-
1
-
-
33751253408
-
Conditional and replicative senescence in Escherichia coli
-
Fredriksson A, Nystrom T. Conditional and replicative senescence in Escherichia coli. Curr Opin Microbiol 2006, 9(6):612-618.
-
(2006)
Curr Opin Microbiol
, vol.9
, Issue.6
, pp. 612-618
-
-
Fredriksson, A.1
Nystrom, T.2
-
2
-
-
0034922414
-
Characterization of an autostimulatory substance produced by Escherichia coli
-
Weichart DH, Kell DB. Characterization of an autostimulatory substance produced by Escherichia coli. Microbiology 2001, 147(Pt 7):1875-1885.
-
(2001)
Microbiology
, vol.147
, Issue.PART 7
, pp. 1875-1885
-
-
Weichart, D.H.1
Kell, D.B.2
-
3
-
-
42349090856
-
Single-cell and population lag times as a function of cell age
-
2293159, 18296533
-
Pin C, Baranyi J. Single-cell and population lag times as a function of cell age. Appl Environ Microbiol 2008, 74(8):2534-2536. 2293159, 18296533.
-
(2008)
Appl Environ Microbiol
, vol.74
, Issue.8
, pp. 2534-2536
-
-
Pin, C.1
Baranyi, J.2
-
4
-
-
33646078117
-
Indirect measurement of the lag time distribution of single cells of Listeria innocua in food
-
1449042, 16597954
-
D'Arrigo M, Garcia de Fernando GD, Velasco de Diego R, Ordonez JA, George SM, Pin C. Indirect measurement of the lag time distribution of single cells of Listeria innocua in food. Appl Environ Microbiol 2006, 72(4):2533-2538. 1449042, 16597954.
-
(2006)
Appl Environ Microbiol
, vol.72
, Issue.4
, pp. 2533-2538
-
-
D'Arrigo, M.1
Garcia de Fernando, G.D.2
Velasco de Diego, R.3
Ordonez, J.A.4
George, S.M.5
Pin, C.6
-
5
-
-
13244296811
-
Identification of genes and proteins induced during the lag and early exponential phase of lager brewing yeasts
-
Brejning J, Arneborg N, Jespersen L. Identification of genes and proteins induced during the lag and early exponential phase of lager brewing yeasts. J Appl Microbiol 2005, 98(2):261-271.
-
(2005)
J Appl Microbiol
, vol.98
, Issue.2
, pp. 261-271
-
-
Brejning, J.1
Arneborg, N.2
Jespersen, L.3
-
6
-
-
0037023838
-
Protein expression during lag phase and growth initiation in Saccharomyces cerevisiae
-
Brejning J, Jespersen L. Protein expression during lag phase and growth initiation in Saccharomyces cerevisiae. Int J Food Microbiol 2002, 75(1-2):27-38.
-
(2002)
Int J Food Microbiol
, vol.75
, Issue.1-2
, pp. 27-38
-
-
Brejning, J.1
Jespersen, L.2
-
7
-
-
17044399754
-
Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit
-
Radonjic M, Andrau JC, Lijnzaad P, Kemmeren P, Kockelkorn TT, van Leenen D, van Berkum NL, Holstege FC. Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit. Mol Cell 2005, 18(2):171-183.
-
(2005)
Mol Cell
, vol.18
, Issue.2
, pp. 171-183
-
-
Radonjic, M.1
Andrau, J.C.2
Lijnzaad, P.3
Kemmeren, P.4
Kockelkorn, T.T.5
van Leenen, D.6
van Berkum, N.L.7
Holstege, F.C.8
-
8
-
-
1642540994
-
Regulation of transcription of compatible solute transporters by the general stress sigma factor, sigmaB, in Listeria monocytogenes
-
321483, 14729706
-
Cetin MS, Zhang C, Hutkins RW, Benson AK. Regulation of transcription of compatible solute transporters by the general stress sigma factor, sigmaB, in Listeria monocytogenes. J Bacteriol 2004, 186(3):794-802. 321483, 14729706.
-
(2004)
J Bacteriol
, vol.186
, Issue.3
, pp. 794-802
-
-
Cetin, M.S.1
Zhang, C.2
Hutkins, R.W.3
Benson, A.K.4
-
9
-
-
1142309683
-
Influence of the sigB gene on the cold stress survival and subsequent recovery of two Listeria monocytogenes serotypes
-
Moorhead SM, Dykes GA. Influence of the sigB gene on the cold stress survival and subsequent recovery of two Listeria monocytogenes serotypes. Int J Food Microbiol 2004, 91(1):63-72.
