-
1
-
-
0141741231
-
The microbiology of acidic mine waters
-
Johnson DB, Hallberg KB (2003) The microbiology of acidic mine waters. Res Microbiol 154: 466-473.
-
(2003)
Res Microbiol
, vol.154
, pp. 466-473
-
-
Johnson, D.B.1
Hallberg, K.B.2
-
2
-
-
12944298784
-
Microbiology of a wetland ecosystem constructed to remediate mine drainage from a heavy metal mine
-
Hallberg KB, Johnson DB (2005) Microbiology of a wetland ecosystem constructed to remediate mine drainage from a heavy metal mine. Sci Total Environ 338: 53-66.
-
(2005)
Sci Total Environ
, vol.338
, pp. 53-66
-
-
Hallberg, K.B.1
Johnson, D.B.2
-
3
-
-
0042381486
-
Mediation of arsenic oxidation by Thiomonas sp. in acid-mine drainage (Carnoulès, France)
-
Bruneel O, Personné JC, Casiot C, Leblanc M, Elbaz-Poulichet F, et al. (2003) Mediation of arsenic oxidation by Thiomonas sp. in acid-mine drainage (Carnoulès, France). J Appl Microbiol 95: 492-499.
-
(2003)
J Appl Microbiol
, vol.95
, pp. 492-499
-
-
Bruneel, O.1
Personné, J.C.2
Casiot, C.3
Leblanc, M.4
Elbaz-Poulichet, F.5
-
4
-
-
0036378199
-
An arsenic(III)-oxidizing bacterial population: Selection, characterization, and performance in reactors
-
Battaglia-Brunet F, Dictor MC, Garrido F, Crouzet C, Morin D, et al. (2002) An arsenic(III)-oxidizing bacterial population: selection, characterization, and performance in reactors. J Appl Microbiol 93: 656-667.
-
(2002)
J Appl Microbiol
, vol.93
, pp. 656-667
-
-
Battaglia-Brunet, F.1
Dictor, M.C.2
Garrido, F.3
Crouzet, C.4
Morin, D.5
-
5
-
-
38149093947
-
Arsenite oxidation by a chemoautotrophic moderately acidophilic Thiomonas sp.: From the strain isolation to the gene study
-
Duquesne K, Lieutaud A, Ratouchniak J, Muller D, Lett MC, et al. (2008) Arsenite oxidation by a chemoautotrophic moderately acidophilic Thiomonas sp.: from the strain isolation to the gene study. Environ Microbiol 10: 228-237.
-
(2008)
Environ Microbiol
, vol.10
, pp. 228-237
-
-
Duquesne, K.1
Lieutaud, A.2
Ratouchniak, J.3
Muller, D.4
Lett, M.C.5
-
6
-
-
33644940187
-
Oxidation of iron, sulfur and arsenic in mine waters and mine wastes: An important role of novel Thiomonas spp
-
Tsezos AHM, Remondaki E, eds, Greece: National Technical University of Athens. pp
-
Coupland K, Battaglia-Brunet F, Hallberg KB, Dictor MC, Garrido F, et al. (2004) Oxidation of iron, sulfur and arsenic in mine waters and mine wastes: an important role of novel Thiomonas spp. In: Tsezos AHM, Remondaki E, eds. Biohydrometallurgy: a sustainable technology in evolution. Zografou, Greece: National Technical University of Athens. pp 639-646.
-
(2004)
Biohydrometallurgy: A sustainable technology in evolution. Zografou
, pp. 639-646
-
-
Coupland, K.1
Battaglia-Brunet, F.2
Hallberg, K.B.3
Dictor, M.C.4
Garrido, F.5
-
7
-
-
0030968533
-
Phylogeny of Thiobacillus cuprinus and other mixotrophic thiobacilli: Proposal for Thiomonas gen. nov
-
Moreira D, Amils R (1997) Phylogeny of Thiobacillus cuprinus and other mixotrophic thiobacilli: proposal for Thiomonas gen. nov. Int J Syst Bacteriol 47: 522-528.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 522-528
-
-
Moreira, D.1
Amils, R.2
-
8
-
-
68949094431
-
Carbon and arsenic metabolism in Thiomonas strains: Differences revealed diverse adaptation processes
-
Bryan CG, Marchal M, Battaglia-Brunet F, Klugler V, Lemaitre-Guillier C, et al. (2009) Carbon and arsenic metabolism in Thiomonas strains: differences revealed diverse adaptation processes. BMC Microbiol 9: 127.
