메뉴 건너뛰기




Volumn 22, Issue 19, 2003, Pages 5293-5303

The comings and goings of nucleotide excision repair factors on damaged DNA

Author keywords

DNA resynthesis; Dual incision; NER; Recycling

Indexed keywords

DNA; DNA BINDING PROTEIN;

EID: 0141753120     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/cdg489     Document Type: Article
Times cited : (355)

References (49)
  • 1
    • 0028948394 scopus 로고
    • Mammalian DNA nucleotide excision repair reconstituted with purified components
    • Aboussekhra, A. et al. (1995) Mammalian DNA nucleotide excision repair reconstituted with purified components. Cell, 80, 859-868.
    • (1995) Cell , vol.80 , pp. 859-868
    • Aboussekhra, A.1
  • 2
    • 0242605710 scopus 로고    scopus 로고
    • Nucleotide excision repair of DNA with recombinant human proteins: Definition of the minimal set of factors, active forms of TFIIH and modulation by CAK
    • Araujo, S.J., Tirode, F., Coin, F., Pospiech, H., Syvaoja, J.E., Stucki, M., Hubscher, U., Egly, J.M. and Wood, R.D. (2000) Nucleotide excision repair of DNA with recombinant human proteins: definition of the minimal set of factors, active forms of TFIIH and modulation by CAK. Genes Dev., 14, 349-359.
    • (2000) Genes Dev. , vol.14 , pp. 349-359
    • Araujo, S.J.1    Tirode, F.2    Coin, F.3    Pospiech, H.4    Syvaoja, J.E.5    Stucki, M.6    Hubscher, U.7    Egly, J.M.8    Wood, R.D.9
  • 4
    • 0034616963 scopus 로고    scopus 로고
    • Stable binding of human XPC complex to irradiated DNA confers strong discrimination for damaged sites
    • Batty, D., Rapic'-Otrin, V., Levine, A.S. and Wood, R.D. (2000) Stable binding of human XPC complex to irradiated DNA confers strong discrimination for damaged sites. J. Mol. Biol., 300, 275-290.
    • (2000) J. Mol. Biol. , vol.300 , pp. 275-290
    • Batty, D.1    Rapic'-Otrin, V.2    Levine, A.S.3    Wood, R.D.4
  • 5
    • 0035234162 scopus 로고    scopus 로고
    • Xeroderma pigmentosum and related disorders: Defects in DNA repair and transcription
    • Bemeburg, M. and Lehmann, A.R. (2001) Xeroderma pigmentosum and related disorders: defects in DNA repair and transcription. Adv. Genet., 43, 71-102.
    • (2001) Adv. Genet. , vol.43 , pp. 71-102
    • Bemeburg, M.1    Lehmann, A.R.2
  • 6
    • 0031023182 scopus 로고    scopus 로고
    • Reconstitution of human excision nuclease with recombinant XPF-ERCC1 complex
    • Bessho, T., Sancar, A., Thompson, L.H. and Thelen, M.P. (1997) Reconstitution of human excision nuclease with recombinant XPF-ERCC1 complex. J. Biol. Chem., 272, 3833-3837.
    • (1997) J. Biol. Chem. , vol.272 , pp. 3833-3837
    • Bessho, T.1    Sancar, A.2    Thompson, L.H.3    Thelen, M.P.4
  • 7
    • 0032529167 scopus 로고    scopus 로고
    • DNA-binding polarity of human replication protein A positions nucleases in nucleotide excision repair
    • deLaat, W.L., Appeldoom, E., Sugasawa, K., Weterings, E., Jaspers, N.G. and Hoeijmakers, J.H. (1998) DNA-binding polarity of human replication protein A positions nucleases in nucleotide excision repair. Genes Dev., 12, 2598-2609.
