-
1
-
-
0032489015
-
The cell as a collection of protein machines: preparing the next generation of molecular biologists
-
Alberts B. The cell as a collection of protein machines: preparing the next generation of molecular biologists. Cell 92 (1998) 291-294
-
(1998)
Cell
, vol.92
, pp. 291-294
-
-
Alberts, B.1
-
3
-
-
34547878369
-
New directions in single-molecule imaging and analysis
-
Moerner W.E. New directions in single-molecule imaging and analysis. Proc Natl Acad Sci U S A 104 (2007) 12596-12602
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 12596-12602
-
-
Moerner, W.E.1
-
4
-
-
33947517676
-
A survey of single-molecule techniques in chemical biology
-
Cornish P.V., and Ha T. A survey of single-molecule techniques in chemical biology. ACS Chem Biol 2 (2007) 53-61
-
(2007)
ACS Chem Biol
, vol.2
, pp. 53-61
-
-
Cornish, P.V.1
Ha, T.2
-
5
-
-
36348946234
-
Single-molecule biophysics: at the interface of biology, physics and chemistry
-
Deniz A.A., Mukhopadhyay S., and Lemke E.A. Single-molecule biophysics: at the interface of biology, physics and chemistry. J R Soc Interface 5 (2008) 15-45
-
(2008)
J R Soc Interface
, vol.5
, pp. 15-45
-
-
Deniz, A.A.1
Mukhopadhyay, S.2
Lemke, E.A.3
-
6
-
-
36749083505
-
Illuminating the mechanistic roles of enzyme conformational dynamics
-
Hanson J.A., Duderstadt K., Watkins L.P., Bhattacharyya S., and Yang H. Illuminating the mechanistic roles of enzyme conformational dynamics. Proc Natl Acad Sci U S A 104 (2007) 18055-18060
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 18055-18060
-
-
Hanson, J.A.1
Duderstadt, K.2
Watkins, L.P.3
Bhattacharyya, S.4
Yang, H.5
-
7
-
-
44449103347
-
-
Selvin P.R., and Ha T. (Eds), Cold Spring Harbor Laboratory Press, New York. A compendium of how-to manuals for single-molecule imaging for a variety of topics, written in a style that will be understandable by non-specialists.
-
In: Selvin P.R., and Ha T. (Eds). Single-Molecule Techniques: A Laboratory Manual (2008), Cold Spring Harbor Laboratory Press, New York. A compendium of how-to manuals for single-molecule imaging for a variety of topics, written in a style that will be understandable by non-specialists.
-
(2008)
Single-Molecule Techniques: A Laboratory Manual
-
-
-
8
-
-
34548644787
-
Studying individual events in biology
-
A careful analysis of the advantages for studying individual events in biology. It also points out important caveats that one should consider when interpreting results of cellular studies.
-
Wennmalm S., and Simon S.M. Studying individual events in biology. Annu Rev Biochem 76 (2007) 419-446. A careful analysis of the advantages for studying individual events in biology. It also points out important caveats that one should consider when interpreting results of cellular studies.
-
(2007)
Annu Rev Biochem
, vol.76
, pp. 419-446
-
-
Wennmalm, S.1
Simon, S.M.2
-
9
-
-
48249095613
-
Single-molecule approach to molecular biology in living bacterial cells
-
Xie X.S., Choi P.J., Li G.W., Lee N.K., and Lia G. Single-molecule approach to molecular biology in living bacterial cells. Ann Rev Biophys 37 (2008) 417-444
-
(2008)
Ann Rev Biophys
, vol.37
, pp. 417-444
-
-
Xie, X.S.1
Choi, P.J.2
Li, G.W.3
Lee, N.K.4
Lia, G.5
-
10
-
-
34547887691
-
Biological applications of quantum dots
-
Jamieson T., Bakhshi R., Petrova D., Pocock R., Imani M., and Seifalian A.M. Biological applications of quantum dots. Biomaterials 28 (2007) 4717-4732
-
(2007)
Biomaterials
, vol.28
, pp. 4717-4732
-
-
Jamieson, T.1
Bakhshi, R.2
Petrova, D.3
Pocock, R.4
Imani, M.5
Seifalian, A.M.6
-
11
-
-
46749091612
-
Bioconjugated quantum dots for in vivo molecular and cellular imaging
-
Smith A.M., Duan H.W., Mohs A.M., and Nie S.M. Bioconjugated quantum dots for in vivo molecular and cellular imaging. Adv Drug Deliv Rev 60 (2008) 1226-1240
-
(2008)
Adv Drug Deliv Rev
, vol.60
, pp. 1226-1240
-
-
Smith, A.M.1
Duan, H.W.2
Mohs, A.M.3
Nie, S.M.4
-
12
-
-
50849104529
-
Quantum dots versus organic dyes as fluorescent labels
-
A comprehensive analysis of the usefulness and limitations of quantum dots and organic dyes in various types of applications.