-
(2009)
BMC Microbiol
, vol.9
, pp. 127
-
-
Bryan, C.G.1
Marchal, M.2
Battaglia-Brunet, F.3
Klugler, V.4
Lemaitre-Guillier, C.5
-
9
-
-
33646052829
-
Oxidation of arsenite by Thiomonas strains and characterization of Thiomonas arsenivorans sp. nov
-
Battaglia-Brunet F, Joulian C, Garrido F, Dictor MC, Morin D, et al. (2006) Oxidation of arsenite by Thiomonas strains and characterization of Thiomonas arsenivorans sp. nov. Antonie van Leeuwenhoek 89: 99-108.
-
(2006)
Antonie van Leeuwenhoek
, vol.89
, pp. 99-108
-
-
Battaglia-Brunet, F.1
Joulian, C.2
Garrido, F.3
Dictor, M.C.4
Morin, D.5
-
10
-
-
33751212458
-
Confirmation of Thiomonas delicata (formerly Thiobacillus delicatus) as a distinct species of the genus Thiomonas Moreira and Amils 1997 with comments on some species currently assigned to the genus
-
Katayama Y, Uchino Y, Wood AP, Kelly DP (2006) Confirmation of Thiomonas delicata (formerly Thiobacillus delicatus) as a distinct species of the genus Thiomonas Moreira and Amils 1997 with comments on some species currently assigned to the genus. Int J Syst Evol Microbiol 56: 2553-2557.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 2553-2557
-
-
Katayama, Y.1
Uchino, Y.2
Wood, A.P.3
Kelly, D.P.4
-
11
-
-
0141938368
-
Novel acidophiles isolated from moderately acidic mine drainage waters
-
Hallberg KB, Johnson DB (2003) Novel acidophiles isolated from moderately acidic mine drainage waters. Hydrometallurgy 71: 139-148.
-
(2003)
Hydrometallurgy
, vol.71
, pp. 139-148
-
-
Hallberg, K.B.1
Johnson, D.B.2
-
12
-
-
0038630697
-
Bacterial immobilization and oxidation of arsenic in acid mine drainage (Carnoulès creek, France)
-
Casiot C, Morin G, Juillot F, Bruneel O, Personné JC, et al. (2003) Bacterial immobilization and oxidation of arsenic in acid mine drainage (Carnoulès creek, France). Water Res 37: 2929-2936.
-
(2003)
Water Res
, vol.37
, pp. 2929-2936
-
-
Casiot, C.1
Morin, G.2
Juillot, F.3
Bruneel, O.4
Personné, J.C.5
-
13
-
-
63049138461
-
Sequencing the species pan-genome
-
Bentley S (2009) Sequencing the species pan-genome. Nat Rev Microbiol 7: 258-259.
-
(2009)
Nat Rev Microbiol
, vol.7
, pp. 258-259
-
-
Bentley, S.1
-
14
-
-
60149088444
-
Genomic islands: Tools of bacterial horizontal gene transfer and evolution
-
Juhas M, van der Meer JR, Gaillard M, Harding RM, Hood DW, et al. (2009) Genomic islands: tools of bacterial horizontal gene transfer and evolution. FEMS Microbiol Rev 33: 376-393.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 376-393
-
-
Juhas, M.1
van der Meer, J.R.2
Gaillard, M.3
Harding, R.M.4
Hood, D.W.5
-
15
-
-
34547642519
-
Role of staphylococcal phage and SaPI integrase in intra- and interspecies SaPI transfer
-
Maiques E, Ubeda C, Tormo MA, Ferrer MD, Lasa I, et al. (2007) Role of staphylococcal phage and SaPI integrase in intra- and interspecies SaPI transfer. J Bacteriol 189: 5608-5616.
-
(2007)
J Bacteriol
, vol.189
, pp. 5608-5616
-
-
Maiques, E.1
Ubeda, C.2
Tormo, M.A.3
Ferrer, M.D.4
Lasa, I.5
-
16
-
-
18244379036
-
Horizontal transfer of the high-pathogenicity island of Yersinia pseudotuberculosis
-
Lesic B, Carniel E (2005) Horizontal transfer of the high-pathogenicity island of Yersinia pseudotuberculosis. J Bacteriol 187: 3352-3358.
