-
1
-
-
0026055447
-
A generalized stochastic model for the analysis of infectious disease final size data
-
Addy, C. Jr, et al. (1991) A generalized stochastic model for the analysis of infectious disease final size data. Biometrics, 47, 961-974.
-
(1991)
Biometrics
, vol.47
, pp. 961-974
-
-
Addy, C.Jr.1
-
2
-
-
33746826011
-
JAK/STAT signalling in drosophila: insights into conserved regulatory and cellular functions
-
Arbouzova, N.I. and Zeidler, M.P. (2006) JAK/STAT signalling in drosophila: insights into conserved regulatory and cellular functions. Development, 133, 2605-2616.
-
(2006)
Development
, vol.133
, pp. 2605-2616
-
-
Arbouzova, N.I.1
Zeidler, M.P.2
-
3
-
-
0036964474
-
Approximate Bayesian computation in population genetics
-
Beaumont, M.A. et al. (2002) Approximate Bayesian computation in population genetics. Genetics, 162, 2025-2035.
-
(2002)
Genetics
, vol.162
, pp. 2025-2035
-
-
Beaumont, M.A.1
-
4
-
-
73549122582
-
Non-linear regression models for approximate Bayesian computation
-
[Epub ahead of print, doi:10.1007/s11222-009-9116-0]
-
Blum, M.G. and François, O. (2009) Non-linear regression models for approximate Bayesian computation. Stat. Comput., [Epub ahead of print, doi:10.1007/s11222-009-9116-0].
-
(2009)
Stat. Comput.
-
-
Blum, M.G.1
François, O.2
-
6
-
-
58549083142
-
Input-output behavior of ErbB signaling pathways as revealed by a mass action model trained against dynamic data
-
Chen, W.W. et al. (2009) Input-output behavior of ErbB signaling pathways as revealed by a mass action model trained against dynamic data. Mol. Syst. Biol., 5, 239.
-
(2009)
Mol. Syst. Biol.
, vol.5
, pp. 239
-
-
Chen, W.W.1
-
7
-
-
34547321913
-
Exact Bayesian inference and model selection for stochastic models of epidemics among a community of households
-
Clancy, D. and O'Neill, P.D. (2007) Exact Bayesian inference and model selection for stochastic models of epidemics among a community of households. Scand. J. Stat., 34, 259-274.
-
(2007)
Scand. J. Stat.
, vol.34
, pp. 259-274
-
-
Clancy, D.1
O'Neill, P.D.2
-
8
-
-
0030840464
-
STATs and gene regulation
-
Darnell, J.E. (1997) STATs and gene regulation. Science, 277, 1630-1635.
-
(1997)
Science
, vol.277
, pp. 1630-1635
-
-
Darnell, J.E.1
-
9
-
-
75249101550
-
An adaptive sequential Monte Carlo method for approximate Bayesian computation
-
Imperial College Technical Report
-
Del Moral, P. et al. (2009) An adaptive sequential Monte Carlo method for approximate Bayesian computation. Imperial College Technical Report.
-
(2009)
-
-
Del Moral, P.1
-
10
-
-
0030579560
-
Prionics or the kinetic basis of prion diseases
-
Eigen, M. (1996) Prionics or the kinetic basis of prion diseases. Biophys. Chem., 63, A1-A18.
-
(1996)
Biophys. Chem.
, vol.63
-
-
Eigen, M.1
-
11
-
-
77954027774
-
Bayesian computation and model selection in population genetics
-
arXiv:0901.2231v1 [stat.ME]
-
Excoffier, C.L.D.W.L. (2009) Bayesian computation and model selection in population genetics. arXiv:0901.2231v1 [stat.ME].
-
(2009)
-
-
Excoffier, C.L.D.W.L.1
-
12
-
-
0004012196
-
-
2nd edn. Chapman & Hall/CRC, London
-
Gelman, A. et al. (2003) Bayesian Data Analysis, 2nd edn. Chapman & Hall/CRC, London.
-
(2003)
Bayesian Data Analysis
-
-
Gelman, A.1
-
13
-
-
33645429016
-
Exact stochastic simulation of coupled chemical reactions
-
Gillespie, D. (1977) Exact stochastic simulation of coupled chemical reactions. J. Phys. Chem., 81, 2340-2361.
