Analysis of Helicobacter pylori genotypes in Afghani and Iranian isolates

Polish Journal of Microbiology

Volumn 59, Issue 1, 2010, Pages 61-66

  Dabiri, Hossein ^a,b   Bolfion, Mehdi ^a   Mirsalehian, Akbar ^b   Rezadehbashi, Maryam ^a   Jafari, Fereshteh ^a   Shokrzadeh, Leila ^a   Sahebekhtiari, Navid ^a   Zojaji, Homayon ^a   Yamaoka, Yoshio ^c   Mirsattari, Darioush ^a   Zali, Mohammad Reza ^a  

^a SHAHID BEHESHTI UNIVERSITY OF MEDICAL SCIENCES   (Iran)

^b TEHRAN UNIVERSITY OF MEDICAL SCIENCES   (Iran)

^c BAYLOR COLLEGE OF MEDICINE   (United States)

Author keywords

Afghani and Irani isolates of Helicobacter pylori; Clinical outcome; H. pylori genotypes; Virulence factors

Indexed keywords

BACTERIAL PROTEIN; CAGA PROTEIN; CAGE PROTEIN; UNCLASSIFIED DRUG; VACUOLATING TOXIN;

ADULT; AFGHANISTAN; ALLELE; ARTICLE; BACTERIUM ISOLATE; BLOOD CULTURE; COMPARATIVE STUDY; DNA EXTRACTION; FEMALE; GASTRITIS; GENOTYPE; GEOGRAPHICAL VARIATION (SPECIES); HELICOBACTER INFECTION; HELICOBACTER PYLORI; HUMAN; IRAN; MAJOR CLINICAL STUDY; MALE; NONHUMAN; PATIENT; PEPTIC ULCER; POLYMERASE CHAIN REACTION; PROMOTER REGION; PROSPECTIVE STUDY; STOMACH CANCER;

HELICOBACTER PYLORI;

EID: 77952801203     PISSN: 17331331     EISSN: None     Source Type: Journal    
DOI: 10.33073/pjm-2010-009     Document Type: Article

References (44)

