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Volumn 81, Issue 2-3, 2009, Pages 141-157

Inferring past demography using spatially explicit population genetic models

Author keywords

Bayesian inference; Genetic diversity; Human evolution; Introgression; Paleodemography; Population genetic models; Range expansion; SPLATCHE software; Surfing phenomena

Indexed keywords


EID: 73649083389     PISSN: 00187143     EISSN: 15346617     Source Type: Journal    
DOI: 10.3378/027.081.0303     Document Type: Article
Times cited : (32)

References (108)
  • 1
    • 8844227502 scopus 로고    scopus 로고
    • Population history and natural selection shape patterns of genetic variation in 132 genes
    • Akey, J. M., M. A. Eberle, M. J. Rieder et al. 2004. Population history and natural selection shape patterns of genetic variation in 132 genes. PLoS Biol. 2(10):e286.
    • (2004) PLoS Biol. , vol.2 , Issue.10
    • Akey, J.M.1    Eberle, M.A.2    Rieder, M.J.3
  • 2
    • 0036911353 scopus 로고    scopus 로고
    • Interrogating a high-density SNP map for signatures of natural selection
    • Akey, J. M., G. Zhang, K. Zhang et al. 2002. Interrogating a high-density SNP map for signatures of natural selection. Genome Res. 12(12):1805-1814.
    • (2002) Genome Res. , vol.12 , Issue.12 , pp. 1805-1814
    • Akey, J.M.1    Zhang, G.2    Zhang, K.3
  • 3
    • 85040730932 scopus 로고
    • Measuring the rate of spread of early farming in Europe
    • Ammerman, A. J., and L. L. Cavalli-Sforza. 1971. Measuring the rate of spread of early farming in Europe. Man 6(4):674-688.
    • (1971) Man , vol.6 , Issue.4 , pp. 674-688
    • Ammerman, A.J.1    Cavalli-Sforza, L.L.2
  • 4
    • 0000112258 scopus 로고
    • A population model for the diffusion of early farming in Europe
    • C. Renfrew, ed. London: Duckworth
    • Ammerman, A. J., and L. L. Cavalli-Sforza. 1973. A population model for the diffusion of early farming in Europe. In The Explanation of Culture Change, C. Renfrew, ed. London: Duckworth, 343-357.
    • (1973) The Explanation of Culture Change , pp. 343-357
    • Ammerman, A.J.1    Cavalli-Sforza, L.L.2
  • 5
    • 39749136156 scopus 로고    scopus 로고
    • Natural selection has driven population differentiation in modern humans
    • Barreiro, L. B., G. Laval, H. Quach et al. 2008. Natural selection has driven population differentiation in modern humans. Nat. Genet. 40(3):340-345.
    • (2008) Nat. Genet. , vol.40 , Issue.3 , pp. 340-345
    • Barreiro, L.B.1    Laval, G.2    Quach, H.3
  • 6
    • 0032713236 scopus 로고    scopus 로고
    • Detecting population expansion and decline using microsatellites
    • Beaumont, M. A. 1999. Detecting population expansion and decline using microsatellites. Genetics 153(4):2013-2029.
    • (1999) Genetics , vol.153 , Issue.4 , pp. 2013-2029
    • Beaumont, M.A.1
  • 7
    • 77955760969 scopus 로고    scopus 로고
    • Adaptivity for ABC algorithms: The ABCPMC scheme
    • in press
    • Beaumont, M. A., J.-M. Cornuet, J.-M. Marin et al. 2009. Adaptivity for ABC algorithms: The ABCPMC scheme. Biometrika (in press).
    • (2009) Biometrika
    • Beaumont, M.A.1    Cornuet, J.-M.2    Marin, J.-M.3
  • 8
    • 0036964474 scopus 로고    scopus 로고
    • Approximate Bayesian computation in population genetics
    • Beaumont, M. A., W. Y. Zhang, and D. J. Balding. 2002. Approximate Bayesian computation in population genetics. Genetics 162(4):2025-2035.
    • (2002) Genetics , vol.162 , Issue.4 , pp. 2025-2035
    • Beaumont, M.A.1    Zhang, W.Y.2    Balding, D.J.3
  • 9
    • 73649113959 scopus 로고    scopus 로고
    • Kinship, marriage, and the genetics of past human dispersals
    • this issue
    • Bentley, R. A., R. H. Layton, and J. Tehrani. 2009. Kinship, marriage, and the genetics of past human dispersals. Hum. Biol. 81(2-3):159-179 (this issue).
    • (2009) Hum. Biol. , vol.81 , Issue.2-3 , pp. 159-179
    • Bentley, R.A.1    Layton, R.H.2    Tehrani, J.3
  • 10
    • 33645049319 scopus 로고    scopus 로고
    • Contrasting effects of long distance seed dispersal on genetic diversity during range expansion
    • Bialozyt, R., B. Ziegenhagen, and R. J. Petit. 2006. Contrasting effects of long distance seed dispersal on genetic diversity during range expansion. J. Evol. Biol. 19(1):12-20.
    • (2006) J. Evol. Biol. , vol.19 , Issue.1 , pp. 12-20
    • Bialozyt, R.1    Ziegenhagen, B.2    Petit, R.J.3
  • 11
    • 73649139811 scopus 로고    scopus 로고
    • Nonlinear regression models for approximate Bayesian computation
    • in press
    • Blum, M. G. B., and O. François. 2009. Nonlinear regression models for approximate Bayesian computation. Statist. Comput. (in press).
    • (2009) Statist. Comput.
    • Blum, M.G.B.1    François, O.2
  • 12
    • 33646267550 scopus 로고    scopus 로고
    • Effects of long-distance dispersal for metapopulation survival and genetic structure at ecological time and spatial scales
    • Bohrer, G., R. Nathan, and S. Volis. 2005. Effects of long-distance dispersal for metapopulation survival and genetic structure at ecological time and spatial scales. J. Ecol. 93(5):1029-1040.
