-
1
-
-
0021755638
-
Characterization of the copper(II)- and nickel(II)-transport site of human serum albumin. Studies of copper(II) and nickel(II) binding to peptide 1-24 of human serum albumin by 13C and 1H NMR spectroscopy
-
Laussac, J. P.; Sarkar, B. Characterization of the copper(II)- and nickel(II)-transport site of human serum albumin. Studies of copper(II) and nickel(II) binding to peptide 1-24 of human serum albumin by 13C and 1H NMR spectroscopy. Biochemistry 1984, 23 (12), 2832-2838
-
(1984)
Biochemistry
, vol.23
, Issue.12
, pp. 2832-2838
-
-
Laussac, J.P.1
Sarkar, B.2
-
2
-
-
0020696383
-
Enhancement of antitumor activity of ascorbate against Ehrlich ascites tumor cells by the copper:glycylglycylhistidine complex
-
Kimoto, E.; Tanaka, H.; Gyotoku, J.; Morishige, F.; Pauling, L. Enhancement of antitumor activity of ascorbate against Ehrlich ascites tumor cells by the copper:glycylglycylhistidine complex. Cancer Res. 1983, 43 (2), 824-828
-
(1983)
Cancer Res.
, vol.43
, Issue.2
, pp. 824-828
-
-
Kimoto, E.1
Tanaka, H.2
Gyotoku, J.3
Morishige, F.4
Pauling, L.5
-
3
-
-
34447127016
-
Influence of stereochemistry and redox potentials on the singleand double-strand DNA cleavage efficiency of Cu(II) and Ni(II) Lys-Gly-His-derived ATCUN metallopeptides
-
Jin, Y.; Lewis, M. A.; Gokhale, N. H.; Long, E. C.; Cowan, J. A. Influence of stereochemistry and redox potentials on the singleand double-strand DNA cleavage efficiency of Cu(II) and Ni(II) Lys-Gly-His-derived ATCUN metallopeptides. J. Am. Chem. Soc. 2007, 129 (26), 8353-8361
-
(2007)
J. Am. Chem. Soc.
, vol.129
, Issue.26
, pp. 8353-8361
-
-
Jin, Y.1
Lewis, M.A.2
Gokhale, N.H.3
Long, E.C.4
Cowan, J.A.5
-
4
-
-
0029050768
-
Neuromedin C binds Cu(II) and Ni(II) via the ATCUN motif: Implications for the CNS and cancer growth
-
Harford, C.; Sarkar, B. Neuromedin C binds Cu(II) and Ni(II) via the ATCUN motif: implications for the CNS and cancer growth. Biochem. Biophys. Res. Commun. 1995, 209 (3), 877-882
-
(1995)
Biochem. Biophys. Res. Commun.
, vol.209
, Issue.3
, pp. 877-882
-
-
Harford, C.1
Sarkar, B.2
-
5
-
-
61749097242
-
Pleomorphic copper coordination by Alzheimer's disease amyloid-beta peptide
-
Drew, S. C.; Noble, C. J.; Masters, C. L.; Hanson, G. R.; Barnham, K. J. Pleomorphic copper coordination by Alzheimer's disease amyloid-beta peptide. J. Am. Chem. Soc. 2009, 131 (3), 1195-1207
-
(2009)
J. Am. Chem. Soc.
, vol.131
, Issue.3
, pp. 1195-1207
-
-
Drew, S.C.1
Noble, C.J.2
Masters, C.L.3
Hanson, G.R.4
Barnham, K.J.5
-
6
-
-
56449093681
-
2+ and tryptophan
-
2+ and tryptophan. J. Am. Chem. Soc. 2008, 130 (46), 15266-15267
-
(2008)
J. Am. Chem. Soc.
, vol.130
, Issue.46
, pp. 15266-15267
-
-
Yorita, H.1
Otomo, K.2
Hiramatsu, H.3
Toyama, A.4
Miura, T.5
Takeuchi, H.6
-
7
-
-
56249119177
-
Structural and biological analysis of the metal sites of Escherichia coli hydrogenase accessory protein HypB
-
Dias, A. V.; Mulvihill, C. M.; Leach, M. R.; Pickering, I. J.; George, G. N.; Zamble, D. B. Structural and biological analysis of the metal sites of Escherichia coli hydrogenase accessory protein HypB. Biochemistry 2008, 47 (46), 11981-11991
-
(2008)
Biochemistry
, vol.47
, Issue.46
, pp. 11981-11991
-
-
Dias, A.V.1
Mulvihill, C.M.2
Leach, M.R.3
Pickering, I.J.4
George, G.N.5
Zamble, D.B.6
-
8
-
-
54849406991
-
A high-affinity metal-binding peptide from Escherichia coli HypB
-
Chung, K. C.; Cao, L.; Dias, A. V.; Pickering, I. J.; George, G. N.; Zamble, D. B. A high-affinity metal-binding peptide from Escherichia coli HypB. J. Am. Chem. Soc. 2008, 130 (43), 14056-14057
-
(2008)
J. Am. Chem. Soc.
, vol.130
, Issue.43
, pp. 14056-14057
-
-
Chung, K.C.1
Cao, L.2
Dias, A.V.3
Pickering, I.J.4
George, G.N.5
Zamble, D.B.6
-
9
-
-
31544470937
-
Targeted cleavage of HIV rev response element RNA by metallopeptide complexes
-
Jin, Y.; Cowan, J. A. Targeted cleavage of HIV rev response element RNA by metallopeptide complexes. J. Am. Chem. Soc. 2006, 128 (2), 410-411
-
(2006)
J. Am. Chem. Soc.
, vol.128
, Issue.2
, pp. 410-411
-
-
Jin, Y.1
Cowan, J.A.2
-
10
-
-
0037184479
-
The ATCUN domain as a probe of intermolecular interactions: Application to calmodulin-peptide complexes
-
Mal, T. K.; Ikura, M.; Kay, L. E. The ATCUN domain as a probe of intermolecular interactions: application to calmodulin-peptide complexes. J. Am. Chem. Soc. 2002, 124 (47), 14002-14003
-
(2002)
J. Am. Chem. Soc.
, vol.124
, Issue.47
, pp. 14002-14003
-
-
Mal, T.K.1
Ikura, M.2
Kay, L.E.3
-
11
-
-
38849155844
-
DNA cleavage study using copper (II)-GlyAibHis: A tripeptide complex based on ATCUN peptide motifs
-
Singh, R. K.; Sharma, N. K.; Prasad, R.; Singh, U. P. DNA cleavage study using copper (II)-GlyAibHis: a tripeptide complex based on ATCUN peptide motifs. Protein Pept. Lett. 2008, 15 (1), 13-19
-
(2008)
Protein Pept. Lett.
