-
1
-
-
0038306145
-
Modular assembly of genes and the evolution of new functions
-
DOI 10.1023/A:1024182432483
-
Patthy L (2003) Modular assembly of genes and the evolution of new functions. Genetica 118:217-231. (Pubitemid 36821051)
-
(2003)
Genetica
, vol.118
, Issue.2-3
, pp. 217-231
-
-
Patthy, L.1
-
2
-
-
33646559207
-
On the formation of novel genes by duplication in the caenorhabditis elegans genome
-
DOI 10.1093/molbev/msj114
-
Katju V, Lynch M (2006) On the formation of novel genes by duplication in the Caenorhabditis elegans genome. Mol Biol Evol 23:1056-1067. (Pubitemid 43726071)
-
(2006)
Molecular Biology and Evolution
, vol.23
, Issue.5
, pp. 1056-1067
-
-
Katju, V.1
Lynch, M.2
-
3
-
-
33747465505
-
High rate of chimeric gene origination by retroposition in plant genomes
-
Wang W, et al. (2006) High rate of chimeric gene origination by retroposition in plant genomes. Plant Cell 18:1791-1802.
-
(2006)
Plant Cell
, vol.18
, pp. 1791-1802
-
-
Wang, W.1
-
5
-
-
61549086519
-
Formation and longevity of chimeric and duplicate genes in Drosophila melanogaster
-
Rogers RL, Bedford T, Hartl DL (2009) Formation and longevity of chimeric and duplicate genes in Drosophila melanogaster. Genetics 181:313-322.
-
(2009)
Genetics
, vol.181
, pp. 313-322
-
-
Rogers, R.L.1
Bedford, T.2
Hartl, D.L.3
-
6
-
-
50649097020
-
On the origin of new genes in Drosophila
-
Zhou Q, et al. (2008) On the origin of new genes in Drosophila. Genome Res 18:1446-1455.
-
(2008)
Genome Res
, vol.18
, pp. 1446-1455
-
-
Zhou, Q.1
-
7
-
-
0027905006
-
Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila
-
Long M, Langley CH (1993) Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila. Science 260:91-95. (Pubitemid 23122751)
-
(1993)
Science
, vol.259
, Issue.5104
, pp. 91-95
-
-
Long, M.1
Langley, C.H.2
-
8
-
-
0033850591
-
The origin of the Jingwei gene and the complex modular structure of its parental gene, yellow emperor, in Drosophila melanogaster
-
Wang W, Zhang J, Alvarez C, Llopart A, Long M (2000) The origin of the Jingwei gene and the complex modular structure of its parental gene, yellow emperor, in Drosophila melanogaster. Mol Biol Evol 17:1294-1301.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 1294-1301
-
-
Wang, W.1
Zhang, J.2
Alvarez, C.3
Llopart, A.4
Long, M.5
-
9
-
-
0032506534
-
Selective sweep of a newly evolved sperm-specific gene in Drosophila
-
DOI 10.1038/25126
-
Nurminsky DI, Nurminskaya MV, De Aguiar D, Hartl DL (1998) Selective sweep of a newly evolved sperm-specific gene in Drosophila. Nature 396:572-575. (Pubitemid 28563717)
-
(1998)
Nature
, vol.396
, Issue.6711
, pp. 572-575
-
-
Nurminsky, D.I.1
Nurminskaya, M.V.2
De Aguiar, D.3
Hartl, D.L.4
-
10
-
-
23844533589
-
Parallel evolution of chimeric fusion genes
-
Jones CD, Begun DJ (2005) Parallel evolution of chimeric fusion genes. Proc Natl Acad Sci USA 102:11373-11378.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 11373-11378
-
-
Jones, C.D.1
Begun, D.J.2
-
11
-
-
20444420187
-
Origin and evolution of a chimeric fusion gene in Drosophila subobscura, D. madeirensis and D. guanche
-
Jones CD, Custer AW, Begun DJ (2005) Origin and evolution of a chimeric fusion gene in Drosophila subobscura, D. madeirensis and D. guanche. Genetics 170:207-219.