-
Resch-Genger U., Grabolle M., Cavaliere-Jaricot S., Nitschke R., and Nann T. Quantum dots versus organic dyes as fluorescent labels. Nat Methods 5 (2008) 763-775. A comprehensive analysis of the usefulness and limitations of quantum dots and organic dyes in various types of applications.
-
(2008)
Nat Methods
, vol.5
, pp. 763-775
-
-
Resch-Genger, U.1
Grabolle, M.2
Cavaliere-Jaricot, S.3
Nitschke, R.4
Nann, T.5
-
13
-
-
38649101562
-
Compact biocompatible quantum dots functionalized for cellular imaging
-
Liu W., Howarth M., Greytak A.B., Zheng Y., Nocera D.G., Ting A.Y., and Bawendi M.G. Compact biocompatible quantum dots functionalized for cellular imaging. J Am Chem Soc 130 (2008) 1274-1284
-
(2008)
J Am Chem Soc
, vol.130
, pp. 1274-1284
-
-
Liu, W.1
Howarth, M.2
Greytak, A.B.3
Zheng, Y.4
Nocera, D.G.5
Ting, A.Y.6
Bawendi, M.G.7
-
14
-
-
42949085657
-
Monovalent, reduced-size quantum dots for imaging receptors on living cells
-
Howarth M., Liu W.H., Puthenveetil S., Zheng Y., Marshall L.F., Schmidt M.M., Wittrup K.D., Bawendi M.G., and Ting A.Y. Monovalent, reduced-size quantum dots for imaging receptors on living cells. Nat Methods 5 (2008) 397-399
-
(2008)
Nat Methods
, vol.5
, pp. 397-399
-
-
Howarth, M.1
Liu, W.H.2
Puthenveetil, S.3
Zheng, Y.4
Marshall, L.F.5
Schmidt, M.M.6
Wittrup, K.D.7
Bawendi, M.G.8
Ting, A.Y.9
-
16
-
-
66749153442
-
Non-blinking semiconductor nanocrystals
-
Wang X., Ren X., Kahen K., Hahn M.A., Rajeswaran M., Maccagnano-Zacher S., Silcox J., Cragg G.E., Efros A.L., and Krauss T.D. Non-blinking semiconductor nanocrystals. Nature 459 (2009) 686-689
-
(2009)
Nature
, vol.459
, pp. 686-689
-
-
Wang, X.1
Ren, X.2
Kahen, K.3
Hahn, M.A.4
Rajeswaran, M.5
Maccagnano-Zacher, S.6
Silcox, J.7
Cragg, G.E.8
Efros, A.L.9
Krauss, T.D.10
-
17
-
-
34247183157
-
Infrared-emitting colloidal nanocrystals: synthesis, assembly, spectroscopy, and applications
-
Rogach A.L., Eychmuller A., Hickey S.G., and Kershaw S.V. Infrared-emitting colloidal nanocrystals: synthesis, assembly, spectroscopy, and applications. Small 3 (2007) 536-557
-
(2007)
Small
, vol.3
, pp. 536-557
-
-
Rogach, A.L.1
Eychmuller, A.2
Hickey, S.G.3
Kershaw, S.V.4
-
18
-
-
38949102704
-
Imaging epidermal growth factor receptor expression in vivo: pharmacokinetic and biodistribution characterization of a bioconjugated quantum dot nanoprobe
-
Diagaradjane P., Orenstein-Cardona J.M., Colon-Casasnovas N.E., Deorukhkar A., Shentu S., Kuno N., Schwartz D.L., Gelovani J.G., and Krishnan S. Imaging epidermal growth factor receptor expression in vivo: pharmacokinetic and biodistribution characterization of a bioconjugated quantum dot nanoprobe. Clin Cancer Res 14 (2008) 731-741
-
(2008)
Clin Cancer Res
, vol.14
, pp. 731-741
-
-
Diagaradjane, P.1
Orenstein-Cardona, J.M.2
Colon-Casasnovas, N.E.3
Deorukhkar, A.4
Shentu, S.5
