-
1
-
-
58849167390
-
A decade of genome-wide gene expression profiling in acute myeloid leukemia: flashback and prospects
-
10.1182/blood-2008-04-153239, 18703705
-
Wouters BJ, Löwenberg B, Delwel R. A decade of genome-wide gene expression profiling in acute myeloid leukemia: flashback and prospects. Blood 2009, 113(2):291-8. 10.1182/blood-2008-04-153239, 18703705.
-
(2009)
Blood
, vol.113
, Issue.2
, pp. 291-298
-
-
Wouters, B.J.1
Löwenberg, B.2
Delwel, R.3
-
2
-
-
0033569406
-
Molecular classification of cancer: class discovery and class prediction by gene expression monitoring
-
10.1126/science.286.5439.531, 10521349
-
Golub TR, Slonim DK, Tamayo P, Huard C, Gaasenbeek M, Mesirov JP, Coller H, Loh ML, Downing JR, Caligiuri MA, Bloomfield CD, Lander ES. Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. Science 1999, 286(5439):531-7. 10.1126/science.286.5439.531, 10521349.
-
(1999)
Science
, vol.286
, Issue.5439
, pp. 531-537
-
-
Golub, T.R.1
Slonim, D.K.2
Tamayo, P.3
Huard, C.4
Gaasenbeek, M.5
Mesirov, J.P.6
Coller, H.7
Loh, M.L.8
Downing, J.R.9
Caligiuri, M.A.10
Bloomfield, C.D.11
Lander, E.S.12
-
3
-
-
19044399684
-
Classification, subtype discovery, and prediction of outcome in pediatric acute lymphoblastic leukemia by gene expression profiling
-
10.1016/S1535-6108(02)00032-6, 12086872
-
Yeoh EJ, Ross ME, Shurtleff SA, Williams WK, Patel D, Mahfouz R, Behm FG, Raimondi SC, Relling MV, Patel A, Cheng C, Campana D, Wilkins D, Zhou X, Li J, Liu H, Pui CH, Evans WE, Naeve C, Wong L, Downing JR. Classification, subtype discovery, and prediction of outcome in pediatric acute lymphoblastic leukemia by gene expression profiling. Cancer Cell 2002, 1(2):133-43. 10.1016/S1535-6108(02)00032-6, 12086872.
-
(2002)
Cancer Cell
, vol.1
, Issue.2
, pp. 133-143
-
-
Yeoh, E.J.1
Ross, M.E.2
Shurtleff, S.A.3
Williams, W.K.4
Patel, D.5
Mahfouz, R.6
Behm, F.G.7
Raimondi, S.C.8
Relling, M.V.9
Patel, A.10
Cheng, C.11
Campana, D.12
Wilkins, D.13
Zhou, X.14
Li, J.15
Liu, H.16
Pui, C.H.17
Evans, W.E.18
Naeve, C.19
Wong, L.20
Downing, J.R.21
more..
-
4
-
-
18444388287
-
Acute myeloid leukemias with reciprocal rearrangements can be distinguished by specific gene expression profiles
-
10.1073/pnas.142103599, 126615, 12105272
-
Schoch C, Kohlmann A, Schnittger S, Brors B, Dugas M, Mergenthaler S, Kern W, Hiddemann W, Eils R, Haferlach T. Acute myeloid leukemias with reciprocal rearrangements can be distinguished by specific gene expression profiles. Proc Natl Acad Sci USA 2002, 99(15):10008-13. 10.1073/pnas.142103599, 126615, 12105272.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, Issue.15
, pp. 10008-10013
-
-
Schoch, C.1
Kohlmann, A.2
Schnittger, S.3
Brors, B.4
Dugas, M.5
Mergenthaler, S.6
Kern, W.7
Hiddemann, W.8
Eils, R.9
Haferlach, T.10
-
5
-
-
0742289562
-
Pediatric acute lymphoblastic leukemia (ALL) gene expression signatures classify an independent cohort of adult ALL patients
-
10.1038/sj.leu.2403167, 14603332
-
Kohlmann A, Schoch C, Schnittger S, Dugas M, Hiddemann W, Kern W, Haferlach T. Pediatric acute lymphoblastic leukemia (ALL) gene expression signatures classify an independent cohort of adult ALL patients. Leukemia 2004, 18:63-71. 10.1038/sj.leu.2403167, 14603332.
-
(2004)
Leukemia
, vol.18
, pp. 63-71
-
-
Kohlmann, A.1
Schoch, C.2
Schnittger, S.3
Dugas, M.4
Hiddemann, W.5
Kern, W.6
Haferlach, T.7
-
6
-
-
16544369516
-
Use of gene-expression profiling to identify prognostic subclasses in adult acute myeloid leukemia
-
10.1056/NEJMoa031046, 15084693
-
Bullinger L, Döhner K, Bair E, Fröhling S, Schlenk RF, Tibshirani R, Döhner H, Pollack JR. Use of gene-expression profiling to identify prognostic subclasses in adult acute myeloid leukemia. N Engl J Med 2004, 350(16):1605-16. 10.1056/NEJMoa031046, 15084693.
-
(2004)
N Engl J Med
, vol.350
, Issue.16
, pp. 1605-1616
-
-
Bullinger, L.1
Döhner, K.2
Bair, E.3
Fröhling, S.4
Schlenk, R.F.5
Tibshirani, R.6
Döhner, H.7
Pollack, J.R.8
-
7
-
-
11144358111
-
Prognostically useful gene-expression profiles in acute myeloid leukemia
-
10.1056/NEJMoa040465, 15084694
-
Valk PJ, Verhaak RG, Beijen MA, Erpelinck CA, Barjesteh van Waalwijk van Doorn-Khosrovani S, Boer JM, Beverloo HB, Moorhouse MJ, Spek PJ, Löwenberg B, Delwel R. Prognostically useful gene-expression profiles in acute myeloid leukemia. N Engl J Med 2004, 350(16):1617-28. 10.1056/NEJMoa040465, 15084694.