-
(2005)
J Bacteriol
, vol.187
, pp. 3352-3358
-
-
Lesic, B.1
Carniel, E.2
-
17
-
-
0038782123
-
Unusual integrase gene expression on the clc genomic island in Pseudomonas sp. strain B13
-
Sentchilo V, Ravatn R, Werlen C, Zehnder AJ, van der Meer JR (2003) Unusual integrase gene expression on the clc genomic island in Pseudomonas sp. strain B13. J Bacteriol 185: 4530-4538.
-
(2003)
J Bacteriol
, vol.185
, pp. 4530-4538
-
-
Sentchilo, V.1
Ravatn, R.2
Werlen, C.3
Zehnder, A.J.4
van der Meer, J.R.5
-
18
-
-
0033758756
-
Pathogenicity islands and the evolution of microbes
-
Hacker J, Kaper JB (2000) Pathogenicity islands and the evolution of microbes. Annu Rev Microbiol 54: 641-679.
-
(2000)
Annu Rev Microbiol
, vol.54
, pp. 641-679
-
-
Hacker, J.1
Kaper, J.B.2
-
20
-
-
27444438599
-
The microbial pan-genome
-
Medini D, Donati C, Tettelin H, Masignani V, Rappuoli R (2005) The microbial pan-genome. Curr Opin Genet Dev 15: 589-594.
-
(2005)
Curr Opin Genet Dev
, vol.15
, pp. 589-594
-
-
Medini, D.1
Donati, C.2
Tettelin, H.3
Masignani, V.4
Rappuoli, R.5
-
21
-
-
43849089834
-
Microbial diversity and the genetic nature of microbial species
-
Achtman M, Wagner M (2008) Microbial diversity and the genetic nature of microbial species. Nat Rev Microbiol 6: 431-440.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 431-440
-
-
Achtman, M.1
Wagner, M.2
-
22
-
-
59849086092
-
The bacterial species challenge: Making sense of genetic and ecological diversity
-
Fraser C, Alm EJ, Polz MF, Spratt BG, Hanage WP (2009) The bacterial species challenge: making sense of genetic and ecological diversity. Science 323: 741-746.
-
(2009)
Science
, vol.323
, pp. 741-746
-
-
Fraser, C.1
Alm, E.J.2
Polz, M.F.3
Spratt, B.G.4
Hanage, W.P.5
-
23
-
-
25444524604
-
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: Implications for the microbial "pan-genome
-
Tettelin H, Masignani V, Cieslewicz MJ, Donati C, Medini D, et al. (2005) Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome". Proc Natl Acad Sci U S A 102: 13950-13955.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 13950-13955
-
-
Tettelin, H.1
Masignani, V.2
Cieslewicz, M.J.3
Donati, C.4
Medini, D.5
-
24
-
-
37749041470
-
Patterns and implications of gene gain and loss in the evolution of Prochlorococcus
-
doi:10.1371/journal.pgen.0030231
-
Kettler GC, Martiny AC, Huang K, Zucker J, Coleman ML, et al. (2007) Patterns and implications of gene gain and loss in the evolution of Prochlorococcus. PLoS Genet 3: e231. doi:10.1371/journal.pgen.0030231.
-
(2007)
PLoS Genet
, vol.3
-
-
Kettler, G.C.1
Martiny, A.C.2
Huang, K.3
Zucker, J.4
Coleman, M.L.5
-
25
-
-
33645232361
-
Genomic islands and the ecology and evolution of Prochlorococcus
-
Coleman ML, Sullivan MB, Martiny AC, Steglich C, Barry K, et al. (2006) Genomic islands and the ecology and evolution of Prochlorococcus. Science 311: 1768-1770.
-
(2006)
Science
, vol.311
, pp. 1768-1770
-
-
Coleman, M.L.1
Sullivan, M.B.2
Martiny, A.C.3
Steglich, C.4
Barry, K.5
-
26
-
-
57749188258
-
Homologous recombination in Agrobacterium: Potential implications for the genomic species concept in bacteria
-
Costechareyre D, Bertolla F, Nesme X (2009) Homologous recombination in Agrobacterium: potential implications for the genomic species concept in bacteria. Mol Biol Evol 26: 167-176.
