-
2
-
-
42449155111
-
The evolution of gene collectives: How natural selection drives chemical innovation
-
Fischbach MA, Walsh CT, Clardy J (2008) The evolution of gene collectives: How natural selection drives chemical innovation. Proc Natl Acad Sci U S A 105: 4601-4608.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 4601-4608
-
-
Fischbach, M.A.1
Walsh, C.T.2
Clardy, J.3
-
3
-
-
0032793852
-
Selfish operons: The evolutionary impact of gene clustering in prokaryotes and eukaryotes
-
Lawrence J (1999) Selfish operons: the evolutionary impact of gene clustering in prokaryotes and eukaryotes. Curr Opin Genet Dev 9: 642-648.
-
(1999)
Curr Opin Genet Dev
, vol.9
, pp. 642-648
-
-
Lawrence, J.1
-
4
-
-
0034780910
-
Horizontal gene transfer in prokaryotes: Quantification and classification
-
Koonin EV, Makarova KS, Aravind L (2001) Horizontal gene transfer in prokaryotes: quantification and classification. Annu Rev Microbiol 55: 709-742.
-
(2001)
Annu Rev Microbiol
, vol.55
, pp. 709-742
-
-
Koonin, E.V.1
Makarova, K.S.2
Aravind, L.3
-
5
-
-
0032227324
-
Evolution of the clusters of genes for beta-lactam antibiotics: A model for evolutive combinatorial assembly of new beta-lactams
-
Liras P, Rodriguez-Garcia A, Martin JF (1998) Evolution of the clusters of genes for beta-lactam antibiotics: a model for evolutive combinatorial assembly of new beta-lactams. Int Microbiol 1: 271-278.
-
(1998)
Int Microbiol
, vol.1
, pp. 271-278
-
-
Liras, P.1
Rodriguez-Garcia, A.2
Martin, J.F.3
-
6
-
-
20444417098
-
Evolution of beta-lactam biosynthesis genes and recruitment of trans-acting factors
-
Brakhage AA, Al-Abdallah Q, Tuncher A, Sprote P (2005) Evolution of beta-lactam biosynthesis genes and recruitment of trans-acting factors. Phytochemistry 66: 1200-1210.
-
(2005)
Phytochemistry
, vol.66
, pp. 1200-1210
-
-
Brakhage, A.A.1
Al-Abdallah, Q.2
Tuncher, A.3
Sprote, P.4
-
8
-
-
0036731845
-
Molecular evolution of aromatic polyketides and comparative sequence analysis of polyketide ketosynthase and 16S ribosomal DNA genes from various streptomyces species
-
Metsa-Ketela M, Halo L, Munukka E, Hakala J, Mantsala P, et al. (2002) Molecular evolution of aromatic polyketides and comparative sequence analysis of polyketide ketosynthase and 16S ribosomal DNA genes from various streptomyces species. Appl Environ Microbiol 68: 4472-4479.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 4472-4479
-
-
Metsa-Ketela, M.1
Halo, L.2
Munukka, E.3
Hakala, J.4
Mantsala, P.5
-
9
-
-
0347635514
-
Phylogenetic evidence for the early evolution of microcystin synthesis
-
Rantala A, Fewer DP, Hisbergues M, Rouhiainen L, Vaitomaa J, et al. (2004) Phylogenetic evidence for the early evolution of microcystin synthesis. Proc Natl Acad Sci U S A 101: 568-573.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 568-573
-
-
Rantala, A.1
Fewer, D.P.2
Hisbergues, M.3
Rouhiainen, L.4
Vaitomaa, J.5
-
10
-
-
36649038371
-
Comparison of cyanopeptolin genes in Planktothrix, Microcystis, and Anabaena strains: Evidence for independent evolution within each genus
-
Rounge TB, Rohrlack T, Tooming-Klunderud A, Kristensen T, Jakobsen KS (2007) Comparison of cyanopeptolin genes in Planktothrix, Microcystis, and Anabaena strains: evidence for independent evolution within each genus. Appl Environ Microbiol 73: 7322-7330.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 7322-7330
-
-
Rounge, T.B.1
Rohrlack, T.2
Tooming-Klunderud, A.3
Kristensen, T.4
Jakobsen, K.S.5
-
11
-
-
33645540155
-
Selective cytotoxic activity of valinomycin against HT-29 Human colon carcinoma cells via down-regulation of GRP78
-
Ryoo IJ, Park HR, Choo SJ, Hwang JH, Park YM, et al. (2006) Selective cytotoxic activity of valinomycin against HT-29 Human colon carcinoma cells via down-regulation of GRP78. Biol Pharm Bull 29: 817-820.