-
(2004)
N Engl J Med
, vol.350
, Issue.16
, pp. 1617-1628
-
-
Valk, P.J.1
Verhaak, R.G.2
Beijen, M.A.3
Erpelinck, C.A.4
Barjesteh van Waalwijk van Doorn-Khosrovani, S.5
Boer, J.M.6
Beverloo, H.B.7
Moorhouse, M.J.8
Spek, P.J.9
Löwenberg, B.10
Delwel, R.11
-
8
-
-
47249121732
-
Improving the power for detecting overlapping genes from multiple DNA microarray-derived gene lists
-
10.1186/1471-2105-9-S6-S14, 2423437, 18541049
-
Deng X, Xu J, Wang C. Improving the power for detecting overlapping genes from multiple DNA microarray-derived gene lists. BMC Bioinformatics 2008, 9(Suppl 6):S14. 10.1186/1471-2105-9-S6-S14, 2423437, 18541049.
-
(2008)
BMC Bioinformatics
, vol.9
, Issue.SUPPL. 6
-
-
Deng, X.1
Xu, J.2
Wang, C.3
-
9
-
-
49649083648
-
The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies
-
10.1186/1471-2105-9-S9-S10, 2537561, 18793455
-
Shi L, Jones WD, Jensen RV, Harris SC, Perkins RG, Goodsaid FM, Guo L, Croner LJ, Boysen C, Fang H, Qian F, Amur S, Bao W, Barbacioru CC, Bertholet V, Cao XM, Chu TM, Collins PJ, Fan XH, Frueh FW, Fuscoe JC, Guo X, Han J, Herman D, Hong H, Kawasaki ES, Li QZ, Luo Y, Ma Y, Mei N, Peterson RL, Puri RK, Shippy R, Su Z, Sun YA, Sun H, Thorn B, Turpaz Y, Wang C, Wang SJ, Warrington JA, Willey JC, Wu J, Xie Q, Zhang L, Zhang L, Zhong S, Wolfinger RD, Tong W. The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies. BMC Bioinformatics 2008, 9(Suppl 9):S10. 10.1186/1471-2105-9-S9-S10, 2537561, 18793455.
-
(2008)
BMC Bioinformatics
, vol.9
, Issue.SUPPL. 9
-
-
Shi, L.1
Jones, W.D.2
Jensen, R.V.3
Harris, S.C.4
Perkins, R.G.5
Goodsaid, F.M.6
Guo, L.7
Croner, L.J.8
Boysen, C.9
Fang, H.10
Qian, F.11
Amur, S.12
Bao, W.13
Barbacioru, C.C.14
Bertholet, V.15
Cao, X.M.16
Chu, T.M.17
Collins, P.J.18
Fan, X.H.19
Frueh, F.W.20
Fuscoe, J.C.21
Guo, X.22
Han, J.23
Herman, D.24
Hong, H.25
Kawasaki, E.S.26
Li, Q.Z.27
Luo, Y.28
Ma, Y.29
Mei, N.30
Peterson, R.L.31
Puri, R.K.32
Shippy, R.33
Su, Z.34
Sun, Y.A.35
Sun, H.36
Thorn, B.37
Turpaz, Y.38
Wang, C.39
Wang, S.J.40
Warrington, J.A.41
Willey, J.C.42
Wu, J.43
Xie, Q.44
Zhang, L.45
Zhang, L.46
Zhong, S.47
Wolfinger, R.D.48
Tong, W.49
more..
-
10
-
-
13444282534
-
Outcome signature genes in breast cancer: is there a unique set?
-
10.1093/bioinformatics/bth469, 15308542
-
Ein-Dor L, Kela I, Getz G, Givol D, Domany E. Outcome signature genes in breast cancer: is there a unique set?. Bioinformatics 2005, 21(2):171-8. 10.1093/bioinformatics/bth469, 15308542.
-
(2005)
Bioinformatics
, vol.21
, Issue.2
, pp. 171-178
-
-
Ein-Dor, L.1
Kela, I.2
Getz, G.3
Givol, D.4
Domany, E.5
-
11
-
-
33645825183
-
Thousands of samples are needed to generate a robust gene list for predicting outcome in cancer
-
10.1073/pnas.0601231103, 1458674, 16585533
-
Ein-Dor L, Zuk O, Domany E. Thousands of samples are needed to generate a robust gene list for predicting outcome in cancer. Proc Natl Acad Sci USA 2006, 103(15):5923-8. 10.1073/pnas.0601231103, 1458674, 16585533.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.15
, pp. 5923-5928
-
-
Ein-Dor, L.1
Zuk, O.2
Domany, E.3
-
12
-
-
2342624566
-
Microarray reality checks in the context of a complex disease
-
10.1038/nbt965, 15122300
-
Miklos GL, Maleszka R. Microarray reality checks in the context of a complex disease. Nat Biotechnol 2004, 22(5):615-21. 10.1038/nbt965, 15122300.
-
(2004)
Nat Biotechnol
, vol.22
, Issue.5
, pp. 615-621
-
-
Miklos, G.L.1
Maleszka, R.2
-
13
-
-
0141905890
-
Evaluation of gene expression measurements from commercial microarray platforms
-
10.1093/nar/gkg763, 206463, 14500831
-
Tan PK, Downey TJ, Spitznagel EL, Xu P, Fu D, Dimitrov DS, Lempicki RA, Raaka BM, Cam MC. Evaluation of gene expression measurements from commercial microarray platforms. Nucleic Acids Res 2003, 31(19):5676-84. 10.1093/nar/gkg763, 206463, 14500831.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.19
, pp. 5676-5684
-
-
Tan, P.K.1
Downey, T.J.2
Spitznagel, E.L.3
Xu, P.4
Fu, D.5
Dimitrov, D.S.6
Lempicki, R.A.7
Raaka, B.M.8
Cam, M.C.9
-
14
-
-
38349088960
-
Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data
-
10.1186/1471-2105-8-412, 2204045, 17961233
-
Chen JJ, Hsueh HM, Delongchamp RR, Lin CJ, Tsai CA. Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data. BMC Bioinformatics 2007, 8:412. 10.1186/1471-2105-8-412, 2204045, 17961233.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 412
-
-
Chen, J.J.1
Hsueh, H.M.2
Delongchamp, R.R.3
Lin, C.J.4
Tsai, C.A.5
-
15
-
-
51749123784
-
Apparently low reproducibility of true differential expression discoveries in microarray studies
-
10.1093/bioinformatics/btn365, 18632747
-
Zhang M, Yao C, Guo Z, Zou J, Zhang L, Xiao H, Wang D, Yang D, Gong X, Zhu J, Li Y, Li X. Apparently low reproducibility of true differential expression discoveries in microarray studies. Bioinformatics 2008, 24(18):2057-63. 10.1093/bioinformatics/btn365, 18632747.