-
(2009)
Mol Biol Evol
, vol.26
, pp. 167-176
-
-
Costechareyre, D.1
Bertolla, F.2
Nesme, X.3
-
27
-
-
0035931866
-
Life in extreme environments
-
Rothschild LJ, Mancinelli RL (2001) Life in extreme environments. Nature 409: 1092-1101.
-
(2001)
Nature
, vol.409
, pp. 1092-1101
-
-
Rothschild, L.J.1
Mancinelli, R.L.2
-
28
-
-
34250348135
-
Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene pool
-
Schluter A, Szczepanowski R, Puhler A, Top EM (2007) Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene pool. FEMS Microbiol Rev 31: 449-477.
-
(2007)
FEMS Microbiol Rev
, vol.31
, pp. 449-477
-
-
Schluter, A.1
Szczepanowski, R.2
Puhler, A.3
Top, E.M.4
-
29
-
-
3042568671
-
Operon mer: Bacterial resistance to mercury and potential for bioremediation of contaminated environments
-
Nascimento AM, Chartone-Souza E (2003) Operon mer: bacterial resistance to mercury and potential for bioremediation of contaminated environments. Genet Mol Res 2: 92-101.
-
(2003)
Genet Mol Res
, vol.2
, pp. 92-101
-
-
Nascimento, A.M.1
Chartone-Souza, E.2
-
30
-
-
20444496515
-
Prokaryotic sulfur oxidation
-
Friedrich CG, Bardischewsky F, Rother D, Quentmeier A, Fischer J (2005) Prokaryotic sulfur oxidation. Curr Opin Microbiol 8: 253-259.
-
(2005)
Curr Opin Microbiol
, vol.8
, pp. 253-259
-
-
Friedrich, C.G.1
Bardischewsky, F.2
Rother, D.3
Quentmeier, A.4
Fischer, J.5
-
31
-
-
52949095063
-
Sulfur metabolism in phototrophic sulfur bacteria
-
Frigaard NU, Dahl C (2009) Sulfur metabolism in phototrophic sulfur bacteria. Adv Microb Physiol 54: 103-200.
-
(2009)
Adv Microb Physiol
, vol.54
, pp. 103-200
-
-
Frigaard, N.U.1
Dahl, C.2
-
32
-
-
67649258517
-
Cytoplasmic pH measurement and homeostasis in bacteria and archaea
-
Slonczewski JL, Fujisawa M, Dopson M, Krulwich TA (2009) Cytoplasmic pH measurement and homeostasis in bacteria and archaea. Adv Microb Physiol 55: 1-79, 317.
-
(2009)
Adv Microb Physiol
, vol.55
, Issue.1-79
, pp. 317
-
-
Slonczewski, J.L.1
Fujisawa, M.2
Dopson, M.3
Krulwich, T.A.4
-
33
-
-
34047264809
-
Life in acid: PH homeostasis in acidophiles
-
Baker-Austin C, Dopson M (2007) Life in acid: pH homeostasis in acidophiles. Trends Microbiol 15: 165-171.
-
(2007)
Trends Microbiol
, vol.15
, pp. 165-171
-
-
Baker-Austin, C.1
Dopson, M.2
-
34
-
-
0036468233
-
Acid survival of Helicobacter pylori: How does urease activity trigger cytoplasmic pH homeostasis?
-
Stingl K, Altendorf K, Bakker EP (2002) Acid survival of Helicobacter pylori: how does urease activity trigger cytoplasmic pH homeostasis? Trends Microbiol 10: 70-74.
-
(2002)
Trends Microbiol
, vol.10
, pp. 70-74
-
-
Stingl, K.1
Altendorf, K.2
Bakker, E.P.3
-
35
-
-
0037126294
-
A biological role for prokaryotic ClC chloride channels
-
Iyer R, Iverson TM, Accardi A, Miller C (2002) A biological role for prokaryotic ClC chloride channels. Nature 419: 715-718.
-
(2002)
Nature
, vol.419
, pp. 715-718
-
-
Iyer, R.1
Iverson, T.M.2
Accardi, A.3
Miller, C.4
-
36
-
-
28644437016
-
A bacterial view of the periodic table: Genes and proteins for toxic inorganic ions
-
Silver S, Phung le T (2005) A bacterial view of the periodic table: genes and proteins for toxic inorganic ions. J Ind Microbiol Biotechnol 32: 587-605.
