-
1
-
-
0030297089
-
The indigenous gastrointestinal microflora
-
Berg RD: The indigenous gastrointestinal microflora. Trends Microbiol 1996;4:430-435.
-
(1996)
Trends Microbiol
, vol.4
, pp. 430-435
-
-
Berg, R.D.1
-
3
-
-
0032855518
-
Gene transfer, speciation, and the evolution of bacterial genomes
-
Lawrence JG: Gene transfer, speciation, and the evolution of bacterial genomes. Curr Opin Microbiol 1999;2:519-523.
-
(1999)
Curr Opin Microbiol
, vol.2
, pp. 519-523
-
-
Lawrence, J.G.1
-
4
-
-
0034682335
-
Lateral gene transfer and the nature of bacterial innovation
-
Ochman H, Lawrence JG, Groisman EA: Lateral gene transfer and the nature of bacterial innovation. Nature 2000;405:299-304.
-
(2000)
Nature
, vol.405
, pp. 299-304
-
-
Ochman, H.1
Lawrence, J.G.2
Groisman, E.A.3
-
5
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, et al: The complete genome sequence of Escherichia coli K-12. Science 1997;277:1453-1474.
-
(1997)
Science
, vol.277
, pp. 1453-1474
-
-
Blattner, F.R.1
Plunkett III, G.2
Bloch, C.A.3
Perna, N.T.4
Burland, V.5
-
6
-
-
33748082663
-
How to become a uropathogen: Comparative genomic analysis of extraintestinal pathogenic Escherichia coli strains
-
Brzuszkiewicz E, Brgemann H, Liesegang H, Emmerth M, Lschler T, et al: How to become a uropathogen: comparative genomic analysis of extraintestinal pathogenic Escherichia coli strains. Proc Natl Acad Sci USA 2006;103:12879- 12884.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 12879-12884
-
-
Brzuszkiewicz, E.1
Brgemann, H.2
Liesegang, H.3
Emmerth, M.4
Lschler, T.5
-
7
-
-
33645827531
-
Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: A comparative genomics approach
-
Chen SL, Hung CS, Xu J, Reigstad CS, Magrini V, et al: Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach. Proc Natl Acad Sci USA 2006;103:5977-5982.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 5977-5982
-
-
Chen, S.L.1
Hung, C.S.2
Xu, J.3
Reigstad, C.S.4
Magrini, V.5
-
8
-
-
41549115091
-
The complete genome sequence of Escherichia coli DH10B: Insights into the biology of a laboratory workhorse
-
Durfee T, Nelson R, Baldwin S, Plunkett G 3rd, Burland V, et al: The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse. J Bacteriol 2008;190:2597-2606.
-
(2008)
J Bacteriol
, vol.190
, pp. 2597-2606
-
-
Durfee, T.1
Nelson, R.2
Baldwin, S.3
Plunkett III, G.4
Burland, V.5
-
9
-
-
31544438578
-
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
-
Hayashi K, Morooka N, Yamamoto Y, Fujita K, Isono K, et al: Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol Syst Biol 2006;2:2006.0007.
-
(2006)
Mol Syst Biol
, vol.2
, pp. 20060007
-
-
Hayashi, K.1
Morooka, N.2
Yamamoto, Y.3
Fujita, K.4
Isono, K.5
-
10
-
-
34247846229
-
The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes
-
Johnson TJ, Kariyawasam S, Wannemuehler Y, Mangiamele P, Johnson SJ, et al: The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes. J Bacteriol 2007;189:3228-3236.
-
(2007)
J Bacteriol
, vol.189
, pp. 3228-3236
-
-
Johnson, T.J.1
Kariyawasam, S.2
Wannemuehler, Y.3
Mangiamele, P.4
Johnson, S.J.5
-
11
-
-
0035945586
-
Genome sequence of enterohaemorrhagic Escherichia coli O157:H7
-
Perna NT, Plunkett G 3rd, Burland V, Mau B, Glasner JD, et al: Genome sequence of enterohaemorrhagic Escherichia coli O157:H7. Nature 2001;409: 529-533.
-
(2001)
Nature
, vol.409
, pp. 529-533
-
-
Perna, N.T.1
Plunkett III, G.2
Burland, V.3
Mau, B.4
Glasner, J.D.5
-
12
-
-
0037168538
-
Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli
-
Welch RA, Burland V, Plunkett G 3rd, Redford P, Roesch P, et al: Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli. Proc Natl Acad Sci USA 2002;99: 17020-17024.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 17020-17024
-
-
Welch, R.A.1
Burland, V.2
Plunkett III, G.3
Redford, P.4
Roesch, P.5
-
13
-
-
24044488599
-
(Patho-)Genomics of Escherichia coli
-
Dobrindt U: (Patho-)Genomics of Escherichia coli. Int J Med Microbiol 2005;295:357-371.
-
(2005)
Int J Med Microbiol
, vol.295
, pp. 357-371
-
-
Dobrindt, U.1
-
14
-
-
0031963154
-
Distribution of chromosome length variation in natural isolates of Escherichia coli
-
Bergthorsson U, Ochman H: Distribution of chromosome length variation in natural isolates of Escherichia coli. Mol Biol Evol 1998;15:6-16.