    • (1998) Genes Dev. , vol.12 , pp. 2598-2609
    • DeLaat, W.L.1    Appeldoom, E.2    Sugasawa, K.3    Weterings, E.4    Jaspers, N.G.5    Hoeijmakers, J.H.6
  • 9
    • 0030732132 scopus 로고    scopus 로고
    • Mechanism of open complex and dual incision formation by human nucleotide excision repair factors
    • Evans, E., Moggs, J.G., Hwang, J.R., Egly, J.-M. and Wood, R.D. (1997) Mechanism of open complex and dual incision formation by human nucleotide excision repair factors. EMBO J., 16, 6559-6573.
    • (1997) EMBO J. , vol.16 , pp. 6559-6573
    • Evans, E.1    Moggs, J.G.2    Hwang, J.R.3    Egly, J.-M.4    Wood, R.D.5
  • 10
    • 0034680789 scopus 로고    scopus 로고
    • Ku entry into DNA inhibits inward DNA transactions in vitro
    • Frit, P., Li, R.Y., Arzel, D., Salles, B. and Calsou, P. (2000) Ku entry into DNA inhibits inward DNA transactions in vitro. J. Biol. Chem., 275, 35684-35691.
    • (2000) J. Biol. Chem. , vol.275 , pp. 35684-35691
    • Frit, P.1    Li, R.Y.2    Arzel, D.3    Salles, B.4    Calsou, P.5
  • 12
    • 0030767281 scopus 로고    scopus 로고
    • The DNA repair endonuclease XPG binds to proliferating cell nuclear antigen (PCNA) and shares sequence elements with the PCNA-binding regions of FEN-1 and cyclin-dependent kinase inhibitor p21
    • Gary, R., Ludwig, D.L., Comelius, H.L., MacInnes, M.A. and Park, M.S. (1997) The DNA repair endonuclease XPG binds to proliferating cell nuclear antigen (PCNA) and shares sequence elements with the PCNA-binding regions of FEN-1 and cyclin-dependent kinase inhibitor p21. J. Biol. Chem., 272, 24522-24529.
    • (1997) J. Biol. Chem. , vol.272 , pp. 24522-24529
    • Gary, R.1    Ludwig, D.L.2    Comelius, H.L.3    MacInnes, M.A.4    Park, M.S.5
  • 13
    • 0025787782 scopus 로고
    • Purification and interaction properties of the human RNA polymerase B(II) general transcription factor BTF2
    • Gerard, M., Fischer, L., Moncollin, V., Chipoulet, J.M., Chambon, P. and Egly, J.M. (1991) Purification and interaction properties of the human RNA polymerase B(II) general transcription factor BTF2. J. Biol. Chem., 266, 20940-20945.
    • (1991) J. Biol. Chem. , vol.266 , pp. 20940-20945
    • Gerard, M.1    Fischer, L.2    Moncollin, V.3    Chipoulet, J.M.4    Chambon, P.5    Egly, J.M.6
  • 14
    • 0035860719 scopus 로고    scopus 로고
    • ATP utilization by yeast replication factor C.I. ATP-mediated interaction with DNA and with proliferating cell nuclear antigen
    • Gomes, X.V. and Burgers, P.M. (2001) ATP utilization by yeast replication factor C.I. ATP-mediated interaction with DNA and with proliferating cell nuclear antigen. J. Biol. Chem., 276, 34768-34775.
    • (2001) J. Biol. Chem. , vol.276 , pp. 34768-34775
    • Gomes, X.V.1    Burgers, P.M.2
  • 15
    • 0029974576 scopus 로고    scopus 로고
    • Nucleotide excision repair in yeast is mediated by sequential assembly of repair factors and not by a pre-assembled repairosome
    • Guzder, S.M., Sung, P., Prakash, L. and Prakash, S. (1996) Nucleotide excision repair in yeast is mediated by sequential assembly of repair factors and not by a pre-assembled repairosome. J. Biol. Chem., 271, 8903-8910.
    • (1996) J. Biol. Chem. , vol.271 , pp. 8903-8910
    • Guzder, S.M.1    Sung, P.2    Prakash, L.3    Prakash, S.4
  • 16
    • 0028245269 scopus 로고
    • Recombinant replication protein A: Expression, complex formation and functional characterization
    • Henricksen, L.A., Umbricht, C.B. and Wold, M.S. (1994) Recombinant replication protein A: expression, complex formation and functional characterization. J. Biol. Chem., 269, 11121-11132.