Kuno, N.6
Schwartz, D.L.7
Gelovani, J.G.8
Krishnan, S.9
-
20
-
-
42149179873
-
Oligonucleotide-stabilized Ag nanocluster fluorophores
-
Richards C.I., Choi S., Hsiang J.C., Antoku Y., Vosch T., Bongiorno A., Tzeng Y.L., and Dickson R.M. Oligonucleotide-stabilized Ag nanocluster fluorophores. J Am Chem Soc 130 (2008) 5038-5039
-
(2008)
J Am Chem Soc
, vol.130
, pp. 5038-5039
-
-
Richards, C.I.1
Choi, S.2
Hsiang, J.C.3
Antoku, Y.4
Vosch, T.5
Bongiorno, A.6
Tzeng, Y.L.7
Dickson, R.M.8
-
21
-
-
55649105178
-
Live cell surface labeling with fluorescent Ag nanocluster conjugates
-
Yu J.H., Choi S.M., Richards C.I., Antoku Y., and Dickson R.M. Live cell surface labeling with fluorescent Ag nanocluster conjugates. Photochem Photobiol 84 (2008) 1435-1439
-
(2008)
Photochem Photobiol
, vol.84
, pp. 1435-1439
-
-
Yu, J.H.1
Choi, S.M.2
Richards, C.I.3
Antoku, Y.4
Dickson, R.M.5
-
22
-
-
67949117053
-
Optically modulated fluorophores for selective fluorescence signal recovery
-
Richards C.I., Hsiang J.C., Senapati D., Patel S., Yu J.H., Vosch T., and Dickson R.M. Optically modulated fluorophores for selective fluorescence signal recovery. J Am Chem Soc 131 (2009) 4619-4621
-
(2009)
J Am Chem Soc
, vol.131
, pp. 4619-4621
-
-
Richards, C.I.1
Hsiang, J.C.2
Senapati, D.3
Patel, S.4
Yu, J.H.5
Vosch, T.6
Dickson, R.M.7
-
23
-
-
61949310394
-
Pyrenebutyrate-mediated delivery of quantum dots across the plasma membrane of living cells
-
Jablonski A.E., Humphries W.H., and Payne C.K. Pyrenebutyrate-mediated delivery of quantum dots across the plasma membrane of living cells. J Phys Chem B 113 (2009) 405-408
-
(2009)
J Phys Chem B
, vol.113
, pp. 405-408
-
-
Jablonski, A.E.1
Humphries, W.H.2
Payne, C.K.3
-
24
-
-
33646449795
-
Continuous distribution of emission intensity and its non-linear correlation to luminescence decay rates from single CdSe/ZnS quantum dots
-
Zhang K., Chang H., Fu A., Alivisatos A.P., and Yang H. Continuous distribution of emission intensity and its non-linear correlation to luminescence decay rates from single CdSe/ZnS quantum dots. Nano Lett 6 (2006) 843-847
-
(2006)
Nano Lett
, vol.6
, pp. 843-847
-
-
Zhang, K.1
Chang, H.2
Fu, A.3
Alivisatos, A.P.4
Yang, H.5
-
25
-
-
33645798851
-
Review-the fluorescent toolbox for assessing protein location and function
-
Giepmans B.N.G., Adams S.R., Ellisman M.H., and Tsien R.Y. Review-the fluorescent toolbox for assessing protein location and function. Science 312 (2006) 217-224
-
(2006)
Science
, vol.312
, pp. 217-224
-
-
Giepmans, B.N.G.1
Adams, S.R.2
Ellisman, M.H.3
Tsien, R.Y.4
-
26
-
-
34548839119
-
Chemical probes shed light on protein function
-
A survey on the strategies for tagging exogenous synthetic probesto specific proteins in cells, tabulating the sizes of the probe, the approaches, and known applications for selected methods.