-
(1998)
Mol Biol Evol
, vol.15
, pp. 6-16
-
-
Bergthorsson, U.1
Ochman, H.2
-
16
-
-
33749565756
-
Pathogenicity islands: A molecular toolbox for bacterial virulence
-
Gal-Mor O, Finlay BB: Pathogenicity islands: a molecular toolbox for bacterial virulence. Cell Microbiol 2006;8:1707-1719.
-
(2006)
Cell Microbiol
, vol.8
, pp. 1707-1719
-
-
Gal-Mor, O.1
Finlay, B.B.2
-
17
-
-
34548816493
-
Extensive genomic diversity and selective conservation of virulence-determinants in enterohemorrhagic Escherichia coli strains of O157 and non-O157 serotypes
-
Ogura Y, Ooka T, Asadulghani, Terajima J, Nougayrede JP, et al: Extensive genomic diversity and selective conservation of virulence-determinants in enterohemorrhagic Escherichia coli strains of O157 and non-O157 serotypes. Genome Biol 2007;8:R138.
-
(2007)
Genome Biol
, vol.8
-
-
Ogura, Y.1
Ooka, T.2
Asadulghani3
Terajima, J.4
Nougayrede, J.P.5
-
18
-
-
0037168552
-
Genomic diversity of enterohemorrhagic Escherichia coli O157 revealed by whole genome PCR scanning
-
Ohnishi M, Terajima J, Kurokawa K, Nakayama K, Murata T, et al: Genomic diversity of enterohemorrhagic Escherichia coli O157 revealed by whole genome PCR scanning. Proc Natl Acad Sci USA 2002;99:17043-17048.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 17043-17048
-
-
Ohnishi, M.1
Terajima, J.2
Kurokawa, K.3
Nakayama, K.4
Murata, T.5
-
19
-
-
33749515943
-
An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination
-
Tobe T, Beatson SA, Taniguchi H, Abe H, Bailey CM, et al: An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination. Proc Natl Acad Sci USA 2006;103:14941-14946.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 14941-14946
-
-
Tobe, T.1
Beatson, S.A.2
Taniguchi, H.3
Abe, H.4
Bailey, C.M.5
-
20
-
-
34250356064
-
Genome evolution in major Escherichia coli O157:H7 lineages
-
Zhang Y, Laing C, Steele M, Ziebell K, Johnson R, et al: Genome evolution in major Escherichia coli O157:H7 lineages. BMC Genomics 2007;8:121.
-
(2007)
BMC Genomics
, vol.8
, pp. 121
-
-
Zhang, Y.1
Laing, C.2
Steele, M.3
Ziebell, K.4
Johnson, R.5
-
21
-
-
35348853833
-
Extraintestinal pathogenic Escherichia coli strains of avian and human origin: Link between phylogenetic relationships and common virulence patterns
-
Moulin-Schouleur M, Reperant M, Laurent S, Bree A, Mignon-Grasteau S, et al: Extraintestinal pathogenic Escherichia coli strains of avian and human origin: link between phylogenetic relationships and common virulence patterns. J Clin Microbiol 2007; 45:3366-3376.
-
(2007)
J Clin Microbiol
, vol.45
, pp. 3366-3376
-
-
Moulin-Schouleur, M.1
Reperant, M.2
Laurent, S.3
Bree, A.4
Mignon-Grasteau, S.5
-
22
-
-
3843116530
-
Analysis of the genome structure of the nonpathogenic probiotic Escherichia coli strain Nissle 1917
-
Grozdanov L, Raasch C, Schulze J, Sonnenborn U, Gottschalk G, et al: Analysis of the genome structure of the nonpathogenic probiotic Escherichia coli strain Nissle 1917. J Bacteriol 2004;186:5432-5441.
-
(2004)
J Bacteriol
, vol.186
, pp. 5432-5441
-
-
Grozdanov, L.1
Raasch, C.2
Schulze, J.3
Sonnenborn, U.4
Gottschalk, G.5
-
23
-
-
13444272526
-
Characterization of the flexible genome complement of the commensal Escherichia coli strain A0 34/86 (O83:K24:H31)
-
Hejnova J, Dobrindt U, Nemcova R, Rusniok C, Bomba A, et al: Characterization of the flexible genome complement of the commensal Escherichia coli strain A0 34/86 (O83:K24:H31). Microbiology 2005;151:385-398.
-
(2005)
Microbiology
, vol.151
, pp. 385-398
-
-
Hejnova, J.1
Dobrindt, U.2
Nemcova, R.3
Rusniok, C.4
Bomba, A.5
-
24
-
-
0038780801
-
Cytolethal distending toxin gene cluster in enterohemorrhagic Escherichia coli O157:H- andO157:H7: Characterization and evolutionary considerations
-
Janka A, Bielaszewska M, Dobrindt U, Greune L, Schmidt MA, Karch H: Cytolethal distending toxin gene cluster in enterohemorrhagic Escherichia coli O157:H- and O157:H7: characterization and evolutionary considerations. Infect Immun 2003;71:3634-3638.
