann E Ruiz-Pesini MB Amin CQ Sun J Hall S Lim MM Issa WD Flanders SH Hosseini FF Marshall DC Wallace, Proc Natl Acad Sci USA 2005 102 3 719 724 10.1073/pnas.0408894102 15647368
21. Mitochondrial DNA instability and metabolic shift in human cancers. HC Lee YH Wei, Int J Mol Sci 2009 10 2 674 701 10.3390/ijms10020674 19333428
22. Mitochondrial DNA mutations in human cancer. A Chatterjee E Mambo D Sidransky, Oncogene 2006 25 34 4663 4674 10.1038/sj.onc.1209604 16892080
23. Microsatellite instability in mitochondrial genome of common female cancers. Y Wang VW Liu PC Tsang PM Chiu AN Cheung US Khoo P Nagley HY Ngan, Int J Gynecol Cancer 2006 16 Suppl 1 259 266 10.1111/j.1525-1438.2006.00412.x 16515601
24. Detection of mosaic pattern of mitochondrial DNA alterations in different populations of cells from the same endometrial tumor. Y Wang WC Xue VW Liu HY Ngan, Mitochondrion 2007 7 1-2 171 175 10.1016/j.mito.2006.11.014 17280873
25. High frequency of mitochondrial genome instability in human endometrial carcinomas. VW Liu HJ Yang Y Wang PC Tsang AN Cheung PM Chiu TY Ng LC Wong P Nagley HY Ngan, Br J Cancer 2003 89 4 697 701 10.1038/sj.bjc.6601110 12915881
26. Mitochondrial polymorphisms as risk factors for endometrial cancer in southwest China. L Xu Y Hu B Chen W Tang X Han H Yu C Xiao, Int J Gynecol Cancer 2006 16 4 1661 1667 10.1111/j.1525-1438.2006.00641.x 16884381
27. High incidence of somatic mitochondrial DNA mutations in human ovarian carcinomas. VW Liu HH Shi AN Cheung PM Chiu TW Leung P Nagley LC Wong HY Ngan, Cancer Res 2001 61 16 5998 6001 11507041
28. Limited clinical relevance of mitochondrial DNA mutation and gene expression analyses in ovarian cancer. P Bragoszewski J Kupryjanczyk E Bartnik A Rachinger J Ostrowski, BMC Cancer 2008 8 292 10.1186/1471-2407-8-292 18842121
29. Ancient mtDNA genetic variants modulate mtDNA transcription and replication. S Suissa Z Wang J Poole S Wittkopp J Feder TE Shutt DC Wallace GS Shadel D Mishmar, PLoS Genet 2009 5 5 1000474 10.1371/journal.pgen.1000474 19424428
30. Mitochondria as chi. DC Wallace, Genetics 2008 179 2 727 735 10.1534/genetics.104.91769 18558648
31. Analysis of potential cancer biomarkers in mitochondrial DNA. JP Jakupciak GD Dakubo S Maragh RL Parr, Curr Opin Mol Ther 2006 8 6 500 506 17243485
32. Mitochondrial DNA mutations in cancer - from bench to bedside. AM Czarnecka W Kukwa T Krawczyk A Scinska A Kukwa F Cappello, Front Biosci 2010 15 437 460 10.2741/3629 20036829
33. Facile detection of mitochondrial DNA mutations in tumors and bodily fluids. MS Fliss H Usadel OL Caballero L Wu MR Buta SM Eleff J Jen D Sidransky, Science 2000 287 5460 2017 2019 10.1126/science.287.5460.2017 10720328
34. Methodology For Mitochondrial DNA Research In Oncology: Goals And Pitfalls. AM Czarnecka T Krawczyk JS Czarnecki W Kukwa A ciska A Ribbene R Lo Verde A Sunseri G Peri, ARS Medica Tomitana 2008 XIV 1(52) 48 64
35. Detection of carbonic anhydrase 9-expressing tumor cells in the lymph nodes of vulvar carcinoma patients by RT-PCR. M Kowalewska J Radziszewski J Kulik M Barathova A Nasierowska-Guttmajer M Bidzinski J Pastorek S Pastorekova JA Siedlecki, Int J Cancer 2005 116 6 957 962 10.1002/ijc.21106 15856466