-
(2004)
Int J Food Microbiol
, vol.91
, Issue.1
, pp. 63-72
-
-
Moorhead, S.M.1
Dykes, G.A.2
-
10
-
-
42349111860
-
Global metabolic profiling of Escherichia coli cultures: an evaluation of methods for quenching and extraction of intracellular metabolites
-
Winder CL, Dunn WB, Schuler S, Broadhurst D, Jarvis R, Stephens GM, Goodacre R. Global metabolic profiling of Escherichia coli cultures: an evaluation of methods for quenching and extraction of intracellular metabolites. Anal Chem 2008, 80(8):2939-2948.
-
(2008)
Anal Chem
, vol.80
, Issue.8
, pp. 2939-2948
-
-
Winder, C.L.1
Dunn, W.B.2
Schuler, S.3
Broadhurst, D.4
Jarvis, R.5
Stephens, G.M.6
Goodacre, R.7
-
11
-
-
0041923788
-
Toward a protein profile of Escherichia coli: comparison to its transcription profile
-
170901, 12878731
-
Corbin RW, Paliy O, Yang F, Shabanowitz J, Platt M, Lyons CE, Root K, McAuliffe J, Jordan MI, Kustu S. Toward a protein profile of Escherichia coli: comparison to its transcription profile. Proc Natl Acad Sci USA 2003, 100(16):9232-9237. 170901, 12878731.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.16
, pp. 9232-9237
-
-
Corbin, R.W.1
Paliy, O.2
Yang, F.3
Shabanowitz, J.4
Platt, M.5
Lyons, C.E.6
Root, K.7
McAuliffe, J.8
Jordan, M.I.9
Kustu, S.10
-
12
-
-
0037174638
-
Systems biology. Life's complexity pyramid
-
Oltvai ZN, Barabasi AL. Systems biology. Life's complexity pyramid. Science 2002, 298(5594):763-764.
-
(2002)
Science
, vol.298
, Issue.5594
, pp. 763-764
-
-
Oltvai, Z.N.1
Barabasi, A.L.2
-
13
-
-
20344379457
-
Topological units of environmental signal processing in the transcriptional regulatory network of Escherichia coli
-
1142363, 15908506
-
Balazsi G, Barabasi AL, Oltvai ZN. Topological units of environmental signal processing in the transcriptional regulatory network of Escherichia coli. Proc Natl Acad Sci USA 2005, 102(22):7841-7846. 1142363, 15908506.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, Issue.22
, pp. 7841-7846
-
-
Balazsi, G.1
Barabasi, A.L.2
Oltvai, Z.N.3
-
14
-
-
33745160404
-
Large-scale identification of protein-protein interaction of Escherichia coli K-12
-
1457052, 16606699
-
Arifuzzaman M, Maeda M, Itoh A, Nishikata K, Takita C, Saito R, Ara T, Nakahigashi K, Huang HC, Hirai A. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res 2006, 16(5):686-691. 1457052, 16606699.
-
(2006)
Genome Res
, vol.16
, Issue.5
, pp. 686-691
-
-
Arifuzzaman, M.1
Maeda, M.2
Itoh, A.3
Nishikata, K.4
Takita, C.5
Saito, R.6
Ara, T.7
Nakahigashi, K.8
Huang, H.C.9
Hirai, A.10
-
15
-
-
38549151156
-
Bacteriome.org--an integrated protein interaction database for E. coli
-
2238847, 17942431, Database
-
Su C, Peregrin-Alvarez JM, Butland G, Phanse S, Fong V, Emili A, Parkinson J. Bacteriome.org--an integrated protein interaction database for E. coli. Nucleic Acids Res 2008, (36 Database):D632-636. 2238847, 17942431.
-
(2008)
Nucleic Acids Res
, Issue.36
-
-
Su, C.1
Peregrin-Alvarez, J.M.2
Butland, G.3
Phanse, S.4
Fong, V.5
Emili, A.6
Parkinson, J.7
-
16
-
-
0034609791
-
The large-scale organization of metabolic networks
-
Jeong H, Tombor B, Albert R, Oltvai ZN, Barabasi AL. The large-scale organization of metabolic networks. Nature 2000, 407(6804):651-654.