-
(2003)
Infect Immun
, vol.71
, pp. 3634-3638
-
-
Janka, A.1
Bielaszewska, M.2
Dobrindt, U.3
Greune, L.4
Schmidt, M.A.5
Karch, H.6
-
25
-
-
34547526988
-
Commensal and pathogenic Escherichia coli use a common pilus adherence factor for epithelial cell colonization
-
Rendon MA, Saldana Z, Erdem AL, Monteiro-Neto V, Vazquez A, et al: Commensal and pathogenic Escherichia coli use a common pilus adherence factor for epithelial cell colonization. Proc Natl Acad Sci USA 2007;104:10637-10642.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 10637-10642
-
-
Rendon, M.A.1
Saldana, Z.2
Erdem, A.L.3
Monteiro-Neto, V.4
Vazquez, A.5
-
26
-
-
0031883473
-
Prevalence of the 'high-pathogenicity island' of Yersinia species among Escherichia coli strains that are pathogenic to humans
-
Schubert S, Rakin A, Karch H, Carniel E, Heesemann J: Prevalence of the 'high-pathogenicity island' of Yersinia species among Escherichia coli strains that are pathogenic to humans. Infect Immun 1998;66: 480-485.
-
(1998)
Infect Immun
, vol.66
, pp. 480-485
-
-
Schubert, S.1
Rakin, A.2
Karch, H.3
Carniel, E.4
Heesemann, J.5
-
27
-
-
0036841680
-
Genetic structure and distribution of four pathogenicity islands (PAI I(536) to PAI IV(536)) of uropathogenic Escherichia coli strain 536
-
Dobrindt U, Blum-Oehler G, Nagy G, Schneider G, Johann A, et al: Genetic structure and distribution of four pathogenicity islands (PAI I(536) to PAI IV(536)) of uropathogenic Escherichia coli strain 536. Infect Immun 2002;70:6365-6372.
-
(2002)
Infect Immun
, vol.70
, pp. 6365-6372
-
-
Dobrindt, U.1
Blum-Oehler, G.2
Nagy, G.3
Schneider, G.4
Johann, A.5
-
28
-
-
0031661883
-
Genomic analysis of a pathogenicity island in uropathogenic Escherichia coli CFT073:distribution of homologous sequences among isolates from patients with pyelonephritis, cystitis, and Catheter-associated bacteriuria and from fecal samples
-
Guyer DM, Kao JS, Mobley HL: Genomic analysis of a pathogenicity island in uropathogenic Escherichia coli CFT073:distribution of homologous sequences among isolates from patients with pyelonephritis, cystitis, and Catheter-associated bacteriuria and from fecal samples. Infect Immun 1998;66: 4411-4417.
-
(1998)
Infect Immun
, vol.66
, pp. 4411-4417
-
-
Guyer, D.M.1
Kao, J.S.2
Mobley, H.L.3
-
29
-
-
13444253763
-
A genomic population genetics analysis of the pathogenic enterocyte effacement island in Escherichia coli: The search for the unit of selection
-
Castillo A, Eguiarte LE, Souza V: A genomic population genetics analysis of the pathogenic enterocyte effacement island in Escherichia coli: the search for the unit of selection. Proc Natl Acad Sci USA 2005; 102:1542-1547.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 1542-1547
-
-
Castillo, A.1
Eguiarte, L.E.2
Souza, V.3
-
30
-
-
0035899929
-
A novel locus of enterocyte effacement (LEE)pathogenicity island inserted at pheV in bovine Shiga toxin-producing Escherichia coli strain O103: H2
-
Jores J, Rumer L, Kiessling S, Kaper JB, Wieler LH: A novel locus of enterocyte effacement (LEE) pathogenicity island inserted at pheV in bovine Shiga toxin-producing Escherichia coli strain O103:H2. FEMS Microbiol Lett 2001;204:75-79.
-
(2001)
FEMS Microbiol Lett
, vol.204
, pp. 75-79
-
-
Jores, J.1
Rumer, L.2
Kiessling, S.3
Kaper, J.B.4
Wieler, L.H.5
-
31
-
-
4644315305
-
Impact of the locus of enterocyte effacement pathogenicity island on the evolution of pathogenic Escherichia coli
-
Jores J, Rumer L, Wieler LH: Impact of the locus of enterocyte effacement pathogenicity island on the evolution of pathogenic Escherichia coli. Int J Med Microbiol 2004;294:103-113.
-
(2004)
Int J Med Microbiol
, vol.294
, pp. 103-113
-
-
Jores, J.1
Rumer, L.2
Wieler, L.H.3
-
32
-
-
0036488819
-
Dissemination of pheU- and pheVlocated genomic islands among enteropathogenic (EPEC) and enterohemorrhagic (EHEC) E. coli and their possible role in the horizontal transfer of the locus of enterocyte effacement (LEE)
-
Rumer L, Jores J, Kirsch P, Cavignac Y, Zehmke K, Wieler LH: Dissemination of pheU- and pheVlocated genomic islands among enteropathogenic (EPEC) and enterohemorrhagic (EHEC) E. coli and their possible role in the horizontal transfer of the locus of enterocyte effacement (LEE). Int J Med Microbiol 2003;292:463-475.