-
O'Hare H.M., Johnsson K., and Gautier A. Chemical probes shed light on protein function. Curr Opin Struct Biol 17 (2007) 488-494. A survey on the strategies for tagging exogenous synthetic probesto specific proteins in cells, tabulating the sizes of the probe, the approaches, and known applications for selected methods.
-
(2007)
Curr Opin Struct Biol
, vol.17
, pp. 488-494
-
-
O'Hare, H.M.1
Johnsson, K.2
Gautier, A.3
-
27
-
-
0037225952
-
A general method for the covalent labeling of fusion proteins with small molecules in vivo
-
Keppler A., Gendreizig S., Gronemeyer T., Pick H., Vogel H., and Johnsson K. A general method for the covalent labeling of fusion proteins with small molecules in vivo. Nat Biotechnol 21 (2003) 86-89
-
(2003)
Nat Biotechnol
, vol.21
, pp. 86-89
-
-
Keppler, A.1
Gendreizig, S.2
Gronemeyer, T.3
Pick, H.4
Vogel, H.5
Johnsson, K.6
-
28
-
-
33745712857
-
Directed evolution of O-6-alkylguanine-DNA alkyltransferase for applications in protein labeling
-
Gronemeyer T., Chidley C., Juillerat A., Heinis C., and Johnsson K. Directed evolution of O-6-alkylguanine-DNA alkyltransferase for applications in protein labeling. Protein Eng Des Sel 19 (2006) 309-316
-
(2006)
Protein Eng Des Sel
, vol.19
, pp. 309-316
-
-
Gronemeyer, T.1
Chidley, C.2
Juillerat, A.3
Heinis, C.4
Johnsson, K.5
-
29
-
-
39149145486
-
An engineered protein tag for multiprotein labeling in living cells
-
Gautier A., Juillerat A., Heinis C., Correa I.R., Kindermann M., Beaufils F., and Johnsson K. An engineered protein tag for multiprotein labeling in living cells. Chem Biol 15 (2008) 128-136
-
(2008)
Chem Biol
, vol.15
, pp. 128-136
-
-
Gautier, A.1
Juillerat, A.2
Heinis, C.3
Correa, I.R.4
Kindermann, M.5
Beaufils, F.6
Johnsson, K.7
-
30
-
-
48049092838
-
HaloTag: a novel protein labeling technology for cell imaging and protein analysis
-
Los G.V., Encell L.P., McDougall M.G., Hartzell D.D., Karassina N., Zimprich C., Wood M.G., Learish R., Ohane R.F., Urh M., et al. HaloTag: a novel protein labeling technology for cell imaging and protein analysis. ACS Chem Biol 3 (2008) 373-382
-
(2008)
ACS Chem Biol
, vol.3
, pp. 373-382
-
-
Los, G.V.1
Encell, L.P.2
McDougall, M.G.3
Hartzell, D.D.4
Karassina, N.5
Zimprich, C.6
Wood, M.G.7
Learish, R.8
Ohane, R.F.9
Urh, M.10
-
31
-
-
50649112213
-
Activity-based protein profiling: from enzyme chemistry
-
Cravatt B.F., Wright A.T., and Kozarich J.W. Activity-based protein profiling: from enzyme chemistry. Annu Rev Biochem 77 (2008) 383-414
-
(2008)
Annu Rev Biochem
, vol.77
, pp. 383-414
-
-
Cravatt, B.F.1
Wright, A.T.2
Kozarich, J.W.3
-
32
-
-
65349110554
-
Ligand-directed tosyl chemistry for protein labeling in vivo
-
Tsukiji S., Miyagawa M., Takaoka Y., Tamura T., and Hamachi I. Ligand-directed tosyl chemistry for protein labeling in vivo. Nat Chem Biol 5 (2009) 341-343
-
(2009)