-
(1977)
J. Phys. Chem.
, vol.81
, pp. 2340-2361
-
-
Gillespie, D.1
-
14
-
-
75249099118
-
ABC likelihood-free methods for model choice in Gibbs random fields
-
Grelaud, A. et al. (2009) ABC likelihood-free methods for model choice in Gibbs random fields. Bayesian Anal., 4, 317-336.
-
(2009)
Bayesian Anal.
, vol.4
, pp. 317-336
-
-
Grelaud, A.1
-
15
-
-
35748977901
-
Universally sloppy parameter sensitivities in systems biology models
-
Gutenkunst, R. et al. (2007) Universally sloppy parameter sensitivities in systems biology models. PLoS Comput. Biol., 3, e189.
-
(2007)
PLoS Comput. Biol.
, vol.3
-
-
Gutenkunst, R.1
-
16
-
-
0034306290
-
STAT proteins and transcriptional responses to extracellular signals
-
Horvath, C.M. (2000) STAT proteins and transcriptional responses to extracellular signals. Trends Biochem. Sci., 25, 496-502.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 496-502
-
-
Horvath, C.M.1
-
17
-
-
0003414592
-
-
1st edn. The Clarendon Press, Oxford
-
Jeffreys, H. (1939) Theory of Probability, 1st edn. The Clarendon Press, Oxford.
-
(1939)
Theory of Probability
-
-
Jeffreys, H.1
-
19
-
-
0000413462
-
Regulation of interferon-gamma-activated STAT1 by the ubiquitin-proteasome pathway
-
Kim, T.K. and Maniatis, T. (1996) Regulation of interferon-gamma-activated STAT1 by the ubiquitin-proteasome pathway. Science, 273, 1717-1719.
-
(1996)
Science
, vol.273
, pp. 1717-1719
-
-
Kim, T.K.1
Maniatis, T.2
-
20
-
-
47749140357
-
Parameter inference for biochemical systems that undergo a Hopf bifurcation
-
Kirk, P.D.W. et al. (2008) Parameter inference for biochemical systems that undergo a Hopf bifurcation. Biophys. J., 95, 540-549.
-
(2008)
Biophys. J.
, vol.95
, pp. 540-549
-
-
Kirk, P.D.W.1
-
21
-
-
0029738317
-
Multiple tyrosine residues in the cytosolic domain of the erythropoietin receptor promote activation of STAT5
-
Klingmüller, U. et al. (1996) Multiple tyrosine residues in the cytosolic domain of the erythropoietin receptor promote activation of STAT5. Proc. Natl Acad. Sci. USA, 93, 8324-8328.
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 8324-8328
-
-
Klingmüller, U.1
-
22
-
-
0033558170
-
Dynamic redistribution of STAT1 protein in IFN signaling visualized by GFP fusion proteins
-
Köster, M. and Hauser, H. (1999) Dynamic redistribution of STAT1 protein in IFN signaling visualized by GFP fusion proteins. Eur. J. Biochem., 260, 137-144.
-
(1999)
Eur. J. Biochem.
, vol.260
, pp. 137-144
-
-
Köster, M.1
Hauser, H.2
-
23
-
-
0019899273
-
Household and community transmission parameters from final distributions of infections in households
-
Longini, I.L. Jr. and Koopman, J. (1982) Household and community transmission parameters from final distributions of infections in households. Biometrics, 38, 115-126.
-
(1982)
Biometrics
, vol.38
, pp. 115-126
-
-
Longini I.L., Jr.1
Koopman, J.2
-
24
-
-
0346734143
-
Markov chain Monte Carlo without likelihoods
-
Marjoram, P. et al. (2003) Markov chain Monte Carlo without likelihoods. Proc. Natl Acad. Sci. USA, 100, 15324-15328.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 15324-15328
-
-
Marjoram, P.1
-
25
-
-
0842309879
-
Uses and abuses of mathematics in biology
-
May, R.M. (2004) Uses and abuses of mathematics in biology. Science, 303, 790-793.
-
(2004)
Science
, vol.303
, pp. 790-793
-
-
May, R.M.1
-
27
-
-
4644314875
-
Tests for cycling in a signalling pathway
-
Müller, T.G. et al. (2004) Tests for cycling in a signalling pathway. J.R. Stat. Soc. Ser. C, 53, 557.