    • (2005) J. Ecol. , vol.93 , Issue.5 , pp. 1029-1040
    • Bohrer, G.1    Nathan, R.2    Volis, S.3
  • 13
    • 52949093871 scopus 로고    scopus 로고
    • African genetic diversity: Implications for human demographic history, modern human origins, and complex disease mapping
    • Campbell, M. C., and S. A. Tishkoff. 2008. African genetic diversity: Implications for human demographic history, modern human origins, and complex disease mapping. Annu. Rev. Genom. Hum. Genet. 9(1):403-433.
    • (2008) Annu. Rev. Genom. Hum. Genet. , vol.9 , Issue.1 , pp. 403-433
    • Campbell, M.C.1    Tishkoff, S.A.2
  • 14
    • 0038651915 scopus 로고    scopus 로고
    • Evidence for a genetic discontinuity between Neanderthals and 24,000-year-old anatomically modern Europeans
    • Caramelli, D., C. Lalueza-Fox, C. Vernesi et al. 2003. Evidence for a genetic discontinuity between Neanderthals and 24,000-year-old anatomically modern Europeans. Proc. Natl. Acad. Sci. USA 100(11):6593-6597.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , Issue.11 , pp. 6593-6597
    • Caramelli, D.1    Lalueza-Fox, C.2    Vernesi, C.3
  • 16
    • 73649113961 scopus 로고    scopus 로고
    • Archaeological demography
    • this issue
    • Chamberlain, A. 2009. Archaeological demography. Hum. Biol. 81(2-3):275-286 (this issue).
    • (2009) Hum. Biol. , vol.81 , Issue.2-3 , pp. 275-286
    • Chamberlain, A.1
  • 17
    • 33646483919 scopus 로고    scopus 로고
    • Bayesian estimation of the timing and severity of a population bottleneck from ancient DNA
    • Chan, Y. L., C. N. K. Anderson, and E. A. Hadly. 2006. Bayesian estimation of the timing and severity of a population bottleneck from ancient DNA. PLoS Genet. 2(4):e59.
    • (2006) PLoS Genet. , vol.2 , Issue.4
    • Chan, Y.L.1    Anderson, C.N.K.2    Hadly, E.A.3
  • 18
    • 14044258418 scopus 로고    scopus 로고
    • Modern humans did not admix with Neanderthals during their range expansion into Europe
    • Currat, M., and L. Excoffier. 2004. Modern humans did not admix with Neanderthals during their range expansion into Europe. PLoS Biol. 2(12):2264-2274.
    • (2004) PLoS Biol. , vol.2 , Issue.12 , pp. 2264-2274
    • Currat, M.1    Excoffier, L.2
  • 19
    • 20344378970 scopus 로고    scopus 로고
    • The effect of the Neolithic expansion on European molecular diversity
    • Currat, M., and L. Excoffier. 2005. The effect of the Neolithic expansion on European molecular diversity. Proc. Biol. Sci. 272(1564):679-688.
    • (2005) Proc. Biol. Sci. , vol.272 , Issue.1564 , pp. 679-688
    • Currat, M.1    Excoffier, L.2
  • 20
    • 33746456056 scopus 로고    scopus 로고
    • Ongoing adaptive evolution of ASPM, a brain size determinant in homo sapiens" and "microcephalin, a gene regulating brain size, continues to evolve adaptively in humans
    • Comment on
    • Currat, M., L. Excoffier, W. Maddison et al. 2006. Comment on "Ongoing Adaptive Evolution of ASPM, a Brain Size Determinant in Homo sapiens" and "Microcephalin, a Gene Regulating Brain Size, Continues to Evolve Adaptively in Humans." Science 313(5784):172.
    • (2006) Science , vol.313 , Issue.5784 , pp. 172
    • Currat, M.L.1    Excoffier, W.2    Maddison, M.3
  • 21
    • 1342288606 scopus 로고    scopus 로고
    • SPLATCHE: A program to simulate genetic diversity taking into account environmental heterogeneity
    • Currat, M., N. Ray, and L. Excoffier. 2004. SPLATCHE: A program to simulate genetic diversity taking into account environmental heterogeneity. Mol. Ecol. Notes 4(1):139-142.
    • (2004) Mol. Ecol. Notes , vol.4 , Issue.1 , pp. 139-142
    • Currat, M.1    Ray, N.2    Excoffier, L.3
  • 22
    • 47749139699 scopus 로고    scopus 로고
    • The hidden side of invasions: Massive introgression by local genes
    • Currat, M., M. Ruedi, R. J. Petit et al. 2008. The hidden side of invasions: Massive introgression by local genes. Evolution 62(8):1908-1920.
    • (2008) Evolution , vol.62 , Issue.8 , pp. 1908-1920
    • Currat, M.1    Ruedi, M.2    Petit, R.J.3
  • 23
    • 34648825300 scopus 로고    scopus 로고
    • Investigation of MCPH1 G37995C and ASPM A44871G polymorphisms and brain size in a healthy cohort
    • Dobson-Stone, C., J. M. Gatt, S. A. Kuan et al. 2007. Investigation of MCPH1 G37995C and ASPM A44871G polymorphisms and brain size in a healthy cohort. Neuroimage 37(2):394-400.
    • (2007) Neuroimage , vol.37 , Issue.2 , pp. 394-400
    • Dobson-Stone, C.1    Gatt, J.M.2    Kuan, S.A.3
  • 24
  • 26
    • 5344241252 scopus 로고    scopus 로고
    • Genetic analysis of complex demographic scenarios: Spatially expanding populations of the cane toad, Bufo marinus
    • Estoup, A., M. Beaumont, F. Sennedot et al. 2004. Genetic analysis of complex demographic scenarios: Spatially expanding populations of the cane toad, Bufo marinus. Evol. Intl. J. Org. Evol. 58(9):2021-2036.
    • (2004) Evol. Intl. J. Org. Evol. , vol.58 , Issue.9 , pp. 2021-2036
    • Estoup, A.1    Beaumont, M.2    Sennedot, F.3
  • 27
    • 0012714531 scopus 로고    scopus 로고
    • A diffusion wave out of Africa: The mechanism of the modern human revolution?
