-
1
-
-
55549141149
-
The pleiotropic cost of host-specialization in Tobacco etch potyvirus
-
(doi: 10.1016/j.meegid.2008.07.010)
-
Agudelo-Romero, P., de la Iglesia, F. & Elena, S. F. 2008 The pleiotropic cost of host-specialization in Tobacco etch potyvirus. Infect. Genet. Evol. 8, 806-814. (doi: 10.1016/j.meegid.2008.07.010)
-
(2008)
Infect. Genet. Evol.
, vol.8
, pp. 806-814
-
-
Agudelo-Romero, P.1
De La Iglesia, F.2
Elena, S.F.3
-
2
-
-
33644745138
-
Sexual reproduction selects for robustness and negative epistasis in artificial gene networks
-
(doi:10.1038/nature04488)
-
Azevedo, R. B., Lohaus, R., Srinivasan, S., Dang, K. K. & Burch, C. L. 2006 Sexual reproduction selects for robustness and negative epistasis in artificial gene networks. Nature 440, 87-90. (doi:10.1038/nature04488)
-
(2006)
Nature
, vol.440
, pp. 87-90
-
-
Azevedo, R.B.1
Lohaus, R.2
Srinivasan, S.3
Dang, K.K.4
Burch, C.L.5
-
3
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection
-
2006. (doi:10.1038/msb4100050)
-
Baba, T. et al. 2006 Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2: 2006.0008. (doi:10.1038/msb4100050)
-
(2006)
Mol. Syst. Biol.
, vol.2
, pp. 0008
-
-
Baba, T.1
-
4
-
-
40749085180
-
Pacing a small cage: Mutation and RNA viruses
-
(doi:10.1016/j.tree.2007.11.010)
-
Belshaw, R., Gardner, A., Rambaut, A. & Pybus, O. G. 2008 Pacing a small cage: mutation and RNA viruses. Trends Ecol Evol. 23, 188-193. (doi:10.1016/j.tree.2007.11.010)
-
(2008)
Trends Ecol Evol.
, vol.23
, pp. 188-193
-
-
Belshaw, R.1
Gardner, A.2
Rambaut, A.3
Pybus, O.G.4
-
5
-
-
33845864966
-
Robustness-epistasis link shapes the fitness landscape of a randomly drifting protein
-
(doi:10.1038/nature05385)
-
Bershtein, S., Segal, M., Bekerman, R., Tokuriki, N. & Tawfik, D. S. 2006 Robustness-epistasis link shapes the fitness landscape of a randomly drifting protein. Nature 444, 929-932. (doi:10.1038/nature05385)
-
(2006)
Nature
, vol.444
, pp. 929-932
-
-
Bershtein, S.1
Segal, M.2
Bekerman, R.3
Tokuriki, N.4
Tawfik, D.S.5
-
6
-
-
33645811495
-
Protein stability promotes evolvability
-
(doi:10.1073/pnas.0510098103)
-
Bloom, J. D., Labthavikul, S. T., Otey, C. R. & Arnold, F. H. 2006 Protein stability promotes evolvability. Proc. Natl Acad. Sci. USA 103, 5869-5874. (doi:10.1073/pnas.0510098103)
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 5869-5874
-
-
Bloom, J.D.1
Labthavikul, S.T.2
Otey, C.R.3
Arnold, F.H.4
-
7
-
-
9444282038
-
Evidence for positive epistasis in HIV-1
-
(doi:10.1126/science.1101786)
-
Bonhoeffer, S., Chappey, C., Parkin, N. T., Whitcomb, J. M. & Petropoulos, C. J. 2004 Evidence for positive epistasis in HIV-1. Science 306, 1547-1550. (doi:10.1126/science.1101786)
-
(2004)
Science
, vol.306
, pp. 1547-1550
-
-
Bonhoeffer, S.1
Chappey, C.2
Parkin, N.T.3
Whitcomb, J.M.4
Petropoulos, C.J.5
-
8
-
-
0030823001
-
Exceptional convergent evolution in a virus
-
Bull, J. J., Badgett, M. R., Wichman, H. A., Huelsenbeck, J. P., Hillis, D. M., Gulati, A., Ho, C. & Molineux, I. J. 1997 Exceptional convergent evolution in a virus. Genetics 147, 1497-1507.