, vol.15
, Issue.1
, pp. 13-19
-
-
Singh, R.K.1
Sharma, N.K.2
Prasad, R.3
Singh, U.P.4
-
12
-
-
33845921608
-
Metal-binding and nuclease activity of an antimicrobial peptide analogue of the salivary histatin 5
-
Melino, S.; Gallo, M.; Trotta, E.; Mondello, F.; Paci, M.; Petruzzelli, R. Metal-binding and nuclease activity of an antimicrobial peptide analogue of the salivary histatin 5. Biochemistry 2006, 45 (51), 15373-15383
-
(2006)
Biochemistry
, vol.45
, Issue.51
, pp. 15373-15383
-
-
Melino, S.1
Gallo, M.2
Trotta, E.3
Mondello, F.4
Paci, M.5
Petruzzelli, R.6
-
13
-
-
0000406389
-
Amino Terminal Cu(II)- and Ni(II)-Binding (ATCUN) Motif of Proteins and Peptides: Metal Binding, DNA Cleavage, and Other Properties
-
Harford, C.; Sarkar, B. Amino Terminal Cu(II)- and Ni(II)-Binding (ATCUN) Motif of Proteins and Peptides: Metal Binding, DNA Cleavage, and Other Properties. Acc. Chem. Res. 1997, 30 (3), 123-130
-
(1997)
Acc. Chem. Res.
, vol.30
, Issue.3
, pp. 123-130
-
-
Harford, C.1
Sarkar, B.2
-
14
-
-
10844293517
-
ATCUN-like metal-binding motifs in proteins: Identification and characterization by crystal structure and sequence analysis
-
Sankararamakrishnan, R.; Verma, S.; Kumar, S. ATCUN-like metal-binding motifs in proteins: identification and characterization by crystal structure and sequence analysis. Proteins 2005, 58 (1), 211-221
-
(2005)
Proteins
, vol.58
, Issue.1
, pp. 211-221
-
-
Sankararamakrishnan, R.1
Verma, S.2
Kumar, S.3
-
16
-
-
11144308782
-
Charge and hydrophobicity patterning along the sequence predicts the folding mechanism and aggregation of proteins: A computational approach
-
Zbilut, J. P.; Giuliani, A.; Colosimo, A.; Mitchell, J. C.; Colafranceschi, M.; Marwan, N.; Webber, C. L., Jr.; Uversky, V. N. Charge and hydrophobicity patterning along the sequence predicts the folding mechanism and aggregation of proteins: a computational approach. J. Proteome Res. 2004, 3 (6), 1243-1253
-
(2004)
J. Proteome Res.
, vol.3
, Issue.6
, pp. 1243-1253
-
-
Zbilut, J.P.1
Giuliani, A.2
Colosimo, A.3
Mitchell, J.C.4
Colafranceschi, M.5
Marwan, N.6
Webber Jr., C.L.7
Uversky, V.N.8
-
17
-
-
38349113850
-
Physicochemical feature-based classification of amino acid mutations
-
Shen, B.; Bai, J.; V, M. Physicochemical feature-based classification of amino acid mutations. Protein Eng., Des. Sel. 2008, 21 (1), 37-44.
-
(2008)
Protein Eng., Des. Sel.
, vol.21
, Issue.1
, pp. 37-44
-
-
Shen, B.1
Bai, J.2
V, M.3
-
18
-
-
41949141017
-
Proteins as networks: Usefulness of graph theory in protein science
-
Krishnan, A.; Zbilut, J. P.; Tomita, M.; Giuliani, A. Proteins as networks: usefulness of graph theory in protein science. Curr. Protein Pept. Sci. 2008, 9 (1), 28-38.
-
(2008)
Curr. Protein Pept. Sci.
, vol.9
, Issue.1
, pp. 28-38
-
-
Krishnan, A.1
Zbilut, J.P.2
Tomita, M.3
Giuliani, A.4
-
19
-
-
47749130443
-
Implications from a network-based topological analysis of ubiquitin unfolding simulations
-
Krishnan, A.; Giuliani, A.; Zbilut, J. P.; Tomita, M. Implications from a network-based topological analysis of ubiquitin unfolding simulations. PLoS ONE 2008, 3 (5), e2149.
-
(2008)
PLoS ONE
, vol.3
, Issue.5
-
-
Krishnan, A.1
Giuliani, A.2
Zbilut, J.P.3
Tomita, M.4
-
20
-
-
34248532344
-
Essentiality is an emergent property of metabolic network wiring
-
DOI 10.1016/j.febslet.2007.04.067, PII S0014579307004632
-
Palumbo, M. C.; Colosimo, A.; Giuliani, A.; Farina, L. Essentiality is an emergent property of metabolic network wiring. FEBS Lett. 2007, 581 (13), 2485-2489 (Pubitemid 46764712)
-
(2007)
FEBS Letters
, vol.581
, Issue.13
, pp. 2485-2489
-
-
Palumbo, M.C.1
Colosimo, A.2
Giuliani, A.3
Farina, L.4
-
21
-
-
38349055557
-
Indeterminacy of reverse engineering of gene regulatory networks: The curse of gene elasticity
-
DOI 10.1371/journal.pone.0000562
-
Krishnan, A.; Giuliani, A.; Tomita, M. Indeterminacy of reverse engineering of Gene Regulatory Networks: the curse of gene elasticity. PLoS ONE 2007, 2 (6), e562. (Pubitemid 351260403)
-
(2007)
PLoS ONE
, vol.2
, Issue.6
-
-
Krishnan, A.1
Giuliani, A.2
Tomita, M.3
-
22
-
-
32144438837
-
Metabolic pathways variability and sequence/networks comparisons
-
DOI 10.1186/1471-2105-7-24
-
Tun, K.; Dhar, P. K.; Palumbo, M. C.; Giuliani, A. Metabolic pathways variability and sequence/networks comparisons. BMC Bioinformatics 2006, 7, 24. (Pubitemid 43205343)
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 24
-
-
Tun, K.1
Dhar, P.K.2
Palumbo, M.C.3
Giuliani, A.4
-
23
-
-
67649850616
-
Numerical characterization of protein sequences and application to voltage-gated sodium channel α subunit phylogeny
-
Nandy, A.; Ghosh, A.; Nandy, P. Numerical characterization of protein sequences and application to voltage-gated sodium channel α subunit phylogeny. In Silico Biol. 2009, 9, 8.
-
(2009)
In Silico Biol.
, vol.9
, pp. 8
-
-
Nandy, A.1
Ghosh, A.2
Nandy, P.3
-
24
-
-
0034266159
-
On 3-D graphical representation of DNA primary sequences and their numerical characterization
-
Randic, M.; Vracko, M.; Nandy, A.; Basak, S. C. On 3-D graphical representation of DNA primary sequences and their numerical characterization. J. Chem. Inf. Comput. Sci. 2000, 40 (5), 1235-1244
-
(2000)
J. Chem. Inf. Comput. Sci.
, vol.40
, Issue.5
, pp. 1235-1244
-
-
Randic, M.1
Vracko, M.2
Nandy, A.3
Basak, S.C.4
-
25
-
-
0034220552
-
Simple numerical descriptor for quantifying effect of toxic substances on DNA sequences
-
Nandy, A.; Basak, S. C. Simple numerical descriptor for quantifying effect of toxic substances on DNA sequences. J. Chem. Inf. Comput. Sci. 2000, 40 (4), 915-919
-
(2000)
