-
2
-
-
34047174559
-
A module of negative feedback regulators defines growth factor signaling
-
Amit I, Citri A, Shay T, Lu Y, Katz M, Zhang F, Tarcic G, Siwak D, Lahad J, Jacob-Hirsch J, Amariglio N, Vaisman N, Segal E, Rechavi G, Alon U, Mills GB, Domany E, Yarden Y (2007) A module of negative feedback regulators defines growth factor signaling. Nat Genet 39: 503-512
-
(2007)
Nat Genet
, vol.39
, pp. 503-512
-
-
Amit, I.1
Citri, A.2
Shay, T.3
Lu, Y.4
Katz, M.5
Zhang, F.6
Tarcic, G.7
Siwak, D.8
Lahad, J.9
Jacob-Hirsch, J.10
Amariglio, N.11
Vaisman, N.12
Segal, E.13
Rechavi, G.14
Alon, U.15
Mills, G.B.16
Domany, E.17
Yarden, Y.18
-
3
-
-
4544246088
-
Mathematical modeling reveals threshold mechanism in CD95-induced apoptosis
-
Bentele M, Lavrik I, Ulrich M, Stösser S, Heermann DW, Kalthoff H, Krammer PH, Eils R (2004) Mathematical modeling reveals threshold mechanism in CD95-induced apoptosis. J Cell Biol 166: 839-851
-
(2004)
J Cell Biol
, vol.166
, pp. 839-851
-
-
Bentele, M.1
Lavrik, I.2
Ulrich, M.3
Stösser, S.4
Heermann, D.W.5
Kalthoff, H.6
Krammer, P.H.7
Eils, R.8
-
5
-
-
36248988538
-
Ligand-dependent responses of the ErbB signaling network: Experimental and modeling analyses
-
Birtwistle MR, Hatakeyama M, Yumoto N, Ogunnaike BA, Hoek JB, Kholodenko BN (2007) Ligand-dependent responses of the ErbB signaling network: experimental and modeling analyses. Mol Syst Biol 3: 144
-
(2007)
Mol Syst Biol
, vol.3
, pp. 144
-
-
Birtwistle, M.R.1
Hatakeyama, M.2
Yumoto, N.3
Ogunnaike, B.A.4
Hoek, J.B.5
Kholodenko, B.N.6
-
6
-
-
10244219918
-
BioNetGen: Software for rule-based modeling of signal transduction based on the interactions of molecular domains
-
Blinov ML, Faeder JR, Goldstein B, Hlavacek WS (2004) BioNetGen: software for rule-based modeling of signal transduction based on the interactions of molecular domains. Bioinformatics 20: 3289-3291
-
(2004)
Bioinformatics
, vol.20
, pp. 3289-3291
-
-
Blinov, M.L.1
Faeder, J.R.2
Goldstein, B.3
Hlavacek, W.S.4
-
8
-
-
42749109054
-
Statistical mechanical approaches to models with many poorly known parameters
-
Brown KS, Sethna JP (2003) Statistical mechanical approaches to models with many poorly known parameters. Phys Rev 68 (2 Part 1): 021904
-
(2003)
Phys Rev
, vol.68
, Issue.2 PART 1
, pp. 021904
-
-
Brown, K.S.1
Sethna, J.P.2
-
9
-
-
33947245587
-
Neuregulin-induced ErbB3 downregulation is mediated by a protein stability cascade involving the E3 ubiquitin ligase Nrdp1
-
Cao Z, Wu X, Yen L, Sweeney C, Carraway III KL (2007) Neuregulin-induced ErbB3 downregulation is mediated by a protein stability cascade involving the E3 ubiquitin ligase Nrdp1. Mol Cell Biol 27: 2180-2188
-
(2007)
Mol Cell Biol
, vol.27
, pp. 2180-2188
-
-
Cao, Z.1
Wu, X.2
Yen, L.3
Sweeney, C.4
Carraway III, K.L.5
-
10
-
-
33748066632
-
Kinetic analysis of epidermal growth factor receptor somatic mutant proteins shows increased sensitivity to the epidermal growth factor receptor tyrosine kinase inhibitor, erlotinib
-
Carey KD, Garton AJ, Romero MS, Kahler J, Thomson S, Ross S, Park F, Haley JD, Gibson N, Sliwkowski MX (2006) Kinetic analysis of epidermal growth factor receptor somatic mutant proteins shows increased sensitivity to the epidermal growth factor receptor tyrosine kinase inhibitor, erlotinib. Cancer Res 66: 8163-8171
-
(2006)
Cancer Res
, vol.66
, pp. 8163-8171
-
-
Carey, K.D.1
Garton, A.J.2
Romero, M.S.3
Kahler, J.4
Thomson, S.5
Ross, S.6
Park, F.7
Haley, J.D.8
Gibson, N.9
Sliwkowski, M.X.10
-
11
-
-
0028335209
-