-
(2005)
J Ind Microbiol Biotechnol
, vol.32
, pp. 587-605
-
-
Silver, S.1
Phung le, T.2
-
37
-
-
36248981481
-
Multimetal resistance and tolerance in microbial biofilms
-
Harrison JJ, Ceri H, Turner RJ (2007) Multimetal resistance and tolerance in microbial biofilms. Nat Rev Micro 5: 928-938.
-
(2007)
Nat Rev Micro
, vol.5
, pp. 928-938
-
-
Harrison, J.J.1
Ceri, H.2
Turner, R.J.3
-
38
-
-
34247589893
-
A tale of two oxidation states: Bacterial colonization of arsenic-rich environments
-
doi:10.1371/journal.pgen.0030053
-
Muller D, Médigue C, Koechler S, Barbe V, Barakat M, et al. (2007) A tale of two oxidation states: bacterial colonization of arsenic-rich environments. PLoS Genet 3: e53. doi:10.1371/journal.pgen.0030053.
-
(2007)
PLoS Genet
, vol.3
-
-
Muller, D.1
Médigue, C.2
Koechler, S.3
Barbe, V.4
Barakat, M.5
-
39
-
-
13544263302
-
Genes and enzymes involved in bacterial oxidation and reduction of inorganic arsenic
-
Silver S, Phung LT (2005) Genes and enzymes involved in bacterial oxidation and reduction of inorganic arsenic. Appl Environ Microbiol 71: 599-608.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 599-608
-
-
Silver, S.1
Phung, L.T.2
-
40
-
-
2442605626
-
As(III) and Sb(III) uptake by GlpF and efflux by ArsB in Escherichia coli
-
Meng YL, Liu Z, Rosen BP (2004) As(III) and Sb(III) uptake by GlpF and efflux by ArsB in Escherichia coli. J Biol Chem 279: 18334-18341.
-
(2004)
J Biol Chem
, vol.279
, pp. 18334-18341
-
-
Meng, Y.L.1
Liu, Z.2
Rosen, B.P.3
-
41
-
-
0242362757
-
Modulation of DNA repair processes by arsenic and selenium compounds
-
Hartwig A, Blessing H, Schwerdtle T, Walter I (2003) Modulation of DNA repair processes by arsenic and selenium compounds. Toxicology 193: 161-169.
-
(2003)
Toxicology
, vol.193
, pp. 161-169
-
-
Hartwig, A.1
Blessing, H.2
Schwerdtle, T.3
Walter, I.4
-
42
-
-
0037972159
-
Induction of oxidative DNA damage by arsenite and its trivalent and pentavalent methylated metabolites in cultured human cells and isolated DNA
-
Schwerdtle T, Walter I, Mackiw I, Hartwig A (2003) Induction of oxidative DNA damage by arsenite and its trivalent and pentavalent methylated metabolites in cultured human cells and isolated DNA. Carcinogenesis 24: 967-974.
-
(2003)
Carcinogenesis
, vol.24
, pp. 967-974
-
-
Schwerdtle, T.1
Walter, I.2
Mackiw, I.3
Hartwig, A.4
-
43
-
-
70349274104
-
Structural and mechanistic determinants of c-di-GMP signalling
-
Schirmer T, Jenal U (2009) Structural and mechanistic determinants of c-di-GMP signalling. Nat Rev Microbiol 7: 724-735.
-
(2009)
Nat Rev Microbiol
, vol.7
, pp. 724-735
-
-
Schirmer, T.1
Jenal, U.2
-
44
-
-
63049137897
-
Principles of c-di-GMP signalling in bacteria
-
Hengge R (2009) Principles of c-di-GMP signalling in bacteria. Nat Rev Microbiol 7: 263-273.
-
(2009)
Nat Rev Microbiol
, vol.7
, pp. 263-273
-
-
Hengge, R.1
-
45
-
-
2942689400
-
Shaping bacterial genomes with integrative and conjugative elements
-
Burrus V, Waldor MK (2004) Shaping bacterial genomes with integrative and conjugative elements. Res Microbiol 155: 376-386.