J. Chem. Inf. Comput. Sci.
, vol.40
, Issue.4
, pp. 915-919
-
-
Nandy, A.1
Basak, S.C.2
-
26
-
-
34250884662
-
Graphical representation and numerical characterization of H5N1 avian flu neuraminidase gene sequence
-
Nandy, A.; Basak, S. C.; Gute, B. D. Graphical representation and numerical characterization of H5N1 avian flu neuraminidase gene sequence. J. Chem. Inf. Model 2007, 47 (3), 945-951
-
(2007)
J. Chem. Inf. Model
, vol.47
, Issue.3
, pp. 945-951
-
-
Nandy, A.1
Basak, S.C.2
Gute, B.D.3
-
27
-
-
5444223083
-
Analysis of similarity/dissimilarity of DNA sequences based on nonoverlapping triplets of nucleotide bases
-
Liao, B.; Wang, T. M. Analysis of similarity/dissimilarity of DNA sequences based on nonoverlapping triplets of nucleotide bases. J. Chem. Inf. Comput. Sci. 2004, 44 (5), 1666-1670
-
(2004)
J. Chem. Inf. Comput. Sci.
, vol.44
, Issue.5
, pp. 1666-1670
-
-
Liao, B.1
Wang, T.M.2
-
28
-
-
25644443222
-
Graphical approach to analyzing DNA sequences
-
Liao, B.; Ding, K. Graphical approach to analyzing DNA sequences. J. Comput. Chem. 2005, 26 (14), 1519-1523
-
(2005)
J. Comput. Chem.
, vol.26
, Issue.14
, pp. 1519-1523
-
-
Liao, B.1
Ding, K.2
-
29
-
-
0033628753
-
Condensed representation of DNA primary sequences
-
Randic, M. Condensed representation of DNA primary sequences. J. Chem. Inf. Comput. Sci. 2000, 40 (1), 50-56
-
(2000)
J. Chem. Inf. Comput. Sci.
, vol.40
, Issue.1
, pp. 50-56
-
-
Randic, M.1
-
30
-
-
0034266159
-
On 3-D Graphical Representation of DNA Primary Sequences and Their Numerical Characterization
-
Randiè, M.; Vraèko, M.; Nandy, A.; Basak, S. C. On 3-D Graphical Representation of DNA Primary Sequences and Their Numerical Characterization. J. Chem. Inf. Comput. Sci. 2000, 40, 1235-1244
-
(2000)
J. Chem. Inf. Comput. Sci.
, vol.40
, pp. 1235-1244
-
-
Randiè, M.1
Vraèko, M.2
Nandy, A.3
Basak, S.C.4
-
31
-
-
0035324931
-
Characterization of DNA Primary Sequences Based on the Average Distances between Bases
-
DOI 10.1021/ci0000981
-
Randic, M.; Basak, S. C. Characterization of DNA primary sequences based on the average distances between bases. J. Chem. Inf. Comput. Sci. 2001, 41 (3), 561-568 (Pubitemid 33650251)
-
(2001)
Journal of Chemical Information and Computer Sciences
, vol.41
, Issue.3
, pp. 561-568
-
-
Randic, M.1
Basak, S.C.2
-
32
-
-
0037363676
-
On a four-dimensional representation of DNA primary sequences
-
Randic, M.; Balaban, A. T. On a four-dimensional representation of DNA primary sequences. J. Chem. Inf. Comput. Sci. 2003, 43 (2), 532-539
-
(2003)
J. Chem. Inf. Comput. Sci.
, vol.43
, Issue.2
, pp. 532-539
-
-
Randic, M.1
Balaban, A.T.2
-
33
-
-
34447633537
-
Distribution moments of 2D-graphs as descriptors of DNA sequences
-
DOI 10.1016/j.cplett.2007.06.088, PII S0009261407008093
-
Bielinska-Waz, D.; Nowak, W.; Waz, P.; Nandy, A.; Clark, T. Distribution Moments of 2D-graphs as Descriptors of DNA Sequences. Chem. Phys. Lett. 2007, 443, 408-413 (Pubitemid 47088388)
-
(2007)
Chemical Physics Letters
, vol.443
, Issue.4-6
, pp. 408-413
-
-
Bielinska-Waz, D.1
Nowak, W.2
Waz, P.3
Nandy, A.4
Clark, T.5
-
34
-
-
31444455638
-
Novel 2D maps and coupling numbers for protein sequences. The first QSAR study of polygalacturonases; isolation and prediction of a novel sequence from Psidium guajava L
-
DOI 10.1016/j.febslet.2005.12.072, PII S0014579305015590
-
Agüero-Chapin, G.; Gonzalez-Diaz, H.; Molina, R.; Varona-Santos, J.; Uriarte, E.; Gonzalez-Diaz, Y. Novel 2D maps and coupling numbers for protein sequences. The first QSAR study of polygalacturonases; isolation and prediction of a novel sequence from Psidium guajava L. FEBS Lett. 2006, 580, 723-730 (Pubitemid 43152288)
-
(2006)
FEBS Letters
, vol.580
, Issue.3
, pp. 723-730
-
-
Aguero-Chapin, G.1
Gonzalez-Diaz, H.2
Molina, R.3
Varona-Santos, J.4
Uriarte, E.5
Gonzalez-Diaz, Y.6
-
35
-
-
35649026449
-
Network scaling invariants help to elucidate basic topological principles of proteins
-
DOI 10.1021/pr070162v
-
Krishnan, A.; Giuliani, A.; Zbilut, J. P.; Tomita, M. Network scaling invariants help to elucidate basic topological principles of proteins. J. Proteome Res. 2007, 6 (10), 3924-3934 (Pubitemid 350032556)
-
(2007)
Journal of Proteome Research
, vol.6
, Issue.10
, pp. 3924-3934
-
-
Krishnan, A.1
Giuliani, A.2
Zbilut, J.P.3
Tomita, M.4
-
36
-
-
33746837692
-
3D-QSAR study for DNA cleavage proteins with a potential anti-tumor ATCUN-like motif
-
DOI 10.1016/j.jinorgbio.2006.02.019, PII S0162013406000730
-
González-Díaz, H.; Sanchez-Gonzalez, A.; Gonzalez-Diaz, Y. 3DQSAR study for DNA cleavage proteins with a potential anti-tumor ATCUN-like motif. J. Inorg. Biochem. 2006, 100 (7), 1290-1297 (Pubitemid 44177489)
-
(2006)
Journal of Inorganic Biochemistry
, vol.100
, Issue.7
, pp. 1290-1297
-
-
Gonzalez-Diaz, H.1
Sanchez-Gonzalez, A.2
Gonzalez-Diaz, Y.3
-
37
-
-
34248201649
-
ANN-QSAR model for selection of anticancer leads from structurally heterogeneous series of compounds
-
DOI 10.1016/j.ejmech.2006.11.016, PII S0223523406004405
-
González-Díaz, H.; Bonet, I.; Terán, C.; de Clercq, E.; Bello, R.; García, M.; Santana, L.; Uriarte, E. ANN-QSAR model for selection of anticancer leads from structurally heterogeneous series of compounds. Eur. J. Med. Chem. 2007, 42, 580-585 (Pubitemid 46719486)
-
(2007)
European Journal of Medicinal Chemistry
, vol.42
, Issue.5
, pp. 580-585
-
-
Gonzalez-Diaz, H.1
Bonet, I.2
Teran, C.3
De Clercq, E.4
Bello, R.5
Garcia, M.M.6
Santana, L.7
Uriarte, E.8
-
38
-
-
44449088493
-
Unified QSAR approach to antimicrobials. Part 3: First multi-tasking QSAR model for Input-Coded prediction, structural back-projection, and complex networks clustering of antiprotozoal compounds
-
DOI 10.1016/j.bmc.2008.04.068, PII S0968089608003970
-
Prado-Prado, F. J.; González-Díaz, H.; Martinez de la Vega, O.; Ubeira, F. M.; Chou, K. C. Unified QSAR approach to antimicrobials. Part 3: First multi-tasking QSAR model for Input-Coded prediction, structural back-projection, and complex networks clustering of antiprotozoal compounds. Bioorg. Med. Chem. 2008, 16, 5871-5880 (Pubitemid 351766720)
-
(2008)
Bioorganic and Medicinal Chemistry
, vol.16
, Issue.11
, pp. 5871-5880
-
-
Prado-Prado, F.J.1
Gonzalez-Diaz, H.2
De La Vega, O.M.3
Ubeira, F.M.4
Chou, K.-C.5
-
39
-
-
50149119645
-
Enzymes/non-enzymes classification model complexity based on composition, sequence, 3D and topological indices
-
Munteanu, C. R.; Gonzalez-Diaz, H.; Magalhaes, A. L. Enzymes/non-enzymes classification model complexity based on composition, sequence, 3D and topological indices. J. Theor. Biol. 2008, 254 (2), 476-482
-
(2008)