The erbB3 gene product is a receptor for heregulin
-
Carraway III KL, Sliwkowski MX, Akita R, Platko JV, Guy PM, Nuijens A, Diamonti AJ, Vandlen RL, Cantley LC, Cerione RA (1994) The erbB3 gene product is a receptor for heregulin. J Biol Chem 269: 14303-14306
-
(1994)
J Biol Chem
, vol.269
, pp. 14303-14306
-
-
Carraway III, K.L.1
Sliwkowski, M.X.2
Akita, R.3
Platko, J.V.4
Guy, P.M.5
Nuijens, A.6
Diamonti, A.J.7
Vandlen, R.L.8
Cantley, L.C.9
Cerione, R.A.10
-
12
-
-
31144454015
-
Error analysis and simulations of complex phenomena
-
Christie MA, Glimm J, Grove JW, Higdon DM, Sharp DH, Wood-Schultz MM (2005) Error analysis and simulations of complex phenomena. Los Alamos Sci 29: 6-25
-
(2005)
Los Alamos Sci
, vol.29
, pp. 6-25
-
-
Christie, M.A.1
Glimm, J.2
Grove, J.W.3
Higdon, D.M.4
Sharp, D.H.5
Wood-Schultz, M.M.6
-
13
-
-
33745828702
-
EGF-ERBB signalling: Towards the systems level
-
Citri A, Yarden Y (2006) EGF-ERBB signalling: towards the systems level. Nat Rev 7: 505-516
-
(2006)
Nat Rev
, vol.7
, pp. 505-516
-
-
Citri, A.1
Yarden, Y.2
-
14
-
-
84953649167
-
Study of the sensitivity of coupled reaction systems to uncertainties in rate coefficients
-
Cukier RI, Fortuin CM, Shuler KE, Petschek AG, Schaibly JH (1973) Study of the sensitivity of coupled reaction systems to uncertainties in rate coefficients. J Chem Phys 59: 3873-3878
-
(1973)
J Chem Phys
, vol.59
, pp. 3873-3878
-
-
Cukier, R.I.1
Fortuin, C.M.2
Shuler, K.E.3
Petschek, A.G.4
Schaibly, J.H.5
-
15
-
-
38149083357
-
Rule-based modeling of cellular signaling
-
Hutchinson D, Kanade T eds, Heidelberg: Springer Berlin
-
Danos V, Feret J, Fontana W, Harmer R, Krivine J (2007) Rule-based modeling of cellular signaling. In Lecture Notes in Computer Science: Concurrency Theory, Hutchinson D, Kanade T (eds), Vol. 4703, pp 17-41. Heidelberg: Springer Berlin
-
(2007)
Lecture Notes in Computer Science: Concurrency Theory
, vol.4703
, pp. 17-41
-
-
Danos, V.1
Feret, J.2
Fontana, W.3
Harmer, R.4
Krivine, J.5
-
17
-
-
34249075147
-
MET amplification leads to gefitinib resistance in lung cancer by activating ERBB3 signaling
-
Engelman JA, Zejnullahu K, Mitsudomi T, Song Y, Hyland C, Park JO, Lindeman N, Gale CM, Zhao X, Christensen J, Kosaka T, Holmes AJ, Rogers AM, Cappuzzo F, Mok T, Lee C, Johnson BE, Cantley LC, Jänne PA (2007) MET amplification leads to gefitinib resistance in lung cancer by activating ERBB3 signaling. Science 316: 1039-1043
-
(2007)
Science
, vol.316
, pp. 1039-1043
-
-
Engelman, J.A.1
Zejnullahu, K.2
Mitsudomi, T.3
Song, Y.4
Hyland, C.5
Park, J.O.6
Lindeman, N.7
Gale, C.M.8
Zhao, X.9
Christensen, J.10
Kosaka, T.11
Holmes, A.J.12
Rogers, A.M.13
Cappuzzo, F.14
Mok, T.15
Lee, C.16
Johnson, B.E.17
Cantley, L.C.18
Jänne, P.A.19
-
18
-
-
0027411585
-
-
Felder S, Zhou M, Hu P, Ureña J, Ullrich A, Chaudhuri M, White M, Shoelson SE, Schlessinger J (1993) SH2 domains exhibit high-affinity binding to tyrosine-phosphorylated peptides yet also exhibit rapid dissociation and exchange. Mol Cell Biol 13: 1449-1455
-
Felder S, Zhou M, Hu P, Ureña J, Ullrich A, Chaudhuri M, White M, Shoelson SE, Schlessinger J (1993) SH2 domains exhibit high-affinity binding to tyrosine-phosphorylated peptides yet also exhibit rapid dissociation and exchange. Mol Cell Biol 13: 1449-1455
-
-
-
-
19
-
-
0032496358
-
The biochemical basis of an all-or-none cell fate switch in Xenopus oocytes
-
Ferrell Jr JE, Machleder EM (1998) The biochemical basis of an all-or-none cell fate switch in Xenopus oocytes. Science 280: 895-898
-
