Do male and female black-backed woodpeckers respond differently to gaps in habitat?

Evolutionary Applications

Volumn 3, Issue 3, 2010, Pages 263-278

  Pierson, Jennifer C ^a   Allendorf, Fred W ^b   Saab, Victoria ^c   Drapeau, Pierre ^d   Schwartz, Michael K ^c  

^a UNIVERSITY OF MONTANA   (United States)

^b UNIVERSITY OF MONTANA   (United States)

^c ROCKY MOUNTAIN RESEARCH STATION   (United States)

^d UNIVERSITÉ DU QUÉBEC À MONTRÉAL   (Canada)

Author keywords

Microsatellite; Movement barriers; MtDNA; Picoides arcticus; Population genetic structure; Sex biased movement

Indexed keywords

EID: 77954296909     PISSN: 17524563     EISSN: 17524571     Source Type: Journal    
DOI: 10.1111/j.1752-4571.2009.00111.x     Document Type: Article

References (86)

1. Allendorf F W, Luikart G. Conservation and the genetics of populations 2007, Blackwell Publishing, Malden
2. Avise J C. Molecular markers, natural history and evolution 2004, 2nd edn, Sinauer Associates, Inc., Sunderland
3. Bakker V J, Van Vuren D H. Gap-crossing decisions by the red squirrel, a forest-dependent small mammal. Conservation Biology 2004, 18:689-697.
4. Ball J, Avise J C. Mitochondrial DNA phylogeographic differentiation among avian populations and the evolutionary significance of subspecies. The Auk 1992, 109:626-636.
5. Bélisle M, St Clair C C. Cumulative effects of barriers on the movement of forest birds. Conservation Ecology 2001, 5:9.
6. Bélisle M, Desrochers A. Gap-crossing decisions by forest birds: an empirical basis for parameterizing spatially-explicit, individual-based models. Landscape Ecology 2002, 17:219-231.
7. Bouzat J L, Johnson K. Genetic structure among closely spaced leks in a peripheral population of lesser prairie-chickens. Molecular Ecology 2004, 13:499-505.
8. Brito P H. Contrasting patterns of mitochondrial and microsatellite genetic structure among Western European populations of tawny owls (Strix aluco). Molecular Ecology 2007, 16:3423-3437.
9. Brownstein M, Carpten D, Smith J R. Modulation of non-templated nucleotide addition by Taq DNA polymerase: primer modifications that facilitates genotyping. BioTechniques 1996, 20:1004-1010.
10. Caton E L. Effects of fire and salvage logging on the cavity nesting bird community in Northwestern Montana 1996, Ph.D. Thesis, University of Montana, Missoula
11. Chapuis M P, Estoup A. Microsatellite null alleles and estimation of population differentiation. Molecular Biology and Evolution 2007, 24:621-631.
12. Chen C, Durand E, Forbes F, François O. Bayesian clustering algorithms ascertaining spatial population structure: a new computer program and a comparison study. Molecular Ecology Notes 2007, 7:747-756.
13. Clarke A L, Sæther B E, Røskaft E. Sex biases in avian dispersal: a reappraisal. Oikos 1997, 79:429-438.
14. Clobert J, Danchin E, Dhondt A, Nichols J D. Dispersal 2001, Oxford University Press, New York
15. Dale S, Steifetten O, Osiejuk T S, Losak K, Cygan J P. How do birds search for breeding areas at the landscape level? Interpatch movements of male ortolan buntings. Ecography 2006, 29:886-898.
16. Daniels S J, Walters J R. Inbreeding depression and its effects on natal dispersal in red-cockaded woodpeckers. The Condor 2000, 102:482-491.
17. Desrochers A, Hannon S J. Gap crossing decisions by forest songbirds during the post-fledging period. Conservation Biology 1997, 11:1204-1210.
18. Dixon R, Saab V. Black-backed woodpecker (Picoides arcticus). The Birds of North America 2000, 1-20. Poole A, Gill F. eds, No. 509, The Birds of North America, Inc., Philadelphia, PA
19. Dray S, Dufour A B, Chessel D. The ade4 package-II: two-table and K-table methods. R News 2007, 7:47-52.