-
(2000)
Nature
, vol.407
, Issue.6804
, pp. 651-654
-
-
Jeong, H.1
Tombor, B.2
Albert, R.3
Oltvai, Z.N.4
Barabasi, A.L.5
-
17
-
-
2342648924
-
Integrating high-throughput and computational data elucidates bacterial networks
-
Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. Integrating high-throughput and computational data elucidates bacterial networks. Nature 2004, 429(6987):92-96.
-
(2004)
Nature
, vol.429
, Issue.6987
, pp. 92-96
-
-
Covert, M.W.1
Knight, E.M.2
Reed, J.L.3
Herrgard, M.J.4
Palsson, B.O.5
-
18
-
-
14644396645
-
Functional cartography of complex metabolic networks
-
2175124, 15729348
-
Guimera R, Nunes Amaral LA. Functional cartography of complex metabolic networks. Nature 2005, 433(7028):895-900. 2175124, 15729348.
-
(2005)
Nature
, vol.433
, Issue.7028
, pp. 895-900
-
-
Guimera, R.1
Nunes Amaral, L.A.2
-
19
-
-
0034020583
-
Global properties of the metabolic map of Escherichia coli
-
310896, 10779499
-
Ouzounis CA, Karp PD. Global properties of the metabolic map of Escherichia coli. Genome Res 2000, 10(4):568-576. 310896, 10779499.
-
(2000)
Genome Res
, vol.10
, Issue.4
, pp. 568-576
-
-
Ouzounis, C.A.1
Karp, P.D.2
-
20
-
-
58749106933
-
A simple model of bipartite cooperation for ecological and organizational networks
-
Saavedra S, Reed-Tsochas F, Uzzi B. A simple model of bipartite cooperation for ecological and organizational networks. Nature 2009, 457(7228):463-466.
-
(2009)
Nature
, vol.457
, Issue.7228
, pp. 463-466
-
-
Saavedra, S.1
Reed-Tsochas, F.2
Uzzi, B.3
-
21
-
-
0038483826
-
Emergence of scaling in random networks
-
Barabasi AL, Albert R. Emergence of scaling in random networks. Science 1999, 286(5439):509-512.
-
(1999)
Science
, vol.286
, Issue.5439
, pp. 509-512
-
-
Barabasi, A.L.1
Albert, R.2
-
23
-
-
0042424615
-
The nested assembly of plant-animal mutualistic networks
-
170927, 12881488
-
Bascompte J, Jordano P, Melian CJ, Olesen JM. The nested assembly of plant-animal mutualistic networks. Proc Natl Acad Sci USA 2003, 100(16):9383-9387. 170927, 12881488.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.16
, pp. 9383-9387
-
-
Bascompte, J.1
Jordano, P.2
Melian, C.J.3
Olesen, J.M.4
-
24
-
-
0024557026
-
Physiological and genetic responses of bacteria to osmotic stress
-
372720, 2651863
-
Csonka LN. Physiological and genetic responses of bacteria to osmotic stress. Microbiol Rev 1989, 53(1):121-147. 372720, 2651863.
-
(1989)
Microbiol Rev
, vol.53
, Issue.1
, pp. 121-147
-
-
Csonka, L.N.1
-
25
-
-
22144455041
-
Enhanced trehalose production improves growth of Escherichia coli under osmotic stress
-
1168978, 16000787
-
Purvis JE, Yomano LP, Ingram LO. Enhanced trehalose production improves growth of Escherichia coli under osmotic stress. Appl Environ Microbiol 2005, 71(7):3761-3769. 1168978, 16000787.
-
(2005)
Appl Environ Microbiol
, vol.71
, Issue.7
, pp. 3761-3769
-
-
Purvis, J.E.1
Yomano, L.P.2
Ingram, L.O.3
-
26
-
-
0028117603
-
Sequence analysis identifies the proline dehydrogenase and delta 1-pyrroline-5-carboxylate dehydrogenase domains of the multifunctional Escherichia coli PutA protein
-
Ling M, Allen SW, Wood JM. Sequence analysis identifies the proline dehydrogenase and delta 1-pyrroline-5-carboxylate dehydrogenase domains of the multifunctional Escherichia coli PutA protein. J Mol Biol 1994, 243(5):950-956.