-
(2008)
Bioinformatics
, vol.24
, Issue.18
, pp. 2057-2063
-
-
Zhang, M.1
Yao, C.2
Guo, Z.3
Zou, J.4
Zhang, L.5
Xiao, H.6
Wang, D.7
Yang, D.8
Gong, X.9
Zhu, J.10
Li, Y.11
Li, X.12
-
16
-
-
61449260049
-
On reliable discovery of molecular signatures
-
10.1186/1471-2105-10-38, 2646701, 19178740
-
Nilsson R, Bjorkegren J, Tegner J. On reliable discovery of molecular signatures. BMC Bioinformatics 2009, 10:38. 10.1186/1471-2105-10-38, 2646701, 19178740.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 38
-
-
Nilsson, R.1
Bjorkegren, J.2
Tegner, J.3
-
17
-
-
69249085408
-
Stability and aggregation of ranked gene lists
-
10.1093/bib/bbp034, 19679825
-
Boulesteix A, Slawski M. Stability and aggregation of ranked gene lists. Brief Bioinform 2009, 10(5):556-68. 10.1093/bib/bbp034, 19679825.
-
(2009)
Brief Bioinform
, vol.10
, Issue.5
, pp. 556-568
-
-
Boulesteix, A.1
Slawski, M.2
-
18
-
-
33744975264
-
L2L: a simple tool for discovering the hidden significance in microarray expression data
-
10.1186/gb-2005-6-9-r81, 1242216, 16168088
-
Newman JC, Weiner AM. L2L: a simple tool for discovering the hidden significance in microarray expression data. Genome Biol 2005, 6(9):R81. 10.1186/gb-2005-6-9-r81, 1242216, 16168088.
-
(2005)
Genome Biol
, vol.6
, Issue.9
-
-
Newman, J.C.1
Weiner, A.M.2
-
19
-
-
26444563353
-
List of lists-annotated (LOLA): a database for annotation and comparison of published microarray gene lists
-
10.1016/j.gene.2005.07.008, 16140476
-
Cahan P, Ahmad AM, Burke H, Fu S, Lai Y, Florea L, Dharker N, Kobrinski T, Kale P, McCaffrey TA. List of lists-annotated (LOLA): a database for annotation and comparison of published microarray gene lists. Gene 2005, 360:78-82. 10.1016/j.gene.2005.07.008, 16140476.
-
(2005)
Gene
, vol.360
, pp. 78-82
-
-
Cahan, P.1
Ahmad, A.M.2
Burke, H.3
Fu, S.4
Lai, Y.5
Florea, L.6
Dharker, N.7
Kobrinski, T.8
Kale, P.9
McCaffrey, T.A.10
-
20
-
-
58049141153
-
Microarray-based gene set analysis: a comparison of current methods
-
10.1186/1471-2105-9-502, 2607289, 19038052
-
Song S, Black MA. Microarray-based gene set analysis: a comparison of current methods. BMC Bioinformatics 2008, 9:502. 10.1186/1471-2105-9-502, 2607289, 19038052.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 502
-
-
Song, S.1
Black, M.A.2
-
21
-
-
38949165049
-
Comparative evaluation of gene-set analysis methods
-
10.1186/1471-2105-8-431, 2238724, 17988400
-
Liu Q, Dinu I, Adewale AJ, Potter JD, Yasui Y. Comparative evaluation of gene-set analysis methods. BMC Bioinformatics 2007, 8:431. 10.1186/1471-2105-8-431, 2238724, 17988400.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 431
-
-
Liu, Q.1
Dinu, I.2
Adewale, A.J.3
Potter, J.D.4
Yasui, Y.5
-
22
-
-
63449107173
-
A general modular framework for gene set enrichment analysis
-
10.1186/1471-2105-10-47, 2661051, 19192285
-
Ackermann M, Strimmer K. A general modular framework for gene set enrichment analysis. BMC Bioinformatics 2009, 10:47. 10.1186/1471-2105-10-47, 2661051, 19192285.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 47
-
-
Ackermann, M.1
Strimmer, K.2
-
23
-
-
43149116763
-
Gene-set approach for expression pattern analysis
-
10.1093/bib/bbn001, 18202032
-
Nam D, Kim SY. Gene-set approach for expression pattern analysis. Brief Bioinform 2008, 9(3):189-97. 10.1093/bib/bbn001, 18202032.
-
(2008)
Brief Bioinform
, vol.9
, Issue.3
, pp. 189-197
-
-
Nam, D.1
Kim, S.Y.2
-
24
-
-
58549112996
-
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
-
10.1093/nar/gkn923, 2615629, 19033363
-
Huang DW, Sherman BT, Lempicki RA. Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res 2009, 37:1-13. 10.1093/nar/gkn923, 2615629, 19033363.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 1-13
-
-
Huang, D.W.1
Sherman, B.T.2
Lempicki, R.A.3
-
25
-
-
0034069495
-
Gene ontology: tool for the unification of biology
-
10.1038/75556, 10802651
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G. Gene ontology: tool for the unification of biology. Nat Genet 2000, 25:25-9. 10.1038/75556, 10802651.
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
Harris, M.A.11
Hill, D.P.12
Issel-Tarver, L.13
Kasarskis, A.14
Lewis, S.15
Matese, J.C.16
Richardson, J.E.17
Ringwald, M.18
Rubin, G.M.19
Sherlock, G.20
more..