-
(1997)
Genetics
, vol.147
, pp. 1497-1507
-
-
Bull, J.J.1
Badgett, M.R.2
Wichman, H.A.3
Huelsenbeck, J.P.4
Hillis, D.M.5
Gulati, A.6
Ho, C.7
Molineux, I.J.8
-
9
-
-
0034035485
-
Bigbenefit mutations in a bacteriophage inhibited with heat
-
Bull, J. J., Badgett, M. R. & Wichman, H. A. 2000 Bigbenefit mutations in a bacteriophage inhibited with heat. Mol. Biol. Evol. 17, 942-950.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 942-950
-
-
Bull, J.J.1
Badgett, M.R.2
Wichman, H.A.3
-
10
-
-
3142755598
-
Epistasis and its relationship to canalization in the RNA virus
-
(doi:10.1534/genetics.103.021196)
-
Burch, C. L. & Chao, L. 2004 Epistasis and its relationship to canalization in the RNA virus φ6. Genetics 167, 559-567. (doi:10.1534/genetics.103.021196)
-
(2004)
φ6. Genetics
, vol.167
, pp. 559-567
-
-
Burch, C.L.1
Chao, L.2
-
11
-
-
36348963100
-
Distribution of fitness and virulence effects caused by single-nucleotide substitutions in Tobacco Etch virus
-
(doi:10.1128/JVI.00524-07)
-
Carrasco, P., de la Iglesia, F. & Elena, S. F. 2007 Distribution of fitness and virulence effects caused by single-nucleotide substitutions in Tobacco Etch virus. J. Virol. 81, 12979-12 984. (doi:10.1128/JVI.00524-07)
-
(2007)
J. Virol.
, vol.81
, pp. 1297912984
-
-
Carrasco, P.1
De La Iglesia, F.2
Elena, S.F.3
-
12
-
-
35348892535
-
Innovation and robustness in complex regulatory gene networks
-
(doi: 10.1073/pnas.0705396104)
-
Ciliberti, S., Martin, O. C. & Wagner, A. 2007 Innovation and robustness in complex regulatory gene networks. Proc. Natl Acad. Sci. USA 104, 13 591-13 596. (doi: 10.1073/pnas.0705396104)
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 13591-13596
-
-
Ciliberti, S.1
Martin, O.C.2
Wagner, A.3
-
13
-
-
52949144577
-
Natural selection fails to optimize mutation rates for long-term adaptation on rugged fitness landscapes
-
(doi:10.1371/journal.pcbi.1000187)
-
Clune, J., Misevic, D., Ofria, C., Lenski, R. E., Elena, S. F. & Sanjuán, R. 2008 Natural selection fails to optimize mutation rates for long-term adaptation on rugged fitness landscapes. PLoS Comput Biol. 4, el000187. (doi:10.1371/journal.pcbi.1000187)
-
(2008)
PLoS Comput Biol.
, vol.4
-
-
Clune, J.1
Misevic, D.2
Ofria, C.3
Lenski, R.E.4
Elena, S.F.5
Sanjuán, R.6
-
14
-
-
0033978271
-
Evolutionary reversals during viral adaptation to alternating hosts
-
Crill, W. D., Wichman, H. A. & Bull, J. J. 2000 Evolutionary reversals during viral adaptation to alternating hosts. Genetics 154, 27-37.
-
(2000)
Genetics
, vol.154
, pp. 27-37
-
-
Crill, W.D.1
Wichman, H.A.2
Bull, J.J.3
-
15
-
-
0036811120
-
Molecular basis of adaptive convergence in experimental populations of RNA viruses
-
Cuevas, J. M., Elena, S. F. & Moya, A. 2002 Molecular basis of adaptive convergence in experimental populations of RNA viruses. Genetics 162, 533-542.
-
(2002)
Genetics
, vol.162
, pp. 533-542
-
-
Cuevas, J.M.1
Elena, S.F.2
Moya, A.3
-
16
-
-
13644256397
-
Following the very initial growth of biological RNA viral clones
-
(doi:10.1099/vir.0.80359-0)
-
Cuevas, J. M., Moya, A. & Sanjuán, R. 2005 Following the very initial growth of biological RNA viral clones. J Gen. Virol. 86, 435-443. (doi:10.1099/vir.0.80359-0)
-
(2005)
J Gen. Virol.