36. The frequency of human papillomavirus infection in Polish patients with vulvar squamous carcinoma. M Kowalewska MT Szkoda J Radziszewski K Ptaszynski M Bidzinski JA Siedlecki, Int J Gynecol Cancer 2010 20 434 437 20375810
37. Polish Centenarians Programme. Multidisciplinary studies of successful ageing: aims, methods, and preliminary results. M Mossakowska M Barcikowska K Broczek T Grodzicki A Klich-Raczka M Kupisz-Urbanska T Podsiadly-Marczykowska E Sikora A Szybinska K Wieczorowska-Tobis J Zyczkowska J Kuznicki, Exp Gerontol 2008 43 3 238 244 10.1016/j.exger.2007.10.014 18082988
38. Comparison between the Polish population and European populations on the basis of mitochondrial morphs and haplogroups. J Piechota K Tonska M Nowak D Kabzinska A Lorenc E Bartnik, Acta Biochim Pol 2004 51 4 883 895 15625560
39. Mitochondrial DNA variability in Poles and Russians. BA Malyarchuk T Grzybowski MV Derenko J Czarny M Wozniak D Miscicka-Sliwka, Annals of human genetics 2002 66 Pt 4 261 283 10.1046/j.1469-1809.2002.00116.x 12418968
40. Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA. RM Andrews I Kubacka PF Chinnery RN Lightowlers DM Turnbull N Howell, Nat Genet 1999 23 2 147 10.1038/13779 10508508
41. An enhanced MITOMAP with a global mtDNA mutational phylogeny. E Ruiz-Pesini MT Lott V Procaccio JC Poole MC Brandon D Mishmar C Yi J Kreuziger P Baldi DC Wallace, Nucleic Acids Res 2007 35 Database 823 828 10.1093/nar/gkl927 17178747
42. mtDB: Human Mitochondrial Genome Database, a resource for population genetics and medical sciences. M Ingman U Gyllensten, Nucleic Acids Res 2006 34 Database 749 751 10.1093/nar/gkj010 16381973
43. Mitochondrial Genotype and Breast Cancer Predisposition. AM Czarnecka T Krawczyk K Plak A Klemba M Zdrozny RS Arnold B Kofler P Golik A Szybinska J Lubinski, et al. Oncol Rep 2010 20043118
44. Classification of European mtDNAs from an analysis of three European populations. A Torroni K Huoponen P Francalacci M Petrozzi L Morelli R Scozzari D Obinu ML Savontaus DC Wallace, Genetics 1996 144 4 1835 1850 8978068
45. Reduced-median-network analysis of complete mitochondrial DNA coding-region sequences for the major African, Asian, and European haplogroups. C Herrnstadt JL Elson E Fahy G Preston DM Turnbull C Anderson SS Ghosh JM Olefsky MF Beal RE Davis N Howell, Am J Hum Genet 2002 70 5 1152 1171 10.1086/339933 11938495
46. Detecting errors in mtDNA data by phylogenetic analysis. HJ Bandelt P Lahermo M Richards V Macaulay, International journal of legal medicine 2001 115 2 64 69 10.1007/s004140100228 11724431
47. Handbook of parametric and nonparametric statistical procedures. DJ Sheskin, Boca Raton, FL: Chapman & Hall 4 2007
48. Chi-squared and Fisher-Irwin tests of two-by-two tables with small sample recommendations. I Campbell, Stat Med 2007 26 19 3661 3675 10.1002/sim.2832 17315184
49. Statistical Methods for Rates & Proportions. JL Fleiss B Levin M Cho Paik J Fleiss, San Francisco, CA: Wiley-Interscience Inc 3 2003
50. Fundamentals of Biostatistics. B Rosner, Florence, KY: Duxbury Press 6 2005
