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Volumn 31, Issue 5, 2010, Pages 714-721

Real-time quantification of Xeroderma pigmentosum mRNA from the mammalian cochlea

Author keywords

[No Author keywords available]

Indexed keywords

CARRIER PROTEIN; DNA BINDING PROTEIN; MESSENGER RNA; XPA PROTEIN, RAT; XPC PROTEIN, RAT;

EID: 77956423644     PISSN: 01960202     EISSN: None     Source Type: Journal    
DOI: 10.1097/AUD.0b013e3181ddf5a3     Document Type: Article
Times cited : (12)

References (47)
  • 1
    • 0034732890 scopus 로고    scopus 로고
    • Genomic heterogeneity of nucleotide excision repair
    • Balajee, A., & Bohr, V. (2000). Genomic heterogeneity of nucleotide excision repair. Gene, 250, 15-30.
    • (2000) Gene , vol.250 , pp. 15-30
    • Balajee, A.1    Bohr, V.2
  • 2
    • 8544273753 scopus 로고    scopus 로고
    • NOX3, a superoxidegenerating NADPH oxidase of the inner ear
    • Bánfi, B., Malgrange, B., Knisz, J., et al. (2004). NOX3, a superoxidegenerating NADPH oxidase of the inner ear. J Biol Chem, 279, 46065-46072.
    • (2004) J Biol Chem , vol.279 , pp. 46065-46072
    • Bánfi, B.1    Malgrange, B.2    Knisz, J.3
  • 3
    • 33846794822 scopus 로고    scopus 로고
    • The NOX family of ROS-generating NADPH oxidases: Physiology and pathophysiology
    • Bedard, K., & Krause, K. H. (2007). The NOX family of ROS-generating NADPH oxidases: Physiology and pathophysiology. Physiol Rev, 87, 245-313.
    • (2007) Physiol Rev , vol.87 , pp. 245-313
    • Bedard, K.1    Krause, K.H.2
  • 4
    • 0347360214 scopus 로고    scopus 로고
    • Induction and repair of radiation-induced DNA double-strand breaks in human fibroblasts are not affected by terminal differentiation
    • Brammer, I., Herskind, C., Haase, O., et al. (2004). Induction and repair of radiation-induced DNA double-strand breaks in human fibroblasts are not affected by terminal differentiation. DNA Repair (Amst), 3, 113-120.
    • (2004) DNA Repair (Amst) , vol.3 , pp. 113-120
    • Brammer, I.1    Herskind, C.2    Haase, O.3
  • 5
    • 34247148895 scopus 로고    scopus 로고
    • The case for 8,5̈-cyclopurine-2̈-deoxynucleosides as endogenous DNA lesions that cause neurodegeneration in xeroderma pigmentosum
    • Brooks, P. J. (2007). The case for 8,5̈-cyclopurine-2̈- deoxynucleosides as endogenous DNA lesions that cause neurodegeneration in xeroderma pigmentosum. Neuroscience, 145, 1407-1417.
    • (2007) Neuroscience , vol.145 , pp. 1407-1417
    • Brooks, P.J.1
  • 6
    • 0034698033 scopus 로고    scopus 로고
    • The oxidative DNA lesion 8,5̈-(S)-cyclo-2̈-deoxyadenosine is repaired by the nucleotide excision repair pathway and blocks gene expression in mammalian cells
    • Brooks, P. J., Wise, D. S., Berry, D. A. (2000). The oxidative DNA lesion 8,5̈-(S)-cyclo-2̈-deoxyadenosine is repaired by the nucleotide excision repair pathway and blocks gene expression in mammalian cells. J Bio Chem, 275, 22355-22362.
    • (2000) J Bio Chem , vol.275 , pp. 22355-22362
    • Brooks, P.J.1    Wise, D.S.2    Berry, D.A.3
  • 7
    • 0035490921 scopus 로고    scopus 로고
    • Temporal bone histopathology after treatment by a large amount of cisplatin: A case study
    • Cheng, P. W., Kaga, K., Koyama, S. (2001). Temporal bone histopathology after treatment by a large amount of cisplatin: A case study. Otolaryngol Head Neck Surg, 125, 411-413.