    • Eswaran, V. 2002. A diffusion wave out of Africa: The mechanism of the modern human revolution? Curr. Anthropol. 43(5):749-774.
    • (2002) Curr Anthropol. , vol.43 , Issue.5 , pp. 749-774
    • Eswaran, V.1
  • 28
    • 21244453896 scopus 로고    scopus 로고
    • Genomics refutes an exclusively African origin of humans
    • Eswaran, V., H. Harpending, and A. R. Rogers. 2005. Genomics refutes an exclusively African origin of humans. J. Hum. Evol. 49(1):1-18.
    • (2005) J. Hum. Evol. , vol.49 , Issue.1 , pp. 1-18
    • Eswaran, V.1    Harpending, H.2    Rogers, A.R.3
  • 29
    • 33845335816 scopus 로고    scopus 로고
    • Evidence that the adaptive allele of the brain size gene microcephalin introgressed into Homo sapiens from an archaic Homo lineage
    • Evans, P. D., N. Mekel-Bobrov, E. J. Vallender et al. 2006. Evidence that the adaptive allele of the brain size gene microcephalin introgressed into Homo sapiens from an archaic Homo lineage. Proc. Natl. Acad. Sci. USA 103(48):18,178-18,183.
    • (2006) Proc. Natl. Acad. Sci. USA , vol.103 , Issue.48 , pp. 18178-18183
    • Evans, P.D.1    Mekel-Bobrov, N.2    Vallender, E.J.3
  • 30
    • 0036889242 scopus 로고    scopus 로고
    • Human demographic history: Refi ning the recent African origin model
    • Excoffier, L. 2002. Human demographic history: Refi ning the recent African origin model. Curr. Opin. Genet. Dev. 12(6):675-682.
    • (2002) Curr. Opin. Genet. Dev. , vol.12 , Issue.6 , pp. 675-682
    • Excoffier, L.1
  • 31
    • 33747170241 scopus 로고    scopus 로고
    • Neanderthal genetic diversity: A fresh look from old samples
    • Excoffier, L. 2006. Neanderthal genetic diversity: A fresh look from old samples. Curr. Biol. 16(16): R650-R652.
    • (2006) Curr. Biol. , vol.16 , Issue.16
    • Excoffier, L.1
  • 32
    • 17444424890 scopus 로고    scopus 로고
    • Bayesian analysis of an admixture model with mutations and arbitrarily linked markers
    • Excoffier, L., A. Estoup, and J. M. Cornuet. 2005. Bayesian analysis of an admixture model with mutations and arbitrarily linked markers. Genetics 169(3):1727-1738.
    • (2005) Genetics , vol.169 , Issue.3 , pp. 1727-1738
    • Excoffier, L.1    Estoup, A.2    Cornuet, J.M.3
  • 33
    • 45349102366 scopus 로고    scopus 로고
    • Surfing during population expansions promotes genetic revolutions and structuration
    • Excoffier, L., and N. Ray. 2008. surfing during population expansions promotes genetic revolutions and structuration. Tr. Ecol. Evol. 23(7):347-351.
    • (2008) Tr. Ecol. Evol. , vol.23 , Issue.7 , pp. 347-351
    • Excoffier, L.1    Ray, N.2
  • 34
    • 36749047447 scopus 로고    scopus 로고
    • Statistical evaluation of alternative models of human evolution
    • Fagundes, N. J., N. Ray, M. Beaumont et al. 2007. Statistical evaluation of alternative models of human evolution. Proc. Natl. Acad. Sci. USA 104(45):17,614-17,619.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , Issue.45 , pp. 17614-17619
    • Fagundes, N.J.1    Ray, N.2    Beaumont, M.3
  • 35
    • 44849112517 scopus 로고    scopus 로고
    • Demographic history of European populations of Arabidopsis thaliana
    • François, O., M. G. B. Blum, M. Jakobsson et al. 2008. Demographic history of European populations of Arabidopsis thaliana. PLoS Genet. 4(5):e1000075.
    • (2008) PLoS Genet. , vol.4 , Issue.5
    • François, O.1    Blum, M.G.B.2    Jakobsson, M.3
  • 36
    • 33847684220 scopus 로고    scopus 로고
    • Whole-mtDNA genome sequence analysis of ancient African lineages
    • Gonder, M. K., H. M. Mortensen, F. A. Reed et al. 2007. Whole-mtDNA genome sequence analysis of ancient African lineages. Mol. Biol. Evol. 24(3):757-768.
    • (2007) Mol. Biol. Evol. , vol.24 , Issue.3 , pp. 757-768
    • Gonder, M.K.1    Mortensen, H.M.2    Reed, F.A.3
  • 37
    • 33751077282 scopus 로고    scopus 로고
    • Analysis of one million base pairs of Neanderthal DNA
    • Green, R. E., J. Krause, S. E. Ptak et al. 2006. Analysis of one million base pairs of Neanderthal DNA. Nature 444(7117):330-336.
    • (2006) Nature , vol.444 , Issue.7117 , pp. 330-336
    • Green, R.E.1    Krause, J.2    Ptak, S.E.3
  • 38
    • 38049138580 scopus 로고    scopus 로고
    • Genetic drift at expanding frontiers promotes gene segregation
    • Hallatschek, O., P. Hersen, S. Ramanathan et al. 2007. Genetic drift at expanding frontiers promotes gene segregation. Proc. Natl. Acad. Sci. USA 104(50):19,926-19,930.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , Issue.50 , pp. 19926-19930
    • Hallatschek, O.1    Hersen, P.2    Ramanathan, S.3
  • 39
    • 37849036829 scopus 로고    scopus 로고
    • Gene surfing in expanding populations
    • Hallatschek, O., and D. R. Nelson. 2008. Gene surfing in expanding populations. Theor. Popul. Biol. 73(1):158-170.
    • (2008) Theor. Popul. Biol. , vol.73 , Issue.1 , pp. 158-170
    • Hallatschek, O.1    Nelson, D.R.2
  • 40
    • 20444406878 scopus 로고    scopus 로고
    • Bayesian estimation of recent migration rates after a spatial expansion
    • Hamilton, G., M. Currat, N. Ray et al. 2005a. Bayesian estimation of recent migration rates after a spatial expansion. Genetics 170(1):409-417.