J. Theor. Biol.
, vol.254
, Issue.2
, pp. 476-482
-
-
Munteanu, C.R.1
Gonzalez-Diaz, H.2
Magalhaes, A.L.3
-
40
-
-
52149090972
-
Natural/random protein classification models based on star network topological indices
-
Munteanu, C. R.; Gonzalez-Diaz, H.; Borges, F.; de Magalhaes, A. L. Natural/random protein classification models based on star network topological indices. J. Theor. Biol. 2008, 254 (4), 775-783
-
(2008)
J. Theor. Biol.
, vol.254
, Issue.4
, pp. 775-783
-
-
Munteanu, C.R.1
Gonzalez-Diaz, H.2
Borges, F.3
De Magalhaes, A.L.4
-
41
-
-
35548967965
-
Digital coding of amino acids based on hydrophobic index
-
Xiao, X.; Chou, K. C. Digital coding of amino acids based on hydrophobic index. Protein Pept. Lett. 2007, 14 (9), 871-875
-
(2007)
Protein Pept. Lett.
, vol.14
, Issue.9
, pp. 871-875
-
-
Xiao, X.1
Chou, K.C.2
-
42
-
-
32944461574
-
Using cellular automata images and pseudo amino acid composition to predict protein subcellular location
-
DOI 10.1007/s00726-005-0225-6
-
Xiao, X.; Shao, S.; Ding, Y.; Huang, Z.; Chou, K. C. Using cellular automata images and pseudo amino acid composition to predict protein subcellular location. Amino Acids 2006, 30 (1), 49-54. (Pubitemid 43261126)
-
(2006)
Amino Acids
, vol.30
, Issue.1
, pp. 49-54
-
-
Xiao, X.1
Shao, S.2
Ding, Y.3
Huang, Z.4
Chou, K.-C.5
-
43
-
-
0042121304
-
LOC3D: Annotate sub-cellular localization for protein structures
-
Nair, R.; Rost, B. LOC3D: annotate sub-cellular localization for protein structures. Nucleic Acids Res. 2003, 31 (13), 3337-3340
-
(2003)
Nucleic Acids Res.
, vol.31
, Issue.13
, pp. 3337-3340
-
-
Nair, R.1
Rost, B.2
-
44
-
-
0025021607
-
Review: Applications of graph theory to enzyme kinetics and protein folding kinetics. Steady and non-steady state systems
-
Chou, K. C. Review: Applications of graph theory to enzyme kinetics and protein folding kinetics. Steady and non-steady state systems. Biophys. Chem. 1990, 35, 1-24.
-
(1990)
Biophys. Chem.
, vol.35
, pp. 1-24
-
-
Chou, K.C.1
-
45
-
-
0024971003
-
Graphical rules in steady and non-steady enzyme kinetics
-
Chou, K. C. Graphical rules in steady and non-steady enzyme kinetics. J. Biol. Chem. 1989, 264, 12074-12079.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 12074-12079
-
-
Chou, K.C.1
-
46
-
-
0019021450
-
Graphical rules for enzyme-catalyzed rate laws
-
Chou, K. C.; Forsen, S. Graphical rules for enzyme-catalyzed rate laws. Biochem. J. 1980, 187, 829-835.
-
(1980)
Biochem. J.
, vol.187
, pp. 829-835
-
-
Chou, K.C.1
Forsen, S.2
-
47
-
-
0019413602
-
Graphical rules for non-steady state enzyme kinetics
-
Chou, K. C.; Liu, W. M. Graphical rules for non-steady state enzyme kinetics. J. Theor. Biol. 1981, 91 (4), 637-654
-
(1981)
J. Theor. Biol.
, vol.91
, Issue.4
, pp. 637-654
-
-
Chou, K.C.1
Liu, W.M.2
-
48
-
-
0026503888
-
Mixtures of tight-binding enzyme inhibitors. Kinetic analysis by a recursive rate equation
-
Kuzmic, P.; Ng, K. Y.; Heath, T. D. Mixtures of tight-binding enzyme inhibitors. Kinetic analysis by a recursive rate equation. Anal. Biochem. 1992, 200, 68-73.
-
(1992)
Anal. Biochem.
, vol.200
, pp. 68-73
-
-
Kuzmic, P.1
Ng, K.Y.2
Heath, T.D.3
-
49
-
-
0027462167
-
Steady-state kinetic studies with the non-nucleoside HIV-1 reverse transcriptase inhibitor U-87201E
-
Althaus, I. W.; Chou, J. J.; Gonzales, A. J.; Diebel, M. R.; Chou, K. C.; Kezdy, F. J.; Romero, D. L.; Aristoff, P. A.; Tarpley, W. G.; Reusser, F. Steady-state kinetic studies with the non-nucleoside HIV-1 reverse transcriptase inhibitor U-87201E. J. Biol. Chem. 1993, 268, 6119-6124. (Pubitemid 23981037)
-
(1993)
Journal of Biological Chemistry
, vol.268
, Issue.9
, pp. 6119-6124
-
-
Althaus, I.W.1
Chou, J.J.2
Gonzales, A.J.3
Deibel, M.R.4
Chou, K.-C.5
Kezdy, F.J.6
Romero, D.L.7
Aristoff, P.A.8
Tarpley, W.G.9
Reusser, F.10
-
50
-
-
0027236748
-
Kinetic studies with the non-nucleoside HIV-1 reverse transcriptase inhibitor U-88204E
-
Althaus, I. W.; Chou, J. J.; Gonzales, A. J.; Diebel, M. R.; Chou, K. C.; Kezdy, F. J.; Romero, D. L.; Aristoff, P. A.; Tarpley, W. G.; Reusser, F. Kinetic studies with the nonnucleoside HIV-1 reverse transcriptase inhibitor U-88204E. Biochemistry 1993, 32, 6548-6554. (Pubitemid 23217124)
-
(1993)
Biochemistry
, vol.32
, Issue.26
, pp. 6548-6554
-
-
Althaus, I.W.1
Chou, J.J.2
Gonzales, A.J.3
Deibel, M.R.4
Chou, K.-C.5
Kezdy, F.J.6
Romero, D.L.7
Palmer, J.R.8
Thomas, R.C.9
Aristoff, P.A.10
Tarpley, W.G.11
Reusser, F.12
-
51
-
-
0027957602
-
Steady-state kinetic studies with the polysulfonate U-9843, an HIv reverse transcriptase inhibitor
-
Althaus, I. W.; Chou, J. J.; Gonzales, A. J.; LeMay, R. J.; Deibel, M. R.; Chou, K. C.; Kezdy, F. J.; Romero, D. L.; Thomas, R. C.; Aristoff, P. A. Steady-state kinetic studies with the polysulfonate U-9843, an HIV reverse transcriptase inhibitor. Experientia 1994, 50 (1), 23-28 (Pubitemid 24038333)
-
(1994)
Experientia
, vol.50
, Issue.1
, pp. 23-28
-
-
Althaus, I.W.1
Chou, J.J.2
Gonzales, A.J.3
Lemay, R.J.4
Deibel, M.R.5
Chou, K.-C.6
Kezdy, F.J.7
Romero, D.L.8
Thomas, R.C.9
Aristoff, P.A.10
Tarpley, W.G.11
Reusser, F.12
-
52
-
-
0029981307
-
The benzylthio-pyrimidine U-31,355, a potent inhibitor of HIV-1 reverse transcriptase
-
DOI 10.1016/0006-2952(95)02390-9
-
Althaus, I. W.; Chou, K. C.; Lemay, R. J.; Franks, K. M.; Deibel, M. R.; Kezdy, F. J.; Resnick, L.; Busso, M. E.; So, A. G.; Downey, K. M.; Romero, D. L.; Thomas, R. C.; Aristoff, P. A.; Tarpley, W. G.; Reusser, F. The benzylthio-pyrimidine U-31,355, a potent inhibitor of HIV-1 reverse transcriptase. Biochem. Pharmacol. 1996, 51 (6), 743-750 (Pubitemid 26094445)
-
(1996)
Biochemical Pharmacology
, vol.51
, Issue.6
, pp. 743-750
-
-