    • (1994) J. Biol. Chem. , vol.269 , pp. 11121-11132
    • Henricksen, L.A.1    Umbricht, C.B.2    Wold, M.S.3
  • 18
    • 0026508487 scopus 로고
    • Human nucleotide excision nuclease removes thymine dimers from DNA by incising the 22nd phosphodiester bond 5′ and the 6th phosphodiester bond 3′ to the photodimer
    • Huang, J.C., Svoboda, D.L., Reardon, J.T. and Sancar, A. (1992) Human nucleotide excision nuclease removes thymine dimers from DNA by incising the 22nd phosphodiester bond 5′ and the 6th phosphodiester bond 3′ to the photodimer. Proc. Natl Acad. Sci. USA, 89, 3664-3668.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 3664-3668
    • Huang, J.C.1    Svoboda, D.L.2    Reardon, J.T.3    Sancar, A.4
  • 19
    • 0033520969 scopus 로고    scopus 로고
    • Quality control by DNA repair
    • Lindahl, T. and Wood, R.D. (1999) Quality control by DNA repair. Science, 286, 1897-1905.
    • (1999) Science , vol.286 , pp. 1897-1905
    • Lindahl, T.1    Wood, R.D.2
  • 20
    • 15844390393 scopus 로고    scopus 로고
    • A human RNA polymerase II complex associated with SRB and DNA-repair proteins
    • Maldonado, E. et al. (1996) A human RNA polymerase II complex associated with SRB and DNA-repair proteins. Nature, 381, 86-89.
    • (1996) Nature , vol.381 , pp. 86-89
    • Maldonado, E.1
  • 21
    • 0024426244 scopus 로고
    • Induction of the Escherichia coli lactose operon selectively increases repair of its transcribed DNA strand
    • Mellon, I. and Hanawalt, P.C. (1989) Induction of the Escherichia coli lactose operon selectively increases repair of its transcribed DNA strand. Nature, 342, 95-98.
    • (1989) Nature , vol.342 , pp. 95-98
    • Mellon, I.1    Hanawalt, P.C.2
  • 22
    • 0030578442 scopus 로고    scopus 로고
    • Roles of XPG and XPF/ERCC1 endonucleases in UV-induced immunostaining of PCNA in fibroblasts
    • Miura, M., Nakamura, S., Sasaki, T., Takasaki, Y., Shiomi, T. and Yamaizumi, M. (1996) Roles of XPG and XPF/ERCC1 endonucleases in UV-induced immunostaining of PCNA in fibroblasts. Exp. Cell Res., 226, 126-132.
    • (1996) Exp. Cell Res. , vol.226 , pp. 126-132
    • Miura, M.1    Nakamura, S.2    Sasaki, T.3    Takasaki, Y.4    Shiomi, T.5    Yamaizumi, M.6
  • 23
    • 0029911744 scopus 로고    scopus 로고
    • Analysis of incision sites produced by human cell extracts and purified proteins during nucleotide excision repair of a 1,3-intrastrand d(GpTpG)-cisplatin adduct
    • Moggs, J.G., Yarema, K.J., Essigmann, J.M. and Wood, R.D. (1996) Analysis of incision sites produced by human cell extracts and purified proteins during nucleotide excision repair of a 1,3-intrastrand d(GpTpG)-cisplatin adduct. J. Biol. Chem., 271, 7177-7186.
    • (1996) J. Biol. Chem. , vol.271 , pp. 7177-7186
    • Moggs, J.G.1    Yarema, K.J.2    Essigmann, J.M.3    Wood, R.D.4
  • 24
    • 0035981166 scopus 로고    scopus 로고
    • Photoimmunology and nucleotide excision repair: Impact of transcription coupled and global genome excision repair
    • Mullenders, L.H. and Bemeburg, M. (2001) Photoimmunology and nucleotide excision repair: impact of transcription coupled and global genome excision repair. J. Photochem. Photobiol. B, 65, 97-100.