, vol.86
, pp. 435-443
-
-
Cuevas, J.M.1
Moya, A.2
Sanjuán, R.3
-
17
-
-
70349215645
-
A genetic background with low mutational robustness is associated with increased adaptability to a novel host in an RNA virus
-
(doi:10.1111/j.1420-9101.2009.01817.x)
-
Cuevas, J. M., Moya, A. & Sanjuán, R. 2009 A genetic background with low mutational robustness is associated with increased adaptability to a novel host in an RNA virus. J Evol. Biol. 22, 2041-2048. (doi:10.1111/j.1420-9101.2009.01817.x)
-
(2009)
J Evol. Biol.
, vol.22
, pp. 2041-2048
-
-
Cuevas, J.M.1
Moya, A.2
Sanjuán, R.3
-
18
-
-
56649089680
-
Rates of HIV immune escape and reversion: Implications for vaccination
-
(doi:10.1016/j.tim.2008.09.001)
-
Davenport, M. P., Loh, L., Petravic, J. & Kent, S. J. 2008 Rates of HIV immune escape and reversion: implications for vaccination. Trends Microbiol. 16, 561-566. (doi:10.1016/j.tim.2008.09.001)
-
(2008)
Trends Microbiol.
, vol.16
, pp. 561-566
-
-
Davenport, M.P.1
Loh, L.2
Petravic, J.3
Kent, S.J.4
-
19
-
-
0033543507
-
High frequency of cryptic deleterious mutations in
-
(doi:10.1126/science.285.5434.1748)
-
Davies, E. K., Peters, A. D. & Keightley, P. D. 1999 High frequency of cryptic deleterious mutations in Caenorhabditis elegans. Science 285, 1748-1751. (doi:10.1126/science.285.5434.1748)
-
(1999)
Caenorhabditis Elegans. Science
, vol.285
, pp. 1748-1751
-
-
Davies, E.K.1
Peters, A.D.2
Keightley, P.D.3
-
20
-
-
0013953238
-
An analysis of the clone size distribution of φX174 mutants and recombinants
-
(doi:10.1016/S0042-6822(66) 81004-8)
-
Denhardt, D. T. & Silver, R. B. 1966 An analysis of the clone size distribution of φX174 mutants and recombinants. Virology 30, 10-19. (doi:10.1016/S0042-6822(66) 81004-8)
-
(1966)
Virology
, vol.30
, pp. 10-19
-
-
Denhardt, D.T.1
Silver, R.B.2
-
21
-
-
33745907532
-
Viruses' life history: Towards a mechanistic basis of a trade-off between survival and reproduction among phages
-
(doi:10.1371/journal.pbio.0040193)
-
De Paepe, M. & Taddei, F. 2006 Viruses' life history: towards a mechanistic basis of a trade-off between survival and reproduction among phages. PLoS Biol. 4, e193. (doi:10.1371/journal.pbio.0040193)
-
(2006)
PLoS Biol.
, vol.4
-
-
De Paepe, M.1
Taddei, F.2
-
22
-
-
0030747157
-
RNA virus mutations and fitness for survival
-
(doi:10.1146/annurev.micro.51.1.151)
-
Domingo, E. & Holland, J. J. 1997 RNA virus mutations and fitness for survival. Annu. Rev. Microbiol. 51, 151-178. (doi:10.1146/annurev.micro.51.1. 151)
-
(1997)
Annu. Rev. Microbiol.
, vol.51
, pp. 151-178
-
-
Domingo, E.1
Holland, J.J.2
-
23
-
-
73649127602
-
The fitness effects of random mutations in single-stranded DNA and RNA bacteriophages
-
(doi:10.1371/journal.pgen.1000742)
-
Domingo-Calap, P., Cuevas, J. M. & Sanjuán, R. 2009 The fitness effects of random mutations in single-stranded DNA and RNA bacteriophages. PLoS Genet. 5, el000742. (doi:10.1371/journal.pgen.1000742)
-
(2009)
PLoS Genet.
, vol.5
-
-
Domingo-Calap, P.1
Cuevas, J.M.2
Sanjuán, R.3
-
24
-
-
0033598717
-
Mutation rates among RNA viruses
-
(doi:10.1073/pnas.96.24.13910)
-
Drake, J. W. & Holland, J. J. 1999 Mutation rates among RNA viruses. Proc. Natl Acad. Sci. USA 96, 13 910-13 913. (doi:10.1073/pnas.96.24.13910)
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 13910-13913
-
-
Drake, J.W.1
Holland, J.J.2
-
25
-
-
0031916242
-
Rates of spontaneous mutation
-
Drake, J. W., Charlesworth, B., Charlesworth, D. & Crow, J. F. 1998 Rates of spontaneous mutation. Genetics 148, 1667-1686.