(1998)
Science
, vol.280
, pp. 895-898
-
-
Ferrell Jr, J.E.1
Machleder, E.M.2
-
20
-
-
0029010607
-
Oligomerization of epidermal growth factor receptors on A431 cells studied by time-resolved fluorescence imaging microscopy. A stereochemical model for tyrosine kinase receptor activation
-
Gadella Jr TW, Jovin TM (1995) Oligomerization of epidermal growth factor receptors on A431 cells studied by time-resolved fluorescence imaging microscopy. A stereochemical model for tyrosine kinase receptor activation. J Cell Biol 129: 1543-1558
-
(1995)
J Cell Biol
, vol.129
, pp. 1543-1558
-
-
Gadella Jr, T.W.1
Jovin, T.M.2
-
21
-
-
0021715523
-
Ultrasensitivity in biochemical systems controlled by covalent modification. Interplay between zero-order and multistep effects
-
Goldbeter A, Koshland Jr DE (1984) Ultrasensitivity in biochemical systems controlled by covalent modification. Interplay between zero-order and multistep effects. J Biol Chem 259: 14441-14447
-
(1984)
J Biol Chem
, vol.259
, pp. 14441-14447
-
-
Goldbeter, A.1
Koshland Jr, D.E.2
-
22
-
-
33847314052
-
Parameter estimation using simulated annealing for S-system models of biochemical networks
-
Gonzalez OR, Küper C, Jung K, Naval Jr PC, Mendoza E (2007) Parameter estimation using simulated annealing for S-system models of biochemical networks. Bioinformatics 23: 480-486
-
(2007)
Bioinformatics
, vol.23
, pp. 480-486
-
-
Gonzalez, O.R.1
Küper, C.2
Jung, K.3
Naval Jr, P.C.4
Mendoza, E.5
-
23
-
-
0030944455
-
ErbB-2, the preferred heterodimerization partner of all ErbB receptors, is a mediator of lateral signaling
-
Graus-Porta D, Beerli RR, Daly JM, Hynes NE (1997) ErbB-2, the preferred heterodimerization partner of all ErbB receptors, is a mediator of lateral signaling. EMBO J 16: 1647-1655
-
(1997)
EMBO J
, vol.16
, pp. 1647-1655
-
-
Graus-Porta, D.1
Beerli, R.R.2
Daly, J.M.3
Hynes, N.E.4
-
24
-
-
35748977901
-
Universally sloppy parameter sensitivities in systems biology models
-
Gutenkunst RN, Waterfall JJ, Casey FP, Brown KS, Myers CR, Sethna JP (2007) Universally sloppy parameter sensitivities in systems biology models. PLoS Comput Biol 3: 1871-1878
-
(2007)
PLoS Comput Biol
, vol.3
, pp. 1871-1878
-
-
Gutenkunst, R.N.1
Waterfall, J.J.2
Casey, F.P.3
Brown, K.S.4
Myers, C.R.5
Sethna, J.P.6
-
25
-
-
0028168569
-
Insect cell-expressed p180erbB3 possesses an impaired tyrosine kinase activity
-
Guy PM, Platko JV, Cantley LC, Cerione RA, Carraway III KL (1994) Insect cell-expressed p180erbB3 possesses an impaired tyrosine kinase activity. Proc Natl Acad Sci USA 91: 8132-8136
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 8132-8136
-
-
Guy, P.M.1
Platko, J.V.2
Cantley, L.C.3
Cerione, R.A.4
Carraway III, K.L.5
-
26
-
-
0041344538
-
A computational model on the modulation of mitogen-activated protein kinase (MAPK) and Akt pathways in heregulin-induced ErbB signalling
-
Hatakeyama M, Kimura S, Naka T, Kawasaki T, Yumoto N, Ichikawa M, Kim JH, Saito K, Saeki M, Shirouzu M, Yokoyama S, Konagaya A (2003) A computational model on the modulation of mitogen-activated protein kinase (MAPK) and Akt pathways in heregulin-induced ErbB signalling. Biochem J 373 (Part 2): 451-463
-
(2003)
Biochem J
, vol.373
, Issue.PART 2
, pp. 451-463
-
-
Hatakeyama, M.1
Kimura, S.2
Naka, T.3
Kawasaki, T.4
Yumoto, N.5
Ichikawa, M.6
Kim, J.H.7
Saito, K.8
Saeki, M.9
Shirouzu, M.10
Yokoyama, S.11
Konagaya, A.12
-
27
-
-
0036285634
-
Mathematical models of protein kinase signal transduction
-