    • (2005) Genetics , vol.170 , Issue.1 , pp. 409-417
    • Hamilton, G.1    Currat, M.2    Ray, N.3
  • 41
    • 19644371954 scopus 로고    scopus 로고
    • Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations
    • Hamilton, G., M. Stoneking, and L. Excoffier. 2005b. Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations. Proc. Natl. Acad. Sci. USA 102(21):7476-7480.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , Issue.21 , pp. 7476-7480
    • Hamilton, G.1    Stoneking, M.2    Excoffier, L.3
  • 42
    • 34547860403 scopus 로고    scopus 로고
    • Going the distance: Human population genetics in a clinal world
    • Handley, L. J. L., A. Manica, J. Goudet et al. 2007. Going the distance: Human population genetics in a clinal world. Tr. Genet. 23(9):432-439.
    • (2007) Tr. Genet. , vol.23 , Issue.9 , pp. 432-439
    • Handley, L.J.L.1    Manica, A.2    Goudet, J.3
  • 43
    • 8644263161 scopus 로고    scopus 로고
    • A structured ancestral population for the evolution of modern humans
    • Harding, R. M., and G. McVean. 2004. A structured ancestral population for the evolution of modern humans. Curr. Opin. Genet. Dev. 14(6):667-674.
    • (2004) Curr. Opin. Genet. Dev. , vol.14 , Issue.6 , pp. 667-674
    • Harding, R.M.1    McVean, G.2
  • 44
    • 1942520928 scopus 로고    scopus 로고
    • Spatial dynamics of human dispersals: Constraints on modeling and archaeological validation
    • Hazelwood, L., and J. Steele. 2004. Spatial dynamics of human dispersals: Constraints on modeling and archaeological validation. J. Archaeol. Sci. 31:669-679.
    • (2004) J. Archaeol. Sci. , vol.31 , pp. 669-679
    • Hazelwood, L.1    Steele, J.2
  • 45
    • 0032822582 scopus 로고    scopus 로고
    • Postglacial recolonization of European biota
    • Hewitt, G. M. 1999. Postglacial recolonization of European biota. Biol. J. Linn. Soc. 68:87-112.
    • (1999) Biol. J. Linn. Soc. , vol.68 , pp. 87-112
    • Hewitt, G.M.1
  • 46
    • 0035047175 scopus 로고    scopus 로고
    • Speciation, hybrid zones, and phylogeography-or seeing genes in space and time
    • Hewitt, G. M. 2001. Speciation, hybrid zones, and phylogeography-or seeing genes in space and time. Mol. Ecol. 10(3):537-549.
    • (2001) Mol. Ecol. , vol.10 , Issue.3 , pp. 537-549
    • Hewitt, G.M.1
  • 47
    • 1242299019 scopus 로고    scopus 로고
    • Genetic consequences of climatic oscillations in the Quaternary
    • Hewitt, G. M. 2004. Genetic consequences of climatic oscillations in the Quaternary. Philos. Trans. R. Soc. Lond. B 359(1442):183-195.
    • (2004) Philos. Trans. R. Soc. Lond. B , vol.359 , Issue.1442 , pp. 183-195
    • Hewitt, G.M.1
  • 48
    • 33846875227 scopus 로고    scopus 로고
    • Test for simultaneous divergence using approximate Bayesian computation
    • Hickerson, M. J., E. A. Stah, and H. A. Lessios. 2006. Test for simultaneous divergence using approximate Bayesian computation. Evolution 60(12):2435-2453.
    • (2006) Evolution , vol.60 , Issue.12 , pp. 2435-2453
    • Hickerson, M.J.1    Stah, E.A.2    Lessios, H.A.3
  • 49
    • 58149293053 scopus 로고    scopus 로고
    • Large allele frequency differences between human continental groups are more likely to have occurred by drift during range expansions than by selection
    • Hofer, T., N. Ray, D. Wegmann et al. 2009. Large allele frequency differences between human continental groups are more likely to have occurred by drift during range expansions than by selection. Ann. Hum. Genet. 73:95-108.
    • (2009) Ann. Hum. Genet. , vol.73 , pp. 95-108
    • Hofer, T.1    Ray, N.2    Wegmann, D.3
  • 50
    • 0000424609 scopus 로고
    • Testing the constant-rate neutral allele model with protein sequence data
    • Hudson, R. R. 1983. Testing the constant-rate neutral allele model with protein sequence data. Evolution 37:203-217.
    • (1983) Evolution , vol.37 , pp. 203-217
    • Hudson, R.R.1
  • 51
    • 85047679528 scopus 로고    scopus 로고
    • Spatial patterns of genetic variation generated by different forms of dispersal during range expansion
    • Ibrahim, K. M., R. A. Nichols, and G. M. Hewitt. 1996. Spatial patterns of genetic variation generated by different forms of dispersal during range expansion. Heredity 77:282-291.
    • (1996) Heredity , vol.77 , pp. 282-291
    • Ibrahim, K.M.1    Nichols, R.A.2    Hewitt, G.M.3
  • 52
    • 34547934499 scopus 로고    scopus 로고
    • Orbital and millennial Antarctic climate variability over the past 800,000 years
    • Jouzel, J., V. Masson-Delmotte, O. Cattani et al. 2007. Orbital and millennial Antarctic climate variability over the past 800,000 years. Science 317(5839):793-796.
    • (2007) Science , vol.317 , Issue.5839 , pp. 793-796
    • Jouzel, J.1    Masson-Delmotte, V.2    Cattani, O.3
  • 54
    • 0002556819 scopus 로고
    • On the genealogy of large populations
    • Kingman, J. F. C. 1982b. On the genealogy of large populations. J. Appl. Probab. 19A:27-43.
    • (1982) J. Appl. Probab. , vol.19 A , pp. 27-43
    • Kingman, J.F.C.1
  • 55
    • 33646243256 scopus 로고    scopus 로고
    • Mixing of propagules from discrete sources at long distance: Comparing a dispersal tail to an exponential
    • Klein, E. K., C. Lavigne, and P. H. Gouyon. 2006. Mixing of propagules from discrete sources at long distance: Comparing a dispersal tail to an exponential. BMC Ecol. 6(1):3.