1. Alborzi A., J. Soltani, B. Pourabbas, B. Oboodi, M. Haghighat, M. Hayati and M. Rashidi. 2006. Prevalence of Helicobacter pylori infection in children (south of Iran). Diagn. Microbiol. Infect. Dis. 54: 259-261.
2. Atherton J.C. 1997. The clinical relevance of strain types of Helicobacter pylori. Gut. 40: 701-703. (Pubitemid 27305459)
3. Atherton J.C., P. Cao, R.M. Peek, M.K.R. Tummuru, M.J. Blaser and T.L. Cover. 1995. Mosaicism in vacuolating cytotoxin alleles of Helicobacter pylori Association of specific vacA types with cytotoxin production and peptic ulceration. J. Biol. Chem. 270: 17771-117767
4. Blaser M.J. 1995. Intrastrain differences in Helicobacter pylori: a key question in mucosal damage? Ann Med. 27: 559-563.
5. Censini S., C. Lange, Z. Xiang, J.E. Crabtree, P. Ghiara, M. Borodovsky, R. Rappuoli and A. Covacci. 1996. Cag, a pathogenicity island of Helicobacter pylori, encodes type I-specific and disease-associated virulence factors. Proc. Natl. Acad. Sci. 93: 14648-14653.
6. Chattopadhyay S., S. Datta, A. Chowdhury, S. Chowdhury, A.K. Mukhopadhyay, K. Rajendran, S.K. Bhattacharya, D.E. Berg and C.B. Nair. 2002. Virulence genes in Helicobacter pylori strains from West Bengal residents with overt H. pyloriassociated disease and healthy volunteers. J. Clin. Microbiol. 40: 2622-2625.
7. Chomvarin C., W. Namwat, K. Chaicumpar, P. Mairiang, A. Sangchan, B. Sripa, S. Tor-Udom and R.K. Vilaichone. 2008. Prevalence of Helicobacter pylori vacA, cagA, cagE, iceA and babA2 genotypes in Thai dyspeptic patients. Int. J. Infect. Dis. 12: 30-36.
8. Covacci A., J.L. Telford, G. Del Giudice, J. Parsonnet and R. Rappuoli. 1999. Helicobacter pylori virulence and genetic geography. Science 284: 1328-1333. (Pubitemid 29289653)
9. Dabiri H., P. Maleknejad, Y. Yamaoka, MM. Feizabadi, F. Jafari, M. Rezadehbashi, FA. Nakhjavani, A. Mirsalehian, M.R. Zali. 2009. Distribution of Helicobacter pylori cagA, cagE, oipA and vacA in different major ethnic groups in Tehran, Iran. J. Gastroenterol Hepatol. 24: 1380-1386.
10. Datta S., S. Chattopadhyay, G.B. Nair, A.K. Mukhopadhyay, J. Hembram, D.E. Berg, D.R. Saha, A. Khan, A. Santra, S.K. Bhattacharya and other. 2003. Virulence genes and neutral DNA markers of Helicobacter pylori isolates from different ethnic communities of West Bengal, India. J. Clin. Microbiol. 41: 3737-3743. (Pubitemid 36994710)
11. Fallone C.A., R. Beech and A. Barkun. 1998. The H. pylori vacA S1 genotype and the cagE gene are associated with gastroduodenal disease. Gut. 43:19A.
12. Hussein N.R., M. Mohammadi, Y. Talebkhan, M. Doraghi, D.P. Letley, M.K. Muhammad, R.H. Argent and J.C. Atherton. 2008. Differences in virulence markers between Helicobacter pylori strains from Iraq and those from Iran: potential importance of regional differences in H. pylori-associated disease. J. Clin. Microbiol. 46: 1774-1779.
13. Jafarzadeh A., M.T. Rezayati and M. Nemati. 2007. Specific serum immunoglobulin G to H. pylori and CagA in healthy children and adults (south-east of Iran). World. J. Gastroenterol. 13: 3117-3121. (Pubitemid 47045472)
14. Kauser F., M.A. Hussain, I. Ahmed, N. Ahmad, A. Habeeb, A.A. Khan and N. Ahmed. 2005. Comparing genomes of Helicobacter pylori strains from the high-altitude desert of Ladakh, India. J. Clin. Microbiol. 43: 1538-1545.
15. Kauser F., M.A. Hussain, I. Ahmed, S. Srinivas, S.M. Devi, A.A. Majeed, K.R. Rao, A.A. Khan, L.A. Sechi and N. Ahmed. 2005. Comparative genomics of Helicobacter pylori isolates recovered from ulcer disease patients in England. BMC Microbiol. 5: 32.