-
(2004)
J. R. Stat. Soc. Ser. C
, vol.53
, pp. 557
-
-
Müller, T.G.1
-
28
-
-
0034354606
-
Analyses of infectious disease data from household outbreaks by Markov chain Monte Carlo methods
-
O'Neill, P. et al. (2000) Analyses of infectious disease data from household outbreaks by Markov chain Monte Carlo methods. Appl. Stat., 49, 517-542.
-
(2000)
Appl. Stat.
, vol.49
, pp. 517-542
-
-
O'Neill, P.1
-
29
-
-
0020321767
-
Novel proteinaceous infectious particles cause scrapie
-
Prusiner, S.B. (1982) Novel proteinaceous infectious particles cause scrapie. Science, 216, 136-144.
-
(1982)
Science
, vol.216
, pp. 136-144
-
-
Prusiner, S.B.1
-
30
-
-
36949017519
-
Using likelihood-free inference to compare evolutionary dynamics of the protein networks of H. pylori and P. falciparum.
-
Ratmann, O. et al. (2007) Using likelihood-free inference to compare evolutionary dynamics of the protein networks of H. pylori and P. falciparum. PLoS Comput. Biol., 3, 2266-2278.
-
(2007)
PLoS Comput. Biol.
, vol.3
, pp. 2266-2278
-
-
Ratmann, O.1
-
31
-
-
67649819681
-
Model criticism based on likelihood-free inference, with an application to protein network evolution
-
Ratmann, O. et al. (2009) Model criticism based on likelihood-free inference, with an application to protein network evolution. Proc. Natl Acad. Sci. USA, 106, 10576-10581.
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 10576-10581
-
-
Ratmann, O.1
-
32
-
-
72949108893
-
The ABC of reverse engineering biological signalling systems
-
Secrier, M. et al. (2009) The ABC of reverse engineering biological signalling systems. Mol. BioSyst. 5, 1925-1935.
-
(2009)
Mol. BioSyst.
, vol.5
, pp. 1925-1935
-
-
Secrier, M.1
-
33
-
-
33846939958
-
Sequential Monte Carlo without likelihoods
-
Sisson, S.A. et al. (2007) Sequential Monte Carlo without likelihoods. Proc. Natl Acad. Sci. USA, 104, 1760-1765.
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 1760-1765
-
-
Sisson, S.A.1
-
34
-
-
0037417886
-
Identification of nucleocytoplasmic cycling as a remote sensor in cellular signaling by databased modeling
-
Swameye, I. et al. (2003) Identification of nucleocytoplasmic cycling as a remote sensor in cellular signaling by databased modeling. Proc. Natl Acad. Sci. USA, 100, 1028-1033.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 1028-1033
-
-
Swameye, I.1
-
35
-
-
13844298920
-
Modeling the nonlinear dynamics of cellular signal transduction
-
Timmer, J. and Müller, T. (2004) Modeling the nonlinear dynamics of cellular signal transduction. Int. J. Bifurcat. Chaos, 14, 2069-2079.
-
(2004)
Int. J. Bifurcat. Chaos
, vol.14
, pp. 2069-2079
-
-
Timmer, J.1
Müller, T.2
-
36
-
-
58149142997
-
Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems
-
Toni, T. et al. (2009) Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems. J.R. Soc. Interface, 6, 187-202.
-
(2009)
J. R. Soc. Interface
, vol.6
, pp. 187-202
-
-
Toni, T.1
-
37
-
-
40749094910
-
Bayesian ranking of biochemical system models
-
Vyshemirsky, V. and Girolami, M.A. (2008) Bayesian ranking of biochemical system models. Bioinformatics, 24, 833-839.
-
(2008)
Bioinformatics
, vol.24
, pp. 833-839
-
-
Vyshemirsky, V.1
Girolami, M.A.2
-
38
-
-
34547844074
-
A Markov random field model for network-based analysis of genomic data
-
Wei, Z. and Li, H. (2007) A Markov random field model for network-based analysis of genomic data. Bioinformatics, 23, 1537-1544.
-
(2007)
Bioinformatics
, vol.23
, pp. 1537-1544
-
-
Wei, Z.1
Li, H.2
-
40
-
-
33750415038
-
SBML-PET: a Systems Biology Markup Language-based parameter estimation tool
-
Zi, Z. and Klipp, E. (2006) SBML-PET: a Systems Biology Markup Language-based parameter estimation tool. Bioinformatics, 22, 2704-2705.
-
(2006)
Bioinformatics
, vol.22
, pp. 2704-2705
-
-
Zi, Z.1
Klipp, E.2
|