-
(2006)
Biol Pharm Bull
, vol.29
, pp. 817-820
-
-
Ryoo, I.J.1
Park, H.R.2
Choo, S.J.3
Hwang, J.H.4
Park, Y.M.5
-
12
-
-
33644924869
-
Deciphering the biosynthetic codes for the potent anti-SARS-CoV cyclodepsipeptide valinomycin in Streptomyces tsusimaensis ATCC 15141
-
Cheng YQ (2006) Deciphering the biosynthetic codes for the potent anti-SARS-CoV cyclodepsipeptide valinomycin in Streptomyces tsusimaensis ATCC 15141. Chembiochem 7: 471-477.
-
(2006)
Chembiochem
, vol.7
, pp. 471-477
-
-
Cheng, Y.Q.1
-
13
-
-
33747799012
-
Characterization of the cereulide NRPS alpha-hydroxy acid specifying modules: Activation of alpha-keto acids and chiral reduction on the assembly line
-
Magarvey NA, Ehling-Schulz M, Walsh CT (2006) Characterization of the cereulide NRPS alpha-hydroxy acid specifying modules: activation of alpha-keto acids and chiral reduction on the assembly line. J Am Chem Soc 128: 10698-10699.
-
(2006)
J Am Chem Soc
, vol.128
, pp. 10698-10699
-
-
Magarvey, N.A.1
Ehling-Schulz, M.2
Walsh, C.T.3
-
14
-
-
0028233630
-
A novel dodecadepsipeptide, cereulide, isolated from Bacillus cereus causes vacuole formation in HEp-2 cells
-
Agata N, Mori M, Ohta M, Suwan S, Ohtani I, et al. (1994) A novel dodecadepsipeptide, cereulide, isolated from Bacillus cereus causes vacuole formation in HEp-2 cells. FEMS Microbiol Lett 121: 31-34.
-
(1994)
FEMS Microbiol Lett
, vol.121
, pp. 31-34
-
-
Agata, N.1
Mori, M.2
Ohta, M.3
Suwan, S.4
Ohtani, I.5
-
15
-
-
27744566586
-
Cereulide-producing strains of Bacillus cereus show diversity
-
Apetroaie C, Andersson MA, Sproer C, Tsitko I, Shaheen R, et al. (2005) Cereulide-producing strains of Bacillus cereus show diversity. Arch Microbiol 184: 141-151.
-
(2005)
Arch Microbiol
, vol.184
, pp. 141-151
-
-
Apetroaie, C.1
Andersson, M.A.2
Sproer, C.3
Tsitko, I.4
Shaheen, R.5
-
16
-
-
33646699589
-
Cereulide synthetase gene cluster from emetic Bacillus cereus: Structure and location on a mega virulence plasmid related to Bacillus anthracis toxin plasmid pXO1
-
Ehling-Schulz M, Fricker M, Grallert H, Rieck P, Wagner M, et al. (2006) Cereulide synthetase gene cluster from emetic Bacillus cereus: structure and location on a mega virulence plasmid related to Bacillus anthracis toxin plasmid pXO1. BMC Microbiol 6: 20.
-
(2006)
BMC Microbiol
, vol.6
, pp. 20
-
-
Ehling-Schulz, M.1
Fricker, M.2
Grallert, H.3
Rieck, P.4
Wagner, M.5
-
17
-
-
33845931409
-
Complete sequence analysis of novel plasmids from emetic and periodontal Bacillus cereus isolates reveals a common evolutionary history among the B. cereus-group plasmids, including Bacillus anthracis pXO1
-
Rasko DA, Rosovitz MJ, Okstad OA, Fouts DE, Jiang L, et al. (2007) Complete sequence analysis of novel plasmids from emetic and periodontal Bacillus cereus isolates reveals a common evolutionary history among the B. cereus-group plasmids, including Bacillus anthracis pXO1. J Bacteriol 189: 52-64.
-
(2007)
J Bacteriol
, vol.189
, pp. 52-64
-
-
Rasko, D.A.1
Rosovitz, M.J.2
Okstad, O.A.3
Fouts, D.E.4
Jiang, L.5
-
18
-
-
0003421005
-
-
Sunderland, MA: Sinauer Associates, Inc
-
Li W-H (1997) Molecular Evolution. Sunderland, MA: Sinauer Associates, Inc.
