Vertebrate retina and hypothalamus development

Wiley Interdisciplinary Reviews: Systems Biology and Medicine

Volumn 1, Issue 3, 2009, Pages 380-389

  Byerly, Mardi S ^a   Blackshaw, Seth ^a  

^a JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

VERTEBRATA;

ANIMAL; BIOLOGICAL MODEL; GENE EXPRESSION PROFILING; GROWTH, DEVELOPMENT AND AGING; HYPOTHALAMUS; MOUSE; PHYSIOLOGY; PRENATAL DEVELOPMENT; RETINA; REVIEW; SYSTEMS BIOLOGY; VERTEBRATE;

ANIMALS; GENE EXPRESSION PROFILING; HYPOTHALAMUS; MICE; MODELS, NEUROLOGICAL; RETINA; SYSTEMS BIOLOGY; VERTEBRATES;

EID: 77953810460     PISSN: 19395094     EISSN: 1939005X     Source Type: Journal    
DOI: 10.1002/wsbm.22     Document Type: Article

References (61)

1. Briscoe J, Pierani A, Jessell TM, Ericson J. The style of this book demands that 'et al' follows the names of atleast three authors. Only two names have been provided for this reference. Please provide one more name for the same. A homeodomain protein code specifies progenitor cell identity and neuronal fate in the ventral neural tube. Cell 2000, 101:435-445.
2. Zuber M, HarrisW. Formation of the eye field. In: Sernagor E, et al. Eds. Retinal Development. New York, Cambridge University Press; 2006, 8-29.
3. Chiang C, Litingtung Y, Lee E, Young KE, Corden JL, Westphal H, Beachy PA. Cyclopia and defective axial patterning in mice lacking sonic hedgehog gene function. Nature 1996, 383:407-413.
4. Jeffery WR. Emerging model systems in evo-devo: cavefish and microevolution of development. Evol Dev 2008, 10:265-272.
5. Krieg WJS. The hypothalamus of the albino rat. J Comp Neurol 1932, 55:19-89.
6. Lee JE, Wu SF, Goering LM, Dorsky RI. CanonicalWnt signaling through Lef1 is required for hypothalamic neurogenesis. Development 2006, 133:4451-4461.
7. Manning L, Ohyama K, Saeger B, Hatano O, Wilson SA, Logan M, Placzek M. Regional morphogenesis in the hypothalamus: a BMP-Tbx2 pathway coordinates fate and proliferation through Shh downregulation. Dev Cell 2006, 11:873-885.
8. McCarthy M, Turnbull DH, Walsh CA, Fishell G. Telencephalic neural progenitors appear to be restricted to regional and glial fates before the onset of neurogenesis. J Neurosci 2001, 21:6772-6781.
9. Vigh B, Manzano MJ, Zadori A, Frank O, Lukats A, et al. Nonvisual photoreceptors of the deep brain, pineal organs and retina. Histol Histopathol 2002, 17:555-590.
10. Miyata S,Hatton GI. Activity-related, dynamic neuronglial interactions in the hypothalamo-neurohypophysial system. Microsc Res Tech 2002, 56:143-157.
11. Jeon CJ, Strettoi E, Masland RH. The major cell populations of the mouse retina. J Neurosci 1998, 18:8936-8946.
12. Cepko CL, Austin CP, Yang X, AlexiadesM, Ezzeddine D. Cell fate determination in the vertebrate retina. Proc Natl Acad Sci U S A 1996, 93:589-595.
13. Belliveau MJ, Cepko CL. Extrinsic and intrinsic factors control the genesis of amacrine and cone cells in the rat retina. Development 1999, 126:555-566.
14. Rapaport DH, Patheal SL, Harris WA. Cellular competence plays a role in photoreceptor differentiation in the developing Xenopus retina. J Neurobiol 2001, 49:129-141.
15. Cayouette M, Barres BA, Raff M. Importance of intrinsic mechanisms in cell fate decisions in the developing rat retina. Neuron 2003, 40:897-904.
16. Turner DL, Snyder EY, Cepko CL. Lineageindependent determination of cell type in the embryonic mouse retina. Neuron 1990, 4:833-845.
17. Wang Y, Dakubo GD, Thurig S, Mazerolle CJ, Wallace VA. Retinal ganglion cell-derived sonic hedgehog locally controls proliferation and the timing of RGC development in the embryonic mouse retina. Development 2005, 132:5103-5113.
18. Burmeister M, Novak J, Liang MY, Basu S, Ploder L, Hawes NL, Vidgen D, Hoover F, Goldman D, Kalnins VI, et al. Ocular retardation mouse caused by Chx10 homeobox null allele: impaired retinal progenitor proliferation and bipolar cell differentiation. Nat Genet 1996, 12:376-384.