    • (2001) J. Photochem. Photobiol. B , vol.65 , pp. 97-100
    • Mullenders, L.H.1    Bemeburg, M.2
  • 25
    • 0030817140 scopus 로고    scopus 로고
    • DNA damage recognition by XPA protein promotes efficient recruitment of transcription factor II H
    • Nocentini, S., Coin, F., Saijo, M., Tanaka, K. and Egly, J.-M. (1997) DNA damage recognition by XPA protein promotes efficient recruitment of transcription factor II H. J. Biol. Sci., 272, 22991-22994.
    • (1997) J. Biol. Sci. , vol.272 , pp. 22991-22994
    • Nocentini, S.1    Coin, F.2    Saijo, M.3    Tanaka, K.4    Egly, J.-M.5
  • 26
    • 0028085556 scopus 로고
    • XPG endonuclease makes the 3′ incision in human DNA nucleotide excision repair
    • O'Donovan, A., Davies, A.A., Moggs, J.G., West, S.C. and Wood, R.D. (1994) XPG endonuclease makes the 3′ incision in human DNA nucleotide excision repair. Nature, 371, 432-435.
    • (1994) Nature , vol.371 , pp. 432-435
    • O'Donovan, A.1    Davies, A.A.2    Moggs, J.G.3    West, S.C.4    Wood, R.D.5
  • 27
    • 0028932889 scopus 로고
    • The general transcription-repair factor TFIIH is recruited to the excision repair complex by the XPA protein independent of the TFIIE transcription factor
    • Park, C.H., Mu, D., Reardon, J.T. and Sancar, A. (1995) The general transcription-repair factor TFIIH is recruited to the excision repair complex by the XPA protein independent of the TFIIE transcription factor. J. Biol. Chem., 270, 4896-4902.
    • (1995) J. Biol. Chem. , vol.270 , pp. 4896-4902
    • Park, C.H.1    Mu, D.2    Reardon, J.T.3    Sancar, A.4
  • 28
    • 0036318818 scopus 로고    scopus 로고
    • Molecular anatomy of the human excision nuclease assembled at sites of DNA damage
    • Reardon, J.T. and Sancar, A. (2002) Molecular anatomy of the human excision nuclease assembled at sites of DNA damage. Mol. Cell. Biol., 22, 5938-5945.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 5938-5945
    • Reardon, J.T.1    Sancar, A.2
  • 29
    • 0028241532 scopus 로고
    • The DNA-dependent ATPase activity associated with the class II transcription factor BTF2/TFIIH
    • Roy, R., Schaeffer, L., Humbert, S., Vermeulen, W., Weeda, G. and Egly, J.M. (1994) The DNA-dependent ATPase activity associated with the class II transcription factor BTF2/TFIIH. J. Biol. Chem., 269, 9826-9832.
    • (1994) J. Biol. Chem. , vol.269 , pp. 9826-9832
    • Roy, R.1    Schaeffer, L.2    Humbert, S.3    Vermeulen, W.4    Weeda, G.5    Egly, J.M.6
  • 31
    • 0028965151 scopus 로고
    • Nucleotide excision repair DNA synthesis by DNA polymerase epsilon in the presence of PCNA, RFC and RPA
    • Shivji, M.K.K., Podust, V.N., Hubsher, U. and Wood, R.D. (1995) Nucleotide excision repair DNA synthesis by DNA polymerase epsilon in the presence of PCNA, RFC and RPA. Biochemistry, 34, 5011-5017.
    • (1995) Biochemistry , vol.34 , pp. 5011-5017
    • Shivji, M.K.K.1    Podust, V.N.2    Hubsher, U.3    Wood, R.D.4
  • 32
    • 0032619108 scopus 로고    scopus 로고
    • Dual-incision assays for nucleotide excision repair using DNA with a lesion at a specific site
    • Shivji, M.K., Moggs, J.G., Kuraoka, I. and Wood, R.D. (1999) Dual-incision assays for nucleotide excision repair using DNA with a lesion at a specific site. Methods Mol. Biol., 113, 373-392.