-
26
-
-
27344435774
-
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
-
10.1073/pnas.0506580102, 1239896,1239896, 16199517
-
Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, Gillette MA, Paulovich A, Pomeroy SL, Golub TR, Lander ES, Mesirov JP. Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA 2005, 102(43):15545-50. 10.1073/pnas.0506580102, 1239896,1239896, 16199517.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, Issue.43
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
Mukherjee, S.4
Ebert, B.L.5
Gillette, M.A.6
Paulovich, A.7
Pomeroy, S.L.8
Golub, T.R.9
Lander, E.S.10
Mesirov, J.P.11
-
27
-
-
25444502609
-
PAGE: parametric analysis of gene set enrichment
-
10.1186/1471-2105-6-144, 1183189, 15941488
-
Kim SY, Volsky DJ. PAGE: parametric analysis of gene set enrichment. BMC Bioinformatics 2005, 6:144. 10.1186/1471-2105-6-144, 1183189, 15941488.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 144
-
-
Kim, S.Y.1
Volsky, D.J.2
-
28
-
-
33749999763
-
Group testing for pathway analysis improves comparability of different microarray datasets
-
10.1093/bioinformatics/btl424, 16895928
-
Manoli T, Gretz N, Gröne HJ, Kenzelmann M, Eils R, Brors B. Group testing for pathway analysis improves comparability of different microarray datasets. Bioinformatics 2006, 22(20):2500-6. 10.1093/bioinformatics/btl424, 16895928.
-
(2006)
Bioinformatics
, vol.22
, Issue.20
, pp. 2500-2506
-
-
Manoli, T.1
Gretz, N.2
Gröne, H.J.3
Kenzelmann, M.4
Eils, R.5
Brors, B.6
-
29
-
-
33847246805
-
Oncomine 3.0: genes, pathways, and networks in a collection of 18,000 cancer gene expression profiles
-
10.1593/neo.07112, 1813932, 17356713
-
Rhodes DR, Kalyana-Sundaram S, Mahavisno V, Varambally R, Yu J, Briggs BB, Barrette TR, Anstet MJ, Kincead-Beal C, Kulkarni P, Varambally S, Ghosh D, Chinnaiyan AM. Oncomine 3.0: genes, pathways, and networks in a collection of 18,000 cancer gene expression profiles. Neoplasia 2007, 9(2):166-80. 10.1593/neo.07112, 1813932, 17356713.
-
(2007)
Neoplasia
, vol.9
, Issue.2
, pp. 166-180
-
-
Rhodes, D.R.1
Kalyana-Sundaram, S.2
Mahavisno, V.3
Varambally, R.4
Yu, J.5
Briggs, B.B.6
Barrette, T.R.7
Anstet, M.J.8
Kincead-Beal, C.9
Kulkarni, P.10
Varambally, S.11
Ghosh, D.12
Chinnaiyan, A.M.13
-
30
-
-
33749335282
-
The connectivity map: using gene-expression signatures to connect small molecules, genes, and disease
-
10.1126/science.1132939, 17008526
-
Lamb J, Crawford ED, Peck D, Modell JW, Blat IC, Wrobel MJ, Lerner J, Brunet JP, Subramanian A, Ross KN, Reich M, Hieronymus H, Wei G, Armstrong SA, Haggarty SJ, Clemons PA, Wei R, Carr SA, Lander ES, Golub TR. The connectivity map: using gene-expression signatures to connect small molecules, genes, and disease. Science 2006, 313(5795):1929-35. 10.1126/science.1132939, 17008526.
-
(2006)
Science
, vol.313
, Issue.5795
, pp. 1929-1935
-
-
Lamb, J.1
Crawford, E.D.2
Peck, D.3
Modell, J.W.4
Blat, I.C.5
Wrobel, M.J.6
Lerner, J.7
Brunet, J.P.8
Subramanian, A.9
Ross, K.N.10
Reich, M.11
Hieronymus, H.12
Wei, G.13
Armstrong, S.A.14
Haggarty, S.J.15
Clemons, P.A.16
Wei, R.17
Carr, S.A.18
Lander, E.S.19
Golub, T.R.20
more..
-
31
-
-
58149182724
-
NCBI GEO: archive for high-throughput functional genomic data
-
Database, 10.1093/nar/gkn764, 2686538, 18940857
-
Barrett T, Troup DB, Wilhite SE, Ledoux P, Rudnev D, Evangelista C, Kim IF, Soboleva A, Tomashevsky M, Marshall KA, Phillippy KH, Sherman PM, Muertter RN, Edgar R. NCBI GEO: archive for high-throughput functional genomic data. Nucleic Acids Res 2009, (37 Database):D885-90. 10.1093/nar/gkn764, 2686538, 18940857.
-
(2009)
Nucleic Acids Res
, Issue.37
-
-
Barrett, T.1
Troup, D.B.2
Wilhite, S.E.3
Ledoux, P.4
Rudnev, D.5
Evangelista, C.6
Kim, I.F.7
Soboleva, A.8
Tomashevsky, M.9
Marshall, K.A.10
Phillippy, K.H.11
Sherman, P.M.12
Muertter, R.N.13
Edgar, R.14
-
32
-
-
52449093402
-
Gene Vector Analysis (Geneva): a unified method to detect differentially-regulated gene sets and similar microarray experiments
-
10.1186/1471-2105-9-348, 2543031, 18721468
-
Tanner SW, Agarwal P. Gene Vector Analysis (Geneva): a unified method to detect differentially-regulated gene sets and similar microarray experiments. BMC Bioinformatics 2008, 9:348. 10.1186/1471-2105-9-348, 2543031, 18721468.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 348
-
-
Tanner, S.W.1
Agarwal, P.2
-
33
-
-
59149088407
-
Repeatability of published microarray gene expression analyses
-
10.1038/ng.295, 19174838
-
Ioannidis JP, Allison DB, Ball CA, Coulibaly I, Cui X, Culhane AC, Falchi M, Furlanello C, Game L, Jurman G, Mangion J, Mehta T, Nitzberg M, Page GP, Petretto E, van Noort V. Repeatability of published microarray gene expression analyses. Nat Genet 2009, 41(2):149-55. 10.1038/ng.295, 19174838.
-
(2009)
Nat Genet
, vol.41
, Issue.2
, pp. 149-155
-
-
Ioannidis, J.P.1
Allison, D.B.2
Ball, C.A.3
Coulibaly, I.4
Cui, X.5
Culhane, A.C.6
Falchi, M.7
Furlanello, C.8
Game, L.9
Jurman, G.10
Mangion, J.11
Mehta, T.12
Nitzberg, M.13
Page, G.P.14
Petretto, E.15
van Noort, V.16
-
34
-
-
0037638555
-
Pre-validation and inference in microarrays
-
16646777
-
Tibshirani R, Efron B. Pre-validation and inference in microarrays. Stat Appl Genet Mol Biol 2002, 1:1. 16646777.