19. Marquardt T, Ashery-Padan R, Andrejewski N, Scardigli R, Guillemot F, Gruss P. Pax6 is required for the multipotent state of retinal progenitor cells. Cell 2001, 105:43-55.
20. Mathers PH, Grinberg A, Mahon KA, Jamrich M. The Rx homeobox gene is essential for vertebrate eye development. Nature 1997, 387:603-607.
21. Lagutin OV, Zhu CC, Kobayashi D, Topczewski J, Shimamura K, Puelles L, Russell HR, McKinnon PJ, Solnica-Krezel L, Oliver G. Six3 repression of Wnt signaling in the anterior neuroectoderm is essential for vertebrate forebrain development. Genes Dev 2003, 17:368-379.
22. Michaud JL, Rosenquist T, May NR, Fan CM. Development of neuroendocrine lineages requires the bHLHPAS transcription factor SIM1. Genes Dev 1998, 12:3264-3275.
23. Hosoya T, Oda Y, Takahashi S, Morita M, Kawauchi S, Ema M, Yamamoto M, Fujii-Kuriyama Y. Defective development of secretory neurones in the hypothalamus of Arnt2-knockout mice. Genes Cells 2001, 6:361-374.
24. Michaud JL, DeRossi C, May NR, Holdener BC, Fan CM. ARNT2 acts as the dimerization partner of SIM1 for the development of the hypothalamus. Mech Dev 2000, 90:253-261.
25. Acampora D, Postiglione MP, Avantaggiato V, Di Bonito M, Vaccarino FM, Michaud J, Simeone A. Progressive impairment of developing neuroendocrine cell lineages in the hypothalamus of mice lacking the Orthopedia gene. Genes Dev 1999, 13:2787-2800.
26. Lavado A, Lagutin OV, Oliver G. Six3 inactivation causes progressive caudalization and aberrant patterning of the mammalian diencephalon. Development 2008, 135:441-450.
27. Brown NL, Patel S, Brzezinski J, Glaser T. Math5 is required for retinal ganglion cell and optic nerve formation. Development 2001, 128:2497-2508.
28. Mears AJ, Kondo M, Swain PK, Takada Y, Bush RA, Saunders TL, Sieving PA, Swaroop A. Nrl is required for rod photoreceptor development. Nat Genet 2001, 29:447-452.
29. Haider NB, Jacobson SG, Cideciyan AV, Swiderski R, Streb LM, Searby C, Beck G, Hockey R, Hanna DB, Gorman S and others. Mutation of a nuclear receptor gene, NR2E3, causes enhanced S cone syndrome, a disorder of retinal cell fate. Nat Genet 2000, 24:127-131.
30. Qiu F, Jiang H, Xiang M. A comprehensive negative regulatory program controlled by Brn3b to ensure ganglion cell specification from multipotential retinal precursors. J Neurosci 2008, 28:3392-3403.
31. Schonemann MD, Ryan AK, McEvilly RJ, O'Connell SM, Arias CA, Kalla KA, Li P, Sawchenko PE, Rosenfeld MG. Development and survival of the endocrine hypothalamus and posterior pituitary gland requires the neuronal POU domain factor Brn-2. Genes Dev 1995, 9:3122-3135.
32. de Melo J, Zhou QP, Zhang Q, Zhang S, Fonseca M, Wigle JT, Eisenstat DD. Dlx2 homeobox gene transcriptional regulation of Trkb neurotrophin receptor expression during mouse retinal development. Nucleic Acids Res 2008, 36:872-884.
33. Furukawa T, Morrow EM, Li T, Davis FC, Cepko CL. Retinopathy and attenuated circadian entrainment in Crx-deficient mice. Nat Genet 1999, 23:466-470.
34. Morrow EM, Furukawa T, Lee JE, Cepko CL. NeuroD regulates multiple functions in the developing neural retina in rodent. Development 1999, 126:23-36.
35. Tran PV, Lee MB,Marin O, Xu B, Jones KR, Reichardt LF, Rubenstein JR, Ingraham HA. Requirement of the orphan nuclear receptor SF-1 in terminal differentiation of ventromedial hypothalamic neurons. Mol Cell Neurosci 2003, 22:441-453.
36. Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH and others. Genomic analysis ofmouse retinal development. PLoS Biol 2004, 2:E247.
37. Blackshaw S, Fraioli RE, Furukawa T, Cepko CL. Comprehensive analysis of photoreceptor gene expression and the identification of candidate retinal disease genes. Cell 2001, 107:579-589.
38. Corbo JC, Myers CA, Lawrence KA, Jadhav AP, Cepko CL. A typology of photoreceptor gene expression patterns in the mouse. Proc Natl Acad Sci U S A 2007, 104:12069-12074.