    • (2001) Otolaryngol Head Neck Surg , vol.125 , pp. 411-413
    • Cheng, P.W.1    Kaga, K.2    Koyama, S.3
  • 9
    • 0027716121 scopus 로고
    • Glutathione Stransferases in the organ of Corti of the rat: Enzymatic activity, subunit composition and immunohistochemical localization
    • el Barbary, A., Altschuler, R. A., Schacht, J. (1993). Glutathione Stransferases in the organ of Corti of the rat: Enzymatic activity, subunit composition and immunohistochemical localization. Hear Res, 71, 80-90.
    • (1993) Hear Res , vol.71 , pp. 80-90
    • El Barbary, A.1    Altschuler, R.A.2    Schacht, J.3
  • 10
    • 0030732132 scopus 로고    scopus 로고
    • Mechanism of open complex and dual incision formation by human nucleotide excision repair factors
    • Evans, E., Moggs, J. G., Hwang, J. R. (1997). Mechanism of open complex and dual incision formation by human nucleotide excision repair factors. EMBO J, 16, 6559-6573.
    • (1997) EMBO J , vol.16 , pp. 6559-6573
    • Evans, E.1    Moggs, J.G.2    Hwang, J.R.3
  • 11
    • 36448938351 scopus 로고    scopus 로고
    • The anticancer drug cisplatin induces an intrinsic apoptotic pathway inside the inner ear
    • García-Berroca, l, J. R., Nevado, J., Ramírez-Camacho, R., et al. (2007). The anticancer drug cisplatin induces an intrinsic apoptotic pathway inside the inner ear. Br J Pharmacol, 152, 1012-1020.
    • (2007) Br J Pharmacol , vol.152 , pp. 1012-1020
    • García-Berroca, L.J.R.1    Nevado, J.2    Ramírez-Camacho, R.3
  • 12
    • 0037338582 scopus 로고    scopus 로고
    • Nucleotide excision repair in rat tissues
    • Gospodinov, A., Ivanov, R., Anachova, B. (2003). Nucleotide excision repair in rat tissues: Eur J Biochem, 270, 1000-1005.
    • (2003) Eur J Biochem , vol.270 , pp. 1000-1005
    • Gospodinov, A.1    Ivanov, R.2    Anachova, B.3
  • 13
    • 46449091667 scopus 로고    scopus 로고
    • Aminoglycoside induced ototoxicity
    • Guthrie, O. W. (2008a). Aminoglycoside induced ototoxicity. Toxicology, 249, 91-96.
    • (2008) Toxicology , vol.249 , pp. 91-96
    • Guthrie, O.W.1
  • 14
    • 55749101018 scopus 로고    scopus 로고
    • Dys-synchronous regulation of XPC and XPA among trigeminal ganglion neurons following cisplatin treatment cycles
    • Guthrie, O. W. (2008b). Dys-synchronous regulation of XPC and XPA among trigeminal ganglion neurons following cisplatin treatment cycles. Anticancer Res, 28, 2637-2640.
    • (2008) Anticancer Res , vol.28 , pp. 2637-2640
    • Guthrie, O.W.1
  • 15
    • 56349124691 scopus 로고    scopus 로고
    • Preincision complex-I from the excision nuclease reaction among cochlear spiral limbus and outer hair cells
    • Guthrie, O. W. (2008c). Preincision complex-I from the excision nuclease reaction among cochlear spiral limbus and outer hair cells. J Mol Histol, 39, 617-625.
    • (2008) J Mol Histol , vol.39 , pp. 617-625
    • Guthrie, O.W.1
  • 16
    • 63049124731 scopus 로고    scopus 로고
    • DNA repair proteins and telomerase reverse transcriptase in the cochlear lateral wall of cisplatin treated rats
    • Guthrie, O. W. (2009). DNA repair proteins and telomerase reverse transcriptase in the cochlear lateral wall of cisplatin treated rats. J Chemother, 21, 74-79.