51. Diversity of mitochondrial DNA lineages in South Siberia. MV Derenko T Grzybowski BA Malyarchuk IK Dambueva GA Denisova J Czarny CM Dorzhu VT Kakpakov D Micicka-Sliwka M Woniak IA Zakharov, Annals of human genetics 2003 67 Pt 5 391 411 10.1046/j.1469-1809.2003.00035.x 12940914
52. Phylogenetic network for European mtDNA. S Finnila MS Lehtonen K Majamaa, Am J Hum Genet 2001 68 6 1475 1484 10.1086/320591 11349229
53. Common mitochondrial polymorphisms as risk factor for endometrial cancer. A Czarnecka A Klemba A Semczuk K Plak B Marzec T Krawczyk B Kofler P Golik E Bartnik, 2009
54. A mitochondrial paradigm of metabolic and degenerative diseases, aging, and cancer: a dawn for evolutionary medicine. DC Wallace, Annu Rev Genet 2005 39 359 407 10.1146/annurev.genet.39.110304.095751 16285865
55. Mitochondrial chaperones in cancer: from molecular biology to clinical diagnostics. AM Czarnecka C Campanella G Zummo F Cappello, Cancer Biol Ther 2006 5 7 714 720 16861898
56. Mitochondrial chaperones in cancer: from molecular biology to clinical diagnostics. AM Czarnecka C Campanella G Zummo F Cappello, Cancer Biol Ther 2006 5 7 714 720 16861898
57. North American white mitochondrial haplogroups in prostate and renal cancer. LM Booker GM Habermacher BC Jessie QC Sun AK Baumann M Amin SD Lim C Fernandez-Golarz RH Lyles MD Brown FF Marshall JA Petros, The Journal of urology 2006 175 2 468 472 discussion 472-463 10.1016/S0022-5347(05)00163-1 16406974
58. Mitochondrial genetic background modifies breast cancer risk. RK Bai SM Leal D Covarrubias A Liu LJ Wong, Cancer Res 2007 67 10 4687 4694 10.1158/0008-5472.CAN-06-3554 17510395
59. Mitochondrial variants in schizophrenia, bipolar disorder, and major depressive disorder. B Rollins MV Martin PA Sequeira EA Moon LZ Morgan SJ Watson A Schatzberg H Akil RM Myers EG Jones DC Wallace WE Bunney MP Vawter, PloS one 2009 4 3 4913 10.1371/journal.pone.0004913 19290059
60. Mitochondrial DNA haplogroups and subhaplogroups are associated with Parkinson's disease risk in a Polish PD cohort. K Gaweda-Walerych A Maruszak K Safranow M Bialecka G Klodowska-Duda K Czyzewski J Slawek M Rudzinska M Styczynska G Opala M Drozdzik JA Canter M Barcikowska C Zekanowski, J Neural Transm 2008 115 11 1521 1526 10.1007/s00702-008-0121-9 18810306
61. A practical guide to mitochondrial DNA error prevention in clinical, forensic, and population genetics. A Salas A Carracedo V Macaulay M Richards HJ Bandelt, Biochem Biophys Res Commun 2005 335 3 891 899 10.1016/j.bbrc.2005.07. 161 16102729
62. Conserved sequence box II directs transcription termination and primer formation in mitochondria. XH Pham G Farge Y Shi M Gaspari CM Gustafsson M Falkenberg, J Biol Chem 2006 281 34 24647 24652 10.1074/jbc.M602429200 16790426
63. MITOMAP: A human Mitochondrial Genome Database. http://www.mitomap.org
64. Association of mitochondrial DNA displacement loop (CA)n dinucleotide repeat polymorphism with breast cancer risk and survival among Chinese women. C Ye YT Gao W Wen JP Breyer XO Shu JR Smith W Zheng Q Cai, Cancer Epidemiol Biomarkers Prev 2008 17 8 2117 2122 10.1158/1055-9965.EPI-07-2798 18708405
65. Replication and transcription of mammalian mitochondrial DNA. P Fernandez-Silva JA Enriquez J Montoya, Exp Physiol 2003 88 1 41 56 10.1113/eph8802514 12525854