-
(1994)
J Mol Biol
, vol.243
, Issue.5
, pp. 950-956
-
-
Ling, M.1
Allen, S.W.2
Wood, J.M.3
-
28
-
-
34548720319
-
The sigmaS subunit of RNA polymerase as a signal integrator and network master regulator in the general stress response in Escherichia coli
-
Klauck E, Typas A, Hengge R. The sigmaS subunit of RNA polymerase as a signal integrator and network master regulator in the general stress response in Escherichia coli. Sci Prog 2007, 90(Pt 2-3):103-127.
-
(2007)
Sci Prog
, vol.90
, Issue.PART 2-3
, pp. 103-127
-
-
Klauck, E.1
Typas, A.2
Hengge, R.3
-
29
-
-
0029946853
-
Molecular characterization of adiY, a regulatory gene which affects expression of the biodegradative acid-induced arginine decarboxylase gene (adiA) of Escherichia coli
-
Stim-Herndon KP, Flores TM, Bennett GN. Molecular characterization of adiY, a regulatory gene which affects expression of the biodegradative acid-induced arginine decarboxylase gene (adiA) of Escherichia coli. Microbiology 1996, 142:1311-1320.
-
(1996)
Microbiology
, vol.142
, pp. 1311-1320
-
-
Stim-Herndon, K.P.1
Flores, T.M.2
Bennett, G.N.3
-
30
-
-
0033037702
-
The response to stationary-phase stress conditions in Escherichia coli: role and regulation of the glutamic acid decarboxylase system
-
De Biase D, Tramonti A, Bossa F, Visca P. The response to stationary-phase stress conditions in Escherichia coli: role and regulation of the glutamic acid decarboxylase system. Mol Microbiol 1999, 32(6):1198-1211.
-
(1999)
Mol Microbiol
, vol.32
, Issue.6
, pp. 1198-1211
-
-
De Biase, D.1
Tramonti, A.2
Bossa, F.3
Visca, P.4
-
31
-
-
0029073161
-
Comparative analysis of extreme acid survival in Salmonella typhimurium, Shigella flexneri, and Escherichia coli
-
177142, 7608084
-
Lin J, Lee IS, Frey J, Slonczewski JL, Foster JW. Comparative analysis of extreme acid survival in Salmonella typhimurium, Shigella flexneri, and Escherichia coli. J Bacteriol 1995, 177(14):4097-4104. 177142, 7608084.
-
(1995)
J Bacteriol
, vol.177
, Issue.14
, pp. 4097-4104
-
-
Lin, J.1
Lee, I.S.2
Frey, J.3
Slonczewski, J.L.4
Foster, J.W.5
-
32
-
-
0026443939
-
Functional differences between manganese and iron superoxide dismutases in Escherichia coli K-12
-
Hopkin KA, Papazian MA, Steinman HM. Functional differences between manganese and iron superoxide dismutases in Escherichia coli K-12. J Biol Chem 1992, 267(34):24253-24258.
-
(1992)
J Biol Chem
, vol.267
, Issue.34
, pp. 24253-24258
-
-
Hopkin, K.A.1
Papazian, M.A.2
Steinman, H.M.3
-
33
-
-
0028032403
-
Escherichia coli expresses a copper- and zinc-containing superoxide dismutase
-
Benov LT, Fridovich I. Escherichia coli expresses a copper- and zinc-containing superoxide dismutase. J Biol Chem 1994, 269(41):25310-25314.
-
(1994)
J Biol Chem
, vol.269
, Issue.41
, pp. 25310-25314
-
-
Benov, L.T.1
Fridovich, I.2
-
34
-
-
33746317789
-
Effect of environmental stresses on the mean and distribution of individual cell lag times of Escherichia coli O157:H7
-
Li Y, Odumeru JA, Griffiths M, McKellar RC. Effect of environmental stresses on the mean and distribution of individual cell lag times of Escherichia coli O157:H7. Int J Food Microbiol 2006, 110(3):278-285.
-
(2006)
Int J Food Microbiol
, vol.110
, Issue.3
, pp. 278-285
-
-
Li, Y.1
Odumeru, J.A.2
Griffiths, M.3
McKellar, R.C.4
-
35
-
-
0026795635
-
Protein oxidation and aging
-
Stadtman ER. Protein oxidation and aging. Science 1992, 257(5074):1220-1224.