    • (2009) J Chemother , vol.21 , pp. 74-79
    • Guthrie, O.W.1
  • 17
    • 43049097827 scopus 로고    scopus 로고
    • Cisplatin induces cytoplasmic to nuclear translocation of nucleotide excision repair factors among spiral ganglion neurons
    • Guthrie, O. W., Li-Korotki, H.-S., Durrant, J. D., et al. (2008). Cisplatin induces cytoplasmic to nuclear translocation of nucleotide excision repair factors among spiral ganglion neurons. Hear Res, 239, 79-91.
    • (2008) Hear Res , vol.239 , pp. 79-91
    • Guthrie, O.W.1    Li-Korotki, H.-S.2    Durrant, J.D.3
  • 18
    • 0031802125 scopus 로고    scopus 로고
    • Histopathology of human temporal bone after cis-platinum, radiation, or both
    • Hoistad, D. L., Ondrey, F. G., Mutlu, C. (1998). Histopathology of human temporal bone after cis-platinum, radiation, or both. Otolaryngol Head Neck Surg, 118, 825-832.
    • (1998) Otolaryngol Head Neck Surg , vol.118 , pp. 825-832
    • Hoistad, D.L.1    Ondrey, F.G.2    Mutlu, C.3
  • 19
    • 34250682202 scopus 로고    scopus 로고
    • Deficient base excision repair of oxidative DNA damage induced by methylene blue plus visible light in xeroderma pigmentosum group C fibroblasts
    • Kassam, S. N., & Rainbow, A. J. (2007). Deficient base excision repair of oxidative DNA damage induced by methylene blue plus visible light in xeroderma pigmentosum group C fibroblasts. Biochem Biophys Res Commun, 359, 1004-1009.
    • (2007) Biochem Biophys Res Commun , vol.359 , pp. 1004-1009
    • Kassam, S.N.1    Rainbow, A.J.2
  • 20
    • 0021796970 scopus 로고
    • Neuro-otological abnormalities in xeroderma pigmentosum with particular reference to deafness
    • Kenyon, G. S., Booth, J. B., Prasher, D. K. (1985). Neuro-otological abnormalities in xeroderma pigmentosum with particular reference to deafness. Brain, 108, 771-784.
    • (1985) Brain , vol.108 , pp. 771-784
    • Kenyon, G.S.1    Booth, J.B.2    Prasher, D.K.3
  • 21
    • 0032787487 scopus 로고    scopus 로고
    • A radical demise: Toxins and trauma share common pathways in hair cell death
    • Kopke, R., Allen, K. A., Henderson, D. (1999). A radical demise: Toxins and trauma share common pathways in hair cell death. Anal N Y Acad Sci, 884, 171-191.
    • (1999) Anal N y Acad Sci , vol.884 , pp. 171-191
    • Kopke, R.1    Allen, K.A.2    Henderson, D.3
  • 22
    • 0034636004 scopus 로고    scopus 로고
    • Removal of oxygen free-radical-induced 5̈8-purine cyclodeoxynucleoside from DNA by the nucleotide excision-repair pathway in human cells
    • Kuraoka, I., Bender, C., Romieu, A., et al. (2000). Removal of oxygen free-radical-induced 5̈8-purine cyclodeoxynucleoside from DNA by the nucleotide excision-repair pathway in human cells. PNAS, 97, 3832-3837.
    • (2000) PNAS , vol.97 , pp. 3832-3837
    • Kuraoka, I.1    Bender, C.2    Romieu, A.3
  • 23
    • 0031454457 scopus 로고    scopus 로고
    • Glutathionedependent antioxidant systems in the mammalian inner ear: Effects of aging, ototoxic drugs and noise
    • Lautermann, J., Crann, S. A., McLaren, J., et al. (1997). Glutathionedependent antioxidant systems in the mammalian inner ear: Effects of aging, ototoxic drugs and noise. Hear Res, 114, 75-82.
    • (1997) Hear Res , vol.114 , pp. 75-82
    • Lautermann, J.1    Crann, S.A.2    McLaren, J.3
  • 24
    • 0035176067 scopus 로고    scopus 로고
    • The xeroderma pigmentosum group D (XPD) gene: One gene, two functions three diseases
    • Lehmann, A. L. (2001). The xeroderma pigmentosum group D (XPD) gene: One gene, two functions three diseases. Genes Develop, 15, 15-23.