20. Dudley J G, Saab V A. Home range size of black-backed woodpeckers in burned forests of southwestern Idaho. Western North American Naturalist 2007, 67:593-600.
21. Dupanloup I, Schneider S, Excoffier L. A simulated annealing approach to define the genetic structure of populations. Molecular Ecology 2002, 11:2571-2581.
22. Edwards S, Bensch S. Looking forwards or looking backwards in avian phylogeography? A comment on Zink and Barrowclough 2008. Molecular Ecology 2009, 18:2930-2933.
23. Ellegren H, Carlson A, Stenberg I. Genetic structure and variability of whitebacked woodpecker (Dendrocopos leucotos) populations in northern Europe. Hereditas 1999, 130:291-299.
24. Excoffier L, Laval G, Schneider S. Arlequin version 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 2005, 1:47-50.
25. Falush D, Stephens M, Pritchard J K. Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 2003, 164:1567-1587.
26. Frantz A C, Cellina S, Krier A, Schley L, Burke T. Using spatial Bayesian methods to determine the genetic structure of a continuously distributed population: clusters or isolation by distance? Journal of Applied Ecology 2009, 46:493-505.
27. Friesen V L, Burg T M, McCoy K D. Mechanisms of population differentiation in seabirds. Molecular Ecology 2007, 16:1765-1785.
28. Fu Y X. Statistical test of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 1997, 147:915-925.
29. Gascon C, Malcolm J R, Patton J L, Silva M N F D, Bogart J P, Lougheed S C, Peres C A. Riverine barriers and the geographic distribution of Amazonian species. Proceedings of the National Academy of Sciences of the United States of America 2000, 97:13672-13677.
30. Gay L, Defos D R P, Mondain-Monval J-Y, Crochet P A. Phylogeography of a game species: the red-crested pochard (Netta rufina) and consequences for its management. Molecular Ecology 2004, 13:1035-1045.
31. Gibbs H L, Dawson R J G, Hobson K A. Limited differentiation in microsatellite DNA variation among northern populations of the yellow warbler: evidence for male-biased gene flow? Molecular Ecology 2000, 9:2137-2147.
32. Gobeil J F, Villard M A. Permeability of three boreal forest landscape types to bird movements as determined from experimental translocations. Oikos 2002, 98:447-458.
33. Goudet J, Perrin N, Waser P. Tests for sex-biased dispersal using bi-parentally inherited genetic markers. Molecular Ecology 2002, 11:1103-1114.
34. Greenwood P. Mating systems, philopatry, and dispersal in birds and mammals. Animal Behaviour 1980, 28:1140-1162.
35. Greenwood P, Harvey P H. The natal and breeding dispersal of birds. Annual Review of Ecology and Systematics 1982, 13:1-21.
36. Guillot G, Estoup A, Mortier F, Cosson J F. A spatial statistical model for landscape genetics. Genetics 2005a, 170:1261-1280.
37. Guillot G, Mortier F, Estoup A. Geneland: a program for landscape genetics. Molecular Ecology Notes 2005b, 5:712-715.
38. Guillot G, Santos F, Estoup A. Analysing georeferenced population genetics data with Geneland: a new algorithm to deal with null alleles and a friendly graphical user interface. Bioinformatics 2008, 24:1406-1407.
39. Hannon S J, Mumme R L, Koenig W D, Pitelka F A. Replacement of breeders and within-group conflict in the cooperatively breeding acorn woodpecker. Behavioral Ecology and Sociobiology 1985, 17:303-312.
40. Harris R J, Reed J M. Behavioral barriers to non-migratory movements of birds. Annales Zoologici Fennici 2002, 39:275-290.
41. Hedrick P W. Perspective: highly variable loci and their interpretation in evolution and conservation. Evolution 1999, 53:313-318.