-
(1998)
Genetics
, vol.148
, pp. 1667-1686
-
-
Drake, J.W.1
Charlesworth, B.2
Charlesworth, D.3
Crow, J.F.4
-
26
-
-
0006654299
-
Molecular quasi-species
-
(doi:10.1021/j100335a010)
-
Eigen, M., McCaskill, J. & Schuster, P. 1988 Molecular quasi-species. J Phys. Chem. 92, 6881-6891. (doi:10.1021/j100335a010)
-
(1988)
J Phys. Chem.
, vol.92
, pp. 6881-6891
-
-
Eigen, M.1
McCaskill, J.2
Schuster, P.3
-
27
-
-
57049098631
-
The effect of genetic robustness on evolvability in digital organisms
-
(doi: 10.1186/1471-2148-8-284)
-
Elena, S. F. & Sanjuán, R. 2008 The effect of genetic robustness on evolvability in digital organisms. BMC Evol. Biol. 8, 284. (doi: 10.1186/1471-2148-8-284)
-
(2008)
BMC Evol. Biol.
, vol.8
, pp. 284
-
-
Elena, S.F.1
Sanjuán, R.2
-
28
-
-
0008983173
-
Distribution of fitness effects caused by random insertion mutations in
-
(doi:10.1023/A:1017031008316)
-
Elena, S. F., Ekunwe, L., Hajela, N., Oden, S. A. & Lenski, R. E. 1998 Distribution of fitness effects caused by random insertion mutations in Escherichia coli. Genetica 102/103, 349-358. (doi:10.1023/A:1017031008316)
-
(1998)
Escherichia Coli. Genetica
, vol.102-103
, pp. 349-358
-
-
Elena, S.F.1
Ekunwe, L.2
Hajela, N.3
Oden, S.A.4
Lenski, R.E.5
-
29
-
-
33645800999
-
Mechanisms of genetic robustness in RNA viruses
-
(doi:10.1038/sj.embor.7400636)
-
Elena, S. F., Carrasco, P., Daròs, J. A. & Sanjuán, R. 2006 Mechanisms of genetic robustness in RNA viruses. EMBO Rep. 7, 168-173. (doi:10.1038/sj.embor.7400636)
-
(2006)
EMBO Rep.
, vol.7
, pp. 168-173
-
-
Elena, S.F.1
Carrasco, P.2
Daròs, J.A.3
Sanjuán, R.4
-
30
-
-
34447546660
-
The distribution of fitness effects of new mutations
-
(doi:10.1038/nrg2146)
-
Eyre-Walker, A. & Keightley, P. D. 2007 The distribution of fitness effects of new mutations. Nat. Rev. Genet. 8, 610-618. (doi:10.1038/nrg2146)
-
(2007)
Nat. Rev. Genet.
, vol.8
, pp. 610-618
-
-
Eyre-Walker, A.1
Keightley, P.D.2
-
31
-
-
34250749323
-
High frequency of mutations that expand the host range of an RNA virus
-
(doi:10.1534/genetics.106.064634)
-
Ferris, M. T., Joyce, P. & Burch, C. L. 2007 High frequency of mutations that expand the host range of an RNA virus. Genetics 176, 1013-1022. (doi:10.1534/genetics.106.064634)
-
(2007)
Genetics
, vol.176
, pp. 1013-1022
-
-
Ferris, M.T.1
Joyce, P.2
Burch, C.L.3
-
32
-
-
42449117498
-
Maladaptation and the paradox of robustness in evolution
-
(doi:10.1371/journal.pone.0001021)
-
Frank, S. A. 2007 Maladaptation and the paradox of robustness in evolution. PLoS ONE 2, e1021. (doi:10.1371/journal.pone.0001021)
-
(2007)
PLoS ONE
, vol.2
-
-
Frank, S.A.1
-
33
-
-
22544478419
-
The cost of replication fidelity in an RNA virus
-
(doi:10.1073/pnas.0501062102)
-
Furió, V., Moya, A. & Sanjuán, R. 2005 The cost of replication fidelity in an RNA virus. Proc. Natl Acad. Sci. USA 102, 10 233-10237. (doi:10.1073/pnas.0501062102)
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 10233-10237
-
-
Furió, V.1
Moya, A.2
Sanjuán, R.3
-
34
-
-
0018029597
-
The accumulation of deleterious genes in a population: Muller's ratchet
-
(doi:10.1016/0040-5809(78)90027-8)
-
Haigh, J. 1978 The accumulation of deleterious genes in a population: Muller's ratchet. Theor. Popul. Biol. 14, 251-267. (doi:10.1016/0040-5809(78) 90027-8)
-
(1978)
Theor. Popul. Biol.