Heinrich R, Neel BG, Rapoport TA (2002) Mathematical models of protein kinase signal transduction. Mol cell 9: 957-970
-
(2002)
Mol cell
, vol.9
, pp. 957-970
-
-
Heinrich, R.1
Neel, B.G.2
Rapoport, T.A.3
-
28
-
-
14044276994
-
Parsing ERK activation reveals quantitatively equivalent contributions from epidermal growth factor receptor and HER2 in human mammary epithelial cells
-
Hendriks BS, Orr G, Wells A, Wiley HS, Lauffenburger DA (2005) Parsing ERK activation reveals quantitatively equivalent contributions from epidermal growth factor receptor and HER2 in human mammary epithelial cells. J Biol Chem 280: 6157-6169
-
(2005)
J Biol Chem
, vol.280
, pp. 6157-6169
-
-
Hendriks, B.S.1
Orr, G.2
Wells, A.3
Wiley, H.S.4
Lauffenburger, D.A.5
-
29
-
-
0037931402
-
Quantitative analysis of HER2-mediated effects on HER2 and epidermal growth factor receptor endocytosis: Distribution of homo- and heterodimers depends on relative HER2 levels
-
Hendriks BS, Opresko LK, Wiley HS, Lauffenburger D (2003) Quantitative analysis of HER2-mediated effects on HER2 and epidermal growth factor receptor endocytosis: distribution of homo- and heterodimers depends on relative HER2 levels. J Biol Chem 278: 23343-23351
-
(2003)
J Biol Chem
, vol.278
, pp. 23343-23351
-
-
Hendriks, B.S.1
Opresko, L.K.2
Wiley, H.S.3
Lauffenburger, D.4
-
30
-
-
35748931160
-
Data-based identifiability analysis of non-linear dynamical models
-
Hengl S, Kreutz C, Timmer J, Maiwald T (2007) Data-based identifiability analysis of non-linear dynamical models. Bioinformatics 23: 2612-2618
-
(2007)
Bioinformatics
, vol.23
, pp. 2612-2618
-
-
Hengl, S.1
Kreutz, C.2
Timmer, J.3
Maiwald, T.4
-
31
-
-
0346502078
-
The complexity of complexes in signal transduction
-
Hlavacek WS, Faeder JR, Blinov ML, Perelson AS, Goldstein B (2003) The complexity of complexes in signal transduction. Biotechnol Bioeng 84: 783-794
-
(2003)
Biotechnol Bioeng
, vol.84
, pp. 783-794
-
-
Hlavacek, W.S.1
Faeder, J.R.2
Blinov, M.L.3
Perelson, A.S.4
Goldstein, B.5
-
32
-
-
0029790351
-
Ultrasensitivity in the mitogen-activated protein kinase cascade
-
Huang CY, Ferrell Jr JE (1996) Ultrasensitivity in the mitogen-activated protein kinase cascade. Proc Natl Acad Sci USA 93: 10078-10083
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 10078-10083
-
-
Huang, C.Y.1
Ferrell Jr, J.E.2
-
33
-
-
3142517462
-
Topology and robustness in the Drosophila segment polarity network
-
Ingolia NT (2004) Topology and robustness in the Drosophila segment polarity network. PLoS Biol 2: e123
-
(2004)
PLoS Biol
, vol.2
-
-
Ingolia, N.T.1
-
34
-
-
30544449081
-
A quantitative protein interaction network for the ErbB receptors using protein microarrays
-
Jones RB, Gordus A, Krall JA, MacBeath G (2006) A quantitative protein interaction network for the ErbB receptors using protein microarrays. Nature 439: 168-174
-
(2006)
Nature
, vol.439
, pp. 168-174
-
-
Jones, R.B.1
Gordus, A.2
Krall, J.A.3
MacBeath, G.4
-
35
-
-
0033570090
-
Quantification of short term signaling by the epidermal growth factor receptor
-
Kholodenko BN, Demin OV, Moehren G, Hoek JB (1999) Quantification of short term signaling by the epidermal growth factor receptor. J Biol Chem 274: 30169-30181
-
(1999)
J Biol Chem
, vol.274
, pp. 30169-30181
-
-
Kholodenko, B.N.1
Demin, O.V.2
Moehren, G.3
Hoek, J.B.4
-
37
-
-
0033608993
-
The ErbB-2/HER2 oncoprotein of human carcinomas may function solely as a shared coreceptor for multiple stroma-derived growth factors
-