-
(2002)
Stat Appl Genet Mol Biol
, vol.1
, pp. 1
-
-
Tibshirani, R.1
Efron, B.2
-
35
-
-
54849436647
-
MiMiR - an integrated platform for microarray data sharing, mining and analysis
-
10.1186/1471-2105-9-379, 2572073, 18801157
-
Tomlinson C, Thimma M, Alexandrakis S, Castillo T, Dennis JL, Brooks A, Bradley T, Turnbull C, Blaveri E, Barton G, Chiba N, Maratou K, Soutter P, Aitman T, Game L. MiMiR - an integrated platform for microarray data sharing, mining and analysis. BMC Bioinformatics 2008, 9:379. 10.1186/1471-2105-9-379, 2572073, 18801157.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 379
-
-
Tomlinson, C.1
Thimma, M.2
Alexandrakis, S.3
Castillo, T.4
Dennis, J.L.5
Brooks, A.6
Bradley, T.7
Turnbull, C.8
Blaveri, E.9
Barton, G.10
Chiba, N.11
Maratou, K.12
Soutter, P.13
Aitman, T.14
Game, L.15
-
36
-
-
0345832338
-
A global test for groups of genes: testing association with a clinical outcome
-
10.1093/bioinformatics/btg382, 14693814
-
Goeman JJ, Geer SA, de Kort F, van Houwelingen HC. A global test for groups of genes: testing association with a clinical outcome. Bioinformatics 2004, 20:93-99. 10.1093/bioinformatics/btg382, 14693814.
-
(2004)
Bioinformatics
, vol.20
, pp. 93-99
-
-
Goeman, J.J.1
Geer, S.A.2
de Kort, F.3
van Houwelingen, H.C.4
-
37
-
-
84888280274
-
Leukemia Gene Signature Database
-
Leukemia Gene Signature Database. , http://medbioinfo.uni-muenster.de/lgdb
-
-
-
-
38
-
-
18344396568
-
Minimum information about a microarray experiment (MIAME)-toward standards for microarray data
-
10.1038/ng1201-365, 11726920
-
Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet 2001, 29(4):365-71. 10.1038/ng1201-365, 11726920.
-
(2001)
Nat Genet
, vol.29
, Issue.4
, pp. 365-371
-
-
Brazma, A.1
Hingamp, P.2
Quackenbush, J.3
Sherlock, G.4
Spellman, P.5
Stoeckert, C.6
Aach, J.7
Ansorge, W.8
Ball, C.A.9
Causton, H.C.10
Gaasterland, T.11
Glenisson, P.12
Holstege, F.C.13
Kim, I.F.14
Markowitz, V.15
Matese, J.C.16
Parkinson, H.17
Robinson, A.18
Sarkans, U.19
Schulze-Kremer, S.20
Stewart, J.21
Taylor, R.22
Vilo, J.23
Vingron, M.24
more..
-
39
-
-
33645277092
-
The MGED Ontology: a resource for semantics-based description of microarray experiments
-
10.1093/bioinformatics/btl005, 16428806
-
Whetzel PL, Parkinson H, Causton HC, Fan L, Fostel J, Fragoso G, Game L, Heiskanen M, Morrison N, Rocca-Serra P, Sansone SA, Taylor C, White J, Stoeckert CJ. The MGED Ontology: a resource for semantics-based description of microarray experiments. Bioinformatics 2006, 22(7):866-73. 10.1093/bioinformatics/btl005, 16428806.
-
(2006)
Bioinformatics
, vol.22
, Issue.7
, pp. 866-873
-
-
Whetzel, P.L.1
Parkinson, H.2
Causton, H.C.3
Fan, L.4
Fostel, J.5
Fragoso, G.6
Game, L.7
Heiskanen, M.8
Morrison, N.9
Rocca-Serra, P.10
Sansone, S.A.11
Taylor, C.12
White, J.13
Stoeckert, C.J.14
-
40
-
-
34548499539
-
Meta-analysis of microarray results: challenges, opportunities, and recommendations for standardization
-
10.1016/j.gene.2007.06.016, 2111172, 17651921
-
Cahan P, Rovegno F, Mooney D, Newman JC, St Laurent M, McCaffrey TA. Meta-analysis of microarray results: challenges, opportunities, and recommendations for standardization. Gene 2007, 401(1-2):12-8. 10.1016/j.gene.2007.06.016, 2111172, 17651921.
-
(2007)
Gene
, vol.401
, Issue.1-2
, pp. 12-18
-
-
Cahan, P.1
Rovegno, F.2
Mooney, D.3
Newman, J.C.4
St Laurent, M.5
McCaffrey, T.A.6
-
41
-
-
58149185141
-
GenBank
-
Database, 10.1093/nar/gkn723, 2686462, 18940867
-
Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Sayers EW. GenBank. Nucleic Acids Res 2009, (37 Database):D26-31. 10.1093/nar/gkn723, 2686462, 18940867.
-
(2009)
Nucleic Acids Res
, Issue.37
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Sayers, E.W.5
-
42
-
-
0347951358
-
Acute myeloid leukemia fusion proteins deregulate genes involved in stem cell maintenance and DNA repair
-
281638, 14660751
-
Alcalay M, Meani N, Gelmetti V, Fantozzi A, Fagioli M, Orleth A, Riganelli D, Sebastiani C, Cappelli E, Casciari C, Sciurpi MT, Mariano AR, Minardi SP, Luzi L, Muller H, Di Fiore PP, Frosina G, Pelicci PG. Acute myeloid leukemia fusion proteins deregulate genes involved in stem cell maintenance and DNA repair. J Clin Invest 2003, 112(11):1751-61. 281638, 14660751.