-
(2004)
Res Microbiol
, vol.155
, pp. 376-386
-
-
Burrus, V.1
Waldor, M.K.2
-
46
-
-
0037125989
-
Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae
-
Tettelin H, Masignani V, Cieslewicz MJ, Eisen JA, Peterson S, et al. (2002) Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae. Proc Natl Acad Sci U S A 99: 12391-12396.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 12391-12396
-
-
Tettelin, H.1
Masignani, V.2
Cieslewicz, M.J.3
Eisen, J.A.4
Peterson, S.5
-
47
-
-
2942571207
-
Extensive genomic diversity in pathogenic Escherichia coli and Shigella strains revealed by comparative genomic hybridization microarray
-
Fukiya S, Mizoguchi H, Tobe T, Mori H (2004) Extensive genomic diversity in pathogenic Escherichia coli and Shigella strains revealed by comparative genomic hybridization microarray. J Bacteriol 186: 3911-3921.
-
(2004)
J Bacteriol
, vol.186
, pp. 3911-3921
-
-
Fukiya, S.1
Mizoguchi, H.2
Tobe, T.3
Mori, H.4
-
48
-
-
33846603341
-
Bacillus subtilis genome diversity
-
Earl AM, Losick R, Kolter R (2007) Bacillus subtilis genome diversity. J Bacteriol 189: 1163-1170.
-
(2007)
J Bacteriol
, vol.189
, pp. 1163-1170
-
-
Earl, A.M.1
Losick, R.2
Kolter, R.3
-
49
-
-
0000770675
-
Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
-
Wayne LG, Brenner DJ, Colwell RR, Grimont PAD, Kandler O, et al. (1987) Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37: 463-464.
-
(1987)
Int J Syst Bacteriol
, vol.37
, pp. 463-464
-
-
Wayne, L.G.1
Brenner, D.J.2
Colwell, R.R.3
Grimont, P.A.D.4
Kandler, O.5
-
50
-
-
33745067721
-
Ten years of bacterial genome sequencing: Comparative-genomics-based discoveries
-
Binnewies TT, Motro Y, Hallin PF, Lund O, Dunn D, et al. (2006) Ten years of bacterial genome sequencing: comparative-genomics-based discoveries. Funct Integr Genomics 6: 165-185.
-
(2006)
Funct Integr Genomics
, vol.6
, pp. 165-185
-
-
Binnewies, T.T.1
Motro, Y.2
Hallin, P.F.3
Lund, O.4
Dunn, D.5
-
51
-
-
0037337810
-
Comparative genomic analyses of the Vibrio pathogenicity island and cholera toxin prophage regions in nonepidemic serogroup strains of Vibrio cholerae
-
Li M, Kotetishvili M, Chen Y, Sozhamannan S (2003) Comparative genomic analyses of the Vibrio pathogenicity island and cholera toxin prophage regions in nonepidemic serogroup strains of Vibrio cholerae. Appl Environ Microbiol 69: 1728-1738.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 1728-1738
-
-
Li, M.1
Kotetishvili, M.2
Chen, Y.3
Sozhamannan, S.4
-
52
-
-
33846686822
-
A horizontally acquired filamentous phage contributes to the pathogenicity of the plague Bacillus
-
Derbise A, Chenal-Francisque V, Pouillot F, Fayolle C, Prevost MC, et al. (2007) A horizontally acquired filamentous phage contributes to the pathogenicity of the plague Bacillus. Mol Microbiol 63: 1145-1157.
-
(2007)
Mol Microbiol
, vol.63
, pp. 1145-1157
-
-
Derbise, A.1
Chenal-Francisque, V.2
Pouillot, F.3
Fayolle, C.4
Prevost, M.C.5
-
53
-
-
4544321685
-
Phages and the evolution of bacterial pathogens: From genomic rearrangements to lysogenic conversion
-
Brussow H, Canchaya C, Hardt WD (2004) Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion. Microbiol Mol Biol Rev 68: 560-602.
-
(2004)
Microbiol Mol Biol Rev
, vol.68
, pp. 560-602
-
-
Brussow, H.1
Canchaya, C.2
Hardt, W.D.3
-
54
-
-
68249086310
-
-
Berglund EC, Frank AC, Calteau A, Vinnere Pettersson O, Granberg F, et al. (2009) Run-off replication of host-adaptability genes is associated with gene transfer agents in the genome of mouse-infecting Bartonella grahamii. PLoS Genet 5: e1000546. doi:10.1371/journal.pgen.1000546.