-
(1997)
Molecular Evolution
-
-
Li, W.-H.1
-
19
-
-
0003671904
-
-
Hillis DM, Moritz C, Mable BK, editors , 2nd ed. Sunderland, MA: Sinauer Associates, Inc
-
Hillis DM, Moritz C, Mable BK, editors (1996) Molecular Systematics. 2nd ed. Sunderland, MA: Sinauer Associates, Inc.
-
(1996)
Molecular Systematics
-
-
-
20
-
-
0036221248
-
When does the incongruence length difference test fail?
-
Darlu P, Lecointre G (2002) When does the incongruence length difference test fail? Mol Biol Evol 19: 432-437.
-
(2002)
Mol Biol Evol
, vol.19
, pp. 432-437
-
-
Darlu, P.1
Lecointre, G.2
-
21
-
-
0037046560
-
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)
-
Bentley SD, Chater KF, Cerdeno-Tarraga AM, Challis GL, Thomson NR, et al. (2002) Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2). Nature 417: 141-147.
-
(2002)
Nature
, vol.417
, pp. 141-147
-
-
Bentley, S.D.1
Chater, K.F.2
Cerdeno-Tarraga, A.M.3
Challis, G.L.4
Thomson, N.R.5
-
22
-
-
0035004572
-
Retrieval and on-the-fly alignment of sequence fragments from the HIV database
-
Gaschen B, Kuiken C, Korber B, Foley B (2001) Retrieval and on-the-fly alignment of sequence fragments from the HIV database. Bioinformatics 17: 415-418.
-
(2001)
Bioinformatics
, vol.17
, pp. 415-418
-
-
Gaschen, B.1
Kuiken, C.2
Korber, B.3
Foley, B.4
-
23
-
-
0025365294
-
Streptomyces genes involved in biosynthesis of the peptide antibiotic valinomycin
-
Perkins JB, Guterman SK, Howitt CL, Williams VE, 2nd, Pero J (1990) Streptomyces genes involved in biosynthesis of the peptide antibiotic valinomycin. J Bacteriol 172: 3108-3116.
-
(1990)
J Bacteriol
, vol.172
, pp. 3108-3116
-
-
Perkins, J.B.1
Guterman, S.K.2
Howitt, C.L.3
Williams 2nd, V.E.4
Pero, J.5
-
25
-
-
0030951704
-
Molecular detection of streptomycin-producing streptomycetes in Brazilian soils
-
Huddleston AS, Cresswell N, Neves MC, Beringer JE, Baumberg S, et al. (1997) Molecular detection of streptomycin-producing streptomycetes in Brazilian soils. Appl Environ Microbiol 63: 1288-1297.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 1288-1297
-
-
Huddleston, A.S.1
Cresswell, N.2
Neves, M.C.3
Beringer, J.E.4
Baumberg, S.5
-
26
-
-
0031766997
-
The mitochondrial toxin produced by Streptomyces griseus strains isolated from an indoor environment is valinomycin
-
Andersson MA, Mikkola R, Kroppenstedt RM, Rainey FA, Peltola J, et al. (1998) The mitochondrial toxin produced by Streptomyces griseus strains isolated from an indoor environment is valinomycin. Appl Environ Microbiol 64: 4767-4773.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 4767-4773
-
-
Andersson, M.A.1
Mikkola, R.2
Kroppenstedt, R.M.3
Rainey, F.A.4
Peltola, J.5
-
27
-
-
31544448331
-
Microbial biogeography: Putting microorganisms on the map
-
Martiny JB, Bohannan BJ, Brown JH, Colwell RK, Fuhrman JA, et al. (2006) Microbial biogeography: putting microorganisms on the map. Nat Rev Microbiol 4: 102-112.
-
(2006)
Nat Rev Microbiol
, vol.4
, pp. 102-112
-
-
Martiny, J.B.1
Bohannan, B.J.2
Brown, J.H.3
Colwell, R.K.4
Fuhrman, J.A.5
-
28
-
-
0035173584
-
Three R's of bacterial evolution: How replication, repair, and recombination frame the origin of species
-
Brown EW, LeClerc JE, Kotewicz ML, Cebula TA (2001) Three R's of bacterial evolution: how replication, repair, and recombination frame the origin of species. Environ Mol Mutagen 38: 248-260.
-
(2001)
Environ Mol Mutagen
, vol.38
, pp. 248-260
-
-
Brown, E.W.1
LeClerc, J.E.2
Kotewicz, M.L.3
Cebula, T.A.4
-
29
-
-
0032170134
-
Evidence for transfer of antibiotic-resistance genes in soil populations of streptomycetes
-
Wiener P, Egan S, Huddleston AS, Wellington EM (1998) Evidence for transfer of antibiotic-resistance genes in soil populations of streptomycetes. Mol Ecol 7: 1205-1216.