-
(2003)
J Clin Invest
, vol.112
, Issue.11
, pp. 1751-1761
-
-
Alcalay, M.1
Meani, N.2
Gelmetti, V.3
Fantozzi, A.4
Fagioli, M.5
Orleth, A.6
Riganelli, D.7
Sebastiani, C.8
Cappelli, E.9
Casciari, C.10
Sciurpi, M.T.11
Mariano, A.R.12
Minardi, S.P.13
Luzi, L.14
Muller, H.15
Di Fiore, P.P.16
Frosina, G.17
Pelicci, P.G.18
-
43
-
-
12144290701
-
Acute myeloid leukemia with complex karyotypes and abnormal chromosome 21: Amplification discloses overexpression of APP, ETS2, and ERG genes
-
10.1073/pnas.0400272101, 374344, 15007164
-
Baldus CD, Liyanarachchi S, Mrózek K, Auer H, Tanner SM, Guimond M, Ruppert AS, Mohamed N, Davuluri RV, Caligiuri MA, Bloomfield CD, de la Chapelle A. Acute myeloid leukemia with complex karyotypes and abnormal chromosome 21: Amplification discloses overexpression of APP, ETS2, and ERG genes. Proc Natl Acad Sci USA 2004, 101(11):3915-20. 10.1073/pnas.0400272101, 374344, 15007164.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, Issue.11
, pp. 3915-3920
-
-
Baldus, C.D.1
Liyanarachchi, S.2
Mrózek, K.3
Auer, H.4
Tanner, S.M.5
Guimond, M.6
Ruppert, A.S.7
Mohamed, N.8
Davuluri, R.V.9
Caligiuri, M.A.10
Bloomfield, C.D.11
de la Chapelle, A.12
-
44
-
-
58149200954
-
Database resources of the National Center for Biotechnology Information
-
Database, 18940862, 10.1093/nar/gkn741, 2686545
-
Sayers EW, Barrett T, Benson DA, Bryant SH, Canese K, Chetvernin V, Church DM, DiCuccio M, Edgar R, Federhen S, Feolo M, Geer LY, Helmberg W, Kapustin Y, Landsman D, Lipman DJ, Madden TL, Maglott D, Miller V, Mizrachi I, Ostell J, Pruitt KD, Schuler GD, Sequeira E, Sherry ST, Shumway M, Sirotkin K, Souvorov A, Starchenko G, Tatusova TA, Wagner L, Yaschenko E, Ye J. Database resources of the National Center for Biotechnology Information. Nucleic Acids Res 2009, (37 Database):D5-15. 18940862, 10.1093/nar/gkn741, 2686545.
-
(2009)
Nucleic Acids Res
, Issue.37
-
-
Sayers, E.W.1
Barrett, T.2
Benson, D.A.3
Bryant, S.H.4
Canese, K.5
Chetvernin, V.6
Church, D.M.7
DiCuccio, M.8
Edgar, R.9
Federhen, S.10
Feolo, M.11
Geer, L.Y.12
Helmberg, W.13
Kapustin, Y.14
Landsman, D.15
Lipman, D.J.16
Madden, T.L.17
Maglott, D.18
Miller, V.19
Mizrachi, I.20
Ostell, J.21
Pruitt, K.D.22
Schuler, G.D.23
Sequeira, E.24
Sherry, S.T.25
Shumway, M.26
Sirotkin, K.27
Souvorov, A.28
Starchenko, G.29
Tatusova, T.A.30
Wagner, L.31
Yaschenko, E.32
Ye, J.33
more..
-
45
-
-
57449103508
-
An 86-probe-set gene-expression signature predicts survival in cytogenetically normal acute myeloid leukemia
-
10.1182/blood-2008-02-134411, 18716133
-
Metzeler KH, Hummel M, Bloomfield CD, Spiekermann K, Braess J, Sauerland MC, Heinecke A, Radmacher M, Marcucci G, Whitman SP, Maharry K, Paschka P, Larson RA, Berdel WE, Büchner T, Wörmann B, Mansmann U, Hiddemann W, Bohlander SK, Buske C. An 86-probe-set gene-expression signature predicts survival in cytogenetically normal acute myeloid leukemia. Blood 2008, 112(10):4193-201. 10.1182/blood-2008-02-134411, 18716133.
-
(2008)
Blood
, vol.112
, Issue.10
, pp. 4193-4201
-
-
Metzeler, K.H.1
Hummel, M.2
Bloomfield, C.D.3
Spiekermann, K.4
Braess, J.5
Sauerland, M.C.6
Heinecke, A.7
Radmacher, M.8
Marcucci, G.9
Whitman, S.P.10
Maharry, K.11
Paschka, P.12
Larson, R.A.13
Berdel, W.E.14
Büchner, T.15
Wörmann, B.16
Mansmann, U.17
Hiddemann, W.18
Bohlander, S.K.19
Buske, C.20
more..
-
46
-
-
0037738513
-
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
-
10.1038/ng1151, 12704389
-
Cheok MH, Yang W, Pui CH, Downing JR, Cheng C, Naeve CW, Relling MV, Evans WE. Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells. Nat Genet 2003, 34:85-90. 10.1038/ng1151, 12704389.
-
(2003)
Nat Genet
, vol.34
, pp. 85-90
-
-
Cheok, M.H.1
Yang, W.2
Pui, C.H.3
Downing, J.R.4
Cheng, C.5
Naeve, C.W.6
Relling, M.V.7
Evans, W.E.8
-
47
-
-
1442335997
-
Gene expression-based high-throughput screening(GE-HTS) and application to leukemia differentiation
-
10.1038/ng1305, 14770183
-
Stegmaier K, Ross KN, Colavito SA, O'Malley S, Stockwell BR, Golub TR. Gene expression-based high-throughput screening(GE-HTS) and application to leukemia differentiation. Nat Genet 2004, 36(3):257-63. 10.1038/ng1305, 14770183.
-
(2004)
Nat Genet
, vol.36
, Issue.3
, pp. 257-263
-
-
Stegmaier, K.1
Ross, K.N.2
Colavito, S.A.3
O'Malley, S.4
Stockwell, B.R.5
Golub, T.R.6
-
49
-
-
34249663294
-
Analyzing gene expression data in terms of gene sets: methodological issues
-
10.1093/bioinformatics/btm051, 17303618
-
Goeman JJ, Buhlmann P. Analyzing gene expression data in terms of gene sets: methodological issues. Bioinformatics 2007, 23(8):980-987. 10.1093/bioinformatics/btm051, 17303618.