-
(1992)
Science
, vol.257
, Issue.5074
, pp. 1220-1224
-
-
Stadtman, E.R.1
-
36
-
-
0027787823
-
The activity of sigma E, an Escherichia coli heat-inducible sigma-factor, is modulated by expression of outer membrane proteins
-
Mecsas J, Rouviere PE, Erickson JW, Donohue TJ, Gross CA. The activity of sigma E, an Escherichia coli heat-inducible sigma-factor, is modulated by expression of outer membrane proteins. Genes Dev 1993, 7(12B):2618-2628.
-
(1993)
Genes Dev
, vol.7 B
, Issue.12
, pp. 2618-2628
-
-
Mecsas, J.1
Rouviere, P.E.2
Erickson, J.W.3
Donohue, T.J.4
Gross, C.A.5
-
37
-
-
0025063473
-
Roles and regulation of the heat shock sigma factor sigma 32 in Escherichia coli
-
Yura T, Kawasaki Y, Kusukawa N, Nagai H, Wada C, Yano R. Roles and regulation of the heat shock sigma factor sigma 32 in Escherichia coli. Antonie Van Leeuwenhoek 1990, 58(3):187-190.
-
(1990)
Antonie Van Leeuwenhoek
, vol.58
, Issue.3
, pp. 187-190
-
-
Yura, T.1
Kawasaki, Y.2
Kusukawa, N.3
Nagai, H.4
Wada, C.5
Yano, R.6
-
38
-
-
0030611694
-
SigmaE is an essential sigma factor in Escherichia coli
-
179621, 9352942
-
De Las Penas A, Connolly L, Gross CA. SigmaE is an essential sigma factor in Escherichia coli. J Bacteriol 1997, 179(21):6862-6864. 179621, 9352942.
-
(1997)
J Bacteriol
, vol.179
, Issue.21
, pp. 6862-6864
-
-
De Las Penas, A.1
Connolly, L.2
Gross, C.A.3
-
39
-
-
24944557141
-
Differential roles of the universal stress proteins of Escherichia coli in oxidative stress resistance, adhesion, and motility
-
1236625, 16159758
-
Nachin L, Nannmark U, Nystrom T. Differential roles of the universal stress proteins of Escherichia coli in oxidative stress resistance, adhesion, and motility. J Bacteriol 2005, 187(18):6265-6272. 1236625, 16159758.
-
(2005)
J Bacteriol
, vol.187
, Issue.18
, pp. 6265-6272
-
-
Nachin, L.1
Nannmark, U.2
Nystrom, T.3
-
40
-
-
0027960261
-
Successive action of Escherichia coli chaperones in vivo
-
Gaitanaris GA, Vysokanov A, Hung SC, Gottesman ME, Gragerov A. Successive action of Escherichia coli chaperones in vivo. Mol Microbiol 1994, 14(5):861-869.
-
(1994)
Mol Microbiol
, vol.14
, Issue.5
, pp. 861-869
-
-
Gaitanaris, G.A.1
Vysokanov, A.2
Hung, S.C.3
Gottesman, M.E.4
Gragerov, A.5
-
41
-
-
33646590587
-
WrbA from Escherichia coli and Archaeoglobus fulgidus is an NAD(P)H:quinone oxidoreductase
-
1482846, 16672604
-
Patridge EV, Ferry JG. WrbA from Escherichia coli and Archaeoglobus fulgidus is an NAD(P)H:quinone oxidoreductase. J Bacteriol 2006, 188(10):3498-3506. 1482846, 16672604.
-
(2006)
J Bacteriol
, vol.188
, Issue.10
, pp. 3498-3506
-
-
Patridge, E.V.1
Ferry, J.G.2
-
42
-
-
13444262374
-
EcoCyc: a comprehensive database resource for Escherichia coli
-
540062, 15608210, Database
-
Keseler IM, Collado-Vides J, Gama-Castro S, Ingraham J, Paley S, Paulsen IT, Peralta-Gil M, Karp PD. EcoCyc: a comprehensive database resource for Escherichia coli. Nucleic Acids Res 2005, (33 Database):D334-337. 540062, 15608210.