42. Hedrick P W. A standardized genetic differentiation measure. Evolution 2005, 59:1633-1638.
43. Helbig A J, Salomon M, Bensch S, Seibold I. Male-biased gene flow across an avian hybrid zone: evidence from mitochondrial and microsatellite DNA. Journal of Evolutionary Biology 2001, 14:277-287.
44. Hewitt G. The genetic legacy of the Quaternary ice ages. Nature 2000, 405:907-913.
45. Huot M, Ibarzabal J. A comparison of the age-class structure of black-backed woodpeckers found in recently burned and unburned boreal coniferous forests in eastern Canada. Annales Zoologici Fennici 2006, 43:131-136.
46. Johnson J A, Burnham K K, Burnham W A, Mindell D P. Genetic structure among continental and island populations of gyrfalcons. Molecular Ecology 2007, 16:3145-3160.
47. Jones K L, Krapu G L, Brandt D A, Ashley M V. Population genetic structure in migratory sandhill cranes and the role of Pleistocene glaciations. Molecular Ecology 2005, 14:2645-2657.
48. Kocher T D, Thomas W K, Meyer A, Edwards S V, Paabo S, Villablanca F X, Wilson A C. Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proceedings of the National Academy of Sciences of the United States of America 1989, 86:6196-6200.
49. Lambin X, Aars J, Piertney S B. Dispersal, intraspecific competition, kin competition, and kin facilitation: a review of the empirical evidence. Dispersal 2001, Clobert J, Danchin E, Dhondt ANichols J. eds, Oxford University Press, New York
50. Latch E K, Dharmarajan G, Glaubitz J C, Rhodes O E J. Relative performance of Bayesian clustering software for inferring population substructure and individual assignment at low levels of population differentiation. Conservation Genetics 2006, 7:295-302.
51. Lecomte N, Gauthier G, Giroux J, Milot E, Bernatchez L. Tug of war between continental gene flow and rearing site philopatry in a migratory bird: the sex-biased dispersal paradigm reconsidered. Molecular Ecology 2009, 18:593-602.
52. Lewis P O, Zaykin D. Genetic data analysis: computer program for the analysis of allelic data. 2001, http://lewis.eeb.uconn.edu/lewishome/software.html, Version 1.0. (accessed June 2008)
53. Longmire J L, Lewis A K, Brown N C, Buckingham J M, Clark L M, Jones M D, Meincke L J. Isolation and molecular characterization of a highly polymorphic centromeric tandem repeat in the family Falconidae. Genomics 1988, 2:14-24.
54. Manel S, Schwartz M K, Luikart G, Taberlet P. Landscape genetics: combining landscape ecology and population genetics. Trends in Ecology & Evolution 2003, 18:189-197.
55. Mantel N. The detection of disease clustering and a generalized regression approach. Cancer Research 1967, 27:209-220.
56. Meirmans P G. Using the AMOVA framework to estimate a standardized genetic differentiation measure. Evolution 2006, 60:2399-2402.
57. Mikusiński G. Woodpeckers: distribution, conservation, and research in a global perspective. Annales Zoologici Fennici 2006, 43:86-95.
58. Mila B, Smith T B, Wayne R K. Speciation and rapid phenotypic differentiation in the yellow-rumped warbler (Dendroica coronata) complex. Molecular Ecology 2007, 16:159-173.
59. Milot E, Gibbs H L, Hobson K A. Phylogeography and genetic structure of northern populations of the yellow warbler (Dendroica petechia). Molecular Ecology 2000, 9:667-681.
60. Morales J M, Ellner S P. Scaling up animal movements in heterogeneous landscapes: the importance of behavior. Ecology 2002, 83:2240-2247.
61. Paradis E, Baillie S R, Sutherland W J, Gregory R D. Patterns of natal and breeding dispersal in birds. Journal of Animal Ecology 1998, 67:518-536.
62. Pasinelli G. Population biology of European woodpecker species: a review. Annales Zoologici Fennici 2006, 43:96-111.