16. Kuipers E.J., I.P. Guillermo, S.G.M. Meuwissen and M.J. Blaser. 1995. Helicobacter pylori and atrophic gastritis: importance of the cagA status. J. Natl. Cancer. Inst. 87: 1777-1780.
17. Marshall B.J. and J.R. Warren. 1984. Unidentified curved bacilli in the stomach of patients with gastritis and peptic ulceration. Lancet. 1: 1311-1315.
18. Miehlke S., C. Kirsch, K. Agha-Amiri, T. Günther, N. Lehn, P. Malfertheiner, M. Stolte, G. Ehninger, E. Bayerdörffer. 2000. The Helicobacter pylori vacA s1, m1 genotype and cagA is associated with gastric carcinoma in Germany. Int. J. Cancer. 87: 322-327.
19. Miehlke S., K. Kibler, J.G. Kim, N. Figura, S.M. Small, D.Y. Graham and M.F. Go. 1996. Allelic variation in the cagA gene of Helicobacter pylori obtained from Korea compared to the United States. Am. J. Gastroenterol. 91: 1322-1325.
20. Mohammadi M., A. Oghalaie, N. Mohajerani, S. Massarrat, M. Nasiri, M. Bennedsen, H. Colding and L.P. Andersen. 2003. Prevalence of Helicobacter pylori vacuolating cytotoxin and its allelic mosaicism as a predictive marker for Iranian dyspeptic patients. Bull. Soc. Pathol. Exot. 96: 3-5.
21. Mukhopadhyay A.K., D. Kersulyte, J. Jeong, S. Datta, Y. Ito, A. Chowdhury, S. Chowdhury, A. Santra, S.K. Bhattacharya, T. Azuma and others. 2000. Distinctiveness of genotypes of Helicobacter pylori in Calcutta, India. J. Bacteriol. 182: 3219-3227.
22. Nimri L.F., I. Matalka, K.B. Hani and M. Ibrahim. 2006. Helicobacter pylori genotypes identified in gastric biopsy specimens from Jordanian patients. BMC Gastroenterol. 6: 27.
23. Odenbreit S., J. Püls, B. Sedlmaier, E. Gerland, W. Fischer and R. Haas. 2000. Translocation of Helicobacter pylori CagA into gastric epithelial cells by type IV secretion. Science. 287: 1497-1500. (Pubitemid 30127145)
24. Pan Z.J., D.E. Berg, R.W.M. Van Der Hulst, W.W. Su, A. Raudonikiene, S.D. Xiao, J. Dankert, G.N.J. Tytgat and A. Van Der Ende. 1998. Prevalence of vacuolating cytotoxin production and distribution of distinct vacA alleles in Helicobacter pylori from China. J. Infect. Dis. 178: 220-226.
25. Pan Z.J., R.W. Van Der Hulst, M. Feller, S.D. Xiao, G.N. Tytgat, J. Dankert and A. Van Der Ende. 1997. Equally high prevalence of infection with cagA-positive Helicobacter pylori in Chinese patients with peptic ulcer disease and those with chronic gastritis-associated dyspepsia. J. Clin. Microbiol. 35: 1344-1347.
26. Parsonnet J., G.D. Friedman, D.P. Vandersteen, Y. Chang, J.H. Vogelman, N. Orentreich and R.K., Sibley. 1991. Helicobacter pylori infection and the risk of gastric carcinoma. N. Engl. J.Med. 325: 1127-1131.
27. Podzorski R.P., D.S. Podzorski, A. Wuerth, V. Tolia. 2003. Analysis of the vacA, cagA, cagE, iceA, and babA2 genes in Helicobacter pylori from sixty-one pediatric patients from the Midwestern United States. Diagn. Microbiol. Infect. Dis. 46: 83-88.
28. Qabandi A.A., A.S. Mustafa, I. Siddique, A.K. Khajah, J.P. Madda and T.A Junaid. 2005. Distribution of vacA and cagA genotypes of Helicobacter pylori in Kuwait. Acta. Trop. 93: 283-288.
29. Rahman M., A.K. Mukhopadhyay, S. Nahar, S. Datta, M. Mashhud Ahmad, S. Sarker, I.M. Masud, L. Engstrand, M.J. Albert and G.B. Nair. 2003. DNA-level characterization of Helicobacter pylori strains from patients with overt disease and with benign infections in Bangladesh. J. Clin. Microbiol. 41: 2008-2014.