, vol.14
, pp. 251-267
-
-
Haigh, J.1
-
35
-
-
0001400708
-
The effect of variation on fitness
-
(doi: 10.1086/280722)
-
Haldane, J. B. S. 1937 The effect of variation on fitness. Am. Nat. 71, 337-349. (doi: 10.1086/280722)
-
(1937)
Am. Nat.
, vol.71
, pp. 337-349
-
-
Haldane, J.B.S.1
-
36
-
-
0345059165
-
Error thresholds and the constraints to RNA virus evolution
-
(doi:10.1016/j.tim.2003.10.006)
-
Holmes, E. C. 2003 Error thresholds and the constraints to RNA virus evolution. Trends Microbiol. 11, 543-546. (doi:10.1016/j.tim.2003.10.006)
-
(2003)
Trends Microbiol.
, vol.11
, pp. 543-546
-
-
Holmes, E.C.1
-
38
-
-
0036741701
-
The effect of deleterious alleles on adaptation in asexual populations
-
Johnson, T. & Barton, N. H. 2002 The effect of deleterious alleles on adaptation in asexual populations. Genetics 162, 395-411.
-
(2002)
Genetics
, vol.162
, pp. 395-411
-
-
Johnson, T.1
Barton, N.H.2
-
39
-
-
34547684827
-
Rate of adaptive peak shifts with partial genetic robustness
-
(doi:10.1111/j.1558-5646.2007.00166.X)
-
Kim, Y. 2007 Rate of adaptive peak shifts with partial genetic robustness. Evolution 61, 1847-1856. (doi:10.1111/j.1558-5646.2007.00166.X)
-
(2007)
Evolution
, vol.61
, pp. 1847-1856
-
-
Kim, Y.1
-
41
-
-
33845487715
-
Balancing robustness and evolvability
-
(doi: 10.1371/journal.pbio.0040428)
-
Lenski, R. E., Barrick, J. E. & Ofria, C. 2006 Balancing robustness and evolvability. PLoS Biol. 4, e428. (doi: 10.1371/journal.pbio.0040428)
-
(2006)
PLoS Biol.
, vol.4
-
-
Lenski, R.E.1
Barrick, J.E.2
Ofria, C.3
-
42
-
-
0036961512
-
The rate and character of spontaneous mutation in an RNA virus
-
Malpica, J. M., Fraile, A., Moreno, I., Obies, C. I., Drake, J. W & García-Arenal, F. 2002 The rate and character of spontaneous mutation in an RNA virus. Genetics 162, 1505-1511.
-
(2002)
Genetics
, vol.162
, pp. 1505-1511
-
-
Malpica, J.M.1
Fraile, A.2
Moreno, I.3
Obies, C.I.4
Drake, J.W.5
García-Arenal, F.6
-
43
-
-
50049135016
-
Robustness promotes evolvability of thermotolerance in an RNA virus
-
(doi:10.1186/1471-2148-8-231)
-
McBride, R. C., Ogbunugafor, C. B. & Turner, P. E. 2008 Robustness promotes evolvability of thermotolerance in an RNA virus. BMC Evol. Biol. 8, 231. (doi:10.1186/1471-2148-8-231)
-
(2008)
BMC Evol. Biol.
, vol.8
, pp. 231
-
-
McBride, R.C.1
Ogbunugafor, C.B.2
Turner, P.E.3
-
44
-
-
1542802459
-
Our load of mutations
-
Muller, H. J. 1950 Our load of mutations. Am. J. Hum. Genet 2, 111-176.
-
(1950)
Am. J. Hum. Genet
, vol.2
, pp. 111-176
-
-
Muller, H.J.1
-
45
-
-
50549201557
-
The relation of recombination to mutational advance
-
(doi:10.1016/0027-5107(64)90047-8)
-
Muller, H. J. 1964 The relation of recombination to mutational advance. Mutat Res. 1, 2-9. (doi:10.1016/0027-5107(64)90047-8)
-
(1964)
Mutat Res.