Nat Chem Biol
, vol.5
, pp. 341-343
-
-
Tsukiji, S.1
Miyagawa, M.2
Takaoka, Y.3
Tamura, T.4
Hamachi, I.5
-
33
-
-
50649121477
-
Advances in single-molecule fluorescence methods for molecular biology
-
Joo C., Balci H., Ishitsuka Y., Buranachai C., and Ha T. Advances in single-molecule fluorescence methods for molecular biology. Annu Rev Biochem 77 (2008) 51-76
-
(2008)
Annu Rev Biochem
, vol.77
, pp. 51-76
-
-
Joo, C.1
Balci, H.2
Ishitsuka, Y.3
Buranachai, C.4
Ha, T.5
-
34
-
-
33749019097
-
Innovation: a chemical toolkit for proteins-an expanded genetic code
-
Xie J.M., and Schultz P.G. Innovation: a chemical toolkit for proteins-an expanded genetic code. Nat Rev Mol Cell Biol 7 (2006) 775-782
-
(2006)
Nat Rev Mol Cell Biol
, vol.7
, pp. 775-782
-
-
Xie, J.M.1
Schultz, P.G.2
-
35
-
-
58849110330
-
A general and efficient method for the site-specific dual-labeling of proteins for single molecule fluorescence resonance energy transfer
-
Brustad E.M., Lemke E.A., Schultz P.G., and Deniz A.A. A general and efficient method for the site-specific dual-labeling of proteins for single molecule fluorescence resonance energy transfer. J Am Chem Soc 130 (2008) 17664-17665
-
(2008)
J Am Chem Soc
, vol.130
, pp. 17664-17665
-
-
Brustad, E.M.1
Lemke, E.A.2
Schultz, P.G.3
Deniz, A.A.4
-
36
-
-
58849164442
-
Single-molecule imaging of a fluorescent unnatural amino acid incorporated into nicotinic receptors
-
Pantoja R., Rodriguez E.A., Dibas M.I., Dougherty D.A., and Lester H.A. Single-molecule imaging of a fluorescent unnatural amino acid incorporated into nicotinic receptors. Biophys J 96 (2009) 226-237
-
(2009)
Biophys J
, vol.96
, pp. 226-237
-
-
Pantoja, R.1
Rodriguez, E.A.2
Dibas, M.I.3
Dougherty, D.A.4
Lester, H.A.5
-
37
-
-
37549026429
-
Bioorthogonal click chemistry: covalent labeling in living systems
-
Baskin J.M., and Bertozzi C.R. Bioorthogonal click chemistry: covalent labeling in living systems. QSAR Comb Sci 26 (2007) 1211-1219
-
(2007)
QSAR Comb Sci
, vol.26
, pp. 1211-1219
-
-
Baskin, J.M.1
Bertozzi, C.R.2
-
38
-
-
33744792907
-
Confocal three dimensional tracking of a single nanoparticle with concurrent spectroscopic readouts
-
Cang H., Wong C.M., Xu C.S., Rizvi A.H., and Yang H. Confocal three dimensional tracking of a single nanoparticle with concurrent spectroscopic readouts. Appl Phys Lett 88 (2006) 223901
-
(2006)
Appl Phys Lett
, vol.88
, pp. 223901
-
-
Cang, H.1
Wong, C.M.2
Xu, C.S.3
Rizvi, A.H.4
Yang, H.5
-
39
-
-
38449116903
-
Guiding a confocal microscope by a single fluorescent nanoparticle
-
Cang H., Xu C.S., Montiel D., and Yang H. Guiding a confocal microscope by a single fluorescent nanoparticle. Opt Lett 32 (2007) 2729-2731
-
(2007)
Opt Lett
, vol.32
, pp. 2729-2731
-
-
Cang, H.1
Xu, C.S.2
Montiel, D.3
Yang, H.4
-
40
-
-
36549058177
-
Three-dimensional tracking of individual quantum dots