-
Berglund EC, Frank AC, Calteau A, Vinnere Pettersson O, Granberg F, et al. (2009) Run-off replication of host-adaptability genes is associated with gene transfer agents in the genome of mouse-infecting Bartonella grahamii. PLoS Genet 5: e1000546. doi:10.1371/journal.pgen.1000546.
-
-
-
-
55
-
-
42049110060
-
Efficient phage-mediated pigment biosynthesis in oceanic cyanobacteria
-
Dammeyer T, Bagby SC, Sullivan MB, Chisholm SW, Frankenberg-Dinkel N (2008) Efficient phage-mediated pigment biosynthesis in oceanic cyanobacteria. Curr Biol 18: 442-448.
-
(2008)
Curr Biol
, vol.18
, pp. 442-448
-
-
Dammeyer, T.1
Bagby, S.C.2
Sullivan, M.B.3
Chisholm, S.W.4
Frankenberg-Dinkel, N.5
-
56
-
-
22544481110
-
Potential photosynthesis gene recombination between Prochlorococcus and Synechococcus via viral intermediates
-
Zeidner G, Bielawski JP, Shmoish M, Scanlan DJ, Sabehi G, et al. (2005) Potential photosynthesis gene recombination between Prochlorococcus and Synechococcus via viral intermediates. Environ Microbiol 7: 1505-1513.
-
(2005)
Environ Microbiol
, vol.7
, pp. 1505-1513
-
-
Zeidner, G.1
Bielawski, J.P.2
Shmoish, M.3
Scanlan, D.J.4
Sabehi, G.5
-
57
-
-
58149213882
-
Phage-mediated intergeneric transfer of toxin genes
-
Chen J, Novick RP (2009) Phage-mediated intergeneric transfer of toxin genes. Science 323: 139-141.
-
(2009)
Science
, vol.323
, pp. 139-141
-
-
Chen, J.1
Novick, R.P.2
-
58
-
-
55749108735
-
Type IV secretion systems: Tools of bacterial horizontal gene transfer and virulence
-
Juhas M, Crook DW, Hood DW (2008) Type IV secretion systems: tools of bacterial horizontal gene transfer and virulence. Cell Microbiol 10: 2377-2386.
-
(2008)
Cell Microbiol
, vol.10
, pp. 2377-2386
-
-
Juhas, M.1
Crook, D.W.2
Hood, D.W.3
-
59
-
-
33645065353
-
Natural transformation of Neisseria gonorrhoeae: From DNA donation to homologous recombination
-
Hamilton HL, Dillard JP (2006) Natural transformation of Neisseria gonorrhoeae: from DNA donation to homologous recombination. Mol Microbiol 59: 376-385.
-
(2006)
Mol Microbiol
, vol.59
, pp. 376-385
-
-
Hamilton, H.L.1
Dillard, J.P.2
-
60
-
-
64349087443
-
Genesis, effects and fates of repeats in prokaryotic genomes
-
Treangen TJ, Abraham AL, Touchon M, Rocha EP (2009) Genesis, effects and fates of repeats in prokaryotic genomes. FEMS Microbiol Rev 33: 539-571.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 539-571
-
-
Treangen, T.J.1
Abraham, A.L.2
Touchon, M.3
Rocha, E.P.4
-
61
-
-
0024078126
-
Phenotypic switching of Thiobacillus ferrooxidans
-
Schrader JA, Holmes DS (1988) Phenotypic switching of Thiobacillus ferrooxidans. J Bacteriol 170: 3915-3923.
-
(1988)
J Bacteriol
, vol.170
, pp. 3915-3923
-
-
Schrader, J.A.1
Holmes, D.S.2
-
62
-
-
0141938368
-
Novel acidophiles isolated from moderately acidic mine drainage waters
-
Hallberg KB, Johnson DB (2003) Novel acidophiles isolated from moderately acidic mine drainage waters. Hydrometallurgy 71: 139-148.
-
(2003)
Hydrometallurgy
, vol.71
, pp. 139-148
-
-
Hallberg, K.B.1
Johnson, D.B.2
-
63
-
-
0014161350
-
Thiobacillus perometabolis nov. sp., a nonautotrophic thiobacillus
-
London J, Rittenberg SC (1967) Thiobacillus perometabolis nov. sp., a nonautotrophic thiobacillus. Arch Mikrobiol 59: 218-225.