Althaus, I.W.1
Chou, K.-C.2
Lemay, R.J.3
Franks, K.M.4
Deibel, M.R.5
Kezdy, F.J.6
Resnick, L.7
Busso, M.E.8
So, A.G.9
Downey, K.M.10
Romero, D.L.11
Thomas, R.C.12
Aristoff, P.A.13
Tarpley, W.G.14
Reusser, F.15
-
53
-
-
0028071544
-
Review: Steady-state inhibition kinetics of processive nucleic acid polymerases and nucleases
-
Chou, K. C.; Kezdy, F. J.; Reusser, F. Review: Steady-state inhibition kinetics of processive nucleic acid polymerases and nucleases. Anal. Biochem. 1994, 221, 217-230.
-
(1994)
Anal. Biochem.
, vol.221
, pp. 217-230
-
-
Chou, K.C.1
Kezdy, F.J.2
Reusser, F.3
-
54
-
-
36249019849
-
New 3D graphical representation of DNA sequence based on dual nucleotides
-
DOI 10.1016/j.jtbi.2007.08.025, PII S0022519307004122
-
Qi, X. Q.; Wen, J.; Qi, Z. H. New 3D graphical representation of DNA sequence based on dual nucleotides. J. Theor. Biol. 2007, 249 (4), 681-690 (Pubitemid 350122598)
-
(2007)
Journal of Theoretical Biology
, vol.249
, Issue.4
, pp. 681-690
-
-
Qi, X.-Q.1
Wen, J.2
Qi, Z.-H.3
-
55
-
-
0029671141
-
Do "antisense proteins" exist
-
Chou, K. C.; Zhang, C. T.; Elrod, D. W. Do "antisense proteins" exist. J. Protein Chem. 1996, 15 (1), 59-61.
-
(1996)
J. Protein Chem.
, vol.15
, Issue.1
, pp. 59-61
-
-
Chou, K.C.1
Zhang, C.T.2
Elrod, D.W.3
-
56
-
-
0027054450
-
Diagrammatization of codon usage in 339 HIV proteins and its biological implication
-
Chou, K. C.; Zhang, C. T. Diagrammatization of codon usage in 339 HIV proteins and its biological implication. AIDS Res. Hum. Retroviruses 1992, 8, 1967-1976
-
(1992)
AIDS Res. Hum. Retroviruses
, vol.8
, pp. 1967-1976
-
-
Chou, K.C.1
Zhang, C.T.2
-
57
-
-
0028237028
-
Analysis of codon usage in 1562, E. Coli protein coding sequences
-
Zhang, C. T.; Chou, K. C.; Analysis of codon usage in 1562, E. Coli protein coding sequences. J. Mol. Biol. 1994, 238, 1-8.
-
(1994)
J. Mol. Biol.
, vol.238
, pp. 1-8
-
-
Zhang, C.T.1
Chou, K.C.2
-
58
-
-
4043133700
-
Markovian Backbone Negentropies: Molecular descriptors for protein research. I. Predicting protein stability in Arc repressor mutants
-
Ramos de Armas, R.; González-Díaz, H.; Molina, R.; Uriarte, E. Markovian Backbone Negentropies: Molecular descriptors for protein research. I. Predicting protein stability in Arc repressor mutants. Proteins 2004, 56 (4), 715-723
-
(2004)
Proteins
, vol.56
, Issue.4
, pp. 715-723
-
-
Ramos De Armas, R.1
González-Díaz, H.2
Molina, R.3
Uriarte, E.4
-
59
-
-
17444397734
-
Biopolymer stochastic moments. I. Modeling human rhinovirus cellular recognition with protein surface electrostatic moments
-
DOI 10.1002/bip.20234
-
González-Díaz, H.; Uriarte, E. Biopolymer stochastic moments. I. Modeling human rhinovirus cellular recognition with protein surface electrostatic moments. Biopolymers 2005, 77 (5), 296-303. (Pubitemid 40546902)
-
(2005)
Biopolymers
, vol.77
, Issue.5
, pp. 296-303
-
-
Gonzalez-Diaz, H.1
Uriarte, E.2
-
60
-
-
12444269951
-
Unified Markov thermodynamics based on stochastic forms to classify drugs considering molecular structure, partition system, and biological species:: Distribution of the antimicrobial G1 on rat tissues
-
DOI 10.1016/j.bmcl.2004.11.059, PII S0960894X04014179
-
González-Díaz, H.; Aguero, G.; Cabrera, M. A.; Molina, R.; Santana, L.; Uriarte, E.; Delogu, G.; Castanedo, N. Unified Markov thermodynamics based on stochastic forms to classify drugs considering molecular structure, partition system, and biological species: distribution of the antimicrobial G1 on rat tissues. Bioorg. Med. Chem. Lett. 2005, 15 (3), 551-557 (Pubitemid 40143123)
-
(2005)
Bioorganic and Medicinal Chemistry Letters
, vol.15
, Issue.3
, pp. 551-557
-
-
Gonzalez-Diaz, H.1
Aguero, G.2
Cabrera, M.A.3
Molina, R.4
Santana, L.5
Uriarte, E.6
Delogu, G.7
Castanedo, N.8
-
61
-
-
12844277442
-
Predicting multiple drugs side effects with a general drug-target interaction thermodynamic Markov model
-
DOI 10.1016/j.bmc.2004.11.030, PII S0968089604009101
-
González-Díaz, H.; Cruz-Monteagudo, M.; Molina, R.; Tenorio, E.; Uriarte, E. Predicting multiple drugs side effects with a general drug-target interaction thermodynamic Markov model. Bioorg. Med. Chem. 2005, 13 (4), 1119-1129 (Pubitemid 40164596)
-
(2005)
Bioorganic and Medicinal Chemistry
, vol.13
, Issue.4
, pp. 1119-1129
-
-
Gonzalez-Diaz, H.1
Cruz-Monteagudo, M.2
Molina, R.3
Tenorio, E.4
Uriarte, E.5
-
62
-
-
23644443075
-
Recognition of stable protein mutants with 3D stochastic average electrostatic potentials
-
DOI 10.1016/j.febslet.2005.06.065, PII S001457930500815X
-
Gonzalez-Diaz, H.; Molina, R.; Uriarte, E. Recognition of stable protein mutants with 3D stochastic average electrostatic potentials. FEBS Lett. 2005, 579 (20), 4297-4301 (Pubitemid 41116355)
-
(2005)
FEBS Letters
, vol.579
, Issue.20
, pp. 4297-4301
-
-
Gonzalez-Diaz, H.1
Molina, R.2
Uriarte, E.3
-
63
-
-
33645291006
-
Stochastic molecular descriptors for polymers. 3. Markov electrostatic moments as polymer 2D-folding descriptors: RNA-QSAR for mycobacterial promoters
-
DOI 10.1016/j.polymer.2005.04.104, PII S0032386105006373
-
González-Díaz, H.; Pérez-Bello, A.; Uriarte, E. Stochastic molecular descriptors for polymers. 3. Markov electrostatic moments as polymer 2D-folding descriptors: RNA-QSAR for mycobacterial promoters. Polymer 2005, 46, 6461-6473 (Pubitemid 41021703)
-
(2005)
Polymer
, vol.46
, Issue.17
, pp. 6461-6473
-
-
Gonzalez-Diaz, H.1
Perez-Bello, A.2
Uriarte, E.3
-
64
-
-
0142239233
-
Stochastic Processes in Physics, Chemistry, and Biology
-
Springer-Verlag: Berlin, Germany
-
Freund, J. A.; Poschel, T. Stochastic Processes in Physics, Chemistry, and Biology. In Lecture Notes in Physics; Springer-Verlag: Berlin, Germany, 2000.