, vol.1
, pp. 2-9
-
-
Muller, H.J.1
-
46
-
-
0027020232
-
The nearly neutral theory of molecular evolution
-
(doi:10.1146/annurev.es.23.110192.001403)
-
Ohta, T. 1992 The nearly neutral theory of molecular evolution. Annu. Rev. Ecol. Syst. 23, 263-286. (doi:10.1146/annurev.es.23.110192.001403)
-
(1992)
Annu. Rev. Ecol. Syst.
, vol.23
, pp. 263-286
-
-
Ohta, T.1
-
47
-
-
0342657165
-
The rate of adaptation in asexuals
-
Orr, H. A. 2000 The rate of adaptation in asexuals. Genetics 155, 961-968.
-
(2000)
Genetics
, vol.155
, pp. 961-968
-
-
Orr, H.A.1
-
48
-
-
84974641341
-
-
Distribution of fitness effects caused by single-nucleotide substitutions in a DNA virus
-
Peris, J. B., Davis, P., Cuevas, J. M., Nebot, M. R. & Sanjuán, R. In preparation. Distribution of fitness effects caused by single-nucleotide substitutions in a DNA virus.
-
Preparation.
-
-
Peris, J.B.1
Davis, P.2
Cuevas, J.M.3
Nebot, M.R.4
Sanjuán, R.5
-
49
-
-
33746802359
-
Insights into the selective pressures restricting Pelargonium flower break virus genome variability: Evidence for host adaptation
-
(doi:10.1128/JVI.00603-06)
-
Rico, P., Ivars, P., Elena, S. F. & Hernández, C. 2006 Insights into the selective pressures restricting Pelargonium flower break virus genome variability: evidence for host adaptation. J. Virol. 80, 8124-8132. (doi:10.1128/JVI.00603-06)
-
(2006)
J. Virol.
, vol.80
, pp. 8124-8132
-
-
Rico, P.1
Ivars, P.2
Elena, S.F.3
Hernández, C.4
-
50
-
-
16844369125
-
An empirical test of the mutational landscape model of adaptation using a single-stranded DNA virus
-
(doi:10.1038/ng1535)
-
Rokyta, D. R., Joyce, P., Caudle, S. B. & Wichman, H. A. 2005 An empirical test of the mutational landscape model of adaptation using a single-stranded DNA virus. Nat. Genet. 37, 441-444. (doi:10.1038/ng1535)
-
(2005)
Nat. Genet.
, vol.37
, pp. 441-444
-
-
Rokyta, D.R.1
Joyce, P.2
Caudle, S.B.3
Wichman, H.A.4
-
51
-
-
54349092997
-
Beneficial fitness effects are not exponential for two viruses
-
(doi:10.1007/s00239-008-9153-x)
-
Rokyta, D. R., Beisel, C. J., Joyce, P., Ferris, M. T., Burch, C. L. & Wichman, H. A. 2008 Beneficial fitness effects are not exponential for two viruses. J. Mol. Evol. 67, 368-376. (doi:10.1007/s00239-008-9153-x)
-
(2008)