-
(2005)
Genetics
, vol.170
, pp. 207-219
-
-
Jones, C.D.1
Custer, A.W.2
Begun, D.J.3
-
12
-
-
58149347834
-
Patterns of amino acid evolution in the Drosophila ananassae chimeric gene, siren, parallel those of other Adh-derived chimeras
-
Shih HJ, Jones CD (2008) Patterns of amino acid evolution in the Drosophila ananassae chimeric gene, siren, parallel those of other Adh-derived chimeras. Genetics 180:1261-1263.
-
(2008)
Genetics
, vol.180
, pp. 1261-1263
-
-
Shih, H.J.1
Jones, C.D.2
-
13
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
14
-
-
1842582668
-
Yeast Nfs1p Is Involved in Thio-modification of Both Mitochondrial and Cytoplasmic tRNAs
-
DOI 10.1074/jbc.M312448200
-
Nakai Y, et al. (2004) Yeast Nfs1p is involved in thio-modification of both mitochondrial and cytoplasmic tRNAs. J Biol Chem 279:12363-12368. (Pubitemid 38445803)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.13
, pp. 12363-12368
-
-
Nakai, Y.1
Umeda, N.2
Suzuki, T.3
Nakai, M.4
Hayashi, H.5
Watanabe, K.6
Kagamiyama, H.7
-
15
-
-
37349111071
-
Drosophila ESC-like can substitute for ESC and becomes required for Polycomb silencing if ESC is absent
-
DOI 10.1016/j.ydbio.2007.10.025, PII S0012160607014704
-
Kurzhals RL, Tie F, Stratton CA, Harte PJ (2008) Drosophila ESC-like can substitute for ESC and becomes required for Polycomb silencing if ESC is absent. Dev Biol 313:293-306. (Pubitemid 350302047)
-
(2008)
Developmental Biology
, vol.313
, Issue.1
, pp. 293-306
-
-
Kurzhals, R.L.1
Tie, F.2
Stratton, C.A.3
Harte, P.J.4
-
16
-
-
33947191081
-
The N terminus of Drosophila ESC binds directly to histone H3 and is required for E(Z)-dependent trimethylation of H3 lysine 27
-
DOI 10.1128/MCB.01822-06
-
Tie F, Stratton CA, Kurzhals RL, Harte PJ (2007) The N terminus of Drosophila ESC binds directly to histone H3 and is required for E(Z)-dependent trimethylation of H3 lysine 27. Mol Cell Biol 27:2014-2026. (Pubitemid 46418460)
-
(2007)
Molecular and Cellular Biology
, vol.27
, Issue.6
, pp. 2014-2026
-
-
Tie, F.1
Stratton, C.A.2
Kurzhals, R.L.3
Harte, P.J.4
-
17
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima F (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-595.
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
19
-
-
0036188913
-
Interactions between natural selection, recombination and gene density in the genes of Drosophila
-
Hey J, Kliman RM (2002) Interactions between natural selection, recombination and gene density in the genes of Drosophila. Genetics 160:595-608. (Pubitemid 34194533)
-
(2002)
Genetics
, vol.160
, Issue.2
, pp. 595-608
-
-
Hey, J.1
Kliman, R.M.2
-
20
-
-
15544387147
-
Genomic heterogeneity of background substitutional patterns in Drosophila melanogaster
-
Singh ND, Arndt PF, Petrov DA (2005) Genomic heterogeneity of background substitutional patterns in Drosophila melanogaster. Genetics 169:709-722.
-
(2005)
Genetics
, vol.169
, pp. 709-722
-
-
Singh, N.D.1
Arndt, P.F.2
Petrov, D.A.3
-
21
-
-
28644440530
-
The signature of positive selection on standing genetic variation
-
Przeworski M, Coop G, Wall JD (2005) The signature of positive selection on standing genetic variation. Evolution 59:2312-2323.