30. Salih B.A., M.F. Abasiyanik and N. Ahmed. 2007. A preliminary study on the genetic profile of cag pathogenicity-island and other virulent gene loci of Helicobacter pylori strains from Turkey. Infect. Genet. Evol. 7: 509-512.
31. Saribasak H., B.A. Salih, Y. Yamaoka and E. Sander. 2004. Analysis of Helicobacter pylori genotypes and correlation with clinical outcome in Turkey. J. Clin. Microbiol. 42: 1648-1651.
32. Siavoshi F., R. Malekzadeh, M. Daneshmand and H. Ashktorab. 2005. Helicobacter pylori endemic and gastric disease. Dig. Dis. Sci. 50: 2075-2080.
33. Talebkhan Y., M. Mohammadi, M.A. Mohagheghi, H.R. Vaziri, M.E. Hosseini, N. Mohajerani, A. Oghalaei, M. Esmaeili and L. Zamaninia. 2008. CagA gene and protein status among Iranian Helicobacter pylori strains. Dig. Dis. Sci. 53: 925-932.
34. Tan H.J., A.M. Rizal, M.Y. Rosmadi and K.L. Goh. 2005. Distribution of Helicobacter pylori cagA, cagE and vacA in different ethnic groups in Kuala Lumpur, Malaysia. J. Gastroenterol. Hepatol. 20: 589-594.
35. Tiwari S.K., A.A. Khan, K.S. Ahmed, S.M Ali, I. Ahmed, A. Habeeb, F. Kauser, M.A. Hussain, N. Ahmed and C.M. Habibullah. 2005. Polymerase chain reaction based analysis of the cytotoxin associated gene pathogenicity island of Helicobacter pylori from saliva: an approach for rapid molecular genotyping in relation to disease status. J. Gastroenterol. Hepatol. 20: 1560-1566.
36. Tummuru M.K., S.A. Sharma and M.J. Blaser. 1995. Helicobacter pylori picB, a homologue of the Bordetella pertussis toxin secretion protein, is required for induction of IL-8 in gastric epithelial cells. Mol. Microbiol. 18: 867-876.
37. Van Doom L.J., C. Figueiredo, F. Mégraud, S. Pena, P. Midolo, D.M. Queiroz, F. Carneiro, B. Vanderborght, M.D. Pegado, R. Sanna and others. 1999. Geographic distribution of vacA allelic types of Helicobacter pylori. Gastroenterology. 116: 823-830.
38. Van Doorn L.J., C. Figueiredo, R. Rossau, G. Jannes, M. van Asbroeck, J.C. Sousa, F. Carneiro and W.G.V. Quint. 1998. Typing of Helicobacter pylori vacA gene and detection of cagA gene by PCR and reverse hybridization. J. Clin. Microbiol. 36: 1271-1276.
39. Van Doorn L.J., C. Figueiredo, R. Sanna, A. Plaisier, P. Schneeberger, W.D. Boer and W. Quint. 1998a. Clinical relevance of the cagA, vacA, and iceA status of Helicobacter pylori. Gastroenterology. 115: 58-66. (Pubitemid 28307288)
40. Wong B.C.Y., Y. Yin, D.E. Berg, H.H.X. Xia, J.Z. Zhang, W.H. Wang, W.M. Wong, X.R. Huang, V.S.Y. Tang and S.K. Lam. 2001 Distribution of distinct vacA, cagA and iceA alleles in Helicobacter pylori in Hong Kong. Helicobacter. 6: 317-324.
41. Wotherspoon A.C., C. Ortiz-Hidalgo, M.R. Falzon and P.G. Isaacson. 1991. Helicobacter pylori-associated gastritis and primary B-cell gastric lymphoma. Lancet. 338: 1175-1176.
42. Yamaoka Y., H.M. Malaty, M.S. Osato and D.Y. Graham. 2000. Conservation of Helicobacter pylori genotypes in different ethnic groups in Houston, Texas. J. Infect. Dis. 181: 2083-2086.
43. Yamaoka Y., T. Kodama, O. Gutierrez, J.G. Kim, K. Kashima and D.Y. Graham. 1999. Relationship between Helicobacter pylori iceA, cagA, and vacA status and clinical outcome: studies in four different countries. J. Clin. Microbiol. 37: 2274-2279.
44. Zhou J., J. Zhang, C. Xu and L. He. 2004. CagA genotype and variants in Chinese Helicobacter pylori strains and relationship to gastroduodenal diseases. J. Med. Microbiol. 53: 231-235.