Klapper LN, Glathe S, Vaisman N, Hynes NE, Andrews GC, Sela M, Yarden Y (1999) The ErbB-2/HER2 oncoprotein of human carcinomas may function solely as a shared coreceptor for multiple stroma-derived growth factors. Proc Natl Acad Sci USA 96: 4995-5000
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 4995-5000
-
-
Klapper, L.N.1
Glathe, S.2
Vaisman, N.3
Hynes, N.E.4
Andrews, G.C.5
Sela, M.6
Yarden, Y.7
-
38
-
-
34948840834
-
Ensemble modeling for analysis of cell signaling dynamics
-
Kuepfer L, Peter M, Sauer U, Stelling J (2007) Ensemble modeling for analysis of cell signaling dynamics. Nat Biotechnol 25: 8503-8511
-
(2007)
Nat Biotechnol
, vol.25
, pp. 8503-8511
-
-
Kuepfer, L.1
Peter, M.2
Sauer, U.3
Stelling, J.4
-
39
-
-
0034713838
-
Heregulin reverses the oligomerization of HER3
-
Landgraf R, Eisenberg D (2000) Heregulin reverses the oligomerization of HER3. Biochemistry 39: 8503-8511
-
(2000)
Biochemistry
, vol.39
, pp. 8503-8511
-
-
Landgraf, R.1
Eisenberg, D.2
-
40
-
-
34547570814
-
Sensitivity analysis of intracellular signaling pathway kinetics predicts targets for stem cell fate control
-
Mahdavi A, Davey RE, Bhola P, Yin T, Zandstra PW (2007) Sensitivity analysis of intracellular signaling pathway kinetics predicts targets for stem cell fate control. PLoS Comput Biol 3: e130
-
(2007)
PLoS Comput Biol
, vol.3
-
-
Mahdavi, A.1
Davey, R.E.2
Bhola, P.3
Yin, T.4
Zandstra, P.W.5
-
41
-
-
0034759097
-
Differential algebra methods for the study of the structural identifiability of rational function state-space models in the biosciences
-
Margaria G, Riccomagno E, Chappell MJ, Wynn HP (2001) Differential algebra methods for the study of the structural identifiability of rational function state-space models in the biosciences. Math Biosci 174: 1-26
-
(2001)
Math Biosci
, vol.174
, pp. 1-26
-
-
Margaria, G.1
Riccomagno, E.2
Chappell, M.J.3
Wynn, H.P.4
-
42
-
-
0000169232
-
An algorithm for least-squares estimation of nonlinear parameters
-
Marquardt D (1963) An algorithm for least-squares estimation of nonlinear parameters. SIAM J Appl Math 11: 431-441
-
(1963)
SIAM J Appl Math
, vol.11
, pp. 431-441
-
-
Marquardt, D.1
-
43
-
-
33845424529
-
A rate equation approach to elucidate the kinetics and robustness of the TGF-beta pathway
-
Melke P, Jönsson H, Pardali E, ten Dijke P, Peterson C (2006) A rate equation approach to elucidate the kinetics and robustness of the TGF-beta pathway. Biophys J 91: 4368-4380
-
(2006)
Biophys J
, vol.91
, pp. 4368-4380
-
-
Melke, P.1
Jönsson, H.2
Pardali, E.3
ten Dijke, P.4
Peterson, C.5
-
44
-
-
0036301511
-
Robustness as a measure of plausibility in models of biochemical networks
-
Morohashi M, Winn AE, Borisuk MT, Bolouri H, Doyle J, Kitano H (2002) Robustness as a measure of plausibility in models of biochemical networks. J Theor Biol 216: 19-30
-
(2002)
J Theor Biol
, vol.216
, pp. 19-30
-
-
Morohashi, M.1
Winn, A.E.2
Borisuk, M.T.3
Bolouri, H.4
Doyle, J.5
Kitano, H.6
-
45
-
-
33947287270
-
Epidermal growth factor receptor mutants from human lung cancers exhibit enhanced catalytic activity and increased sensitivity to gefitinib
-
Mulloy R, Ferrand A, Kim Y, Sordella R, Bell DW, Haber DA, Anderson KS, Settleman J (2007) Epidermal growth factor receptor mutants from human lung cancers exhibit enhanced catalytic activity and increased sensitivity to gefitinib. Cancer Res 67: 2325-2330
-
(2007)
Cancer Res
, vol.67
, pp. 2325-2330
-
-
Mulloy, R.1
Ferrand, A.2
Kim, Y.3
Sordella, R.4
Bell, D.W.5
Haber, D.A.6
Anderson, K.S.7
Settleman, J.8
-
46
-
-
0026607545
-