-
(2000)
Lecture Notes in Physics
-
-
Freund, J.A.1
Poschel, T.2
-
65
-
-
10444231203
-
Predicting stability of Arc repressor mutants with protein stochastic moments
-
DOI 10.1016/j.bmc.2004.10.024, PII S0968089604008120
-
González-Díaz, H.; Uriarte, E.; Ramos de Armas, R. Predicting stability of Arc repressor mutants with protein stochastic moments. Bioorg. Med. Chem. 2005, 13 (2), 323-331 (Pubitemid 39642916)
-
(2005)
Bioorganic and Medicinal Chemistry
, vol.13
, Issue.2
, pp. 323-331
-
-
Gonzalez-Diaz, H.1
Uriarte, E.2
Ramos De Armas, R.3
-
66
-
-
0030739477
-
NMR structure of neuromedin C, a neurotransmitter with an amino terminal Cu(II)-, Ni(II)-binding (ATCUN) motif
-
Gasmi, G.; Singer, A.; Forman-Kay, J.; Sarkar, B. NMR structure of neuromedin C, a neurotransmitter with an amino terminal CuII-,NiII-binding (ATCUN) motif. J Pept Res 1997, 49 (6), 500-509 (Pubitemid 27334994)
-
(1997)
Journal of Peptide Research
, vol.49
, Issue.6
, pp. 500-509
-
-
Gasmi, G.1
Singer, A.2
Forman-Kay, J.3
Sarkar, B.4
-
67
-
-
29644443875
-
Inactivation of human angiotensin converting enzyme by copper peptide complexes containing ATCUN motifs
-
Gokhale, N. H.; Cowan, J. A. Inactivation of human angiotensin converting enzyme by copper peptide complexes containing ATCUN motifs. Chem Commun (Camb) 2005, (47), 5916-5918
-
(2005)
Chem Commun (Camb)
, Issue.47
, pp. 5916-5918
-
-
Gokhale, N.H.1
Cowan, J.A.2
-
68
-
-
65649117326
-
Identification of centrarchid hepcidins and evidence that 17beta-estradiol disrupts constitutive expression of hepcidin-1 and inducible expression of hepcidin-2 in largemouth bass (Micropterus salmoides)
-
Robertson, L. S.; Iwanowicz, L. R.; Marranca, J. M. Identification of centrarchid hepcidins and evidence that 17beta-estradiol disrupts constitutive expression of hepcidin-1 and inducible expression of hepcidin-2 in largemouth bass (Micropterus salmoides). Fish Shellfish Immunol 2009, 26 (6), 898-907.
-
(2009)
Fish Shellfish Immunol
, vol.26
, Issue.6
, pp. 898-907
-
-
Robertson, L.S.1
Iwanowicz, L.R.2
Marranca, J.M.3
-
69
-
-
18144386946
-
Proteins Markovian 3D-QSAR with spherically-truncated average electrostatic potentials
-
DOI 10.1016/j.bmc.2005.03.041
-
Saiz-Urra, L.; González-Díaz, H.; Uriarte, E. Proteins Markovian 3D-QSAR with spherically-truncated average electrostatic potentials. Bioorg. Med. Chem. 2005, 13 (11), 3641-3647 (Pubitemid 40615916)
-
(2005)
Bioorganic and Medicinal Chemistry
, vol.13
, Issue.11
, pp. 3641-3647
-
-
Saiz-Urra, L.1
Gonzalez-Diaz, H.2
Uriarte, E.3
-
70
-
-
2342498249
-
Stochastic molecular descriptors for polymers. 1. Modelling the properties of icosahedral viruses with 3D-Markovian negentropies
-
DOI 10.1016/j.polymer.2004.03.071, PII S0032386104003271
-
González-Díaz, H.; Molina, R. R.; Uriarte, E. Stochastic molecular descriptors for polymers. 1. Modelling the properties of icosahedral viruses with 3D-Markovian negentropies. Polymer 2003, (45), 3845-3853 (Pubitemid 38595163)
-
(2004)
Polymer
, vol.45
, Issue.11
, pp. 3845-3853
-
-
Gonzalez Diaz, H.1
Molina, R.2
Uriarte, E.3
-
71
-
-
8544220400
-
Markov entropy backbone electrostatic descriptors for predicting proteins biological activity
-
DOI 10.1016/j.bmcl.2004.06.100, PII S0960894X04008765
-
González-Díaz, H.; Molina, R.; Uriarte, E. Markov entropy backbone electrostatic descriptors for predicting proteins biological activity. Bioorg. Med. Chem. Lett. 2004, 14 (18), 4691-4695 (Pubitemid 39490290)
-
(2004)
Bioorganic and Medicinal Chemistry Letters
, vol.14
, Issue.18
, pp. 4691-4695
-
-
Gonzalez-Diaz, H.1
Molina, R.2
Uriarte, E.3
-
72
-
-
14844364760
-
Stochastic molecular descriptors for polymers. 2. Spherical truncation of electrostatic interactions on entropy based polymers 3D-QSAR
-
DOI 10.1016/j.polymer.2005.01.066, PII S003238610500114X
-
González-Díaz, H.; Saíz-Urra, L.; Molina, R.; Uriarte, E. Stochastic molecular descriptors for polymers. 2. Spherical truncation of electrostatic interactions on entropy based polymers 3D-QSAR. Polymer 2005, 46, 2791-2798 (Pubitemid 40353705)
-
(2005)
Polymer
, vol.46
, Issue.8
, pp. 2791-2798
-
-
Gonzalez-Diaz, H.1
Saiz-Urra, L.2
Molina, R.3
Uriarte, E.4
-
73
-
-
0033954256
-
The Protein Data Bank
-
Berman, H. M.; Westbrook, J.; Feng, Z.; Gilliland, G.; Bhat, T. N.; Weissig, H.; Shindyalov, I. N.; Bourne, P. E. The Protein Data Bank. Nucleic Acids Res. 2000, 28, 235-242
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
74
-
-
17444367861
-
-
version 1.0, contact information: gonzalezdiazh@yahoo.es or qohumbe@usc.es2005
-
González-Díaz, H.; Molina, R., BIOMARKS version 1.0, contact information: gonzalezdiazh@yahoo.es or qohumbe@usc.es2005.