-
(2003)
Int J Med Microbiol
, vol.292
, pp. 463-475
-
-
Rumer, L.1
Jores, J.2
Kirsch, P.3
Cavignac, Y.4
Zehmke, K.5
Wieler, L.H.6
-
33
-
-
0141430076
-
Bacterial type III secretion systems are ancient and evolved by multiple horizontal-transfer events
-
Gophna U, Ron EZ, Graur D: Bacterial type III secretion systems are ancient and evolved by multiple horizontal-transfer events. Gene 2003;312:151-163.
-
(2003)
Gene
, vol.312
, pp. 151-163
-
-
Gophna, U.1
Ron, E.Z.2
Graur, D.3
-
34
-
-
33846264492
-
Molecular evolution of typical enteropathogenic Escherichia coli: Clonal analysis by multilocus sequence typing and virulence gene allelic profiling
-
Lacher DW, Steinsland H, Blank TE, Donnenberg MS, Whittam TS: Molecular evolution of typical enteropathogenic Escherichia coli: clonal analysis by multilocus sequence typing and virulence gene allelic profiling. J Bacteriol 2007;189:342-350.
-
(2007)
J Bacteriol
, vol.189
, pp. 342-350
-
-
Lacher, D.W.1
Steinsland, H.2
Blank, T.E.3
Donnenberg, M.S.4
Whittam, T.S.5
-
35
-
-
0034823881
-
Locus of enterocyte effacement from Citrobacter rodentium: Sequence analysis and evidence for horizontal transfer among attaching and effacing pathogens
-
Deng W, Li Y, Vallance BA, Finlay BB: Locus of enterocyte effacement from Citrobacter rodentium: sequence analysis and evidence for horizontal transfer among attaching and effacing pathogens. Infect Immun 2001;69:6323-6335.
-
(2001)
Infect Immun
, vol.69
, pp. 6323-6335
-
-
Deng, W.1
Li, Y.2
Vallance, B.A.3
Finlay, B.B.4
-
36
-
-
0031823632
-
Molecular evolution of a pathogenicity island from enterohemorrhagic Escherichia coli O157: H7
-
Perna NT, Mayhew GF, Posfai G, Elliott S, Donnenberg MS, et al: Molecular evolution of a pathogenicity island from enterohemorrhagic Escherichia coli O157:H7. Infect Immun 1998;66:3810-3817.
-
(1998)
Infect Immun
, vol.66
, pp. 3810-3817
-
-
Perna, N.T.1
Mayhew, G.F.2
Posfai, G.3
Elliott, S.4
Donnenberg, M.S.5
-
37
-
-
0035081299
-
Complete nucleotide sequence and analysis of the locus of enterocyte effacement from rabbit diarrheagenic Escherichia coli RDEC-1
-
Zhu C, Agin TS, Elliott SJ, Johnson LA, Thate TE, et al: Complete nucleotide sequence and analysis of the locus of enterocyte effacement from rabbit diarrheagenic Escherichia coli RDEC-1. Infect Immun 2001;69:2107-2115.
-
(2001)
Infect Immun
, vol.69
, pp. 2107-2115
-
-
Zhu, C.1
Agin, T.S.2
Elliott, S.J.3
Johnson, L.A.4
Thate, T.E.5
-
38
-
-
0031015588
-
The locus of enterocyte effacement pathogenicity island of enteropathogenic Escherichia coli encodes secretion functions and remnants of transposons at its extreme right end
-
Donnenberg MS, Lai LC, Taylor KA: The locus of enterocyte effacement pathogenicity island of enteropathogenic Escherichia coli encodes secretion functions and remnants of transposons at its extreme right end. Gene 1997;184:107-114.
-
(1997)
Gene
, vol.184
, pp. 107-114
-
-
Donnenberg, M.S.1
Lai, L.C.2
Taylor, K.A.3
-
39
-
-
0031895930
-
The complete sequence of the locus of enterocyte effacement (LEE) from enteropathogenic Escherichia coli E2348/69
-
Elliott SJ, Wainwright LA, McDaniel TK, Jarvis KG, Deng YK, et al: The complete sequence of the locus of enterocyte effacement (LEE) from enteropathogenic Escherichia coli E2348/69. Mol Microbiol 1998;28:1-4.
-
(1998)
Mol Microbiol
, vol.28
, pp. 1-4
-
-
Elliott, S.J.1
Wainwright, L.A.2
McDaniel, T.K.3
Jarvis, K.G.4
Deng, Y.K.5
-
40
-
-
34250012543
-
Presence of virulence and fitness gene modules of enterohemorrhagic Escherichia coli in atypical enteropathogenic Escherichia coli O26
-
Bielaszewska M, Sonntag AK, Schmidt MA, Karch H: Presence of virulence and fitness gene modules of enterohemorrhagic Escherichia coli in atypical enteropathogenic Escherichia coli O26. Microbes Infect 2007;9:891-897.