-
(2005)
Evolution
, vol.59
, pp. 2312-2323
-
-
Przeworski, M.1
Coop, G.2
Wall, J.D.3
-
22
-
-
37549030093
-
Adaptation from standing genetic variation
-
Barrett RD, Schluter D (2008) Adaptation from standing genetic variation. Trends Ecol Evol 23:38-44.
-
(2008)
Trends Ecol Evol
, vol.23
, pp. 38-44
-
-
Barrett, R.D.1
Schluter, D.2
-
23
-
-
0036311179
-
Analysis of Spt7 function in the Saccharomyces cerevisiae SAGA coactivator complex
-
Wu PY, Winston F (2002) Analysis of Spt7 function in the Saccharomyces cerevisiae SAGA coactivator complex. Mol Cell Biol 22:5367-5379.
-
(2002)
Mol Cell Biol
, vol.22
, pp. 5367-5379
-
-
Wu, P.Y.1
Winston, F.2
-
24
-
-
77953010033
-
Regulatory divergence in Drosophila revealed by mRNA-seq
-
in press
-
McManus CJ, et al. (2010) Regulatory divergence in Drosophila revealed by mRNA-seq. Genome Res, in press.
-
(2010)
Genome Res
-
-
McManus, C.J.1
-
25
-
-
1542316920
-
Anomalies in the expression profile of interspecific hybrids of Drosophila melanogaster and Drosophila simulans
-
Ranz JM, Namgyal K, Gibson G, Hartl DL (2004) Anomalies in the expression profile of interspecific hybrids of Drosophila melanogaster and Drosophila simulans. Genome Res 14:373-379.
-
(2004)
Genome Res
, vol.14
, pp. 373-379
-
-
Ranz, J.M.1
Namgyal, K.2
Gibson, G.3
Hartl, D.L.4
-
26
-
-
67649292737
-
Unlocking the secrets of the genome
-
modENCODE Consortium
-
Celniker SE, et al.; modENCODE Consortium (2009) Unlocking the secrets of the genome. Nature 459:927-930.
-
(2009)
Nature
, vol.459
, pp. 927-930
-
-
Celniker, S.E.1
-
27
-
-
0035737292
-
The gene search system: Its application to functional genomics in Drosophila melanogaster
-
Aigaki T, Ohsako T, Toba G, Seong K, Matsuo T (2001) The gene search system: its application to functional genomics in Drosophila melanogaster. J Neurogenet 15:169-178. (Pubitemid 34467878)
-
(2001)
Journal of Neurogenetics
, vol.15
, Issue.3-4
, pp. 169-178
-
-
Aigaki, T.1
Ohsako, T.2
Toba, G.3
Seong, K.-H.4
Matsuo, T.5
-
28
-
-
20044396187
-
A genetic screen for suppressors of Drosophila NSF2 neuromuscular junction overgrowth
-
Laviolette MJ, Nunes P, Peyre JB, Aigaki T, Stewart BA (2005) A genetic screen for suppressors of Drosophila NSF2 neuromuscular junction overgrowth. Genetics 170:779-792.
-
(2005)
Genetics
, vol.170
, pp. 779-792
-
-
Laviolette, M.J.1
Nunes, P.2
Peyre, J.B.3
Aigaki, T.4
Stewart, B.A.5
-
29
-
-
0037096093
-
Dominant-negative NSF2 disrupts the structure and function of Drosophila neuromuscular synapses
-
Stewart BA, et al. (2002) Dominant-negative NSF2 disrupts the structure and function of Drosophila neuromuscular synapses. J Neurobiol 51:261-271.
-
(2002)
J Neurobiol
, vol.51
, pp. 261-271
-
-
Stewart, B.A.1
-
30
-
-
0018263844
-
Why genes in pieces?
-
Gilbert W (1978) Why genes in pieces? Nature 271:501.