66. Mitochondrial DNA variant 16189T > C is associated with susceptibility to endometrial cancer. VW Liu Y Wang HJ Yang PC Tsang TY Ng LC Wong P Nagley HY Ngan, Hum Mutat 2003 22 2 173 174 10.1002/humu.10244 12872259
67. Mitochondrial DNA somatic mutations (point mutations and large deletions) and mitochondrial DNA variants in human thyroid pathology: a study with emphasis on Hurthle cell tumors. V Maximo P Soares J Lima J Cameselle-Teijeiro M Sobrinho-Simoes, Am J Pathol 2002 160 5 1857 1865 12000737
68. Alzheimer's brains harbor somatic mtDNA control-region mutations that suppress mitochondrial transcription and replication. PE Coskun MF Beal DC Wallace, Proc Natl Acad Sci USA 2004 101 29 10726 10731 10.1073/pnas.0403649101 15247418
69. G Brborowicz, Poonictwo i ginekologia Warszawa 2008
70. Polymorphisms, but lack of mutations or instability, in the promotor region of the mitochondrial genome in human colonic tumors. BG Heerdt J Chen LR Stewart LH Augenlicht, Cancer research 1994 54 14 3912 3915 8033115
71. Increased risk of oral cancer in relation to common Indian mitochondrial polymorphisms and Autosomal GSTP1 locus. S Datta M Majumder NK Biswas N Sikdar B Roy, Cancer 2007 110 9 1991 1999 10.1002/cncr.23016 17886251
72. Identification of somatic and germline mitochondrial DNA sequence variants in prostate cancer patients. M Gomez-Zaera J Abril L Gonzalez F Aguilo E Condom M Nadal V Nunes, Mutat Res 2006 595 1-2 42 51 16472830
73. Mitochondrial mutations in cancer. M Brandon P Baldi DC Wallace, Oncogene 2006 25 34 4647 4662 10.1038/sj.onc.1209607 16892079
74. Mosaics of ancient mitochondrial DNA: positive indicators of nonauthenticity. HJ Bandelt, Eur J Hum Genet 2005 13 10 1106 1112 10.1038/sj.ejhg.5201476 16077732
75. Low "penetrance" of phylogenetic knowledge in mitochondrial disease studies. HJ Bandelt A Achilli QP Kong A Salas S Lutz-Bonengel C Sun YP Zhang A Torroni YG Yao, Biochem Biophys Res Commun 2005 333 1 122 130 10.1016/j.bbrc.2005.04.055 15958208
76. The fingerprint of phantom mutations in mitochondrial DNA data. HJ Bandelt L Quintana-Murci A Salas V Macaulay, Am J Hum Genet 2002 71 5 1150 1160 10.1086/344397 12384858
77. Median network analysis of defectively sequenced entire mitochondrial genomes from early and contemporary disease studies. HJ Bandelt YG Yao CM Bravi A Salas T Kivisild, J Hum Genet 2009 54 3 174 181 10.1038/jhg.2009.9 19322152
78. A critical reassessment of the role of mitochondria in tumorigenesis. A Salas YG Yao V Macaulay A Vega A Carracedo HJ Bandelt, PLoS Med 2005 2 11 296 10.1371/journal.pmed.0020296 16187796
79. Mutations in the mitochondrial DNA D-loop region are frequent in cervical cancer. H Sharma A Singh C Sharma SK Jain N Singh, Cancer cell international 2005 5 34 10.1186/1475-2867-5-34 16359547
80. Mitochondrial DNA haplogroups influence AIDS progression. SL Hendrickson HB Hutcheson E Ruiz-Pesini JC Poole J Lautenberger E Sezgin L Kingsley JJ Goedert D Vlahov S Donfield DC Wallace SJ O'Brien, AIDS 2008 22 18 2429 2439 10.1097/QAD.0b013e32831940bb 19005266
81. Mitochondrial DNA G10398A polymorphism and invasive breast cancer in African-American women. JA Canter AR Kallianpur FF Parl RC Millikan, Cancer research 2005 65 17 8028 8033 16140977