-
(2007)
Microbes Infect
, vol.9
, pp. 891-897
-
-
Bielaszewska, M.1
Sonntag, A.K.2
Schmidt, M.A.3
Karch, H.4
-
41
-
-
7044249838
-
Comparative analysis of locus of enterocyte effacement pathogenicity islands of atypical enteropathogenic Escherichia coli
-
Gtner JF, Schmidt MA: Comparative analysis of locus of enterocyte effacement pathogenicity islands of atypical enteropathogenic Escherichia coli. Infect Immun 2004;72:6722-6728.
-
(2004)
Infect Immun
, vol.72
, pp. 6722-6728
-
-
Gtner, J.F.1
Schmidt, M.A.2
-
42
-
-
0038519642
-
Distribution of the secondary type III secretion system locus found in enterohemorrhagic Escherichia coli O157:H7 isolates among Shiga toxin-producing E. coli strains
-
Makino S, Tobe T, Asakura H, Watarai M, Ikeda T, et al: Distribution of the secondary type III secretion system locus found in enterohemorrhagic Escherichia coli O157:H7 isolates among Shiga toxin-producing E. coli strains. J Clin Microbiol 2003;41:2341-2347.
-
(2003)
J Clin Microbiol
, vol.41
, pp. 2341-2347
-
-
Makino, S.1
Tobe, T.2
Asakura, H.3
Watarai, M.4
Ikeda, T.5
-
43
-
-
2442646490
-
The ETT2 gene cluster, encoding a second type III secretion system from Escherichia coli, is present in the majority of strains but has undergone widespread mutational attrition
-
Ren CP, Chaudhuri RR, Fivian A, Bailey CM, Antonio M, et al: The ETT2 gene cluster, encoding a second type III secretion system from Escherichia coli, is present in the majority of strains but has undergone widespread mutational attrition. J Bacteriol 2004;186:3547-3560.
-
(2004)
J Bacteriol
, vol.186
, pp. 3547-3560
-
-
Ren, C.P.1
Chaudhuri, R.R.2
Fivian, A.3
Bailey, C.M.4
Antonio, M.5
-
44
-
-
28044453495
-
A degenerate type III secretion system from septicemic Escherichia coli contributes to pathogenesis
-
Ideses D, Gophna U, Paitan Y, Chaudhuri RR, Pallen MJ, Ron EZ: A degenerate type III secretion system from septicemic Escherichia coli contributes to pathogenesis. J Bacteriol 2005;187:8164-8171.
-
(2005)
J Bacteriol
, vol.187
, pp. 8164-8171
-
-
Ideses, D.1
Gophna, U.2
Paitan, Y.3
Chaudhuri, R.R.4
Pallen, M.J.5
Ron, E.Z.6
-
45
-
-
33750951690
-
The Escherichia coli argWdsdCXA genetic island is highly variable, and E. coli K1 strains commonly possess two copies of dsd- CXA
-
Moritz RL, Welch RA: The Escherichia coli argWdsdCXA genetic island is highly variable, and E. coli K1 strains commonly possess two copies of dsd- CXA. J Clin Microbiol 2006;44:4038-4048.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 4038-4048
-
-
Moritz, R.L.1
Welch, R.A.2
-
46
-
-
33947368999
-
Colicin biology
-
Cascales E, Buchanan SK, Duche D, Kleanthous C, Lloubes R, et al: Colicin biology. Microbiol Mol Biol Rev 2007;71:158-229.
-
(2007)
Microbiol Mol Biol Rev
, vol.71
, pp. 158-229
-
-
Cascales, E.1
Buchanan, S.K.2
Duche, D.3
Kleanthous, C.4
Lloubes, R.5
-
47
-
-
33748663761
-
Complete DNA sequence of a ColBM plasmid from avian pathogenic Escherichia coli suggests that it evolved from closely related ColV virulence plasmids
-
Johnson TJ, Johnson SJ, Nolan LK: Complete DNA sequence of a ColBM plasmid from avian pathogenic Escherichia coli suggests that it evolved from closely related ColV virulence plasmids. J Bacteriol 2006;188:5975-5983.
-
(2006)
J Bacteriol
, vol.188
, pp. 5975-5983
-
-
Johnson, T.J.1
Johnson, S.J.2
Nolan, L.K.3
-
48
-
-
30744441214
-
DNA sequence of a ColV plasmid and prevalence of selected plasmid-encoded virulence genes among avian Escherichia coli strains
-
Johnson TJ, Siek KE, Johnson SJ, Nolan LK: DNA sequence of a ColV plasmid and prevalence of selected plasmid-encoded virulence genes among avian Escherichia coli strains. J Bacteriol 2006;188: 745-758.
-
(2006)
J Bacteriol
, vol.188
, pp. 745-758
-
-
Johnson, T.J.1
Siek, K.E.2
Johnson, S.J.3
Nolan, L.K.4
-
50
-
-
0028987142
-
Bor gene of phage lambda, involved in serum resistance, encodes a widely conserved outer membrane lipoprotein
-
Barondess JJ, Beckwith J: bor gene of phage lambda, involved in serum resistance, encodes a widely conserved outer membrane lipoprotein. J Bacteriol 1995;177:1247-1253.