-
(2007)
Bioinformatics
, vol.23
, Issue.8
, pp. 980-987
-
-
Goeman, J.J.1
Buhlmann, P.2
-
50
-
-
0002294347
-
A simple sequentially rejective multiple test procedure
-
Holm S. A simple sequentially rejective multiple test procedure. Scand J Stat 1979, 6(2):65-70.
-
(1979)
Scand J Stat
, vol.6
, Issue.2
, pp. 65-70
-
-
Holm, S.1
-
51
-
-
18744406044
-
Testing association of a pathway with survival using gene expression data
-
10.1093/bioinformatics/bti267, 15657105
-
Goeman JJ, Oosting J, Cleton-Jansen AM, Anninga JK, van Houwelingen HC. Testing association of a pathway with survival using gene expression data. Bioinformatics 2005, 21(9):1950-1957. 10.1093/bioinformatics/bti267, 15657105.
-
(2005)
Bioinformatics
, vol.21
, Issue.9
, pp. 1950-1957
-
-
Goeman, J.J.1
Oosting, J.2
Cleton-Jansen, A.M.3
Anninga, J.K.4
van Houwelingen, H.C.5
-
52
-
-
22144472624
-
Prospective gene expression analysis accurately subtypes acute leukaemia in children and establishes a commonality between hyperdiploidy and t(12;21) in acute lymphoblastic leukaemia
-
10.1111/j.1365-2141.2005.05545.x, 15982341
-
van Delft FW, Bellotti T, Luo Z, Jones LK, Patel N, Yiannikouris O, Hill AS, Hubank M, Kempski H, Fletcher D, Chaplin T, Foot N, Young BD, Hann IM, Gammerman A, Saha V. Prospective gene expression analysis accurately subtypes acute leukaemia in children and establishes a commonality between hyperdiploidy and t(12;21) in acute lymphoblastic leukaemia. Br J Haematol 2005, 130:26-35. 10.1111/j.1365-2141.2005.05545.x, 15982341.
-
(2005)
Br J Haematol
, vol.130
, pp. 26-35
-
-
van Delft, F.W.1
Bellotti, T.2
Luo, Z.3
Jones, L.K.4
Patel, N.5
Yiannikouris, O.6
Hill, A.S.7
Hubank, M.8
Kempski, H.9
Fletcher, D.10
Chaplin, T.11
Foot, N.12
Young, B.D.13
Hann, I.M.14
Gammerman, A.15
Saha, V.16
-
53
-
-
11244346557
-
Variance stabilization applied to microarray data calibration and to the quantification of differential expression
-
Huber W, von Heydebreck A, Sueltmann H, Poustka A, Vingron M. Variance stabilization applied to microarray data calibration and to the quantification of differential expression. Bioinformatics 2002, 18(Suppl 1):S96-S104.
-
(2002)
Bioinformatics
, vol.18
, Issue.SUPPL. 1
-
-
Huber, W.1
von Heydebreck, A.2
Sueltmann, H.3
Poustka, A.4
Vingron, M.5
-
54
-
-
27644528185
-
Cross-platform comparability of microarray technology: intra-platform consistency and appropriate data analysis procedures are essential
-
10.1186/1471-2105-6-S2-S12, 1637032, 16026597
-
Shi L, Tong W, Fang H, Scherf U, Han J, Puri RK, Frueh FW, Goodsaid FM, Guo L, Su Z, Han T, Fuscoe JC, Xu ZA, Patterson TA, Hong H, Xie Q, Perkins RG, Chen JJ, Casciano D. Cross-platform comparability of microarray technology: intra-platform consistency and appropriate data analysis procedures are essential. BMC Bioinformatics 2005, 6(Suppl 2):S12. 10.1186/1471-2105-6-S2-S12, 1637032, 16026597.
-
(2005)
BMC Bioinformatics
, vol.6
, Issue.SUPPL. 2
-
-
Shi, L.1
Tong, W.2
Fang, H.3
Scherf, U.4
Han, J.5
Puri, R.K.6
Frueh, F.W.7
Goodsaid, F.M.8
Guo, L.9
Su, Z.10
Han, T.11
Fuscoe, J.C.12
Xu, Z.A.13
Patterson, T.A.14
Hong, H.15
Xie, Q.16
Perkins, R.G.17
Chen, J.J.18
Casciano, D.19
-
55
-
-
74049113213
-
Gene expression profiling in AML with normal karyotype: A multicenter study investigating molecular markers in 252 cases
-
Kohlmann A, Bullinger L, Thiede C, Schaich M, Schnittger S, Dohner K, Dugas M, Dohner H, Ehninger G, Haferlach T. Gene expression profiling in AML with normal karyotype: A multicenter study investigating molecular markers in 252 cases. Blood (ASH Annual Meeting Abstracts) 2008, 112(11):751.
-
(2008)
Blood (ASH Annual Meeting Abstracts)
, vol.112
, Issue.11
, pp. 751
-
-
Kohlmann, A.1
Bullinger, L.2
Thiede, C.3
Schaich, M.4
Schnittger, S.5
Dohner, K.6
Dugas, M.7
Dohner, H.8
Ehninger, G.9
Haferlach, T.10
-
56
-
-
0142121516
-
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
-
10.1093/biostatistics/4.2.249, 12925520
-
Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, Speed TP. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 2003, 4(2):249-64. 10.1093/biostatistics/4.2.249, 12925520.
-
(2003)
Biostatistics
, vol.4
, Issue.2
, pp. 249-264
-
-
Irizarry, R.A.1
Hobbs, B.2
Collin, F.3
Beazer-Barclay, Y.D.4
Antonellis, K.J.5
Scherf, U.6
Speed, T.P.7
-
57
-
-
58149240152
-
Prediction of molecular subtypes in acute myeloid leukemia based on gene expression profiling
-
10.3324/haematol.13299, 2625407, 18838472
-
Verhaak RG, Wouters BJ, Erpelinck CA, Abbas S, Beverloo HB, Lugthart S, Löwenberg B, Delwel R, Valk PJ. Prediction of molecular subtypes in acute myeloid leukemia based on gene expression profiling. Haematologica 2009, 94:131-4. 10.3324/haematol.13299, 2625407, 18838472.