-
(2005)
Nucleic Acids Res
, Issue.33
-
-
Keseler, I.M.1
Collado-Vides, J.2
Gama-Castro, S.3
Ingraham, J.4
Paley, S.5
Paulsen, I.T.6
Peralta-Gil, M.7
Karp, P.D.8
-
43
-
-
0036889035
-
Regulation of the hydrogenase-4 operon of Escherichia coli by the sigma(54)-dependent transcriptional activators FhlA and HyfR
-
135417, 12426353
-
Skibinski DA, Golby P, Chang YS, Sargent F, Hoffman R, Harper R, Guest JR, Attwood MM, Berks BC, Andrews SC. Regulation of the hydrogenase-4 operon of Escherichia coli by the sigma(54)-dependent transcriptional activators FhlA and HyfR. J Bacteriol 2002, 184(23):6642-6653. 135417, 12426353.
-
(2002)
J Bacteriol
, vol.184
, Issue.23
, pp. 6642-6653
-
-
Skibinski, D.A.1
Golby, P.2
Chang, Y.S.3
Sargent, F.4
Hoffman, R.5
Harper, R.6
Guest, J.R.7
Attwood, M.M.8
Berks, B.C.9
Andrews, S.C.10
-
44
-
-
0027214685
-
Interplay between the membrane-associated UhpB and UhpC regulatory proteins
-
204968, 8349544
-
Island MD, Kadner RJ. Interplay between the membrane-associated UhpB and UhpC regulatory proteins. J Bacteriol 1993, 175(16):5028-5034. 204968, 8349544.
-
(1993)
J Bacteriol
, vol.175
, Issue.16
, pp. 5028-5034
-
-
Island, M.D.1
Kadner, R.J.2
-
45
-
-
0034537304
-
Interplay between three global regulatory proteins mediates oxygen regulation of the Escherichia coli cytochrome d oxidase (cydAB) operon
-
Govantes F, Orjalo AV, Gunsalus RP. Interplay between three global regulatory proteins mediates oxygen regulation of the Escherichia coli cytochrome d oxidase (cydAB) operon. Mol Microbiol 2000, 38(5):1061-1073.
-
(2000)
Mol Microbiol
, vol.38
, Issue.5
, pp. 1061-1073
-
-
Govantes, F.1
Orjalo, A.V.2
Gunsalus, R.P.3
-
46
-
-
0027980255
-
Anaerobic regulation of the hydrogenase 1 (hya) operon of Escherichia coli
-
196730, 8071220
-
Brondsted L, Atlung T. Anaerobic regulation of the hydrogenase 1 (hya) operon of Escherichia coli. J Bacteriol 1994, 176(17):5423-5428. 196730, 8071220.
-
(1994)
J Bacteriol
, vol.176
, Issue.17
, pp. 5423-5428
-
-
Brondsted, L.1
Atlung, T.2
-
47
-
-
0034045853
-
Overexpression, purification, and crystallization of the membrane-bound fumarate reductase from Escherichia coli
-
Luna-Chavez C, Iverson TM, Rees DC, Cecchini G. Overexpression, purification, and crystallization of the membrane-bound fumarate reductase from Escherichia coli. Protein Expr Purif 2000, 19(1):188-196.
-
(2000)
Protein Expr Purif
, vol.19
, Issue.1
, pp. 188-196
-
-
Luna-Chavez, C.1
Iverson, T.M.2
Rees, D.C.3
Cecchini, G.4
-
48
-
-
0037240787
-
A new Escherichia coli metabolic competency: growth on fatty acids by a novel anaerobic beta-oxidation pathway
-
Campbell JW, Morgan-Kiss RM, Cronan JE. A new Escherichia coli metabolic competency: growth on fatty acids by a novel anaerobic beta-oxidation pathway. Mol Microbiol 2003, 47(3):793-805.
-
(2003)
Mol Microbiol
, vol.47
, Issue.3
, pp. 793-805
-
-
Campbell, J.W.1
Morgan-Kiss, R.M.2
Cronan, J.E.3
-
49
-
-
0037131410
-
CaiT of Escherichia coli, a new transporter catalyzing L-carnitine/gamma-butyrobetaine exchange
-
Jung H, Buchholz M, Clausen J, Nietschke M, Revermann A, Schmid R, Jung K. CaiT of Escherichia coli, a new transporter catalyzing L-carnitine/gamma-butyrobetaine exchange. J Biol Chem 2002, 277(42):39251-39258.
-
(2002)
J Biol Chem
, vol.277
, Issue.42
, pp. 39251-39258
-
-
Jung, H.1
Buchholz, M.2
Clausen, J.3
Nietschke, M.4
Revermann, A.5
Schmid, R.6
Jung, K.7
-
50
-
-
0032464663
-
What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli
-
107313, 9657988
-
Peekhaus N, Conway T. What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli. J Bacteriol 1998, 180(14):3495-3502. 107313, 9657988.