-
(1967)
Arch Mikrobiol
, vol.59
, pp. 218-225
-
-
London, J.1
Rittenberg, S.C.2
-
64
-
-
0014713693
-
The quantitative measurement of DNA hybridization from renaturation rates
-
De Ley J, Cattoir H, Reynaerts A (1970) The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12: 133-142.
-
(1970)
Eur J Biochem
, vol.12
, pp. 133-142
-
-
De Ley, J.1
Cattoir, H.2
Reynaerts, A.3
-
65
-
-
0020549589
-
Studies on the spectrophotometric determination of DNA hybridization from renaturates rates
-
Huss VAR, Festl H, Schleifer KH (1983) Studies on the spectrophotometric determination of DNA hybridization from renaturates rates. Syst Appl Microbiol 4: 184-192.
-
(1983)
Syst Appl Microbiol
, vol.4
, pp. 184-192
-
-
Huss, V.A.R.1
Festl, H.2
Schleifer, K.H.3
-
66
-
-
28444453303
-
Syntons, metabolons and interactons: An exact graph-theoretical approach for exploring neighbourhood between genomic and functional data
-
Boyer F, Morgat A, Labarre L, Pothier J, Viari A (2005) Syntons, metabolons and interactons: an exact graph-theoretical approach for exploring neighbourhood between genomic and functional data. Bioinformatics 21: 4209-4215.
-
(2005)
Bioinformatics
, vol.21
, pp. 4209-4215
-
-
Boyer, F.1
Morgat, A.2
Labarre, L.3
Pothier, J.4
Viari, A.5
-
67
-
-
31644444476
-
MaGe: A microbial genome annotation system supported by synteny results
-
Vallenet D, Labarre L, Rouy Z, Barbe V, Bocs S, et al. (2006) MaGe: a microbial genome annotation system supported by synteny results. Nucleic Acids Res 34: 53-65.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 53-65
-
-
Vallenet, D.1
Labarre, L.2
Rouy, Z.3
Barbe, V.4
Bocs, S.5
-
68
-
-
0037200201
-
A new nonlinear normalization method for reducing variability in DNA microarray experiments
-
research0048.0041-0048.0016
-
Workman C, Jensen LJ, Jarmer H, Berka R, Gautier L, et al. (2002) A new nonlinear normalization method for reducing variability in DNA microarray experiments. Genome Biol 3: research0048.0041-0048.0016.
-
(2002)
Genome Biol
, vol.3
-
-
Workman, C.1
Jensen, L.J.2
Jarmer, H.3
Berka, R.4
Gautier, L.5
-
69
-
-
3543105225
-
Circular binary segmentation for the analysis of array-based DNA copy number data
-
Olshen AB, Venkatraman ES, Lucito R, Wigler M (2004) Circular binary segmentation for the analysis of array-based DNA copy number data. Biostatistics 5: 557-572.
-
(2004)
Biostatistics
, vol.5
, pp. 557-572
-
-
Olshen, A.B.1
Venkatraman, E.S.2
Lucito, R.3
Wigler, M.4
-
70
-
-
0034255358
-
DbClustal: Rapid and reliable global multiple alignments of protein sequences detected by database searches
-
Thompson JD, Plewniak F, Thierry J, Poch O (2000) DbClustal: rapid and reliable global multiple alignments of protein sequences detected by database searches. Nucleic Acids Res 28: 2919-2926.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 2919-2926
-
-
Thompson, J.D.1
Plewniak, F.2
Thierry, J.3
Poch, O.4
-
72
-
-
0023046874
-
Codon usage in yeast: Cluster analysis clearly differentiates highly and lowly expressed genes
-
Sharp PM, Tuohy TM, Mosurski KR (1986) Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes. Nucleic Acids Res 14: 5125-5143.
-
(1986)
Nucleic Acids Res
, vol.14
, pp. 5125-5143
-
-
Sharp, P.M.1
Tuohy, T.M.2
Mosurski, K.R.3
-
73
-
-
0037109119
-
Use and misuse of correspondence analysis in codon usage studies
-
Perriere G, Thioulouse J (2002) Use and misuse of correspondence analysis in codon usage studies. Nucleic Acids Res 30: 4548-4555.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 4548-4555
-
-
Perriere, G.1
Thioulouse, J.2
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