-
(2009)
Haematologica
, vol.94
, pp. 131-134
-
-
Verhaak, R.G.1
Wouters, B.J.2
Erpelinck, C.A.3
Abbas, S.4
Beverloo, H.B.5
Lugthart, S.6
Löwenberg, B.7
Delwel, R.8
Valk, P.J.9
-
58
-
-
68749120703
-
New insights to the MLL recombinome of acute leukemias
-
10.1038/leu.2009.33, 19262598
-
Meyer C, Kowarz E, Hofmann J, Renneville A, Zuna J, Trka J, Ben Abdelali R, Macintyre E, De Braekeleer E, De Braekeleer M, Delabesse E, de Oliveira MP, Cavé H, Clappier E, van Dongen JJ, Balgobind BV, Heuvel-Eibrink MM, Beverloo HB, Panzer-Grümayer R, Teigler-Schlegel A, Harbott J, Kjeldsen E, Schnittger S, Koehl U, Gruhn B, Heidenreich O, Chan LC, Yip SF, Krzywinski M, Eckert C, Möricke A, Schrappe M, Alonso CN, Schäfer BW, Krauter J, Lee DA, Zur Stadt U, Te Kronnie G, Sutton R, Izraeli S, Trakhtenbrot L, Lo Nigro L, Tsaur G, Fechina L, Szczepanski T, Strehl S, Ilencikova D, Molkentin M, Burmeister T, Dingermann T, Klingebiel T, Marschalek R. New insights to the MLL recombinome of acute leukemias. Leukemia 2009, 23(8):1490-9. 10.1038/leu.2009.33, 19262598.
-
(2009)
Leukemia
, vol.23
, Issue.8
, pp. 1490-1499
-
-
Meyer, C.1
Kowarz, E.2
Hofmann, J.3
Renneville, A.4
Zuna, J.5
Trka, J.6
Ben Abdelali, R.7
Macintyre, E.8
De Braekeleer, E.9
De Braekeleer, M.10
Delabesse, E.11
de Oliveira, M.P.12
Cavé, H.13
Clappier, E.14
van Dongen, J.J.15
Balgobind, B.V.16
Heuvel-Eibrink, M.M.17
Beverloo, H.B.18
Panzer-Grümayer, R.19
Teigler-Schlegel, A.20
Harbott, J.21
Kjeldsen, E.22
Schnittger, S.23
Koehl, U.24
Gruhn, B.25
Heidenreich, O.26
Chan, L.C.27
Yip, S.F.28
Krzywinski, M.29
Eckert, C.30
Möricke, A.31
Schrappe, M.32
Alonso, C.N.33
Schäfer, B.W.34
Krauter, J.35
Lee, D.A.36
Zur Stadt, U.37
Te Kronnie, G.38
Sutton, R.39
Izraeli, S.40
Trakhtenbrot, L.41
Lo Nigro, L.42
Tsaur, G.43
Fechina, L.44
Szczepanski, T.45
Strehl, S.46
Ilencikova, D.47
Molkentin, M.48
Burmeister, T.49
Dingermann, T.50
Klingebiel, T.51
Marschalek, R.52
more..
-
59
-
-
9444283773
-
Gene expression profiling of pediatric acute myelogenous leukemia
-
10.1182/blood-2004-03-1154, 15226186
-
Ross ME, Mahfouz R, Onciu M, Liu HC, Zhou X, Song G, Shurtleff SA, Pounds S, Cheng C, Ma J, Ribeiro RC, Rubnitz JE, Girtman K, Williams WK, Raimondi SC, Liang DC, Shih LY, Pui CH, Downing JR. Gene expression profiling of pediatric acute myelogenous leukemia. Blood 2004, 104(12):3679-87. 10.1182/blood-2004-03-1154, 15226186.
-
(2004)
Blood
, vol.104
, Issue.12
, pp. 3679-3687
-
-
Ross, M.E.1
Mahfouz, R.2
Onciu, M.3
Liu, H.C.4
Zhou, X.5
Song, G.6
Shurtleff, S.A.7
Pounds, S.8
Cheng, C.9
Ma, J.10
Ribeiro, R.C.11
Rubnitz, J.E.12
Girtman, K.13
Williams, W.K.14
Raimondi, S.C.15
Liang, D.C.16
Shih, L.Y.17
Pui, C.H.18
Downing, J.R.19
-
60
-
-
28744458859
-
Bioconductor: open software development for computational biology and bioinformatics
-
10.1186/gb-2004-5-10-r80, 545600, 15461798
-
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JY, Zhang J. Bioconductor: open software development for computational biology and bioinformatics. Genome Biol 2004, 5(10):R80. 10.1186/gb-2004-5-10-r80, 545600, 15461798.
-
(2004)
Genome Biol
, vol.5
, Issue.10
-
-
Gentleman, R.C.1
Carey, V.J.2
Bates, D.M.3
Bolstad, B.4
Dettling, M.5
Dudoit, S.6
Ellis, B.7
Gautier, L.8
Ge, Y.9
Gentry, J.10
Hornik, K.11
Hothorn, T.12
Huber, W.13
Iacus, S.14
Irizarry, R.15
Leisch, F.16
Li, C.17
Maechler, M.18
Rossini, A.J.19
Sawitzki, G.20
Smith, C.21
Smyth, G.22
Tierney, L.23
Yang, J.Y.24
Zhang, J.25
more..
-
61
-
-
34548125335
-
Pediatric acute myeloid leukemia with NPM1 mutations is characterized by a gene expression profile with dysregulated HOX gene expression distinct from MLL-rearranged leukemias
-
10.1038/sj.leu.2404808, 17597811
-
Mullighan CG, Kennedy A, Zhou X, Radtke I, Phillips LA, Shurtleff SA, Downing JR. Pediatric acute myeloid leukemia with NPM1 mutations is characterized by a gene expression profile with dysregulated HOX gene expression distinct from MLL-rearranged leukemias. Leukemia 2007, 21(9):2000-9. 10.1038/sj.leu.2404808, 17597811.
-
(2007)
Leukemia
, vol.21
, Issue.9
, pp. 2000-2009
-
-
Mullighan, C.G.1
Kennedy, A.2
Zhou, X.3
Radtke, I.4
Phillips, L.A.5
Shurtleff, S.A.6
Downing, J.R.7
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