-
(1998)
J Bacteriol
, vol.180
, Issue.14
, pp. 3495-3502
-
-
Peekhaus, N.1
Conway, T.2
-
51
-
-
0036136174
-
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons
-
134747, 11741871
-
Yew WS, Gerlt JA. Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons. J Bacteriol 2002, 184(1):302-306. 134747, 11741871.
-
(2002)
J Bacteriol
, vol.184
, Issue.1
, pp. 302-306
-
-
Yew, W.S.1
Gerlt, J.A.2
-
52
-
-
44849093465
-
Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts
-
2413157, 18340041
-
Cho BK, Knight EM, Barrett CL, Palsson BO. Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts. Genome Res 2008, 18(6):900-910. 2413157, 18340041.
-
(2008)
Genome Res
, vol.18
, Issue.6
, pp. 900-910
-
-
Cho, B.K.1
Knight, E.M.2
Barrett, C.L.3
Palsson, B.O.4
-
53
-
-
0026470852
-
The Fis protein: it's not just for DNA inversion anymore
-
Finkel SE, Johnson RC. The Fis protein: it's not just for DNA inversion anymore. Mol Microbiol 1992, 6(22):3257-3265.
-
(1992)
Mol Microbiol
, vol.6
, Issue.22
, pp. 3257-3265
-
-
Finkel, S.E.1
Johnson, R.C.2
-
54
-
-
0036271217
-
Studies on the role of the metK gene product of Escherichia coli K-12
-
Wei Y, Newman EB. Studies on the role of the metK gene product of Escherichia coli K-12. Mol Microbiol 2002, 43(6):1651-1656.
-
(2002)
Mol Microbiol
, vol.43
, Issue.6
, pp. 1651-1656
-
-
Wei, Y.1
Newman, E.B.2
-
55
-
-
0141651685
-
Abnormal growth of polyamine-deficient Escherichia coli mutant is partially caused by oxidative stress-induced damage
-
Jung IL, Oh TJ, Kim IG. Abnormal growth of polyamine-deficient Escherichia coli mutant is partially caused by oxidative stress-induced damage. Arch Biochem Biophys 2003, 418(2):125-132.
-
(2003)
Arch Biochem Biophys
, vol.418
, Issue.2
, pp. 125-132
-
-
Jung, I.L.1
Oh, T.J.2
Kim, I.G.3
-
56
-
-
0033842544
-
Secretion of virulence determinants by the general secretory pathway in gram-negative pathogens: an evolving story
-
Stathopoulos C, Hendrixson DR, Thanassi DG, Hultgren SJ, St Geme JW, Curtiss R. Secretion of virulence determinants by the general secretory pathway in gram-negative pathogens: an evolving story. Microbes Infect 2000, 2(9):1061-1072.
-
(2000)
Microbes Infect
, vol.2
, Issue.9
, pp. 1061-1072
-
-
Stathopoulos, C.1
Hendrixson, D.R.2
Thanassi, D.G.3
Hultgren, S.J.4
St Geme, J.W.5
Curtiss, R.6
-
57
-
-
0029924909
-
The cryptic general secretory pathway (gsp) operon of Escherichia coli K-12 encodes functional proteins
-
178124, 8655552
-
Francetic O, Pugsley AP. The cryptic general secretory pathway (gsp) operon of Escherichia coli K-12 encodes functional proteins. J Bacteriol 1996, 178(12):3544-3549. 178124, 8655552.
-
(1996)
J Bacteriol
, vol.178
, Issue.12
, pp. 3544-3549
-
-
Francetic, O.1
Pugsley, A.P.2
-
58
-
-
0027443625
-
TdcA, a transcriptional activator of the tdcABC operon of Escherichia coli, is a member of the LysR family of proteins
-
Ganduri YL, Sadda SR, Datta MW, Jambukeswaran RK, Datta P. TdcA, a transcriptional activator of the tdcABC operon of Escherichia coli, is a member of the LysR family of proteins. Mol Gen Genet 1993, 240(3):395-402.