J. Mol. Evol.
, vol.67
, pp. 368-376
-
-
Rokyta, D.R.1
Beisel, C.J.2
Joyce, P.3
Ferris, M.T.4
Burch, C.L.5
Wichman, H.A.6
-
52
-
-
33749242962
-
Epistasis correlates to genomic complexity
-
(doi:10.1073/pnas.0604543103)
-
Sanjuán, R. & Elena, S. F. 2006 Epistasis correlates to genomic complexity. Proc. Natl Acad. Sci. USA 103, 14 402-14 405. (doi:10.1073/pnas.0604543103)
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 14402-14405
-
-
Sanjuán, R.1
Elena, S.F.2
-
53
-
-
50549091013
-
A network model for the correlation between epistasis and genomic complexity
-
(doi:10.1371/journal.pone.0002663)
-
Sanjuán, R. & Nebot, M. R. 2008 A network model for the correlation between epistasis and genomic complexity. PLoS ONE 3, e2663. (doi:10.1371/journal.pone.0002663)
-
(2008)
PLoS ONE
, vol.3
-
-
Sanjuán, R.1
Nebot, M.R.2
-
54
-
-
2942565781
-
The distribution of fitness effects caused by single-nucleotide substitutions in an RNA virus
-
(doi:10.1073/pnas.0400146101)
-
Sanjuán, R., Moya, A. & Elena, S. F. 2004a The distribution of fitness effects caused by single-nucleotide substitutions in an RNA virus. Proc. Natl Acad. Sci. USA 101, 8396-8401. (doi:10.1073/pnas.0400146101)
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 8396-8401
-
-
Sanjuán, R.1
Moya, A.2
Elena, S.F.3
-
55
-
-
7444221704
-
The contribution of epistasis to the architecture of fitness in an RNA virus
-
(doi:10.1073/pnas.0404125101)
-
Sanjuán, R., Moya, A. & Elena, S. F. 2004b The contribution of epistasis to the architecture of fitness in an RNA virus. Proc. Natl Acad Sci. USA 101, 15 376-15 379. (doi:10.1073/pnas.0404125101)
-
(2004)
Proc. Natl Acad Sci. USA
, vol.101
, pp. 15376-15379
-
-
Sanjuán, R.1
Moya, A.2
Elena, S.F.3
-
56
-
-
0016220238
-
The hitch-hiking effect of a favourable gene
-
(doi:10.1017/S0016672300014634)
-
Smith, J. M. & Haigh, J. 1974 The hitch-hiking effect of a favourable gene. Genet. Res. 23, 23-35. (doi:10.1017/S0016672300014634)
-
(1974)
Genet. Res.
, vol.23
, pp. 23-35
-
-
Smith, J.M.1
Haigh, J.2
-
57
-
-
74249123371
-
Evolution at a high imposed mutation rate: Adaptation obscures the load in phage T7
-
(doi:10.1534/genetics.109.108803)
-
Springman, R., Keller, T., Molineux, I. & Bull, J. J. 2009 Evolution at a high imposed mutation rate: adaptation obscures the load in phage T7. Genetics 184, 221-232. (doi:10.1534/genetics.109.108803)
-
(2009)
Genetics
, vol.184
, pp. 221-232
-
-
Springman, R.1
Keller, T.2
Molineux, I.3
Bull, J.J.4
-
58
-
-
33745267732
-
Effects of random mutations in the human immunodeficiency virus type 1 transcriptional promoter on viral fitness in different host cell environments
-
(doi:10.1128/JVI.02547-05)
-
van Opijnen, T., Boerlijst, M. C. & Berkhout, B. 2006 Effects of random mutations in the human immunodeficiency virus type 1 transcriptional promoter on viral fitness in different host cell environments. J. Virol. 80, 6678-6685. (doi:10.1128/JVI.02547-05)
-
(2006)
J. Virol.
, vol.80
, pp. 6678-6685
-
-
Van Opijnen, T.1
Boerlijst, M.C.2
Berkhout, B.3
-
60
-
-
36348992094
-
Robustness and evolvability: A paradox resolved
-
(doi:10.1098/rspb.2007.1137)
-
Wagner, A. 2008 Robustness and evolvability: a paradox resolved. Proc. R. Soc. B 275, 91-100. (doi:10.1098/rspb.2007.1137)
-
(2008)
Proc. R. Soc. B
, vol.275
, pp. 91-100
-
-
Wagner, A.1
-
61
-
-
0033575348
-
Different trajectories of parallel evolution during viral adaptation
-
doi:10.1126/science.285.5426.422
-
Wichman, H. A., Badgett, M. R., Scott, L. A., Boulianne, C. M. & Bull, J. J. 1999 Different trajectories of parallel evolution during viral adaptation. Science 285, 422-424. (doi:10.1126/science.285.5426.422)
-
(1999)
Science
, vol.285
, pp. 422-424
-
-
Wichman, H.A.1
Badgett, M.R.2
Scott, L.A.3
Boulianne, C.M.4
Bull, J.J.5
-
62
-
-
0034919014
-
Interaction between directional epistasis and average mutational effects
-
(doi:10.1098/rspb.2001.1690)
-
Wilke, C. O. & Adami, C. 2001 Interaction between directional epistasis and average mutational effects. Proc. R. Soc. Lond. B 268, 1469-1474. (doi:10.1098/rspb.2001.1690)
-
(2001)
Proc. R. Soc. Lond. B
, vol.268
, pp. 1469-1474
-
-
Wilke, C.O.1
Adami, C.2
|