-
(1995)
J Bacteriol
, vol.177
, pp. 1247-1253
-
-
Barondess, J.J.1
Beckwith, J.2
-
51
-
-
0020053999
-
Further characterization of complement resistance conferred on Escherichia coli by the plasmid genes traT of R100 and iss of ColV,I-K94
-
Binns MM, Mayden J, Levine RP: Further characterization of complement resistance conferred on Escherichia coli by the plasmid genes traT of R100 and iss of ColV,I-K94. Infect Immun 1982;35:654-659.
-
(1982)
Infect Immun
, vol.35
, pp. 654-659
-
-
Binns, M.M.1
Mayden, J.2
Levine, R.P.3
-
52
-
-
0029860724
-
High mutation frequencies among Escherichia coli and Salmonella pathogens
-
LeClerc JE, Li B, Payne WL, Cebula TA: High mutation frequencies among Escherichia coli and Salmonella pathogens. Science 1996;274:1208-1211.
-
(1996)
Science
, vol.274
, pp. 1208-1211
-
-
Leclerc, J.E.1
Li, B.2
Payne, W.L.3
Cebula, T.A.4
-
53
-
-
0032764023
-
Promiscuous origin of a chimeric sequence in the Escherichia coli O157:H7 genome
-
LeClerc JE, Li B, Payne WL, Cebula TA: Promiscuous origin of a chimeric sequence in the Escherichia coli O157:H7 genome. J Bacteriol 1999;181:7614-7617.
-
(1999)
J Bacteriol
, vol.181
, pp. 7614-7617
-
-
Leclerc, J.E.1
Li, B.2
Payne, W.L.3
Cebula, T.A.4
-
54
-
-
0028920524
-
A 40 kb chromosomal fragment encoding Salmonella typhimurium invasion genes is absent from the corresponding region of the Escherichia coli K-12 chromosome
-
Mills DM, Bajaj V, Lee CA: A 40 kb chromosomal fragment encoding Salmonella typhimurium invasion genes is absent from the corresponding region of the Escherichia coli K-12 chromosome. Mol Microbiol 1995;15:749-759.
-
(1995)
Mol Microbiol
, vol.15
, pp. 749-759
-
-
Mills, D.M.1
Bajaj, V.2
Lee, C.A.3
-
55
-
-
0036667438
-
Evolution of multi-gene segments in the mutS-rpoS intergenic region of Salmonella enterica serovar Typhimurium LT2
-
Kotewicz ML, Li B, Levy DD, LeClerc JE, Shifflet AW, Cebula TA: Evolution of multi-gene segments in the mutS-rpoS intergenic region of Salmonella enterica serovar Typhimurium LT2. Microbiology 2002;148:2531-2540.
-
(2002)
Microbiology
, vol.148
, pp. 2531-2540
-
-
Kotewicz, M.L.1
Li, B.2
Levy, D.D.3
Leclerc, J.E.4
Shifflet, A.W.5
Cebula, T.A.6
-
56
-
-
0035423089
-
Microbial fitness and genome dynamics
-
Tjum T, Seeberg E: Microbial fitness and genome dynamics. Trends Microbiol 2001;9:356-358.
-
(2001)
Trends Microbiol
, vol.9
, pp. 356-358
-
-
Tjum, T.1
Seeberg, E.2
-
58
-
-
0033594973
-
Mutation, recombination, and incipient speciation of bacteria in the laboratory
-
Vulic M, Lenski RE, Radman M: Mutation, recombination, and incipient speciation of bacteria in the laboratory. Proc Natl Acad Sci USA 1999;96:7348-7351.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 7348-7351
-
-
Vulic, M.1
Lenski, R.E.2
Radman, M.3
-
60
-
-
34548720319
-
The sigmaS subunit of RNA polymerase as a signal integrator and network master regulator in the general stress response in Escherichia coli
-
Klauck E, Typas A, Hengge R: The sigmaS subunit of RNA polymerase as a signal integrator and network master regulator in the general stress response in Escherichia coli. Sci Prog 2007;90:103-127.
-
(2007)
Sci Prog
, vol.90
, pp. 103-127
-
-
Klauck, E.1
Typas, A.2
Hengge, R.3
-
61
-
-
0033765065
-
An escherichia coli reference collection group B2- and uropathogen-associated polymorphism in the rpoS-mutS region of the E. coli chromosome
-
Culham DE, Wood JM: An Escherichia coli reference collection group B2- and uropathogen-associated polymorphism in the rpoS-mutS region of the E. coli chromosome. J Bacteriol 2000;182:6272-6276.
-
(2000)
J Bacteriol
, vol.182
, pp. 6272-6276
-
-
Culham, D.E.1
Wood, J.M.2
-
62
-
-
0033802038
-
Gene conservation and loss in the mutS-rpoS genomic region of pathogenic Escherichia coli
-
Herbelin CJ, Chirillo SC, Melnick KA, Whittam TS: Gene conservation and loss in the mutS-rpoS genomic region of pathogenic Escherichia coli. J Bacteriol 2000;182:5381-5390.