Kinetics of protein-protein association explained by Brownian dynamics computer simulation
-
Northrup SH, Erickson HP (1992) Kinetics of protein-protein association explained by Brownian dynamics computer simulation. Proc Natl Acad Sci USA 89: 3338-3342
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 3338-3342
-
-
Northrup, S.H.1
Erickson, H.P.2
-
47
-
-
2642570481
-
Sensitivity to gefitinib (Iressa, ZD1839) in non-small cell lung cancer cell lines correlates with dependence on the epidermal growth factor (EGF) receptor/extracellular signal-regulated kinase 1/2 and EGF receptor/Akt pathway for proliferation
-
KuwanoM
-
Ono M, Hirata A, Kometani T, Miyagawa M, Ueda S, Kinoshita H, Fujii T, KuwanoM(2004) Sensitivity to gefitinib (Iressa, ZD1839) in non-small cell lung cancer cell lines correlates with dependence on the epidermal growth factor (EGF) receptor/extracellular signal-regulated kinase 1/2 and EGF receptor/Akt pathway for proliferation. Mol Cancer Ther 3: 465-472
-
(2004)
Mol Cancer Ther
, vol.3
, pp. 465-472
-
-
Ono, M.1
Hirata, A.2
Kometani, T.3
Miyagawa, M.4
Ueda, S.5
Kinoshita, H.6
Fujii, T.7
-
48
-
-
2342624080
-
EGFR mutations in lung cancer: Correlation with clinical response to gefitinib therapy
-
Paez JG, Jänne PA, Lee JC, Tracy S, Greulich H, Gabriel S, Herman P, Kaye FJ, Lindeman N, Boggon TJ, Naoki K, Sasaki H, Fujii Y, Eck MJ, Sellers WR, Johnson BE, Meyerson M (2004) EGFR mutations in lung cancer: correlation with clinical response to gefitinib therapy. Science 304: 1497-1500
-
(2004)
Science
, vol.304
, pp. 1497-1500
-
-
Paez, J.G.1
Jänne, P.A.2
Lee, J.C.3
Tracy, S.4
Greulich, H.5
Gabriel, S.6
Herman, P.7
Kaye, F.J.8
Lindeman, N.9
Boggon, T.J.10
Naoki, K.11
Sasaki, H.12
Fujii, Y.13
Eck, M.J.14
Sellers, W.R.15
Johnson, B.E.16
Meyerson, M.17
-
49
-
-
0026776424
-
Isolation of the neu/HER-2 stimulatory ligand: A 44 kd glycoprotein that induces differentiation of mammary tumor cells
-
Peles E, Bacus SS, Koski RA, Lu HS, Wen D, Ogden SG, Levy RB, Yarden Y (1992) Isolation of the neu/HER-2 stimulatory ligand: a 44 kd glycoprotein that induces differentiation of mammary tumor cells. Cell 69: 205-216
-
(1992)
Cell
, vol.69
, pp. 205-216
-
-
Peles, E.1
Bacus, S.S.2
Koski, R.A.3
Lu, H.S.4
Wen, D.5
Ogden, S.G.6
Levy, R.B.7
Yarden, Y.8
-
50
-
-
0041843750
-
An integrated model of epidermal growth factor receptor trafficking and signal transduction
-
Resat H, Ewald JA, Dixon DA, Wiley HS (2003) An integrated model of epidermal growth factor receptor trafficking and signal transduction. Biophys J 85: 730-743
-
(2003)
Biophys J
, vol.85
, pp. 730-743
-
-
Resat, H.1
Ewald, J.A.2
Dixon, D.A.3
Wiley, H.S.4
-
51
-
-
32044474451
-
A hybrid approach for efficient and robust parameter estimation in biochemical pathways
-
Rodriguez-Fernandez M, Mendes P, Banga JR (2006) A hybrid approach for efficient and robust parameter estimation in biochemical pathways. Biosystems 83: 248-265
-
(2006)
Biosystems
, vol.83
, pp. 248-265
-
-
Rodriguez-Fernandez, M.1
Mendes, P.2
Banga, J.R.3
-
52
-
-
0027159063
-
Differential expression of the epidermal growth factor receptor and its ligands in primary non-small cell lung cancers and adjacent benign lung
-
Rusch V, Baselga J, Cordon-Cardo C, Orazem J, Zaman M, Hoda S, McIntosh J, Kurie J, Dmitrovsky E (1993) Differential expression of the epidermal growth factor receptor and its ligands in primary non-small cell lung cancers and adjacent benign lung. Cancer Res 53 (10 Suppl): 2379-2385
-
(1993)
Cancer Res
, vol.53
, Issue.10 SUPPL.