    • (1999) Methods Mol. Biol. , vol.113 , pp. 373-392
    • Shivji, M.K.1    Moggs, J.G.2    Kuraoka, I.3    Wood, R.D.4
  • 33
    • 16044373761 scopus 로고    scopus 로고
    • Xeroderma pigmentosum group F caused by a defect in a structure-specific DNA repair endonuclease
    • Sijbers, A.M. et al. (1996) Xeroderma pigmentosum group F caused by a defect in a structure-specific DNA repair endonuclease. Cell, 86, 811-822.
    • (1996) Cell , vol.86 , pp. 811-822
    • Sijbers, A.M.1
  • 34
    • 0035826894 scopus 로고    scopus 로고
    • TFIIH action in transcription initiation and promoter escape requires distinct regions of downstream promoter DNA
    • Spangler, L., Wang, X., Conaway, J.W., Conaway, R.C. and Dvir, A. (2001) TFIIH action in transcription initiation and promoter escape requires distinct regions of downstream promoter DNA. Proc. Natl Acad. Sci. USA, 98, 5544-5549.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 5544-5549
    • Spangler, L.1    Wang, X.2    Conaway, J.W.3    Conaway, R.C.4    Dvir, A.5
  • 35
    • 0032502760 scopus 로고    scopus 로고
    • Functional analysis of human replication protein A in nucleotide excision repair
    • Stigger, E., Drissi, R. and Lee, S.H. (1998) Functional analysis of human replication protein A in nucleotide excision repair. J. Biol. Chem., 273, 9337-9343.
    • (1998) J. Biol. Chem. , vol.273 , pp. 9337-9343
    • Stigger, E.1    Drissi, R.2    Lee, S.H.3
  • 38
    • 0028885363 scopus 로고
    • Different forms of TFIIH for transcription and DNA repair: Holo-TFIIH and a nucleotide excision repairosome
    • Svejstrup, J.Q., Wang, Z., Feaver, W.J., Wu, X., Bushnell, D.A., Donahue, T.F., Friedberg, E.C. and Komberg, R.D. (1995) Different forms of TFIIH for transcription and DNA repair: holo-TFIIH and a nucleotide excision repairosome. Cell, 80, 21-28.
    • (1995) Cell , vol.80 , pp. 21-28
    • Svejstrup, J.Q.1    Wang, Z.2    Feaver, W.J.3    Wu, X.4    Bushnell, D.A.5    Donahue, T.F.6    Friedberg, E.C.7    Komberg, R.D.8
  • 39
    • 0036094122 scopus 로고    scopus 로고
    • Nucleotide excision repair and chromatin remodeling
    • Ura, K. and Hayes, J.J. (2002) Nucleotide excision repair and chromatin remodeling. Eur. J. Biochem., 269, 2288-2293.
    • (2002) Eur. J. Biochem. , vol.269 , pp. 2288-2293
    • Ura, K.1    Hayes, J.J.2
  • 40
    • 0031463309 scopus 로고    scopus 로고
    • UV and cisplatin lesions lure basal transcription factor TFIID/TBP
    • Vichi, P., Coin, F., Renaud, J.P., Moras, D. and Egly, J.M. (1997) UV and cisplatin lesions lure basal transcription factor TFIID/TBP. EMBO J., 16, 7444-7456.
    • (1997) EMBO J. , vol.16 , pp. 7444-7456
    • Vichi, P.1    Coin, F.2    Renaud, J.P.3    Moras, D.4    Egly, J.M.5
  • 41
    • 17944361949 scopus 로고    scopus 로고
    • Sequential assembly of the nucleotide excision repair factors in vivo
    • Volker, M. et al. (2001) Sequential assembly of the nucleotide excision repair factors in vivo. Mol. Cell, 8, 213-224.