    • (2001) Genes Develop , vol.15 , pp. 15-23
    • Lehmann, A.L.1
  • 25
    • 8644219594 scopus 로고    scopus 로고
    • In vivo dynamics of chromatin-associated complex formation in mammalian nucleotide excision repair
    • Moné, M. J., Bernas, T., Dinant, C., et al. (2004). In vivo dynamics of chromatin-associated complex formation in mammalian nucleotide excision repair. PNAS, 101, 15933-15937.
    • (2004) PNAS , vol.101 , pp. 15933-15937
    • Moné, M.J.1    Bernas, T.2    Dinant, C.3
  • 26
    • 33750922149 scopus 로고    scopus 로고
    • Phenotypic heterogeneity in the XPB DNA helicase gene (ERCC3): Xeroderma pigmentosum without and with Cockayne syndrome
    • Oh, K. S., Khan, S. G., Jaspers, N. G. (2006). Phenotypic heterogeneity in the XPB DNA helicase gene (ERCC3): Xeroderma pigmentosum without and with Cockayne syndrome. Hum Mutat, 27, 1092-1103
    • (2006) Hum Mutat , vol.27 , pp. 1092-1103
    • Oh, K.S.1    Khan, S.G.2    Jaspers, N.G.3
  • 27
    • 24044449257 scopus 로고    scopus 로고
    • Mathematical modeling of nucleotide excision repair reveals efficiency of sequential assembly strategies
    • Politi, A., Moné, M. J., Houtsmuller, A. B., et al. (2005). Mathematical modeling of nucleotide excision repair reveals efficiency of sequential assembly strategies. Mol Cell, 19, 679-690.
    • (2005) Mol Cell , vol.19 , pp. 679-690
    • Politi, A.1    Moné, M.J.2    Houtsmuller, A.B.3
  • 28
    • 0042632884 scopus 로고    scopus 로고
    • Xeroderma pigmentosum group A protein loads as a separate factor onto DNA lesions
    • Rademakers, S., Volker, M., Hoogstraten, D., et al. (2003). Xeroderma pigmentosum group A protein loads as a separate factor onto DNA lesions. Mol Cell Biol, 23, 5755-5767.
    • (2003) Mol Cell Biol , vol.23 , pp. 5755-5767
    • Rademakers, S.1    Volker, M.2    Hoogstraten, D.3
  • 29
    • 0034727603 scopus 로고    scopus 로고
    • Cockayne syndrome and xeroderma pigmentosum: DNA repair disorders with overlaps and paradoxes
    • Rapin, I., Lindenbaum, Y., Dickson, D. W., et al. (2000). Cockayne syndrome and xeroderma pigmentosum: DNA repair disorders with overlaps and paradoxes. Neurology, 55, 1442-1449.
    • (2000) Neurology , vol.55 , pp. 1442-1449
    • Rapin, I.1    Lindenbaum, Y.2    Dickson, D.W.3
  • 30
    • 0030745912 scopus 로고    scopus 로고
    • In vitro repair of oxidative DNA damage by human nucleotide excision repair system: Possible explanation for neurodegeneration in xeroderma pigmentosum patients
    • Reardon, J. T., Bessho, T., Kung. H. C., et al. (1997). In vitro repair of oxidative DNA damage by human nucleotide excision repair system: Possible explanation for neurodegeneration in xeroderma pigmentosum patients. Proc Natl Acad Sci U S A, 95, 9463-9468.
    • (1997) Proc Natl Acad Sci U S A , vol.95 , pp. 9463-9468
    • Reardon, J.T.1    Bessho, T.2    Kung, H.C.3
  • 31
    • 0141753120 scopus 로고    scopus 로고
    • The comings and goings of nucleotide excision repair factors on damaged DNA
    • Riedl, T., Hanaoka, F., Egly, J. M. (2003). The comings and goings of nucleotide excision repair factors on damaged DNA. EMBO J, 22, 5293-5303.