-
Lessard G.A., Goodwin P.M., and Werner J.H. Three-dimensional tracking of individual quantum dots. Appl Phys Lett 91 (2007) 224106
-
(2007)
Appl Phys Lett
, vol.91
, pp. 224106
-
-
Lessard, G.A.1
Goodwin, P.M.2
Werner, J.H.3
-
41
-
-
34547202026
-
Target-locking acquisition with real-time confocal (TARC) microscopy
-
Lu P.J., Sims P.A., Oki H., Macarthur J.B., and Weitz D.A. Target-locking acquisition with real-time confocal (TARC) microscopy. Opt Express 15 (2007) 8702-8712
-
(2007)
Opt Express
, vol.15
, pp. 8702-8712
-
-
Lu, P.J.1
Sims, P.A.2
Oki, H.3
Macarthur, J.B.4
Weitz, D.A.5
-
42
-
-
43549121209
-
Progress in single-molecule tracking spectroscopy
-
A recent summary on several new techniques that enable continuously following individual nanoscale probes in real time as they move in three dimensions.
-
Cang H., Xu C.S., and Yang H. Progress in single-molecule tracking spectroscopy. Chem Phys Lett 457 (2008) 285-291. A recent summary on several new techniques that enable continuously following individual nanoscale probes in real time as they move in three dimensions.
-
(2008)
Chem Phys Lett
, vol.457
, pp. 285-291
-
-
Cang, H.1
Xu, C.S.2
Yang, H.3
-
43
-
-
36749086995
-
Quantum dot photon statistics measured by three-dimensional particl tracking
-
McHale K., Berglund A.J., and Mabuchi H. Quantum dot photon statistics measured by three-dimensional particl tracking. Nano Lett 7 (2007) 3535-3539
-
(2007)
Nano Lett
, vol.7
, pp. 3535-3539
-
-
McHale, K.1
Berglund, A.J.2
Mabuchi, H.3
-
44
-
-
58149113044
-
Confocal, three-dimensional tracking of individual quantum dots in high-background environments
-
Wells N.P., Lessard G.A., and Werner J.H. Confocal, three-dimensional tracking of individual quantum dots in high-background environments. Anal Chem 80 (2008) 9830-9834
-
(2008)
Anal Chem
, vol.80
, pp. 9830-9834
-
-
Wells, N.P.1
Lessard, G.A.2
Werner, J.H.3
-
45
-
-
49149100796
-
Observation of spectral anisotropy of gold nanoparticles
-
Cang H., Montiel D., Xu C.S., and Yang H. Observation of spectral anisotropy of gold nanoparticles. J Chem Phys 129 (2008) 044503
-
(2008)
J Chem Phys
, vol.129
, pp. 044503
-
-
Cang, H.1
Montiel, D.2
Xu, C.S.3
Yang, H.4
-
46
-
-
64249119441
-
Real-time multi-parameter spectroscopy and localization in three-dimensional single-particle tracking
-
Hellriegel C., and Gratton E. Real-time multi-parameter spectroscopy and localization in three-dimensional single-particle tracking. J R Soc Interface 6 (2009) S3-S14
-
(2009)
J R Soc Interface
, vol.6
-
-
Hellriegel, C.1
Gratton, E.2
-
47
-
-
34247953814
-
More is different-broken symmetry and nature of hierarchical structure of science
-
Anderson P.W. More is different-broken symmetry and nature of hierarchical structure of science. Science 177 (1972) 393-396
-
(1972)
Science
, vol.177
, pp. 393-396
-
-
Anderson, P.W.1
|