-
(1978)
Nature
, vol.271
, pp. 501
-
-
Gilbert, W.1
-
31
-
-
0037968831
-
Origin and evolution of a new gene expressed in the Drosophila sperm axoneme
-
Ranz JM, Ponce AR, Hartl DL, Nurminsky D (2003) Origin and evolution of a new gene expressed in the Drosophila sperm axoneme. Genetica 118:233-244.
-
(2003)
Genetica
, vol.118
, pp. 233-244
-
-
Ranz, J.M.1
Ponce, A.R.2
Hartl, D.L.3
Nurminsky, D.4
-
32
-
-
66049162655
-
Execution of nonsense-mediated mRNA decay: What defines a substrate?
-
Rebbapragada I, Lykke-Andersen J (2009) Execution of nonsense-mediated mRNA decay: What defines a substrate? Curr Opin Cell Biol 21:394-402.
-
(2009)
Curr Opin Cell Biol
, vol.21
, pp. 394-402
-
-
Rebbapragada, I.1
Lykke-Andersen, J.2
-
33
-
-
33847057226
-
The evolutionary significance of cis-regulatory mutations
-
Wray GA (2007) The evolutionary significance of cis-regulatory mutations. Nat Rev Genet 8:206-216.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 206-216
-
-
Wray, G.A.1
-
34
-
-
34547624125
-
A novel testis ubiquitin-binding protein gene arose by exon shuffling in hominoids
-
Babushok DV, et al. (2007) A novel testis ubiquitin-binding protein gene arose by exon shuffling in hominoids. Genome Res 17:1129-1138.
-
(2007)
Genome Res
, vol.17
, pp. 1129-1138
-
-
Babushok, D.V.1
-
35
-
-
33845207999
-
Evolution and expression of chimeric POTE-actin genes in the human genome
-
Lee Y, et al. (2006) Evolution and expression of chimeric POTE-actin genes in the human genome. Proc Natl Acad Sci USA 103:17885-17890.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 17885-17890
-
-
Lee, Y.1
-
36
-
-
33947581390
-
The impact of translocations and gene fusions on cancer causation
-
Mitelman F, Johansson B, Mertens F (2007) The impact of translocations and gene fusions on cancer causation. Nat Rev Cancer 7:233-245.
-
(2007)
Nat Rev Cancer
, vol.7
, pp. 233-245
-
-
Mitelman, F.1
Johansson, B.2
Mertens, F.3
-
37
-
-
0032085975
-
Combinatorial protein design by in vitro recombination
-
Giver L, Arnold FH (1998) Combinatorial protein design by in vitro recombination. Curr Opin Chem Biol 2:335-338.
-
(1998)
Curr Opin Chem Biol
, vol.2
, pp. 335-338
-
-
Giver, L.1
Arnold, F.H.2
-
38
-
-
0037154157
-
Recombinatoric exploration of novel folded structures: A heteropolymer-based model of protein evolutionary landscapes
-
Cui Y, Wong WH, Bornberg-Bauer E, Chan HS (2002) Recombinatoric exploration of novel folded structures: a heteropolymer-based model of protein evolutionary landscapes. Proc Natl Acad Sci USA 99:809-814.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 809-814
-
-
Cui, Y.1
Wong, W.H.2
Bornberg-Bauer, E.3
Chan, H.S.4
-
39
-
-
13144257707
-
The genetic theory of adaptation: A brief history
-
Orr HA (2005) The genetic theory of adaptation: A brief history. Nat Rev Genet 6:119-127.
-
(2005)
Nat Rev Genet
, vol.6
, pp. 119-127
-
-
Orr, H.A.1
-
40
-
-
34547616501
-
The new mutation theory of phenotypic evolution
-
Nei M (2007) The new mutation theory of phenotypic evolution. Proc Natl Acad Sci USA 104:12235-12242.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 12235-12242
-
-
Nei, M.1
-
41
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond AJ, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7:214.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
|