, pp. 2379-2385
-
-
Rusch, V.1
Baselga, J.2
Cordon-Cardo, C.3
Orazem, J.4
Zaman, M.5
Hoda, S.6
McIntosh, J.7
Kurie, J.8
Dmitrovsky, E.9
-
53
-
-
3442878412
-
Modular analysis of signal transduction networks
-
Saez-Rodriguez J, Kremling A, Conzelmann H, Bettenbrock K, Gilles ED (2004) Modular analysis of signal transduction networks. IEEE Contr Sys Mag 24: 35-52
-
(2004)
IEEE Contr Sys Mag
, vol.24
, pp. 35-52
-
-
Saez-Rodriguez, J.1
Kremling, A.2
Conzelmann, H.3
Bettenbrock, K.4
Gilles, E.D.5
-
54
-
-
17344362384
-
Prediction and validation of the distinct dynamics of transient and sustained ERK activation
-
Sasagawa S, Ozaki Y, Fujita K, Kuroda S (2005) Prediction and validation of the distinct dynamics of transient and sustained ERK activation. Nat Cell Biol 7: 365-373
-
(2005)
Nat Cell Biol
, vol.7
, pp. 365-373
-
-
Sasagawa, S.1
Ozaki, Y.2
Fujita, K.3
Kuroda, S.4
-
55
-
-
0028825182
-
Quantitative analysis of Grb2-Sos1 interaction: The N-terminal SH3 domain of Grb2 mediates affinity
-
Sastry L, Lin W, Wong WT, Di Fiore PP, Scoppa CA, King CR (1995) Quantitative analysis of Grb2-Sos1 interaction: the N-terminal SH3 domain of Grb2 mediates affinity. Oncogene 11: 1107-1112
-
(1995)
Oncogene
, vol.11
, pp. 1107-1112
-
-
Sastry, L.1
Lin, W.2
Wong, W.T.3
Di Fiore, P.P.4
Scoppa, C.A.5
King, C.R.6
-
56
-
-
2442543316
-
Reaction kinetics in intracellular environments with macromolecular crowding: Simulations and rate laws
-
Schnell S, Turner TE (2004) Reaction kinetics in intracellular environments with macromolecular crowding: simulations and rate laws. Prog Biophys Mol Biol 85: 235-260
-
(2004)
Prog Biophys Mol Biol
, vol.85
, pp. 235-260
-
-
Schnell, S.1
Turner, T.E.2
-
57
-
-
0036212767
-
Computational modeling of the dynamics of the MAP kinase cascade activated by surface and internalized EGF receptors
-
Schoeberl B, Eichler-Jonsson C, Gilles ED, Muller G (2002) Computational modeling of the dynamics of the MAP kinase cascade activated by surface and internalized EGF receptors. Nat Biotechnol 20: 370-375
-
(2002)
Nat Biotechnol
, vol.20
, pp. 370-375
-
-
Schoeberl, B.1
Eichler-Jonsson, C.2
Gilles, E.D.3
Muller, G.4
-
58
-
-
33746905531
-
Phosphotyrosine interactome of the ErbB-receptor kinase family
-
Schulze WX, Deng L, Mann M (2005) Phosphotyrosine interactome of the ErbB-receptor kinase family. Mol Syst Biol 1: 0008
-
(2005)
Mol Syst Biol
, vol.1
, pp. 0008
-
-
Schulze, W.X.1
Deng, L.2
Mann, M.3
-
59
-
-
0037007096
-
Actions of PP2A on the MAP kinase pathway and apoptosis are mediated by distinct regulatory subunits
-
Silverstein AM, Barrow CA, Davis AJ, Mumby MC (2002) Actions of PP2A on the MAP kinase pathway and apoptosis are mediated by distinct regulatory subunits. Proc Natl Acad Sci USA 99: 4221-4226
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 4221-4226
-
-
Silverstein, A.M.1
Barrow, C.A.2
Davis, A.J.3
Mumby, M.C.4
-
60
-
-
33644509534
-
Global dynamic optimization for parameter estimation in chemical kinetics
-
Singer AB, Taylor JW, Barton PI, Green WH (2006) Global dynamic optimization for parameter estimation in chemical kinetics. J Phys Chem 110: 971-976
-
(2006)
J Phys Chem
, vol.110
, pp. 971-976
-
-
Singer, A.B.1
Taylor, J.W.2
Barton, P.I.3
Green, W.H.4
-
61
-
-
37049183697
-
Human breast cancer: Correlation of relapse and survival with amplification of the HER-2/neu oncogene
-
Slamon DJ, Clark GM, Wong SG, Levin WJ, Ullrich A, McGuire WL (1987) Human breast cancer: correlation of relapse and survival with amplification of the HER-2/neu oncogene. Science 235: 177-182
-
(1987)
Science
, vol.235
, pp. 177-182
-
-
Slamon, D.J.1
Clark, G.M.2
Wong, S.G.3
Levin, W.J.4
Ullrich, A.5
McGuire, W.L.6
-
62
-
-
0035869407
-
Use of chemotherapy plus a monoclonal antibody against HER2 for metastatic breast cancer that overexpresses HER2
-