    • (2006) BMC Ecol. , vol.6 , Issue.1 , pp. 3
    • Klein, E.K.1    Lavigne, C.2    Gouyon, P.H.3
  • 56
    • 33244467305 scopus 로고    scopus 로고
    • The fate of mutations surfing on the wave of a range expansion
    • Klopfstein, S., M. Currat, and L. Excoffier. 2006. The fate of mutations surfing on the wave of a range expansion. Mol. Biol. Evol. 23(3):482-490.
    • (2006) Mol. Biol. Evol. , vol.23 , Issue.3 , pp. 482-490
    • Klopfstein, S.1    Currat, M.2    Excoffier, L.3
  • 57
    • 58349112353 scopus 로고    scopus 로고
    • Coalescent genealogy samplers: Windows into population history
    • Kuhner, M. K. 2009. Coalescent genealogy samplers: Windows into population history. Tr. Ecol. Evol. 24(2):86-93.
    • (2009) Tr. Ecol. Evol. , vol.24 , Issue.2 , pp. 86-93
    • Kuhner, M.K.1
  • 58
    • 0031835126 scopus 로고    scopus 로고
    • Maximum likelihood estimation of population growth rates based on the coalescent
    • Kuhner, M. K., J. Yamato, and J. Felsenstein. 1998. Maximum likelihood estimation of population growth rates based on the coalescent. Genetics 149(1):429-434.
    • (1998) Genetics , vol.149 , Issue.1 , pp. 429-434
    • Kuhner, M.K.1    Yamato, J.2    Felsenstein, J.3
  • 59
    • 0015879546 scopus 로고
    • Distribution of gene frequency as a test of the theory of the selective neutrality of polymorphisms
    • Lewontin, R. C., and J. Krakauer. 1973. Distribution of gene frequency as a test of the theory of the selective neutrality of polymorphisms. Genetics 74(1):175-195.
    • (1973) Genetics , vol.74 , Issue.1 , pp. 175-195
    • Lewontin, R.C.1    Krakauer, J.2
  • 60
    • 30744478949 scopus 로고    scopus 로고
    • Geography is a better determinant of human genetic differentiation than ethnicity
    • Manica, A., F. Prugnolle, and F. Balloux. 2005. Geography is a better determinant of human genetic differentiation than ethnicity. Hum. Genet. 118(3-4):366-371.
    • (2005) Hum. Genet. , vol.118 , Issue.3-4 , pp. 366-371
    • Manica, A.1    Prugnolle, F.2    Balloux, F.3
  • 61
    • 0346734143 scopus 로고    scopus 로고
    • Markov chain Monte Carlo without likelihoods
    • Marjoram, P., J. Molitor, V. Plagnol et al. 2003. Markov chain Monte Carlo without likelihoods. Proc. Natl. Acad. Sci. USA 100(26):15,324-15,328.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , Issue.26 , pp. 15324-15328
    • Marjoram, P.1    Molitor, J.2    Plagnol, V.3
  • 62
    • 33748799967 scopus 로고    scopus 로고
    • Modern computational approaches for analyzing molecular genetic variation data
    • Marjoram, P., and S. Tavare. 2006. Modern computational approaches for analyzing molecular genetic variation data. Nat. Rev. Genet. 7(10):759-770.
    • (2006) Nat. Rev. Genet. , vol.7 , Issue.10 , pp. 759-770
    • Marjoram, P.1    Tavare, S.2
  • 63
    • 34848914818 scopus 로고    scopus 로고
    • Fisher equation for anisotropic diffusion: Simulating South America human dispersals
    • Martino, L. A., A. Osella, C. Dorso et al. 2007. Fisher equation for anisotropic diffusion: Simulating South America human dispersals. Phys. Rev. E 76:1-10.
    • (2007) Phys. Rev. e , vol.76 , pp. 1-10
    • Martino, L.A.1    Osella, A.2    Dorso, C.3
  • 64
    • 24644454655 scopus 로고    scopus 로고
    • Ongoing adaptive evolution of ASPM, a brain size determinant in Homo sapiens
    • Mekel-Bobrov, N., S. L. Gilbert, P. D. Evans et al. 2005. Ongoing adaptive evolution of ASPM, a brain size determinant in Homo sapiens. Science 309(5741):1720-1722.
    • (2005) Science , vol.309 , Issue.5741 , pp. 1720-1722
    • Mekel-Bobrov, N.1    Gilbert, S.L.2    Evans, P.D.3
  • 65
    • 34247123696 scopus 로고    scopus 로고
    • The ongoing adaptive evolution of ASPM and microcephalin is not explained by increased intelligence
    • Mekel-Bobrov, N., D. Posthuma, S. L. Gilbert et al. 2007. The ongoing adaptive evolution of ASPM and microcephalin is not explained by increased intelligence. Hum. Mol. Genet. 16(6):600-608.
    • (2007) Hum. Mol. Genet. , vol.16 , Issue.6 , pp. 600-608
    • Mekel-Bobrov, N.1    Posthuma, D.2    Gilbert, S.L.3
  • 66
    • 33846560358 scopus 로고    scopus 로고
    • The rise and fall of the mountain hare (Lepus timidus) during Pleistocene glaciations: Expansion and retreat with hybridization in the Iberian peninsula
    • Melo-Ferreira, J., P. Boursot, E. Randi et al. 2007. The rise and fall of the mountain hare (Lepus timidus) during Pleistocene glaciations: Expansion and retreat with hybridization in the Iberian peninsula. Mol. Ecol. 16(3):605-618.
    • (2007) Mol. Ecol. , vol.16 , Issue.3 , pp. 605-618
    • Melo-Ferreira, J.1    Boursot, P.2    Randi, E.3
  • 67
    • 27744569906 scopus 로고    scopus 로고
    • Multiple transatlantic introductions of the Western Corn Rootworm
    • Miller, N., A. Estoup, S. Toepfer et al. 2005. Multiple transatlantic introductions of the Western Corn Rootworm. Science 310(5750):992.