-
BIOMARKS
-
-
González-Díaz, H.1
Molina, R.2
-
75
-
-
0842282077
-
How a repulsive charge distribution becomes attractive and stabilized by a polarizable protein dielectric
-
Kundu, S.; Gupta-Bhaya, P. How a repulsive charge distribution becomes attractive and stabilized by a polarizable protein dielectric. J. Mol. Struct. (Theochem) 2004, 668.
-
(2004)
J. Mol. Struct. (Theochem)
, pp. 668
-
-
Kundu, S.1
Gupta-Bhaya, P.2
-
76
-
-
3142570534
-
On the origin of the electrostatic barrier for proton transport in aquaporin
-
DOI 10.1016/j.febslet.2004.06.020, PII S0014579304007410
-
Burykin, A.; Warshel, A. On the origin of the electrostatic barrier for proton transport in aquaporin. FEBS Lett. 2004, 570 (1-3), 41-46 (Pubitemid 38900953)
-
(2004)
FEBS Letters
, vol.570
, Issue.1-3
, pp. 41-46
-
-
Burykin, A.1
Warshel, A.2
-
77
-
-
0033850287
-
On the truncation of long-range electrostatic interactions in DNA
-
Norberg, J.; Nilsson, L. On the truncation of long-range electrostatic interactions in DNA. Biophys. J. 2000, 79 (3), 1537-1553 (Pubitemid 30677070)
-
(2000)
Biophysical Journal
, vol.79
, Issue.3
, pp. 1537-1553
-
-
Norberg, J.1
Nilsson, L.2
-
78
-
-
1242272756
-
Conformational and structural analysis of the equilibrium between single- and double-strand beta-helix of a D, L-alternating oligonorleucine
-
Navarro, E.; Fenude, E.; Celda, B. Conformational and structural analysis of the equilibrium between single- and double-strand beta-helix of a D, L-alternating oligonorleucine. Biopolymers 2004, 73 (2), 229-241
-
(2004)
Biopolymers
, vol.73
, Issue.2
, pp. 229-241
-
-
Navarro, E.1
Fenude, E.2
Celda, B.3
-
79
-
-
11144307952
-
Linear free energy relationship for 4-substituted (o-phenylenediamine) platinum(II) dichloride derivatives using quantum mechanical descriptors
-
DOI 10.1016/j.jinorgbio.2004.11.017, PII S016201340400371X
-
Costa, L. A.; Rocha, W. R.; De Almeida, W. B.; Dos Santos, H. F. Linear free energy relationship for 4-substituted (o-phenylenediamine) platinum(II) dichloride derivatives using quantum mechanical descriptors. J. Inorg. Biochem. 2005, 99 (2), 575-583 (Pubitemid 40038330)
-
(2005)
Journal of Inorganic Biochemistry
, vol.99
, Issue.2
, pp. 575-583
-
-
Costa, L.A.S.1
Rocha, W.R.2
De Almeida, W.B.3
Dos Santos, H.F.4
-
80
-
-
1542712870
-
TOPS-MODE versus DRAGON descriptors to predict permeability coefficients through low-density polyethylene
-
Perez Gonzalez, M.; Morales Helguera, A. TOPS-MODE versus DRAGON descriptors to predict permeability coefficients through low-density polyethylene. J. Comput. Aided Mol. Des. 2003, 17 (10), 665-672
-
(2003)
J. Comput. Aided Mol. Des.
, vol.17
, Issue.10
, pp. 665-672
-
-
Perez Gonzalez, M.1
Morales Helguera, A.2
-
81
-
-
15244343496
-
Atom, atom-type, and total nonstochastic and stochastic quadratic fingerprints: A promising approach for modeling of antibacterial activity
-
Marrero-Ponce, Y.; Medina-Marrero, R.; Torrens, F.; Martinez, Y.; Romero-Zaldivar, V.; Castro, E. A. Atom, atom-type, and total nonstochastic and stochastic quadratic fingerprints: a promising approach for modeling of antibacterial activity. Bioorg. Med. Chem. 2005, 13 (8), 2881-2899
-
(2005)
Bioorg. Med. Chem.
, vol.13
, Issue.8
, pp. 2881-2899
-
-
Marrero-Ponce, Y.1
Medina-Marrero, R.2
Torrens, F.3
Martinez, Y.4
Romero-Zaldivar, V.5
Castro, E.A.6
-
82
-
-
12844261737
-
Non-stochastic and stochastic linear indices of the 'molecular pseudograph's atom adjacency matrix': Application to 'in silico' studies for the rational discovery of new antimalarial compounds
-
Marrero-Ponce, Y.; Montero-Torres, A.; Zaldivar, C. R.; Veitia, M. I.; Perez, M. M.; Sanchez, R. N. Non-stochastic and stochastic linear indices of the 'molecular pseudograph's atom adjacency matrix': application to 'in silico' studies for the rational discovery of new antimalarial compounds. Bioorg. Med. Chem. 2005, 13 (4), 1293-1304
-
(2005)
Bioorg. Med. Chem.
, vol.13
, Issue.4
, pp. 1293-1304
-
-
Marrero-Ponce, Y.1
Montero-Torres, A.2
Zaldivar, C.R.3
Veitia, M.I.4
Perez, M.M.5
Sanchez, R.N.6
-
84
-
-
0001833451
-
Chemometric methods in molecular design
-
Manhnhold, R., Krogsgaard-Larsen, P., Timmerman, H., Van Waterbeemd, H., Eds.; Wiley-VCH: New York
-
Van Waterbeemd, H., Chemometric methods in molecular design. In Method and Principles in Medicinal Chemistry; Manhnhold, R., Krogsgaard-Larsen, P., Timmerman, H., Van Waterbeemd, H., Eds.; Wiley-VCH: New York, 1995; Vol.2, pp 283-293
-
(1995)
Method and Principles in Medicinal Chemistry
, vol.2
, pp. 283-293
-
-
Van Waterbeemd, H.1
-
85
-
-
30344455624
-
Stochastic entropy QSAR for the in silico discovery of anticancer compounds: Prediction, synthesis, and in vitro assay of new purine carbanucleosides
-
DOI 10.1016/j.bmc.2005.09.039, PII S0968089605008965
-
González-Díaz, H.; Vina, D.; Santana, L.; de Clercq, E.; Uriarte, E. Stochastic entropy QSAR for the in silico discovery of anticancer compounds: prediction, synthesis, and in vitro assay of new purine carbanucleosides. Bioorg. Med. Chem. 2006, 14 (4), 1095-1107 (Pubitemid 43059801)
-
(2006)
Bioorganic and Medicinal Chemistry
, vol.14
, Issue.4
, pp. 1095-1107
-
-
Gonzalez-Diaz, H.1
Vina, D.2
Santana, L.3
De Clercq, E.4
Uriarte, E.5
-
87
-
-
0043132440
-
Methods for reliability and uncertainty assessment and for applicability evaluations of classification- and regression-based QSARs
-
Eriksson, L.; Jaworska, J.; Worth, A. P.; Cronin, M. T.; McDowell, R. M.; Gramatica, P. Methods for reliability and uncertainty assessment and for applicability evaluations of classification- and regression-based QSARs. Environ. Health Perspect. 2003, 111 (10), 1361-1375
-
(2003)
Environ. Health Perspect.