    • (2001) Mol. Cell , vol.8 , pp. 213-224
    • Volker, M.1
  • 42
    • 0032499719 scopus 로고    scopus 로고
    • Assembly, subunit composition and footprint of human DNA repair excision nuclease
    • Wakasugi, M. and Sancar, A. (1998) Assembly, subunit composition and footprint of human DNA repair excision nuclease. Proc. Natl Acad. Sci. USA, 95, 6669-6674.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 6669-6674
    • Wakasugi, M.1    Sancar, A.2
  • 43
    • 0033603338 scopus 로고    scopus 로고
    • Order of assembly of human DNA repair excision nuclease
    • Wakasugi, M. and Sancar, A. (1999) Order of assembly of human DNA repair excision nuclease. J. Biol. Chem., 274, 18759-18768.
    • (1999) J. Biol. Chem. , vol.274 , pp. 18759-18768
    • Wakasugi, M.1    Sancar, A.2
  • 44
    • 0034733022 scopus 로고    scopus 로고
    • RPA stabilizes the XPA-damaged DNA complex through protein-protein interaction
    • Wang, M., Mahrenholz, A. and Lee, S.H. (2000) RPA stabilizes the XPA-damaged DNA complex through protein-protein interaction. Biochemistry, 39, 6433-6439.
    • (2000) Biochemistry , vol.39 , pp. 6433-6439
    • Wang, M.1    Mahrenholz, A.2    Lee, S.H.3
  • 45
    • 0031943276 scopus 로고    scopus 로고
    • Yeast RNA polymerase II transcription in vitro is inhibited in the presence of nucleotide excision repair: Complementation of inhibition by Holo-TFIIH and requirement for RAD26
    • You, Z., Feaver, W.J. and Friedberg, E.C. (1998) Yeast RNA polymerase II transcription in vitro is inhibited in the presence of nucleotide excision repair: complementation of inhibition by Holo-TFIIH and requirement for RAD26. Mol. Cell. Biol., 18, 2668-2676.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 2668-2676
    • You, Z.1    Feaver, W.J.2    Friedberg, E.C.3
  • 46
    • 0037470239 scopus 로고    scopus 로고
    • Biochemical analysis of the damage recognition process in nucleotide excision repair
    • You, J.S., Wang, M. and Lee, S.H. (2003) Biochemical analysis of the damage recognition process in nucleotide excision repair. J. Biol. Chem., 278, 7476-7485.
    • (2003) J. Biol. Chem. , vol.278 , pp. 7476-7485
    • You, J.S.1    Wang, M.2    Lee, S.H.3
  • 47
    • 0033230401 scopus 로고    scopus 로고
    • Multiple competition reactions for RPA order the assembly of the DNA polymerase delta holoenzyme
    • Yuzhakov, A., Kelman, Z., Hurwitz, J. and O'Donnell, M. (1999) Multiple competition reactions for RPA order the assembly of the DNA polymerase delta holoenzyme. EMBO J., 18, 6189-6199.
    • (1999) EMBO J. , vol.18 , pp. 6189-6199
    • Yuzhakov, A.1    Kelman, Z.2    Hurwitz, J.3    O'Donnell, M.4
  • 48
    • 0029074137 scopus 로고
    • Recycling of the general transcription factors during RNA polymerase II transcription
    • Zawel, L., Kumar, K.P. and Reinberg, D. (1995) Recycling of the general transcription factors during RNA polymerase II transcription. Genes Dev., 9, 1479-1490.
    • (1995) Genes Dev. , vol.9 , pp. 1479-1490
    • Zawel, L.1    Kumar, K.P.2    Reinberg, D.3
  • 49
    • 0034707047 scopus 로고    scopus 로고
    • The DNA damage response: Putting checkpoints in perspective
    • Zhou, B.B. and Elledge, S.J. (2000) The DNA damage response: putting checkpoints in perspective. Nature, 408, 433-439.
    • (2000) Nature , vol.408 , pp. 433-439
    • Zhou, B.B.1    Elledge, S.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.