-
(2000)
J Bacteriol
, vol.182
, pp. 5381-5390
-
-
Herbelin, C.J.1
Chirillo, S.C.2
Melnick, K.A.3
Whittam, T.S.4
-
63
-
-
0035868383
-
Affinity of mismatchbinding protein MutS for heteroduplexes containing different mismatches
-
Brown J, Brown T, Fox KR: Affinity of mismatchbinding protein MutS for heteroduplexes containing different mismatches. Biochem J 2001;54: 627-633.
-
(2001)
Biochem J
, vol.54
, pp. 627-633
-
-
Brown, J.1
Brown, T.2
Fox, K.R.3
-
64
-
-
0034703744
-
Evolutionary implications of the frequent horizontal transfer of mismatch repair genes
-
Denamur E, Lecointre G, Darlu P, Tenaillon O, Acquaviva C, et al: Evolutionary implications of the frequent horizontal transfer of mismatch repair genes. Cell 2000;103:711-721.
-
(2000)
Cell
, vol.103
, pp. 711-721
-
-
Denamur, E.1
Lecointre, G.2
Darlu, P.3
Tenaillon, O.4
Acquaviva, C.5
-
65
-
-
0141817853
-
What is driving the acquisition of mutS and rpoS polymorphisms in Escherichia coli?
-
Ferenci T: What is driving the acquisition of mutS and rpoS polymorphisms in Escherichia coli? Trends Microbiol 2003;11:457-461.
-
(2003)
Trends Microbiol
, vol.11
, pp. 457-461
-
-
Ferenci, T.1
-
66
-
-
0141501143
-
Shiga toxin-producing Escherichia coli in Montana: Bacterial genotypes and clinical profiles
-
Jelacic JK, Damrow T, Chen GS, Jelacic S, Bielaszewska M, et al: Shiga toxin-producing Escherichia coli in Montana: bacterial genotypes and clinical profiles. J Infect Dis 2003;188:719-729.
-
(2003)
J Infect Dis
, vol.188
, pp. 719-729
-
-
Jelacic, J.K.1
Damrow, T.2
Chen, G.S.3
Jelacic, S.4
Bielaszewska, M.5
-
67
-
-
0036209592
-
Strains of Escherichia coli O157:H7 differ primarily by insertions or deletions, not singlenucleotide polymorphisms
-
Kudva IT, Evans PS, Perna NT, Barrett TJ, Ausubel FM, et al: Strains of Escherichia coli O157:H7 differ primarily by insertions or deletions, not singlenucleotide polymorphisms. J Bacteriol 2002;184: 1873-1879.
-
(2002)
J Bacteriol
, vol.184
, pp. 1873-1879
-
-
Kudva, I.T.1
Evans, P.S.2
Perna, N.T.3
Barrett, T.J.4
Ausubel, F.M.5
-
68
-
-
42449105377
-
Variation in virulence among clades of Escherichia coli O157:H7 associated with disease outbreaks
-
Manning SD, Motiwala AS, Springman AC, Qi W, Lacher DW, et al: Variation in virulence among clades of Escherichia coli O157:H7 associated with disease outbreaks. Proc Natl Acad Sci USA 2008; 105:4868-4873.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 4868-4873
-
-
Manning, S.D.1
Motiwala, A.S.2
Springman, A.C.3
Qi, W.4
Lacher, D.W.5
-
69
-
-
35748952810
-
Association of Escherichia coli O157:H7 tir polymorphisms with human infection
-
Bono JL, Keen JE, Clawson ML, Durso LM, Heaton MP, Laegreid WW: Association of Escherichia coli O157:H7 tir polymorphisms with human infection. BMC Infect Dis 2007;7:98.
-
(2007)
BMC Infect Dis
, vol.7
, pp. 98
-
-
Bono, J.L.1
Keen, J.E.2
Clawson, M.L.3
Durso, L.M.4
Heaton, M.P.5
Laegreid, W.W.6
-
70
-
-
0036843960
-
Common themes among bacteriophage- encoded virulence factors and diversity among the bacteriophages involved
-
Boyd EF, Brsow H: Common themes among bacteriophage- encoded virulence factors and diversity among the bacteriophages involved. Trends Microbiol 2002;10:521-529.
-
(2002)
Trends Microbiol
, vol.10
, pp. 521-529
-
-
Boyd, E.F.1
Brsow, H.2
-
71
-
-
34248657949
-
Stx-phages: Drivers and mediators of the evolution of STEC and STEC-like pathogens
-
Allison HE: Stx-phages: drivers and mediators of the evolution of STEC and STEC-like pathogens. Future Microbiol 2007;2:165-174.
-
(2007)
Future Microbiol
, vol.2
, pp. 165-174
-
-
Allison, H.E.1
-
72
-
-
4644358200
-
Shiga toxin-encoding bacteriophages - Genomes in motion
-
Herold S, Karch H, Schmidt H: Shiga toxin-encoding bacteriophages - genomes in motion. Int J Med Microbiol 2004;294:115-121.