    • (2003) EMBO J , vol.22 , pp. 5293-5303
    • Riedl, T.1    Hanaoka, F.2    Egly, J.M.3
  • 32
    • 0025820574 scopus 로고
    • Neurologic disease in xeroderma pigmentosum: Documentation of a late onset type of the juvenile onset form
    • Robbins, H., Brumback, R. A., Mendiones, M., et al. (1991). Neurologic disease in xeroderma pigmentosum: Documentation of a late onset type of the juvenile onset form. Brain, 114, 1335-1361.
    • (1991) Brain , vol.114 , pp. 1335-1361
    • Robbins, H.1    Brumback, R.A.2    Mendiones, M.3
  • 33
    • 33947212468 scopus 로고    scopus 로고
    • Mechanisms of cisplatin-induced ototoxicity and prevention
    • Rybak, L. P., Whitworth, C. A., Mukherjea, D., et al. (2007). Mechanisms of cisplatin-induced ototoxicity and prevention. Hear Res, 226, 157-167.
    • (2007) Hear Res , vol.226 , pp. 157-167
    • Rybak, L.P.1    Whitworth, C.A.2    Mukherjea, D.3
  • 34
    • 44949231424 scopus 로고    scopus 로고
    • Analyzing real-time PCR data by the comparative C(T) method
    • Schmittgen, T. D., & Livak, K. J. (2008). Analyzing real-time PCR data by the comparative C(T) method. Nat Protoc, 3, 1101-1108.
    • (2008) Nat Protoc , vol.3 , pp. 1101-1108
    • Schmittgen, T.D.1    Livak, K.J.2
  • 35
    • 0034668118 scopus 로고    scopus 로고
    • Quantitative reverse transcription-polymerase chain reaction to study mRNA decay: Comparison of endpoint and real-time methods
    • Schmittgen, T. D., Zakrajsek, B. A., Mills, A. G. (2000). Quantitative reverse transcription-polymerase chain reaction to study mRNA decay: Comparison of endpoint and real-time methods. Anal Biochem, 285, 194-204.
    • (2000) Anal Biochem , vol.285 , pp. 194-204
    • Schmittgen, T.D.1    Zakrajsek, B.A.2    Mills, A.G.3
  • 36
    • 0030606304 scopus 로고    scopus 로고
    • Enhanced XPA mRNA levels in cisplatin-resistant human ovarian cancer are not associated with XPA mutations or gene amplifications
    • States, J. C., & Reed, E. (1996). Enhanced XPA mRNA levels in cisplatin-resistant human ovarian cancer are not associated with XPA mutations or gene amplifications. Cancer Lett, 108, 233-237.
    • (1996) Cancer Lett , vol.108 , pp. 233-237
    • States, J.C.1    Reed, E.2
  • 37
    • 0032134423 scopus 로고    scopus 로고
    • Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair
    • Sugasawa, K., Ng, J. M., Masutani, C., et al. (1998). Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair. Mol Cell, 2, 223-232.
    • (1998) Mol Cell , vol.2 , pp. 223-232
    • Sugasawa, K.1    Ng, J.M.2    Masutani, C.3
  • 38
    • 41049094372 scopus 로고    scopus 로고
    • Xeroderma pigmentosum genes: Functions inside and outside DNA repair
    • Sugasawa, K. (2008). Xeroderma pigmentosum genes: Functions inside and outside DNA repair. Carcinogenesis, 29, 455-465.
    • (2008) Carcinogenesis , vol.29 , pp. 455-465
    • Sugasawa, K.1
  • 39
    • 0035019862 scopus 로고    scopus 로고
    • Direct evidence of nitric oxide production in the guinea pig organ of Corti
    • Takumida, M., & Anniko, M. (2001). Direct evidence of nitric oxide production in the guinea pig organ of Corti. Acta Otolaryngol, 121, 342-345.
    • (2001) Acta Otolaryngol , vol.121 , pp. 342-345
    • Takumida, M.1    Anniko, M.2
  • 40
    • 0141567801 scopus 로고    scopus 로고
    • Critical DNA damage recognition functions of XPC-hHR23b and XPA-RPA in nucleotide excision repair
    • Thoma, B. S., & Vasquez, K. M. (2003). Critical DNA damage recognition functions of XPC-hHR23b and XPA-RPA in nucleotide excision repair. Mol Carcinogen, 38, 1-13.