    • (2005) Science , vol.310 , Issue.5750 , pp. 992
    • Miller, N.1    Estoup, A.2    Toepfer, S.3
  • 68
    • 38349185030 scopus 로고    scopus 로고
    • Colonization history of the Swiss Rhine basin by the bullhead (Cottus gobio): Inference under a Bayesian spatially explicit framework
    • Neuenschwander, S., C. R. Largiader, N. Ray et al. 2008. Colonization history of the Swiss Rhine basin by the bullhead (Cottus gobio): Inference under a Bayesian spatially explicit framework. Mol. Ecol. 17(3):757-772.
    • (2008) Mol. Ecol. , vol.17 , Issue.3 , pp. 757-772
    • Neuenschwander, S.1    Largiader, C.R.2    Ray, N.3
  • 69
    • 0028042678 scopus 로고
    • The genetic consequences of long-distance dispersal during colonization
    • Nichols, R. A., and G. M. Hewitt. 1994. The genetic consequences of long-distance dispersal during colonization. Heredity 72:312-317.
    • (1994) Heredity , vol.72 , pp. 312-317
    • Nichols, R.A.1    Hewitt, G.M.2
  • 71
    • 0034967295 scopus 로고    scopus 로고
    • Distinguishing migration from isolation: A Markov chain Monte Carlo approach
    • Nielsen, R., and J. Wakeley. 2001. Distinguishing migration from isolation: A Markov chain Monte Carlo approach. Genetics 158(2):885-896.
    • (2001) Genetics , vol.158 , Issue.2 , pp. 885-896
    • Nielsen, R.1    Wakeley, J.2
  • 72
    • 27844602105 scopus 로고    scopus 로고
    • The geographic spread of the CCR5 Delta32 HIVresistance allele
    • Novembre, J., A. P. Galvani, and M. Slatkin. 2005. The geographic spread of the CCR5 Delta32 HIVresistance allele. PLoS Biol. 3(11):e339.
    • (2005) PLoS Biol. , vol.3 , Issue.11
    • Novembre, J.1    Galvani, A.P.2    Slatkin, M.3
  • 73
    • 42649093791 scopus 로고    scopus 로고
    • Interpreting principal component analyses of spatial population genetic variation
    • Novembre, J., and M. Stephens. 2008. Interpreting principal component analyses of spatial population genetic variation. Nat. Genet. 40(5):646-649.
    • (2008) Nat. Genet. , vol.40 , Issue.5 , pp. 646-649
    • Novembre, J.1    Stephens, M.2
  • 74
    • 34447650844 scopus 로고    scopus 로고
    • Introduction history of Drosophila subobscura in the New World: A microsatellite-based survey using ABC methods
    • Pascual, M., M. P. Chapuis, F. Mestres et al. 2007. Introduction history of Drosophila subobscura in the New World: A microsatellite-based survey using ABC methods. Mol. Ecol. 16(15):3069-3083.
    • (2007) Mol. Ecol. , vol.16 , Issue.15 , pp. 3069-3083
    • Pascual, M.1    Chapuis, M.P.2    Mestres, F.3
  • 75
    • 29144443594 scopus 로고    scopus 로고
    • Tracing the origin and spread of agriculture in Europe
    • Pinhasi, R., J. Fort, and A. J. Ammerman. 2005. Tracing the origin and spread of agriculture in Europe. PLoS Biol. 3(12):e410.
    • (2005) PLoS Biol. , vol.3 , Issue.12
    • Pinhasi, R.1    Fort, J.2    Ammerman, A.J.3
  • 76
    • 0032735986 scopus 로고    scopus 로고
    • Population growth of human y chromosomes: A study of Y-chromosome microsatellites
    • Pritchard, J. K., M. T. Seielstad, A. Perez-Lezaun et al. 1999. Population growth of human Y chromosomes: A study of Y-chromosome microsatellites. Mol. Biol. Evol. 16(12):1791-1798.
    • (1999) Mol. Biol. Evol. , vol.16 , Issue.12 , pp. 1791-1798
    • Pritchard, J.K.1    Seielstad, M.T.2    Perez-Lezaun, A.3
  • 77
    • 14744280512 scopus 로고    scopus 로고
    • Geography predicts neutral genetic diversity of human populations
    • Prugnolle, F., A. Manica, and F. Balloux. 2005. Geography predicts neutral genetic diversity of human populations. Curr. Biol. 15(5):R159-R160.
    • (2005) Curr. Biol. , vol.15 , Issue.5
    • Prugnolle, F.1    Manica, A.2    Balloux, F.3
  • 78
    • 27644509150 scopus 로고    scopus 로고
    • Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa
    • Ramachandran, S., O. Deshpande, C. C. Roseman et al. 2005. Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa. Proc. Natl. Acad. Sci. USA 102(44):15,942-15,947.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , Issue.44 , pp. 15942-15947
    • Ramachandran, S.1    Deshpande, O.2    Roseman, C.C.3
  • 79
    • 23744491421 scopus 로고    scopus 로고
    • Recovering the geographic origin of early modern humans by realistic and spatially explicit simulations
    • Ray, N., M. Currat, P. Berthier et al. 2005. Recovering the geographic origin of early modern humans by realistic and spatially explicit simulations. Genome Res. 15(8):1161-1167.
    • (2005) Genome Res. , vol.15 , Issue.8 , pp. 1161-1167
    • Ray, N.1    Currat, M.2    Berthier, P.3
  • 80
    • 0037227366 scopus 로고    scopus 로고
    • Intrademe molecular diversity in spatially expanding populations
    • Ray, N., M. Currat, and L. Excoffier. 2003. Intrademe molecular diversity in spatially expanding populations. Mol. Biol. Evol. 20(1):76-86.