-
(2004)
Int J Med Microbiol
, vol.294
, pp. 115-121
-
-
Herold, S.1
Karch, H.2
Schmidt, H.3
-
73
-
-
0035961748
-
Complete genome sequence of enterohemorrhagic Escherichia coli O157: H7 and genomic comparison with a laboratory strain K-12
-
Hayashi T, Makino K, Ohnishi M, Kurokawa K, Ishii K, et al: Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. DNA Res 2001;8:11-22.
-
(2001)
DNA Res
, vol.8
, pp. 11-22
-
-
Hayashi, T.1
Makino, K.2
Ohnishi, M.3
Kurokawa, K.4
Ishii, K.5
-
74
-
-
34250807060
-
Prevalence, virulence profiles, and clinical significance of Shiga toxin-negative variants of enterohemorrhagic Escherichia coli O157 infection in humans
-
Friedrich AW, Zhang W, Bielaszewska M, Mellmann A, Kk R, et al: Prevalence, virulence profiles, and clinical significance of Shiga toxin-negative variants of enterohemorrhagic Escherichia coli O157 infection in humans. Clin Infect Dis 2007;45:39-45.
-
(2007)
Clin Infect Dis
, vol.45
, pp. 39-45
-
-
Friedrich, A.W.1
Zhang, W.2
Bielaszewska, M.3
Mellmann, A.4
Kk, R.5
-
75
-
-
23744459355
-
Enterohemorrhagic Escherichia coli in human infection: In vivo evolution of a bacterial pathogen
-
Mellmann A, Bielaszewska M, Zimmerhackl LB, Prager R, Harmsen D, et al: Enterohemorrhagic Escherichia coli in human infection: in vivo evolution of a bacterial pathogen. Clin Infect Dis 2005; 41:785-792.
-
(2005)
Clin Infect Dis
, vol.41
, pp. 785-792
-
-
Mellmann, A.1
Bielaszewska, M.2
Zimmerhackl, L.B.3
Prager, R.4
Harmsen, D.5
-
76
-
-
46349109910
-
Shiga toxin-negative attaching and effacing Escherichia coli: Distinct clinical associations with bacterial phylogeny and virulence traits and inferred in-host pathogen evolution
-
Bielaszewska M, Middendorf B, Kk R, Friedrich AW, Fruth A, et al: Shiga toxin-negative attaching and effacing Escherichia coli: distinct clinical associations with bacterial phylogeny and virulence traits and inferred in-host pathogen evolution. Clin Infect Dis 2008;47:208-217.
-
(2008)
Clin Infect Dis
, vol.47
, pp. 208-217
-
-
Bielaszewska, M.1
Middendorf, B.2
Kk, R.3
Friedrich, A.W.4
Fruth, A.5
-
77
-
-
37849012984
-
Recycling of Shiga toxin 2 genes in sorbitol-fermenting enterohemorrhagic Escherichia coli O157:NM
-
Mellmann A, Lu S, Karch H, Xu JG, Harmsen D, et al: Recycling of Shiga toxin 2 genes in sorbitol-fermenting enterohemorrhagic Escherichia coli O157:NM. Appl Environ Microbiol 2008;74:67-72.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 67-72
-
-
Mellmann, A.1
Lu, S.2
Karch, H.3
Xu, J.G.4
Harmsen, D.5
-
78
-
-
39149129083
-
Molecular basis of commensalism in the urinary tract: Low virulence or virulence attenuation
-
Zdziarski J, Svanborg C, Wullt B, Hacker J, Dobrindt U: Molecular basis of commensalism in the urinary tract: low virulence or virulence attenuation Infect Immun 2008;76:695-703.
-
(2008)
Infect Immun
, vol.76
, pp. 695-703
-
-
Zdziarski, J.1
Svanborg, C.2
Wullt, B.3
Hacker, J.4
Dobrindt, U.5
-
79
-
-
0037337509
-
Analysis of genome plasticity in pathogenic and commensal Escherichia coli isolates by use of DNA arrays
-
Dobrindt U, Agerer F, Michaelis K, Janka A, Buchrieser C, et al: Analysis of genome plasticity in pathogenic and commensal Escherichia coli isolates by use of DNA arrays. J Bacteriol 2003;185:1831-1840.
-
(2003)
J Bacteriol
, vol.185
, pp. 1831-1840
-
-
Dobrindt, U.1
Agerer, F.2
Michaelis, K.3
Janka, A.4
Buchrieser, C.5
-
80
-
-
29644436776
-
Molecular characterization of the Escherichia coli asymptomatic bacteriuria strain 83972: The taming of a pathogen
-
Klemm P, Roos V, Ulett GC, Svanborg C, Schembri MA: Molecular characterization of the Escherichia coli asymptomatic bacteriuria strain 83972: the taming of a pathogen. Infect Immun 2006;74:781-785.
-
(2006)
Infect Immun
, vol.74
, pp. 781-785
-
-
Klemm, P.1
Roos, V.2
Ulett, G.C.3
Svanborg, C.4
Schembri, M.A.5
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