-
(1998)
Mol Ecol
, vol.7
, pp. 1205-1216
-
-
Wiener, P.1
Egan, S.2
Huddleston, A.S.3
Wellington, E.M.4
-
30
-
-
0003869903
-
-
Norwich, England: John Innes Foundation
-
Kieser T, Bibb MJ, Buttner MJ, Chater KF, Hopwood DA (2000) Practical Streptomyces Genetics. Norwich, England: John Innes Foundation.
-
(2000)
Practical Streptomyces Genetics
-
-
Kieser, T.1
Bibb, M.J.2
Buttner, M.J.3
Chater, K.F.4
Hopwood, D.A.5
-
31
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
32
-
-
0031350056
-
NEXUS: An extensible file format for systematic information
-
Maddison DR, Swofford DL, Maddison WP (1997) NEXUS: an extensible file format for systematic information. Syst Biol 46: 590-621.
-
(1997)
Syst Biol
, vol.46
, pp. 590-621
-
-
Maddison, D.R.1
Swofford, D.L.2
Maddison, W.P.3
-
34
-
-
13444304367
-
The Ribosomal Database Project (RDP-II): Sequences and tools for high-throughput rRNA analysis
-
Cole JR, Chai B, Farris RJ, Wang Q, Kulam SA, et al. (2005) The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis. Nucleic Acids Res 33: D294-296.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Cole, J.R.1
Chai, B.2
Farris, R.J.3
Wang, Q.4
Kulam, S.A.5
-
38
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck JP, Ronquist F (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
39
-
-
50049101204
-
-
distributed by the author. Evolutionary Biology Centre, Uppsala University
-
Nylander JA (2004) MrModelTest v2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.
-
(2004)
MrModelTest v2. Program
-
-
Nylander, J.A.1
-
40
-
-
0019797407
-
Evolutionary trees from DNA sequences: A maximum likelihood approach
-
Felsenstein J (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17: 368-376.
-
(1981)
J Mol Evol
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
43
-
-
0031851853
-
GCUA: General codon usage analysis
-
McInerney JO (1998) GCUA: general codon usage analysis. Bioinformatics 14: 372-373.
-
(1998)
Bioinformatics
, vol.14
, pp. 372-373
-
-
McInerney, J.O.1
-
44
-
-
70349633545
-
Method of controlling rice blast
-
US Patent no. 3,365,363
-
Nishimura H (1968) Method of controlling rice blast. US Patent no. 3,365,363.
-
(1968)
-
-
Nishimura, H.1
-
45
-
-
0347699167
-
Amidomycin, a new antibiotic from a streptomyces species; production, isolation, assay, and biological properties
-
Taber WA, Vining LC (1957) Amidomycin, a new antibiotic from a streptomyces species; production, isolation, assay, and biological properties. Can J Microbiol 3: 953-965.
-
(1957)
Can J Microbiol
, vol.3
, pp. 953-965
-
-
Taber, W.A.1
Vining, L.C.2
-
46
-
-
0033135623
-
Antineoplastic agents. Part 409: Isolation and structure of montanastatin from a terrestrial actinomycete
-
Pettit GR, Tan R, Melody N, Kielty JM, Pettit RK, et al. (1999) Antineoplastic agents. Part 409: Isolation and structure of montanastatin from a terrestrial actinomycete. Bioorg Med Chem 7: 895-899.
-
(1999)
Bioorg Med Chem
, vol.7
, pp. 895-899
-
-
Pettit, G.R.1
Tan, R.2
Melody, N.3
Kielty, J.M.4
Pettit, R.K.5
-
47
-
-
84981758158
-
Valinomycin I. XXVII. Mittail über Antibiotica aus Actinomyceten.
-
Brockmann H, Schmidt-Kastner G (1955) Valinomycin I. XXVII. Mittail über Antibiotica aus Actinomyceten. Chem Ber 88: 57-61.
-
(1955)
Chem Ber
, vol.88
, pp. 57-61
-
-
Brockmann, H.1
Schmidt-Kastner, G.2
-
48
-
-
33845716400
-
A54556 antibiotics and process for production thereof
-
US Patent no. 4,492,650. USA
-
Michel KH, Kastner RE (1985) A54556 antibiotics and process for production thereof. US Patent no. 4,492,650. USA.
-
(1985)
-
-
Michel, K.H.1
Kastner, R.E.2
|