, vol.111
, Issue.10
, pp. 1361-1375
-
-
Eriksson, L.1
Jaworska, J.2
Worth, A.P.3
Cronin, M.T.4
McDowell, R.M.5
Gramatica, P.6
-
88
-
-
0013370796
-
Local overfitting control via leverages
-
Monari, G.; Dreyfus, G. Local overfitting control via leverages. Neural Comput. 2002, 14 (6), 1481-1506
-
(2002)
Neural Comput.
, vol.14
, Issue.6
, pp. 1481-1506
-
-
Monari, G.1
Dreyfus, G.2
-
89
-
-
33846564328
-
Reliability and uncertainty in the estimation of pKa by least squares nonlinear regression analysis of multiwavelength spectrophotometric pH titration data
-
Meloun, M.; Syrovy, T.; Bordovska, S.; Vrana, A. Reliability and uncertainty in the estimation of pKa by least squares nonlinear regression analysis of multiwavelength spectrophotometric pH titration data. Anal. Bioanal. Chem. 2007, 387 (3), 941-955
-
(2007)
Anal. Bioanal. Chem.
, vol.387
, Issue.3
, pp. 941-955
-
-
Meloun, M.1
Syrovy, T.2
Bordovska, S.3
Vrana, A.4
-
90
-
-
33645069394
-
A metal-binding site is present in the amino terminal region of the bioactive iron regulator hepcidin-25
-
Melino, S.; Garlando, L.; Patamia, M.; Paci, M.; Petruzzelli, R. A metal-binding site is present in the amino terminal region of the bioactive iron regulator hepcidin-25. J. Pept. Res. 2005, 66 (s1), 65-71.
-
(2005)
J. Pept. Res.
, vol.66
, Issue.S1
, pp. 65-71
-
-
Melino, S.1
Garlando, L.2
Patamia, M.3
Paci, M.4
Petruzzelli, R.5
-
91
-
-
30844438338
-
Structural basis for double-stranded RNA processing by Dicer
-
Macrae, I. J.; Zhou, K.; Li, F.; Repic, A.; Brooks, A. N.; Cande, W. Z.; Adams, P. D.; Doudna, J. A. Structural basis for double-stranded RNA processing by Dicer. Science 2006, 311 (5758), 195-198
-
(2006)
Science
, vol.311
, Issue.5758
, pp. 195-198
-
-
Macrae, I.J.1
Zhou, K.2
Li, F.3
Repic, A.4
Brooks, A.N.5
Cande, W.Z.6
Adams, P.D.7
Doudna, J.A.8
-
92
-
-
33947595016
-
Apo and calciumbound crystal structures of Alpha-11 giardin, an unusual annexin from Giardia lamblia
-
Pathuri, P.; Nguyen, E. T.; Svard, S. G.; Luecke, H. Apo and calciumbound crystal structures of Alpha-11 giardin, an unusual annexin from Giardia lamblia. J. Mol. Biol. 2007, 368 (2), 493-508.
-
(2007)
J. Mol. Biol.
, vol.368
, Issue.2
, pp. 493-508
-
-
Pathuri, P.1
Nguyen, E.T.2
Svard, S.G.3
Luecke, H.4
-
93
-
-
58149333150
-
Apo and calcium-bound crystal structures of cytoskeletal protein alpha-14 giardin (annexin E1) from the intestinal protozoan parasite Giardia lamblia
-
Pathuri, P.; Nguyen, E. T.; Ozorowski, G.; Svard, S. G.; Luecke, H. Apo and calcium-bound crystal structures of cytoskeletal protein alpha-14 giardin (annexin E1) from the intestinal protozoan parasite Giardia lamblia. J. Mol. Biol. 2009, 385 (4), 1098-1112
-
(2009)
J. Mol. Biol.
, vol.385
, Issue.4
, pp. 1098-1112
-
-
Pathuri, P.1
Nguyen, E.T.2
Ozorowski, G.3
Svard, S.G.4
Luecke, H.5
-
94
-
-
53149089456
-
Structural insights into membrane targeting by the flagellar calcium-binding protein (FCaBP), a myristoylated and palmitoylated calcium sensor in Trypanosoma cruzi
-
Wingard, J. N.; Ladner, J.; Vanarotti, M.; Fisher, A. J.; Robinson, H.; Buchanan, K. T.; Engman, D. M.; Ames, J. B. Structural insights into membrane targeting by the flagellar calcium-binding protein (FCaBP), a myristoylated and palmitoylated calcium sensor in Trypanosoma cruzi. J. Biol. Chem. 2008, 283 (34), 23388-23396
-
(2008)
J. Biol. Chem.
, vol.283
, Issue.34
, pp. 23388-23396
-
-
Wingard, J.N.1
Ladner, J.2
Vanarotti, M.3
Fisher, A.J.4
Robinson, H.5
Buchanan, K.T.6
Engman, D.M.7
Ames, J.B.8
-
95
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F.; Gish, W.; Miller, W.; Myers, E. W.; Lipman, D. J. Basic local alignment search tool. J. Mol. Biol. 1990, 215 (3), 403-410
-
(1990)
J. Mol. Biol.
, vol.215
, Issue.3
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
96
-
-
9644283060
-
Predicting enzyme class from protein structure without alignments
-
Dobson, P. D.; Doig, A. J. Predicting enzyme class from protein structure without alignments. J. Mol. Biol. 2005, 345 (1), 187-199
-
(2005)
J. Mol. Biol.
, vol.345
, Issue.1
, pp. 187-199
-
-
Dobson, P.D.1
Doig, A.J.2
-
97
-
-
11144251770
-
Thrombin: A paradigm for enzymes allosterically activated by monovalent cations
-
Di Cera, E. Thrombin: a paradigm for enzymes allosterically activated by monovalent cations. C R Biol. 2004, 327 (12), 1065-1076
-
(2004)
C R Biol.
, vol.327
, Issue.12
, pp. 1065-1076
-
-
Di Cera, E.1
-
98
-
-
0029926326
-
+ binding sites
-
DOI 10.1006/jmbi.1996.0081
-
Nayal, M.; Di Cera, E. Valence screening of water in protein crystals reveals potential Na+ binding sites. J. Mol. Biol. 1996, 256 (2), 228-234 (Pubitemid 26105587)
-
(1996)
Journal of Molecular Biology
, vol.256
, Issue.2
, pp. 228-234
-
-
Nayal, M.1
Di Cera, E.2
|