63. Perrin N, Goudet J. In: Inbreeding, kinship, and the evolution of natal dispersal. Dispersal 2001, Clobert J, Danchin EDhondt ANichols J. eds, Oxford University Press, New York
64. Piertney S B, Marquiss M, Summers R. Characterization of tetranucleotide microsatellite markers in the Scottish crossbill (Loxia scotica). Molecular Ecology 1998, 7:1247-1263.
65. Pritchard J K, Stephens M, Donnelly P. Inference of population structure using multilocus genotype data. Genetics 2000, 155:945-959.
66. Prugnolle F, de Meeus T. Inferring sex-biased dispersal from population genetic tools: a review. Heredity 2002, 88:161-165.
67. Raymond M, Rousset F. GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. Journal of Heredity 1995, 86:248-249.
68. Rice W R. Analyzing tables of statistical tests. Evolution 1989, 43:223-225.
69. Rodríguez A, Andrén H, Jansson G. Habitat-mediated predation risk and decision making of small birds at forest edges. Oikos 2001, 95:383-396.
70. Rozas J, Sanchez-Delbarrio J C, Messeguer X, Rozas R. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 2003, 19:2496-2497.
71. Russell R E, Swihart R K, Feng Z. Population consequences of movement decisions in a patchy landscape. Oikos 2003, 103:142-152.
72. Saab V A, Russell R E, Dudley J G. Nest densities of cavity-nesting birds in relation to postfire salvage logging and time since wildfire. Condor 2007, 109:97-108.
73. Saab V A, Russell R E, Dudley J G. Nest-site selection by cavity-nesting birds in relation to postfire salvage logging. Forest Ecology and Management 2009, 257:151-159.
74. Schwartz M K, McKelvey K. Why sampling scheme matters: the effect of sampling scheme on landscape genetic results. Conservation Genetics 2009, 10:441-452.
75. St Clair C C, Bélisle M, Desrochers A, Hannon S. Winter responses of forest birds to habitat corridors and gaps. Conservation Ecology 1998, 2:13.
76. Tajima F. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 1989, 123:585-595.
77. Tiedemann R, Paulus K B, Scheer M, Von Kistowski K G, Skírnisson K, Bloch D, Dam M. Mitochondrial DNA and microsatellite variation in the eider duck (Somateria mollissima) indicate stepwise postglacial colonization of Europe and limited current long-distance dispersal. Molecular Ecology 2004, 13:1481-1494.
78. Van Oosterhout C, Hutchinson W F, Wills D P M, Shipley P. MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Molecular Ecology Notes 2004, 4:535-538.
79. Vila M, Robles H, Ciudad C, Olea P P, Baglione V. Isolation and characterization of 12 microsatellite markers in the middle-spotted woodpecker (Dendrocopos medius). Molecular Ecology Resources 2008, 8:415-417.
80. Weir B S, Cockerham C C. Estimating F-statistics for the analysis of population structure. Evolution 1984, 38:1358-1370.
81. Winkler H, Christie D A, Nurney D. A guide to the woodpeckers of the world 1995, Houghton Mifflin Company, New York
82. With K A, Gardner R H, Turner M G. Landscape connectivity and population distributions in heterogeneous environments. Oikos 1997, 78:151-169.
83. Wright T F, Rodriquez A M, Fleischer R C. Vocal dialects, sex-biased dispersal, and microsatellite population structure in the parrot Amazona auropalliata. Molecular Ecology 2005, 13:1197-1205.
84. Yunick R P. A review of recent irruptions of the black-backed woodpecker and the three-toed woodpecker in eastern North America. Journal of Field Ornithology 1985, 56:138-152.
85. Zink R M, Barrowclough G F. Mitochondrial DNA under siege in avian phylogeography. Molecular Ecology 2008, 17:2107-2121.
86. Zollner P A, Lima S L. Behavioral tradeoffs when dispersing across a patchy landscape. Oikos 2005, 108:219-230.