39. Akimoto M, Cheng H, Zhu D, Brzezinski JA, Khanna R, Filippova E, Oh EC, Jing Y, Linares JL, Brooks M and others. Targeting of GFP to newborn rods by Nrl promoter and temporal expression profiling of flowsorted photoreceptors. Proc Natl Acad Sci U S A 2006, 103:3890-3895.
40. Kim DS, Ross SE, Trimarchi JM, Aach J, Greenberg ME, Cepko CL. Identification of molecular markers of bipolar cells in the murine retina. J CompNeurol 2008, 507:1795-1810.
41. Trimarchi JM, Stadler MB, Roska B, Billings N, Sun B, Bartch B, Cepko CL. Molecular heterogeneity of developing retinal ganglion and amacrine cells revealed through single cell gene expression profiling. J Comp Neurol 2007, 502:1047-1065.
42. Roesch K, Jadhav AP, Trimarchi JM, Stadler MB, Roska B, Sun BB, Cepko CL. The transcriptome of retinal muller glial cells. J Comp Neurol 2008, 509:225-238.
43. Kurrasch DM, Cheung CC, Lee FY, Tran PV, Hata K, Ingraham HA. The neonatal ventromedial hypothalamus transcriptome reveals novel markers with spatially distinct patterning. J Neurosci 2007, 27:13624-13634.
44. Caqueret A, Boucher F, Michaud JL. Laminar organization of the early developing anterior hypothalamus. Dev Biol 2006, 298:95-106.
45. Bentley DR. Whole-genome re-sequencing. Curr Opin Genet Dev 2006, 16:545-552.
46. Zhang F, Aravanis AM, Adamantidis A, de Lecea L, Deisseroth K. Circuit-breakers: optical technologies for probing neural signals and systems. Nat Rev Neurosci 2007, 8:577-581.
47. Scearce-Levie K, Coward P, Redfern CH, Conklin BR. Engineering receptors activated solely by synthetic ligands (RASSLs). Trends Pharmacol Sci 2001, 22:414-420.
48. Liang F, Matrubutham U, Parvizi B, Yen J, Duan D, Mirchandani J, Hashima S, Nguyen U, Ubil E, Loewenheim J and others. ORFDB: an information resource linking scientific content to a high-quality open reading frame (ORF) collection. Nucleic Acids Res 2004, 32:D595-D599.
49. Moffat J, Grueneberg DA, Yang X, Kim SY, Kloepfer AM, Hinkle G, Piqani B, Eisenhaure TM, Luo B, Grenier JK and others. A lentiviral RNAi library for human and mouse genes applied to an arrayed viral highcontent screen. Cell 2006, 124:1283-1298.
50. Silva JM, Li MZ, Chang K, Ge W, Golding MC, Rickles RJ, Siolas D, Hu G, Paddison PJ, Schlabach MR and others. Second-generation shRNA libraries covering the mouse and human genomes. Nat Genet 2005, 37:1281-1288.
51. Matsuda T, Cepko CL. Electroporation and RNA interference in the rodent retina in vivo and in vitro. Proc Natl Acad Sci U S A 2004, 101:16-22.
52. Ohyama K, Ellis P, Kimura S, Placzek M. Directed differentiation of neural cells to hypothalamic dopaminergic neurons. Development 2005, 132:5185-5197.
53. Osakada F, Ikeda H, Mandai M, Wataya T, Watanabe K, Yoshimura N, Akaike A, Sasai Y, Takahashi M. Toward the generation of rod and cone photoreceptors from mouse, monkey and human embryonic stem cells. Nat Biotechnol 2008, 26:215-224.
54. Levine EM, Green ES. Cell-intrinsic regulators of proliferation in vertebrate retinal progenitors. Semin Cell Dev Biol 2004, 15:63-74.
55. Young RW. Cell differentiation in the retina of the mouse. Anat Rec 1985, 212:199-205.
56. Shimada M, Nakamura T. Time of neuron origin in mouse hypothalamic nuclei. Exp Neurol 1973, 41:163-173.
57. Donovan SL, Dyer MA. Regulation of proliferation during central nervous system development. Semin Cell Dev Biol 2005, 16:407-421.
58. Livesey FJ, Cepko CL. Vertebrate neural cell-fate determination: lessons from the retina. Nat Rev Neurosci 2001, 2:109-118.
59. Markakis EA. Development of the neuroendocrine hypothalamus. Front Neuroendocrinol 2002, 23:257-291.
60. Sernagor E, Eglen S, Harris WA, Wong RO. Retinal Development. Cambridge: Cambridge University Press; 2006.
61. Swanson LW. Brain Architecture: Understanding the Basic Plan. Oxford, UK: Oxford University Press; 2002.