    • (2003) Mol Carcinogen , vol.38 , pp. 1-13
    • Thoma, B.S.1    Vasquez, K.M.2
  • 41
    • 33745278586 scopus 로고    scopus 로고
    • High accumulation of platinum-DNA adducts in strial marginal cells of the cochlea is an early event in cisplatin but not carboplatin ototoxicity
    • Thomas, J. P., Lautermann, J., Liedert, B., et al. (2006). High accumulation of platinum-DNA adducts in strial marginal cells of the cochlea is an early event in cisplatin but not carboplatin ototoxicity. Mol Pharmacol, 70, 23-29.
    • (2006) Mol Pharmacol , vol.70 , pp. 23-29
    • Thomas, J.P.1    Lautermann, J.2    Liedert, B.3
  • 42
    • 34250630832 scopus 로고    scopus 로고
    • Determination of hair cell metabolic state in isolated cochlear preparations by twophoton microscopy
    • Tiede, L. M., Rocha-Sanchez, S. M., Hallworth, R. (2007). Determination of hair cell metabolic state in isolated cochlear preparations by twophoton microscopy. J Biomed Opt, 12, 1-15.
    • (2007) J Biomed Opt , vol.12 , pp. 1-15
    • Tiede, L.M.1    Rocha-Sanchez, S.M.2    Hallworth, R.3
  • 43
    • 33746007179 scopus 로고    scopus 로고
    • Future opportunities in preventing cisplatin induced ototoxicity
    • van den Berg, J. H., Beijnen, J. H., Balm, A. J. (2006). Future opportunities in preventing cisplatin induced ototoxicity. Cancer Treat Rev, 32, 390-397.
    • (2006) Cancer Treat Rev , vol.32 , pp. 390-397
    • Van Den Berg, J.H.1    Beijnen, J.H.2    Balm, A.J.3
  • 44
    • 18044362704 scopus 로고    scopus 로고
    • Immunohistochemical detection of platinated DNA in the cochlea of cisplatin-treated guinea pigs
    • van Ruijven, M. W. M., de Groot, J. C. M. J., Hendriksen, F. (2005). Immunohistochemical detection of platinated DNA in the cochlea of cisplatin-treated guinea pigs. Hear Res, 203, 112-121.
    • (2005) Hear Res , vol.203 , pp. 112-121
    • Van Ruijven, M.W.M.1    De Groot, J.C.M.J.2    Hendriksen, F.3
  • 45
    • 26844514889 scopus 로고    scopus 로고
    • ABCC5, ERCC2, XPA and XRCC1 transcript abundance levels correlate with cisplatin chemoresistance in non-small cell lung cancer cell lines
    • Weaver, D. A., Crawford, E. L., Warner, K. A., et al. (2005). ABCC5, ERCC2, XPA and XRCC1 transcript abundance levels correlate with cisplatin chemoresistance in non-small cell lung cancer cell lines. Mol Cancer, 4, 18-26.
    • (2005) Mol Cancer , vol.4 , pp. 18-26
    • Weaver, D.A.1    Crawford, E.L.2    Warner, K.A.3
  • 46
    • 0040435451 scopus 로고    scopus 로고
    • TFIIH with inactive XPD helicase functions in transcription initiation but is defective in DNA repair
    • Winkler, G. S., Araújo, S. J., Fiedler, U., et al. (2000). TFIIH with inactive XPD helicase functions in transcription initiation but is defective in DNA repair. J Biol Chem, 275, 4258-4266.
    • (2000) J Biol Chem , vol.275 , pp. 4258-4266
    • Winkler, G.S.1    Araújo, S.J.2    Fiedler, U.3
  • 47
    • 33846849467 scopus 로고    scopus 로고
    • ATR-dependent checkpoint modulates XPA nuclear import in response to UV irradiation
    • Wu, X., Shell, S. M., Liu, Y., et al. (2007). ATR-dependent checkpoint modulates XPA nuclear import in response to UV irradiation. Oncogene, 26, 757-764.
    • (2007) Oncogene , vol.26 , pp. 757-764
    • Wu, X.1    Shell, S.M.2    Liu, Y.3


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