Slamon DJ, Leyland-Jones B, Shak S, Fuchs H, Paton V, Bajamonde A, Fleming T, Eiermann W, Wolter J, Pegram M, Baselga J, Norton L (2001) Use of chemotherapy plus a monoclonal antibody against HER2 for metastatic breast cancer that overexpresses HER2. N Engl J Med 344: 783-792
-
(2001)
N Engl J Med
, vol.344
, pp. 783-792
-
-
Slamon, D.J.1
Leyland-Jones, B.2
Shak, S.3
Fuchs, H.4
Paton, V.5
Bajamonde, A.6
Fleming, T.7
Eiermann, W.8
Wolter, J.9
Pegram, M.10
Baselga, J.11
Norton, L.12
-
63
-
-
4143066760
-
Gefitinib-sensitizing EGFR mutations in lung cancer activate anti-apoptotic pathways
-
Sordella R, Bell DW, Haber DA, Settleman J (2004) Gefitinib-sensitizing EGFR mutations in lung cancer activate anti-apoptotic pathways. Science 305: 1163-1167
-
(2004)
Science
, vol.305
, pp. 1163-1167
-
-
Sordella, R.1
Bell, D.W.2
Haber, D.A.3
Settleman, J.4
-
65
-
-
5644293135
-
Gefitinib induces apoptosis in the EGFRL858R non-small-ell lung cancer cell line H3255
-
Tracy S, Mukohara T, Hansen M, Meyerson M, Johnson BE, Jänne PA (2004) Gefitinib induces apoptosis in the EGFRL858R non-small-ell lung cancer cell line H3255. Cancer Res 64: 7241-7244
-
(2004)
Cancer Res
, vol.64
, pp. 7241-7244
-
-
Tracy, S.1
Mukohara, T.2
Hansen, M.3
Meyerson, M.4
Johnson, B.E.5
Jänne, P.A.6
-
66
-
-
0036122481
-
Protein phosphatase 2A forms a molecular complex with Shc and regulates Shc tyrosine phosphorylation and downstream mitogenic signaling
-
Ugi S, Imamura T, Ricketts W, Olefsky JM (2002) Protein phosphatase 2A forms a molecular complex with Shc and regulates Shc tyrosine phosphorylation and downstream mitogenic signaling. Mol Cell Biol 22: 2375-2387
-
(2002)
Mol Cell Biol
, vol.22
, pp. 2375-2387
-
-
Ugi, S.1
Imamura, T.2
Ricketts, W.3
Olefsky, J.M.4
-
67
-
-
33845410054
-
Dynamic modelling and analysis of biochemical networks: Mechanism-based models and model-based experiments
-
van Riel NA (2006) Dynamic modelling and analysis of biochemical networks: mechanism-based models and model-based experiments. Brief Bioinformatics 7: 364-374
-
(2006)
Brief Bioinformatics
, vol.7
, pp. 364-374
-
-
van Riel, N.A.1
-
68
-
-
0034644270
-
The segment polarity network is a robust developmental module
-
von Dassow G, Meir E, Munro EM, Odell GM (2000) The segment polarity network is a robust developmental module. Nature 406: 188-192
-
(2000)
Nature
, vol.406
, pp. 188-192
-
-
von Dassow, G.1
Meir, E.2
Munro, E.M.3
Odell, G.M.4
-
69
-
-
40749094910
-
Bayesian ranking of biochemical system models
-
Vyshemirsky V, Girolami MA (2008) Bayesian ranking of biochemical system models. Bioinformatics 24: 833-839
-
(2008)
Bioinformatics
, vol.24
, pp. 833-839
-
-
Vyshemirsky, V.1
Girolami, M.A.2
-
70
-
-
0035671987
-
The structural identifiability and parameter estimation of a multispecies model for the transmission of mastitis in dairy cows
-
White LJ, Evans ND, Lam TJ, Schukken YH, Medley GF, Godfrey KR, Chappell MJ (2001) The structural identifiability and parameter estimation of a multispecies model for the transmission of mastitis in dairy cows. Math Biosci 174: 77-90
-
(2001)
Math Biosci
, vol.174
, pp. 77-90
-
-
White, L.J.1
Evans, N.D.2
Lam, T.J.3
Schukken, Y.H.4
Medley, G.F.5
Godfrey, K.R.6
Chappell, M.J.7
-
71
-
-
0035256698
-
Untangling the ErbB signalling network
-
Yarden Y, Sliwkowski MX (2001) Untangling the ErbB signalling network. Nat Rev 2: 127-137
-
(2001)
Nat Rev
, vol.2
, pp. 127-137
-
-
Yarden, Y.1
Sliwkowski, M.X.2
-
72
-
-
33847406095
-
Structures of lung cancer-derived EGFR mutants and inhibitor complexes: Mechanism of activation and insights into differential inhibitor sensitivity
-
Yun CH, Boggon TJ, Li Y, Woo MS, Greulich H, Meyerson M, Eck MJ (2007) Structures of lung cancer-derived EGFR mutants and inhibitor complexes: mechanism of activation and insights into differential inhibitor sensitivity. Cancer cell 11: 217-227
-
(2007)
Cancer cell
, vol.11
, pp. 217-227
-
-
Yun, C.H.1
Boggon, T.J.2
Li, Y.3
Woo, M.S.4
Greulich, H.5
Meyerson, M.6
Eck, M.J.7
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