Retrieval and on-the-fly alignment of sequence fragments from the HIV database

Bioinformatics

Volumn 17, Issue 5, 2001, Pages 415-418

  Gaschen, Brian ^a   Kuiken, Carla ^a   Korber, Bette ^a   Foley, Brian ^a  

^a LOS ALAMOS NATIONAL LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GLYCOPROTEIN GP 120; VIRUS ENVELOPE PROTEIN;

ARTICLE; COMPUTER PROGRAM; CONTROLLED STUDY; DATA BASE; GENE SEQUENCE; GENETIC CODE; HUMAN IMMUNODEFICIENCY VIRUS 1; INTERNET; MODEL; PARAMETER; PRIORITY JOURNAL;

HUMAN IMMUNODEFICIENCY VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; RNA VIRUSES;

EID: 0035004572     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/17.5.415     Document Type: Article

References (4)

1. Eddy, S.R. (1995) Multiple alignment using hidden Markov models. ISMB, 3, 114-120.
2. Eddy, S. (1998) HMMER User's Guide: biological sequence analysis using profile hidden Markov models. St Louis, MO: Washington University School of Medicine.
3. Eddy, S.R., Mitchison, G. and Durbin, R. (1995) Maximum discrimination hidden Markov models of sequence consensus. J. Comput. Biol., 2, 9-23.
4. Higgins, D.G., Thompson, J.D. and Gibson, T.J. (1996) Using CLUSTAL for multiple sequence alignments. Meth. Enzymol., 266, 383-402.