    • (2003) Mol. Biol. Evol. , vol.20 , Issue.1 , pp. 76-86
    • Ray, N.1    Currat, M.2    Excoffier, L.3
  • 81
    • 73649144755 scopus 로고    scopus 로고
    • Incorporating environmental heterogeneity in spatially explicit simulations of human genetic diversity
    • S. Matsumura, P. Forster, and C. Renfrew, eds. Cambridge, U.K.: McDonald Institute for Archaeological Research
    • Ray, N., M. Currat, and L. Excoffier. 2008. Incorporating environmental heterogeneity in spatially explicit simulations of human genetic diversity. In Simulations, Genetics, and Human Prehistory, S. Matsumura, P. Forster, and C. Renfrew, eds. Cambridge, U.K.: McDonald Institute for Archaeological Research, 103-117.
    • (2008) Simulations, Genetics, and Human Prehistory , pp. 103-117
    • Ray, N.1    Currat, M.2    Excoffier, L.3
  • 82
    • 0032493379 scopus 로고    scopus 로고
    • Genetic evidence for a Paleolithic human population expansion in Africa
    • Reich, D. E., and D. B. Goldstein. 1998. Genetic evidence for a Paleolithic human population expansion in Africa. Proc. Natl. Acad. Sci. USA 95(14):8119-8123.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , Issue.14 , pp. 8119-8123
    • Reich, D.E.1    Goldstein, D.B.2
  • 83
    • 42649088044 scopus 로고    scopus 로고
    • Principal component analysis of genetic data
    • Reich, D., A. L. Price, and N. Patterson. 2008. Principal component analysis of genetic data. Nat. Genet. 40(5):491-492.
    • (2008) Nat. Genet. , vol.40 , Issue.5 , pp. 491-492
    • Reich, D.1    Price, A.L.2    Patterson, N.3
  • 84
    • 73649093139 scopus 로고    scopus 로고
    • Climate and demography in early prehistory: Using calibrated 14C dates as population proxies
    • this issue
    • Riede, F. 2009. Climate and demography in early prehistory: Using calibrated 14C dates as population proxies. Hum. Biol. 81(2-3):309-337 (this issue).
    • (2009) Hum. Biol. , vol.81 , Issue.2-3 , pp. 309-337
    • Riede, F.1
  • 85
    • 0037147189 scopus 로고    scopus 로고
    • Genetic structure of human populations
    • Rosenberg, N. A., J. K. Pritchard, J. L. Weber et al. 2002. Genetic structure of human populations. Science 298(5602):2381-2385.
    • (2002) Science , vol.298 , Issue.5602 , pp. 2381-2385
    • Rosenberg, N.A.1    Pritchard, J.K.2    Weber, J.L.3
  • 86
    • 14844285310 scopus 로고    scopus 로고
    • The genomic distribution of population substructure in four populations using 8,525 autosomal SNPs
    • Shriver, M. D., G. C. Kennedy, E. J. Parra et al. 2004. The genomic distribution of population substructure in four populations using 8,525 autosomal SNPs. Hum. Genom. 1(4):274-286.
    • (2004) Hum. Genom. , vol.1 , Issue.4 , pp. 274-286
    • Shriver, M.D.1    Kennedy, G.C.2    Parra, E.J.3
  • 87
    • 33846939958 scopus 로고    scopus 로고
    • Sequential Monte Carlo without likelihoods
    • Sisson, S. A., Y. Fan, and M. M. Tanaka. 2007. Sequential Monte Carlo without likelihoods. Proc. Natl. Acad. Sci. USA 104(6):1760-1765.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , Issue.6 , pp. 1760-1765
    • Sisson, S.A.1    Fan, Y.2    Tanaka, M.M.3
  • 88
    • 0025924487 scopus 로고
    • Genetic evidence for the spread of agriculture in Europe by demic diffusion
    • Sokal, R. R., N. L. Oden, and C. Wilson. 1991. Genetic evidence for the spread of agriculture in Europe by demic diffusion. Nature 351(6322):143-145.
    • (1991) Nature , vol.351 , Issue.6322 , pp. 143-145
    • Sokal, R.R.1    Oden, N.L.2    Wilson, C.3
  • 89
    • 10344221021 scopus 로고    scopus 로고
    • Disentangling the effects of demography and selection in human history
    • Stajich, J. E., and M. W. Hahn. 2005. Disentangling the effects of demography and selection in human history. Mol. Biol. Evol. 22(1):63-73.
    • (2005) Mol. Biol. Evol. , vol.22 , Issue.1 , pp. 63-73
    • Stajich, J.E.1    Hahn, M.W.2
  • 90
    • 0031729246 scopus 로고    scopus 로고
    • Modeling Paleo-Indian dispersals
    • Steele, J., J. Adams, and T. Sluckin. 1998. Modeling Paleo-Indian dispersals. World Archaeol. 30(2):286-305.
    • (1998) World Archaeol. , vol.30 , Issue.2 , pp. 286-305
    • Steele, J.1    Adams, J.2    Sluckin, T.3
  • 91
    • 4143088044 scopus 로고    scopus 로고
    • Genome scans of DNA variability in humans reveal evidence for selective sweeps outside of Africa
    • Storz, J. F., B. A. Payseur, and M. W. Nachman. 2004. Genome scans of DNA variability in humans reveal evidence for selective sweeps outside of Africa. Mol. Biol. Evol. 21(9):1800-1811.
    • (2004) Mol. Biol. Evol. , vol.21 , Issue.9 , pp. 1800-1811
    • Storz, J.F.1    Payseur, B.A.2    Nachman, M.W.3
  • 92
    • 0032055176 scopus 로고    scopus 로고
    • Comparative phylogeography and postglacial colonization routes in Europe
    • Taberlet, P., L. Fumagalli, A. G. Wust-Saucy et al. 1998. Comparative phylogeography and postglacial colonization routes in Europe. Mol. Ecol. 7(4):453-464.
    • (1998) Mol. Ecol. , vol.7 , Issue.4 , pp. 453-464
    • Taberlet, P.1    Fumagalli, L.2    Wust-Saucy, A.G.3
  • 93
    • 0021066244 scopus 로고
    • Evolutionary relationship of DNA sequences in finite populations
    • Tajima, F. 1983. Evolutionary relationship of DNA sequences in finite populations. Genetics 105:437-460.