-
(1993)
Mol Gen Genet
, vol.240
, Issue.3
, pp. 395-402
-
-
Ganduri, Y.L.1
Sadda, S.R.2
Datta, M.W.3
Jambukeswaran, R.K.4
Datta, P.5
-
59
-
-
34548356378
-
The RcnRA (YohLM) system of Escherichia coli: a connection between nickel, cobalt and iron homeostasis
-
Koch D, Nies DH, Grass G. The RcnRA (YohLM) system of Escherichia coli: a connection between nickel, cobalt and iron homeostasis. Biometals 2007, 20(5):759-771.
-
(2007)
Biometals
, vol.20
, Issue.5
, pp. 759-771
-
-
Koch, D.1
Nies, D.H.2
Grass, G.3
-
60
-
-
13944272143
-
Aging and death in an organism that reproduces by morphologically symmetric division
-
546039, 15685293
-
Stewart EJ, Madden R, Paul G, Taddei F. Aging and death in an organism that reproduces by morphologically symmetric division. PLoS Biology 2005, 3(2):e45. 546039, 15685293.
-
(2005)
PLoS Biology
, vol.3
, Issue.2
-
-
Stewart, E.J.1
Madden, R.2
Paul, G.3
Taddei, F.4
-
61
-
-
0042766188
-
Comparative genomic indexing reveals the phylogenomics of Escherichia coli pathogens
-
165989, 12874348
-
Anjum MF, Lucchini S, Thompson A, Hinton JC, Woodward MJ. Comparative genomic indexing reveals the phylogenomics of Escherichia coli pathogens. Infect Immun 2003, 71(8):4674-4683. 165989, 12874348.
-
(2003)
Infect Immun
, vol.71
, Issue.8
, pp. 4674-4683
-
-
Anjum, M.F.1
Lucchini, S.2
Thompson, A.3
Hinton, J.C.4
Woodward, M.J.5
-
62
-
-
12244253722
-
Unravelling the biology of macrophage infection by gene expression profiling of intracellular Salmonella enterica
-
Eriksson S, Lucchini S, Thompson A, Rhen M, Hinton JC. Unravelling the biology of macrophage infection by gene expression profiling of intracellular Salmonella enterica. Mol Microbiol 2003, 47(1):103-118.
-
(2003)
Mol Microbiol
, vol.47
, Issue.1
, pp. 103-118
-
-
Eriksson, S.1
Lucchini, S.2
Thompson, A.3
Rhen, M.4
Hinton, J.C.5
-
63
-
-
38949117079
-
Use of genomic DNA control features and predicted operon structure in microarray data analysis: ArrayLeaRNA - a Bayesian approach
-
2228326, 18021437
-
Pin C, Reuter M. Use of genomic DNA control features and predicted operon structure in microarray data analysis: ArrayLeaRNA - a Bayesian approach. BMC Bioinformatics 2007, 8(1):455. 2228326, 18021437.
-
(2007)
BMC Bioinformatics
, vol.8
, Issue.1
, pp. 455
-
-
Pin, C.1
Reuter, M.2
-
64
-
-
38549140094
-
RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation
-
2238961, 18158297, Database
-
Gama-Castro S, Jimenez-Jacinto V, Peralta-Gil M, Santos-Zavaleta A, Penaloza-Spinola MI, Contreras-Moreira B, Segura-Salazar J, Muniz-Rascado L, Martinez-Flores I, Salgado H. RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation. Nucleic Acids Res 2008, (36 Database):D120-124. 2238961, 18158297.
-
(2008)
Nucleic Acids Res
, Issue.36
-
-
Gama-Castro, S.1
Jimenez-Jacinto, V.2
Peralta-Gil, M.3
Santos-Zavaleta, A.4
Penaloza-Spinola, M.I.5
Contreras-Moreira, B.6
Segura-Salazar, J.7
Muniz-Rascado, L.8
Martinez-Flores, I.9
Salgado, H.10
-
65
-
-
71049161121
-
KEGG maps
-
KEGG maps. , http://www.genome.ad.jp/kegg/pathway.html
-
-
-
-
66
-
-
84896547648
-
CMR-TIGR database
-
CMR-TIGR database. , http://cmr.tigr.org/tigr-scripts/CMR/CmrHomePage.cgi
-
-
-
-
67
-
-
71049124303
-
PAJEK
-
PAJEK. , http://vlado.fmf.uni-lj.si/pub/networks/pajek/
-
-
-
-
68
-
-
71049133013
-
Cytoscape
-
Cytoscape. , http://cytoscape.org/
-
-
-
|