    • (1983) Genetics , vol.105 , pp. 437-460
    • Tajima, F.1
  • 94
    • 33746419713 scopus 로고    scopus 로고
    • Estimating tuberculosis transmission parameters from genotype data using approximate Bayesian computation
    • Tanaka, M., A. Francis, F. Luciani et al. 2006. Estimating tuberculosis transmission parameters from genotype data using approximate Bayesian computation. Genetics 173:1511-1520.
    • (2006) Genetics , vol.173 , pp. 1511-1520
    • Tanaka, M.1    Francis, A.2    Luciani, F.3
  • 95
    • 0031014291 scopus 로고    scopus 로고
    • Inferring coalescence times from DNA sequence data
    • Tavare, S., D. J. Balding, R. C. Griffi ths et al. 1997. Inferring coalescence times from DNA sequence data. Genetics 145(2):505-518.
    • (1997) Genetics , vol.145 , Issue.2 , pp. 505-518
    • Tavare, S.1    Balding, D.J.2    Griffiths, R.C.3
  • 96
    • 0037034778 scopus 로고    scopus 로고
    • Out of Africa again and again
    • Templeton, A. R. 2002. Out of Africa again and again. Nature 416:45-51.
    • (2002) Nature , vol.416 , pp. 45-51
    • Templeton, A.R.1
  • 98
    • 34548488236 scopus 로고    scopus 로고
    • Evidence for positive selection of MCPH1 and ASPM
    • Comment on papers by Evans et al. and Mekel-Bobrov et al
    • Timpson, N., J. Heron, G. D. Smith et al. 2007. Comment on papers by Evans et al. and Mekel-Bobrov et al. on evidence for positive selection of MCPH1 and ASPM. Science 317(5841):1036.
    • (2007) Science , vol.317 , Issue.5841 , pp. 1036
    • Timpson, N.1    Heron, J.2    Smith, G.D.3
  • 99
    • 35348923543 scopus 로고    scopus 로고
    • Deleterious mutations can surf to high densities on the wave front of an expanding population
    • Travis, J. M. J., T. Munkemuller, O. J. Burton et al. 2007. Deleterious mutations can surf to high densities on the wave front of an expanding population. Mol. Biol. Evol. 24(10):2334-2343.
    • (2007) Mol. Biol. Evol. , vol.24 , Issue.10 , pp. 2334-2343
    • Travis, J.M.J.1    Munkemuller, T.2    Burton, O.J.3
  • 100
    • 37349025758 scopus 로고    scopus 로고
    • Genetic variation and population structure in Native Americans
    • Wang, S., M. Jakobsson, J. C. M. Lewis et al. 2007. Genetic variation and population structure in Native Americans. PLoS Genet. 3(11):e185.
    • (2007) PLoS Genet. , vol.3 , Issue.11
    • Wang, S.1    Jakobsson, M.2    Lewis, J.C.M.3
  • 101
    • 33845788716 scopus 로고    scopus 로고
    • Molecular diversity after a range expansion in heterogeneous environments
    • Wegmann, D., M. Currat, and L. Excoffier. 2006. Molecular diversity after a range expansion in heterogeneous environments. Genetics 174:2009-2020.
    • (2006) Genetics , vol.174 , pp. 2009-2020
    • Wegmann, D.1    Currat, M.2    Excoffier, L.3
  • 102
    • 70350136774 scopus 로고    scopus 로고
    • Efficient approximate Bayesian computation coupled with Markov chain Monte Carlo without likelihood
    • in press
    • Wegmann, D., L. Leuenberger, and L. Excoffier. 2009. Effi cient approximate Bayesian computation coupled with Markov chain Monte Carlo without likelihood. Genetics (in press).
    • (2009) Genetics
    • Wegmann, D.1    Leuenberger, L.2    Excoffier, L.3
  • 103
    • 20344380699 scopus 로고    scopus 로고
    • Simultaneous inference of selection and population growth from patterns of variation in the human genome
    • Williamson, S. H., R. Hernandez, A. Fledel-Alon et al. 2005. Simultaneous inference of selection and population growth from patterns of variation in the human genome Proc. Natl. Acad. Sci. USA 102(22):7882-7887.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , Issue.22 , pp. 7882-7887
    • Williamson, S.H.1    Hernandez, R.2    Fledel-Alon, A.3
  • 104
    • 0031669749 scopus 로고    scopus 로고
    • Genealogical inference from microsatellite data
    • Wilson, I. J., and D. J. Balding. 1998. Genealogical inference from microsatellite data. Genetics 150(1):499-510.
    • (1998) Genetics , vol.150 , Issue.1 , pp. 499-510
    • Wilson, I.J.1    Balding, D.J.2
  • 106
    • 33745591150 scopus 로고    scopus 로고
    • Normal variants of microcephalin and ASPM do not account for brain size variability
    • Woods, R. P., N. B. Freimer, J. A. De Young et al. 2006. Normal variants of microcephalin and ASPM do not account for brain size variability. Hum. Mol. Genet. 15(12):2025-2029.
    • (2006) Hum. Mol. Genet. , vol.15 , Issue.12 , pp. 2025-2029
    • Woods, R.P.1    Freimer, N.B.2    Young, A.D.J.3
  • 107
    • 0742271150 scopus 로고    scopus 로고
    • Genes and speciation
    • Wu, C. I., and C. T. Ting. 2004. Genes and speciation. Nat. Rev. Genet. 5(2):114-122.
    • (2004) Nat. Rev. Genet. , vol.5 , Issue.2 , pp. 114-122
    • Wu, C.I.1    Ting, C.T.2
  • 108
    • 34247520904 scopus 로고    scopus 로고
    • Ongoing adaptive evolution of ASPM, a Brain size determinant in homo sapiens
    • Comment on
    • Yu, F., R. S. Hill, S. F. Schaffner et al. 2007. Comment on "Ongoing Adaptive Evolution of ASPM, a Brain Size Determinant in Homo sapiens." Science 316(5823):370.
    • (2007) Science , vol.316 , Issue.5823 , pp. 370
    • Yu, F.1    Hill, R.S.2    Schaffner, S.F.3


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